Lsi04G001650 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G001650
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCharged multivesicular body protein, putative
Locationchr04 : 1826846 .. 1829922 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTTCATACTAGCATAGGATCGGGTGCAGGTGAATATTTTTTCCATTAGTCTTCTCCTTTCTTCTCTGAACGATCCAAGAAAAAGAGAGAGCAAACGAAGAGATTCTCATCGCGATCTTCCCACTGAAACAAAATTCTCATTTTGGAGGGTTTTTCTTCCACATTTCGGCGTCGTTTCTCGTCTCTGCAAGTTAATCGACGTCGAATTGCTCCATTTTTGCGGCAGTGAAGGAATAGGAAGAAGAACAGAAAGATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCTCCTTCTATTCAAGATGCCTCCGATAGGGTAATCGTTACAATTTTTGTTATCTAGGGTTTTGATTTTCTGTTGGAAAGAATCGGTTGCTTCTCTTTCGTCGAATTCGTTTGTTTCAATTGGGGTTGAGCGTTCTGTATTGTTTCGTTTTCAGATTAATAAAAGAGGCGAATCAGTTGATGATAAAATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGACCTGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCAATGAGGGTTCTAAAGCAAAAACGAATGTATGTTCCCTTCGTGCCACCGCCCCTTTTTGTTACTTTTCTTGAAATTCTTTCGTGCTACATGTGCATATGATTAACCTTCACATTCTTTTAATCAAAAAGTAGTTTGGCTTGGAGATCTGGCAGAAGCCTGTTGTTAAGGTGTTCGAATTTCAAGGCACATATATTTACTTAGCCATTTTTCCTTGGGGGGGTTTCTGTCTAACTTTGACCTATAATCTTATGACTATGAGCTTCTGTTTTTTTCCCTGTGGTCTTGTTGTTATAGCTCCATGTCAGTCTTTATCTTTTCCCTCTGGTTGTACTTATTTTACCTGCTCCTAGTTAACTGTTAGGTTCTCAGCAATCCTGTGTCTTCTTTTTTCCAGAAATCCTTAAACTATGATAGTTTAACAAATCTTTTCTATGGTAGAAAGCTTGTAGATTTTAATGCTTGATGGCGAACTGATTAGAAGACTGGAAACTCGTCTGACTACAATTGGATTGGGATTATTTTGTTCCAAACTTGAAATTGTTCGCTGTGCTATGTATTATTACTTTCTCTTGTTTACTATCGGAATGGTTATTAAGATATTTCTTATGGTTTTGAACAGGTATGAAGGACAACGTGACATGCTGTACAATCAGACATTTAACCTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGGTAACATCTGTTGAATATTTTTGTGATTGTTAGTCTTCTCATTTTCTGTCCCCCAAAAGGAAAAAGAAAAAAAATTATAAAAATTGAGCCTTCCATGGCAGATTTGGACTTAAAGTTTTAATTTTAGATCAAGGAAATCATAGGTTTGGAAAGGGGAAATAATTGGCTTACTTGCTTGCTTAATGATTGTTTGACTAGATATCCCGCATTTAAGTTTGTGTTTATTATACGTGGGTCAGATGACCAAGAAATCTGGGTTGAGGTAATTCCTATTAATGCATCAGTTAATTCTTGCCAAAAATTTGTTTTCTTGGTAGCAAGTACAGAGTTCAGGGCAGTTCAGGTGGAGCTTTGTCTGTCTAATTGGAACCTGCTGCCTACCTCGTGAGAGAACGAGGTAGGGGACAAACATCTGTCATTAGGAAGGCATTTCTTGAAGTTCAATAAAATTCTATCTAGATTCTCTTATGGTTCTTCCTAATATCAGTTTAGCTTATAATGTGGATTGATATCCTGGTTGCATTTATTCAATCAAAATAGGAGAGGAACCTTATCTGTCAAACTAACCTTGTTTTGTATCTTCCAGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACGTCAGTAGCAATCAACTCTTGTTAGTATCCTTAGTTTTATTCTGGCATTTGTTGAGTGGTTTTGTGTTGCCTGCAGAACTTACAAGATGAAATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGGTAAGATTACTGCATTTAAATGCTCAATTTTGATGAAATATGGCACCCGAGCCCTAGGAATCTTACACCTTTACTACTTTTTTGGATTATAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCGGACAAGGAATCTGATTTAGAAGGAGAGCTGAACTTGCCTGCAGCTCCTACAGGGCATGCAGCAGTTCCTGCTGGCAGAACCAATGCACAGGTAATGATCGTTGAAACCCTGGATCCAACTTCTTGGAGTCAATAATCACAAACTTATTCGTTTTGAAAAAGTGATCGTGATGAAATATTATTTAGATCTACAGGATGCATGTTAATGCAAACACCATTTTCCTTTCTTTCTTGAGAATATCACCGTGTAGTTTTCTATGAATTGCATCTATTAACAAGAAGTTACCTATGTCTGTTCAAGAGAATGCCAGGATCCATCCGTTGTCTATCCAAACGAGTTCTTTCTTTTTCACTTGTTGCCTGCTCTAAATTGCCTAGTGTTTTCGACACCATTTTATTTCACATTTTGTTCTTTTATATGCATTGAGTTATATCCTAAATTTGATGCGCAGGCCGTGGATGAATTAGGTTTACCTGCTGTTCCTCGCGCATCCCTTCGAGGCTAAGAGTTACACTTGGCTCACCTGACCATCTTTTCTGGGAGCTGTTGGAGGGAACCTTTGTATACATGTTGTGCAGAGCTTATATTTGATTCATATATAAATAGATTGTCATTCATCTTTTGAGTACCTGCATTTGGAATTGTTCCTCCAGGCAATCTGAAATCTTTGGCTCAAACTATATATAGGCACATTCTTGGTATCATTCTTTTCTGTCTGTTGACATTTCATAATTTATAATTTATAGTTTATATGCCAGATGAATCTGTTCTATAATCTGTTCT

