Carg19003 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19003
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	charged multivesicular body protein 5
Location	Cucurbita_argyrosperma_scaffold_115 : 151277 .. 153726 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCGTCTCTTTTTTATGAACGCTCCAAGAAACGGTAAGGAGTTTCTCATCGCGATTTTTCCAGTGAAAGCAAATTCTCTCTCAGGGGATTTTCCTCCACATTCCGGCGTTGTTCATCGTCTCTGAAAGTTAATCGACGTCGAACTGCTCCATCTTTGCGGCAGCGTAGGAAGAGGAAGAAGAATAGAAAGATGAAGAGGGTTTTTGGCGTTAAGAAAGACAAAGAACCGCCTCCGTCTATTGAAGATGCCTCCGAAAGAGTAATTTTTTCAATTTTTTTTGGTTTTTTTTAATTTTGTTACCTCTAGGGTTTTGATTTTTGGTTGGCATTGATTTTGCCTGGTGCGTTTAATTTTATGGAAGGATTGGTTGATTCTCTTTTGTTGGGTTCATTTGTTTTGGTTAGGGTTCAACGTTCTGTGTTGCTTCTTTTTCAGATTAATAAAAGAGGCGAATCAGTTGATGAAAAGATAAAGAAGCTTGATGTCGAACTCAGTAGGTATAAGGAACAGATTAAGAAAACAAGGCCCGGTCCTGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGGGTTTTAAAGCAAAAACGAATGTAAGCTTCCTTCGTGCTATCACATCTTTTGTAGCTTTGCTGATCATTTTCTTAAAAGATAAGTAGTTTGGTTGTGAATACTTTGGAATGTTGGTTTCGGTGCTGATTAGGAACTTCAGATCTTGAGACCTGGCTGAAGCTTAGATGTTAGGGGTGTTCGTGTATCATGGCTCAAGTATAACATATATGCTTACTTAATCATGTTTCATTGAGGGGTTTTGTTATCTAACTTAGTTCTGTAATCTTAGGGCTATAAGCTACCATAACATAAGAAGAGTTAATTCGTTAGGTTACCAGAAAATTCTTTGAATCACACGTCTTCTTTTCCTTTTTCTGTTCCACTTTTCAAACTTTTTCTTGCTGTGTAACTACTGATCGGTGCCCCCTTAGACTTTTATTGTCCTCAATTTAATTATGTATTTTGATGTAAGAAAGCTAGTAGATTTAAATGTTAGCTATCGAACTGGAAGCTGGTTTAAGTGCTACATAACAATACCTTTAAATGTGGTTGTTATGTTACTTCTTATGCTTGTGAACAGGTATGAAGGACAACGTGATATGCTGTACAATCAGACGTTTAACCTCGACCAAGTTGCATTTGCCTCAGAGGGCATAAAAGACGCTCAACAAACGGTACATATCCTTTTTGTGATCATCGTTGCTCATTTTCTGCCGCCCTCCCAAAAAAAAAAGGAAAAGGTTGGGCTGTCCATGACAAATTTGGCTTGAAAGAGATTTGGTGTTAGATCAAGGAAACTTTTGGATATTGAAACGGATAGCTTATTGGCTTCTTGCATGCTAATTGTTCGACTAGACATCCTGCATTTAAGTTTCTGTGTTTATAATGTGGGTCAGATGACCAAGAAACCTGGGTTGAGGTGGTTCCTATTAATGCCCCAGTTAATTCTTGCCGAAAATTTGTTTTCTTCGTAGCGAGGTCAGAGTTCAGGGCAGTTCAGGTGGAGCTTTTCCTGTCTAGTTGGAACCGGCTGCCTACCTCGTGAGATAACGAGGTAGGGGACAAACGTCATTCGGAAGGCATTTCTTGAAGTTCAATAACATGTCTATCTAGATTCTCTTATGGTTCTTCCTAATATCGGTCTAGCTTTTGATGGGATTTGACATCTGGGATGTATTTATCAAATCAAATAGGGGACTAAACTCTGTCAAACTAACGTTTTTCTTTTTCGTTTTTCAGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACGTCAGTAGTAATCAACTCTTTTTAGCATCCTTTAAGTTTAATTATGGTATTTTTTGAGAAGTTTTGTGTTGTTTCCTGCAGAACTTGCAAGACGAAATGATGGATATGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTGCCCGATGACATTGACGAGGATGAACTTTTGGGCGGTAAGATTGCTCCATTTAAATGTTCAAATTTGATAAAACATGACACGCTAGAAGCTTACGCCTTTACTGCCTTTTTCGAACGTAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCCGACAAGGAATCCGACTTGGAAGGAGAGCTCAATTTGCCTTCAGCTCCTACAGGGCAGACAGCAGTTCCTGCTGGCCGAACCAATGCACAGGTAACAATCGCTGAAACTTCAGTTCAGACATATACTGAATCCAATTTCTTTGAGTCGATAATCCCGTACTTGCTCGTTTAGATTCTAGACACGTGCTAATGCAGTTGTCGTTCATGGTGCATTAGCATGTGTGGTTTAACACCGCATCCATT