mRNA sequence

GTTTCATACTAGCATAGGATCGGGTGCAGGTGAATATTTTTTCCATTAGTCTTCTCCTTTCTTCTCTGAACGATCCAAGAAAAAGAGAGAGCAAACGAAGAGATTCTCATCGCGATCTTCCCACTGAAACAAAATTCTCATTTTGGAGGGTTTTTCTTCCACATTTCGGCGTCGTTTCTCGTCTCTGCAAGTTAATCGACGTCGAATTGCTCCATTTTTGCGGCAGTGAAGGAATAGGAAGAAGAACAGAAAGATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCTCCTTCTATTCAAGATGCCTCCGATAGGATTAATAAAAGAGGCGAATCAGTTGATGATAAAATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGACCTGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCAATGAGGGTTCTAAAGCAAAAACGAATGTATGAAGGACAACGTGACATGCTGTACAATCAGACATTTAACCTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACAACTTACAAGATGAAATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCGGACAAGGAATCTGATTTAGAAGGAGAGCTGAACTTGCCTGCAGCTCCTACAGGGCATGCAGCAGTTCCTGCTGGCAGAACCAATGCACAGGCCGTGGATGAATTAGGTTTACCTGCTGTTCCTCGCGCATCCCTTCGAGGCTAAGAGTTACACTTGGCTCACCTGACCATCTTTTCTGGGAGCTGTTGGAGGGAACCTTTGTATACATGTTGTGCAGAGCTTATATTTGATTCATATATAAATAGATTGTCATTCATCTTTTGAGTACCTGCATTTGGAATTGTTCCTCCAGGCAATCTGAAATCTTTGGCTCAAACTATATATAGGCACATTCTTGGTATCATTCTTTTCTGTCTGTTGACATTTCATAATTTATAATTTATAGTTTATATGCCAGATGAATCTGTTCTATAATCTGTTCT

Coding sequence (CDS)

ATGAAGAGGGTTTTTGGTGTCAAGAAAGACAAAGAACCGCCTCCTTCTATTCAAGATGCCTCCGATAGGATTAATAAAAGAGGCGAATCAGTTGATGATAAAATAAAGAAGCTTGATGTTGAACTCAGTAGATATAAGGAGCAGATCAAGAAAACGAGACCTGGTCCAGCTCAAGAAGCTGTTAAAGCTCGAGCAATGAGGGTTCTAAAGCAAAAACGAATGTATGAAGGACAACGTGACATGCTGTACAATCAGACATTTAACCTAGATCAAGTTGCATTTGCCTCGGAGGGCATTAAAGATGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACAACTTACAAGATGAAATGATGGATCTGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTACCTGATGACATTGATGAGGATGAACTTTTGGGTGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCGGACAAGGAATCTGATTTAGAAGGAGAGCTGAACTTGCCTGCAGCTCCTACAGGGCATGCAGCAGTTCCTGCTGGCAGAACCAATGCACAGGCCGTGGATGAATTAGGTTTACCTGCTGTTCCTCGCGCATCCCTTCGAGGCTAA