mRNA sequence

GGTCGTCTCTTTTTTATGAACGCTCCAAGAAACGGTAAGGAGTTTCTCATCGCGATTTTTCCAGTGAAAGCAAATTCTCTCTCAGGGGATTTTCCTCCACATTCCGGCGTTGTTCATCGTCTCTGAAAGTTAATCGACGTCGAACTGCTCCATCTTTGCGGCAGCAAAGATGAAGAGGGTTTTTGGCGTTAAGAAAGACAAAGAACCGCCTCCGTCTATTGAAGATGCCTCCGAAAGAATTAATAAAAGAGGCGAATCAGTTGATGAAAAGATAAAGAAGCTTGATGTCGAACTCAGTAGGTATAAGGAACAGATTAAGAAAACAAGGCCCGGTCCTGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGGGTTTTAAAGCAAAAACGAATGTATGAAGGACAACGTGATATGCTGTACAATCAGACGTTTAACCTCGACCAAGTTGCATTTGCCTCAGAGGGCATAAAAGACGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACAACTTGCAAGACGAAATGATGGATATGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTGCCCGATGACATTGACGAGGATGAACTTTTGGGCGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCCGACAAGGAATCCGACTTGGAAGGAGAGCTCAATTTGCCTTCAGCTCCTACAGGGCAGACAGCAGTTCCTGCTGGCCGAACCAATGCACAGGTAACAATCGCTGAAACTTCAGTTCAGACATATACTGAATCCAATTTCTTTGAGTCGATAATCCCGTACTTGCTCGTTTAGATTCTAGACACGTGCTAATGCAGTTGTCGTTCATGGTGCATTAGCATGTGTGGTTTAACACCGCATCCATT

Coding sequence (CDS)

ATGAAGAGGGTTTTTGGCGTTAAGAAAGACAAAGAACCGCCTCCGTCTATTGAAGATGCCTCCGAAAGAATTAATAAAAGAGGCGAATCAGTTGATGAAAAGATAAAGAAGCTTGATGTCGAACTCAGTAGGTATAAGGAACAGATTAAGAAAACAAGGCCCGGTCCTGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGGGTTTTAAAGCAAAAACGAATGTATGAAGGACAACGTGATATGCTGTACAATCAGACGTTTAACCTCGACCAAGTTGCATTTGCCTCAGAGGGCATAAAAGACGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACAACTTGCAAGACGAAATGATGGATATGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTGCCCGATGACATTGACGAGGATGAACTTTTGGGCGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAAGCTGATGGGGTTCCATCTTATCTCCAGCCCGACAAGGAATCCGACTTGGAAGGAGAGCTCAATTTGCCTTCAGCTCCTACAGGGCAGACAGCAGTTCCTGCTGGCCGAACCAATGCACAGGTAACAATCGCTGAAACTTCAGTTCAGACATATACTGAATCCAATTTCTTTGAGTCGATAATCCCGTACTTGCTCGTTTAG

Protein sequence

MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQVTIAETSVQTYTESNFFESIIPYLLV

Homology

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BLAST of Carg19003 vs. NCBI nr
Match: XP_022945948.1 (vacuolar protein sorting-associated protein 60.2-like [Cucurbita moschata])

HSP 1 Score: 414.1 bits (1063), Expect = 3.4e-112
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVP GRTNAQ
Sbjct: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPTGRTNAQ 220

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BLAST of Carg19003 vs. NCBI nr
Match: XP_022968311.1 (vacuolar protein sorting-associated protein 60.1-like [Cucurbita maxima])

HSP 1 Score: 414.1 bits (1063), Expect = 3.4e-112
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVEL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQV 222
           ADGVPSYLQPDKESDLEGELNLPSAPTGQ AVPAGRTNAQV
Sbjct: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQV 221

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BLAST of Carg19003 vs. NCBI nr
Match: XP_023541762.1 (vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.7 bits (1062), Expect = 4.4e-112
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKESDLEGELNLPSAPTGQ AVPAGRTNAQ
Sbjct: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQ 220

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BLAST of Carg19003 vs. NCBI nr
Match: XP_022957074.1 (vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985353.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita maxima] >XP_023529845.1 vacuolar protein sorting-associated protein 60.2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 404.1 bits (1037), Expect = 3.5e-109
Identity = 212/220 (96.36%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDKEPPPSI+DASERINKRG+SVDEKIKKLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
            DGVPSYLQPDKESDLEGELNLPSAPTG  AVPAGRTNAQ
Sbjct: 181 TDGVPSYLQPDKESDLEGELNLPSAPTGHAAVPAGRTNAQ 220