Protein sequence

MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG
Homology
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BLAST of Lsi04G001650 vs. Swiss-Prot
Match: CHMP5_RAT (Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.7e-44
Identity = 110/233 (47.21%), Postives = 144/233 (61.80%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R FG  K K PPPS+ D    ++ R ES+D KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQA--VDELGLPAVP 232
           AD   SY        L+   + PA P G   VP    N     VDE GLP +P
Sbjct: 181 ADEDSSY--------LDEAASAPAIPEG---VPTDTKNKDGVLVDEFGLPQIP 217

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BLAST of Lsi04G001650 vs. Swiss-Prot
Match: CHMP5_MOUSE (Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=1 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.7e-44
Identity = 110/233 (47.21%), Postives = 144/233 (61.80%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R FG  K K PPPS+ D    ++ R ES+D KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ D+M+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQA--VDELGLPAVP 232
           AD   SY        L+   + PA P G   VP    N     VDE GLP +P
Sbjct: 181 ADEDSSY--------LDEAASAPAIPEG---VPTDTKNKDGVLVDEFGLPQIP 217

[Close]
BLAST of Lsi04G001650 vs. Swiss-Prot
Match: CHMP5_DANRE (Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.4e-44
Identity = 103/231 (44.59%), Postives = 142/231 (61.47%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPP++ D    ++ R ESVD KI +LD EL +YK+Q+KK R GP++  
Sbjct: 1   MNRIFGRGKPKGPPPNLTDCISGVDSRAESVDKKIARLDAELMKYKDQMKKMRDGPSKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +AMRVLKQKRMYEGQRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKAMRVLKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ D+M+ +NE+QE L RSY  P +IDED+L  ELDAL  ++     
Sbjct: 121 KNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTP-EIDEDDLEAELDALGDEL----- 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVP 232
                  L  D  S L+   + PA P G         +   VDE GLP +P
Sbjct: 181 -------LLDDDNSYLDEASSAPAIPEGAPGDRTTNRDGVLVDEFGLPQIP 218

[Close]
BLAST of Lsi04G001650 vs. Swiss-Prot
Match: CHMP5_PONAB (Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 109/233 (46.78%), Postives = 144/233 (61.80%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPPS+ D    ++ R ES+D KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ D+M+ +NEIQE L RSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQA--VDELGLPAVP 232
           AD   SY        L+   + PA P G   VP    N     VDE GLP +P
Sbjct: 181 ADEDSSY--------LDEAASAPAIPEG---VPTDTKNKDGVLVDEFGLPQIP 217

[Close]
BLAST of Lsi04G001650 vs. Swiss-Prot
Match: CHMP5_HUMAN (Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.7e-43
Identity = 109/233 (46.78%), Postives = 144/233 (61.80%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPPS+ D    ++ R ES+D KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ D+M+ +NEIQE L RSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQA--VDELGLPAVP 232
           AD   SY        L+   + PA P G   VP    N     VDE GLP +P
Sbjct: 181 ADEDSSY--------LDEAASAPAIPEG---VPTDTKNKDGVLVDEFGLPQIP 217

[Close]
BLAST of Lsi04G001650 vs. TrEMBL
Match: A0A0A0KWL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613490 PE=3 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 1.2e-120
Identity = 232/237 (97.89%), Postives = 232/237 (97.89%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESD EGELNLPAAP GHAAVPAGR NAQA DELGLPAVP ASLRG
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLRG 237

[Close]
BLAST of Lsi04G001650 vs. TrEMBL
Match: M5XHS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010749mg PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.8e-113
Identity = 214/237 (90.30%), Postives = 231/237 (97.47%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPS+ DAS+RINKRGE+VD+KIKKLD+EL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKEKEPPPSVGDASERINKRGETVDEKIKKLDIELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDE++L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLMGELDALEADMGLETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESDL+ EL+LP+AP GHAA PAGR+NAQA DELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDELGLPAVPRASLRG 237

[Close]
BLAST of Lsi04G001650 vs. TrEMBL
Match: B9RXZ5_RICCO (Charged multivesicular body protein, putative OS=Ricinus communis GN=RCOM_1305670 PE=3 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 3.1e-113
Identity = 215/237 (90.72%), Postives = 227/237 (95.78%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDKEPPPSIQDASDRINK+G+SVDDKIKKLD EL+RY+EQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSIQDASDRINKKGDSVDDKIKKLDAELTRYREQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYN+PDDIDE+EL+GELDALEADMG E E
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNIPDDIDEEELMGELDALEADMGLEIE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
            DGVPSYLQPDKE DL+ ELNLP+APTG AA PAGR NAQA DELGLPAVPRAS+RG
Sbjct: 181 GDGVPSYLQPDKEPDLDSELNLPSAPTGQAAGPAGRNNAQAEDELGLPAVPRASIRG 237

[Close]
BLAST of Lsi04G001650 vs. TrEMBL
Match: V7BIB2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G137700g PE=3 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 4.4e-112
Identity = 215/237 (90.72%), Postives = 225/237 (94.94%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPSIQDASDRI KRG++V+DKIKKLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKNKEPPPSIQDASDRITKRGDTVEDKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQV FASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDEL+GELDALE DMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELMGELDALELDMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKE DLE ELNLP APTG  AVP GR+NAQ+ DELGLPAVPRAS+RG
Sbjct: 181 ADGVPSYLQPDKEPDLEAELNLPPAPTGQTAVPPGRSNAQSEDELGLPAVPRASIRG 237

[Close]
BLAST of Lsi04G001650 vs. TrEMBL
Match: A0A151T123_CAJCA (Charged multivesicular body protein 5 OS=Cajanus cajan GN=KK1_023109 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 1.3e-111
Identity = 212/237 (89.45%), Postives = 228/237 (96.20%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+K+PPP+IQDA+DRI KRG++V++KIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKNKDPPPTIQDANDRITKRGDTVEEKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQKRMYEGQRDMLYNQTFNLDQV FASEGIKDAQQTMSALK+ANKELKGMM
Sbjct: 61  IKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFASEGIKDAQQTMSALKTANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESDLE ELNLP+AP+G  AVP GR+NAQ  DELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDLEAELNLPSAPSGQTAVPPGRSNAQTEDELGLPAVPRASLRG 237

[Close]
BLAST of Lsi04G001650 vs. TAIR10
Match: AT3G10640.1 (AT3G10640.1 SNF7 family protein)

HSP 1 Score: 386.7 bits (992), Expect = 1.0e-107
Identity = 200/237 (84.39%), Postives = 221/237 (93.25%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KK+ EPPPSIQDASDRINKRG+SV+DKIKKLDVEL +YKEQ+KKTRPGPAQEA
Sbjct: 1   MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADG+PSYLQPD E+D + ELNLPAAPTGH   P GR  AQA DE GLPAVPRASLRG
Sbjct: 181 ADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEFGLPAVPRASLRG 235

[Close]
BLAST of Lsi04G001650 vs. TAIR10
Match: AT5G04850.2 (AT5G04850.2 SNF7 family protein)

HSP 1 Score: 353.2 bits (905), Expect = 1.2e-97
Identity = 194/274 (70.80%), Postives = 217/274 (79.20%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +KEPPPSIQDASDRINKRG+SV++K+K+LD EL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGE------------- 180
           KTV+IQDIDNLQD+MMDLMD S+EIQETLGRSYNVPDDIDED+LLG              
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGGKFFLCSLCCLSLG 180

Query: 181 ---------LDA---------------LEADMGFETEADGVPSYLQPDKESDLEGELNLP 238
                    L++               LEADMG ETEADGVPSYLQPDKE DL  ELNLP
Sbjct: 181 LVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLP 240

[Close]
BLAST of Lsi04G001650 vs. TAIR10
Match: AT4G29160.1 (AT4G29160.1 SNF7 family protein)

HSP 1 Score: 78.2 bits (191), Expect = 7.7e-15
Identity = 71/231 (30.74%), Postives = 105/231 (45.45%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDK----IKKLDVELSRYKEQIKKTRPGP 60
           M R+FG  K K+   ++Q   D++N+  E ++ K    +KK   E+ + KE  +      
Sbjct: 2   MNRLFG--KPKQEANALQTL-DKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKN--- 61

Query: 61  AQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKEL 120
                K  A++ LK+KR+YEGQ + L N    +       EG K   +T+ AL+S    +
Sbjct: 62  -----KRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAM 121

Query: 121 KGMMKTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMG 180
           K M K   I D+D   DE+ +  +   +IQE L        D DEDEL  ELD LE++  
Sbjct: 122 KAMQKATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESE-- 181

Query: 181 FETEADGVPSYLQPDKESDLEGELNLPAA---PTGHAAVPAGRTNAQAVDE 225
                             +LE +L  PA    P     VPAGR  A+ V +
Sbjct: 182 ------------------ELESQLLQPATTAPPLPSVPVPAGRQPARPVPQ 201

[Close]
BLAST of Lsi04G001650 vs. TAIR10
Match: AT2G19830.1 (AT2G19830.1 SNF7 family protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-11
Identity = 55/172 (31.98%), Postives = 90/172 (52.33%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K+   ++Q   D++N+  E ++   KK +V L +   +++K +     + 
Sbjct: 3   MNRLFG--KPKQETSTLQTL-DKLNETLEMLE---KKENVLLKKATGEVEKAKEFSRAKN 62

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
            +A A++ LK+KR+YE Q + L N    +       EG K   +T+ AL++    +K M 
Sbjct: 63  KRA-AIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQ 122

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALE 173
           K   I D+D   DE+ +  +   +IQE L   +   +D DEDEL  ELD LE
Sbjct: 123 KATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELEAELDELE 166

[Close]
BLAST of Lsi04G001650 vs. NCBI nr
Match: gi|659091801|ref|XP_008446740.1| (PREDICTED: charged multivesicular body protein 5 [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 4.4e-121
Identity = 233/237 (98.31%), Postives = 233/237 (98.31%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESD EGELNLPAAP GHAAVPAGR NAQA DELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG 237

[Close]
BLAST of Lsi04G001650 vs. NCBI nr
Match: gi|449434524|ref|XP_004135046.1| (PREDICTED: charged multivesicular body protein 5 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 1.7e-120
Identity = 232/237 (97.89%), Postives = 232/237 (97.89%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESD EGELNLPAAP GHAAVPAGR NAQA DELGLPAVP ASLRG
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLRG 237

[Close]
BLAST of Lsi04G001650 vs. NCBI nr
Match: gi|747060833|ref|XP_011076863.1| (PREDICTED: charged multivesicular body protein 5-like [Sesamum indicum])

HSP 1 Score: 419.5 bits (1077), Expect = 4.0e-114
Identity = 215/237 (90.72%), Postives = 229/237 (96.62%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDKEPPPS+QDASDRINKRGE+VD+KIKKLD EL+RY+EQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSVQDASDRINKRGETVDEKIKKLDAELARYREQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQVAFA+EGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQE+LGRSYNVPDDIDEDEL+GELDALEADMGFETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQESLGRSYNVPDDIDEDELMGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
            DGVPSYLQPD+E DLE ELNLP+AP+GHA VPAGR N QA DELGLPAVPRASLRG
Sbjct: 181 GDGVPSYLQPDREPDLESELNLPSAPSGHAPVPAGRANVQAEDELGLPAVPRASLRG 237

[Close]
BLAST of Lsi04G001650 vs. NCBI nr
Match: gi|470142773|ref|XP_004307072.1| (PREDICTED: charged multivesicular body protein 5-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 418.3 bits (1074), Expect = 8.9e-114
Identity = 215/237 (90.72%), Postives = 231/237 (97.47%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFG KKDKEPPPSI DASDRINKRG++VD+KIKKLDVEL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGAKKDKEPPPSIGDASDRINKRGDTVDEKIKKLDVELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSY+VPDDIDE+EL+GELDALEADMG ET+
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYSVPDDIDEEELMGELDALEADMGMETK 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           +DGVPSYLQPD+ESD++GELNLP+AP GHAAVPAGRTN QA DELGLPAVPRA+LRG
Sbjct: 181 SDGVPSYLQPDRESDIDGELNLPSAPIGHAAVPAGRTNGQAEDELGLPAVPRATLRG 237

[Close]
BLAST of Lsi04G001650 vs. NCBI nr
Match: gi|596210163|ref|XP_007223847.1| (hypothetical protein PRUPE_ppa010749mg [Prunus persica])

HSP 1 Score: 416.8 bits (1070), Expect = 2.6e-113
Identity = 214/237 (90.30%), Postives = 231/237 (97.47%), Query Frame = 1 

Query: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPS+ DAS+RINKRGE+VD+KIKKLD+EL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKEKEPPPSVGDASERINKRGETVDEKIKKLDIELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDE++L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLMGELDALEADMGLETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPAAPTGHAAVPAGRTNAQAVDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESDL+ EL+LP+AP GHAA PAGR+NAQA DELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDELGLPAVPRASLRG 237

The following BLAST results are available for this feature:
BLAST of Lsi04G001650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHMP5_RAT5.7e-4447.21Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1[more]
CHMP5_MOUSE5.7e-4447.21Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=1 SV=1[more]
CHMP5_DANRE7.4e-4444.59Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1[more]
CHMP5_PONAB1.7e-4346.78Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1[more]
CHMP5_HUMAN1.7e-4346.78Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1[more]
BLAST of Lsi04G001650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWL4_CUCSA1.2e-12097.89Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613490 PE=3 SV=1[more]
M5XHS3_PRUPE1.8e-11390.30Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010749mg PE=3 SV=1[more]
B9RXZ5_RICCO3.1e-11390.72Charged multivesicular body protein, putative OS=Ricinus communis GN=RCOM_130567... [more]
V7BIB2_PHAVU4.4e-11290.72Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G137700g PE=3 SV=1[more]
A0A151T123_CAJCA1.3e-11189.45Charged multivesicular body protein 5 OS=Cajanus cajan GN=KK1_023109 PE=3 SV=1[more]
BLAST of Lsi04G001650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10640.11.0e-10784.39 SNF7 family protein[more]
AT5G04850.21.2e-9770.80 SNF7 family protein[more]
AT4G29160.17.7e-1530.74 SNF7 family protein[more]
AT2G19830.11.8e-1131.98 SNF7 family protein[more]
BLAST of Lsi04G001650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091801|ref|XP_008446740.1|4.4e-12198.31PREDICTED: charged multivesicular body protein 5 [Cucumis melo][more]
gi|449434524|ref|XP_004135046.1|1.7e-12097.89PREDICTED: charged multivesicular body protein 5 [Cucumis sativus][more]
gi|747060833|ref|XP_011076863.1|4.0e-11490.72PREDICTED: charged multivesicular body protein 5-like [Sesamum indicum][more]
gi|470142773|ref|XP_004307072.1|8.9e-11490.72PREDICTED: charged multivesicular body protein 5-like [Fragaria vesca subsp. ves... [more]
gi|596210163|ref|XP_007223847.1|2.6e-11390.30hypothetical protein PRUPE_ppa010749mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G001650.1Lsi04G001650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 12..209
score: 1.2
NoneNo IPR availableunknownCoilCoilcoord: 99..119
score: -coord: 128..148
scor
NoneNo IPR availablePANTHERPTHR22761SNF7 - RELATEDcoord: 1..236
score: 7.7E
NoneNo IPR availablePANTHERPTHR22761:SF17SUBFAMILY NOT NAMEDcoord: 1..236
score: 7.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G001650Csa5G613490Cucumber (Chinese Long) v2culsiB368
Lsi04G001650CSPI05G26150Wild cucumber (PI 183967)cpilsiB372
Lsi04G001650Cucsa.282770Cucumber (Gy14) v1cgylsiB465
Lsi04G001650CmaCh18G009600Cucurbita maxima (Rimu)cmalsiB379
Lsi04G001650CmaCh04G014460Cucurbita maxima (Rimu)cmalsiB669
Lsi04G001650CmoCh04G015180Cucurbita moschata (Rifu)cmolsiB660
Lsi04G001650CmoCh18G009610Cucurbita moschata (Rifu)cmolsiB364
Lsi04G001650Cla020475Watermelon (97103) v1lsiwmB312
Lsi04G001650MELO3C012333Melon (DHL92) v3.5.1lsimeB281
Lsi04G001650ClCG05G021950Watermelon (Charleston Gray)lsiwcgB283
Lsi04G001650MELO3C012333.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G001650Cla97C05G103660Watermelon (97103) v2lsiwmbB284
Lsi04G001650Bhi07G000618Wax gourdlsiwgoB387
Lsi04G001650Cp4.1LG01g14230Cucurbita pepo (Zucchini)cpelsiB352
Lsi04G001650Cp4.1LG09g03570Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G001650CsGy5G025610Cucumber (Gy14) v2cgyblsiB337
Lsi04G001650Carg01893Silver-seed gourdcarlsiB767
Lsi04G001650Carg19003Silver-seed gourdcarlsiB960
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G001650Watermelon (Charleston Gray)lsiwcgB300
Lsi04G001650Watermelon (97103) v1lsiwmB289
Lsi04G001650Cucumber (Chinese Long) v3cuclsiB393
Lsi04G001650Bottle gourd (USVL1VR-Ls)lsilsiB152
Lsi04G001650Cucurbita maxima (Rimu)cmalsiB684
Lsi04G001650Cucurbita moschata (Rifu)cmolsiB676
Lsi04G001650Cucurbita pepo (Zucchini)cpelsiB365