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BLAST of Carg19003 vs. NCBI nr
Match: XP_022150683.1 (vacuolar protein sorting-associated protein 60.2 [Momordica charantia])

HSP 1 Score: 401.7 bits (1031), Expect = 1.7e-108
Identity = 211/220 (95.91%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSI+DASERINKRG+SVDEKIKKLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASERINKRGDSVDEKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKE DL+GELNLPSAPTG  AVP GRTNAQ
Sbjct: 181 ADGVPSYLQPDKEPDLDGELNLPSAPTGHAAVPPGRTNAQ 220

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BLAST of Carg19003 vs. TAIR10
Match: AT3G10640.1 (SNF7 family protein)

HSP 1 Score: 352.4 bits (903), Expect = 2.2e-97
Identity = 178/220 (80.91%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KK+ EPPPSI+DAS+RINKRG+SV++KIKKLDVEL +YKEQ+KKTRPGPAQEA
Sbjct: 1   MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADG+PSYLQPD E+D + ELNLP+APTG    P GR  A+
Sbjct: 181 ADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAE 220

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BLAST of Carg19003 vs. TAIR10
Match: AT5G04850.2 (SNF7 family protein)

HSP 1 Score: 335.9 bits (860), Expect = 2.1e-92
Identity = 180/257 (70.04%), Postives = 203/257 (78.99%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +KEPPPSI+DAS+RINKRG+SV+EK+K+LD EL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLG-------------- 180
           KTV+IQDIDNLQD+MMD+MD S+EIQETLGRSYNVPDDIDED+LLG              
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGGKFFLCSLCCLSLG 180

Query: 181 -----------------------ELDALEADMGFETEADGVPSYLQPDKESDLEGELNLP 221
                                  ELDALEADMG ETEADGVPSYLQPDKE DL  ELNLP
Sbjct: 181 LVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLP 240

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BLAST of Carg19003 vs. TAIR10
Match: AT4G29160.1 (SNF7 family protein)

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 54/171 (31.58%), Postives = 85/171 (49.71%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K +       +A + ++K  E+++   KK  V L +   +++K +   ++  
Sbjct: 2   MNRLFGKPKQE------ANALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKE-YSRAK 61

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
            K  A++ LK+KR+YEGQ + L N    +       EG K   +T+ AL+S    +K M 
Sbjct: 62  NKRAAIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQ 121

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDAL 172
           K   I D+D   DE+ +  +   +IQE L        D DEDEL  ELD L
Sbjct: 122 KATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDEL 165

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BLAST of Carg19003 vs. TAIR10
Match: AT2G19830.1 (SNF7 family protein)

HSP 1 Score: 65.1 bits (157), Expect = 7.0e-11
Identity = 52/172 (30.23%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K +          + ++K  E+++   KK +V L +   +++K +   ++  
Sbjct: 3   MNRLFGKPKQE------TSTLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEF-SRAK 62

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
            K  A++ LK+KR+YE Q + L N    +       EG K   +T+ AL++    +K M 
Sbjct: 63  NKRAAIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQ 122

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALE 173
           K   I D+D   DE+ +  +   +IQE L   +   +D DEDEL  ELD LE
Sbjct: 123 KATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELEAELDELE 166

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BLAST of Carg19003 vs. Swiss-Prot
Match: sp|Q9FMC5|VP602_ARATH (Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702 GN=VPS60-2 PE=2 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 1.0e-96
Identity = 180/220 (81.82%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +KEPPPSI+DAS+RINKRG+SV+EK+K+LD EL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQD+MMD+MD S+EIQETLGRSYNVPDDIDED+LLGELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKE DL  ELNLPSAP G T  P GR  A+
Sbjct: 181 ADGVPSYLQPDKEPDLNDELNLPSAPMGHTGAPPGRAQAE 220

[Close]

BLAST of Carg19003 vs. Swiss-Prot
Match: sp|Q9LPN5|VP601_ARATH (Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702 GN=VPS60-1 PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.9e-96
Identity = 178/220 (80.91%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KK+ EPPPSI+DAS+RINKRG+SV++KIKKLDVEL +YKEQ+KKTRPGPAQEA
Sbjct: 1   MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADG+PSYLQPD E+D + ELNLP+APTG    P GR  A+
Sbjct: 181 ADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGRAQAE 220

[Close]

BLAST of Carg19003 vs. Swiss-Prot
Match: sp|Q54JK4|CHMP5_DICDI (Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=chmp5 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 92/189 (48.68%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKR FGV  + +P P++++A++RI  R   +DEKI  L+ EL  Y +QIK TRPGPAQ A
Sbjct: 1   MKRFFGV-SNNQPAPTLDEATKRIGGRMGQMDEKINGLNQELLAYDKQIKATRPGPAQNA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +K +A+RVL+QK+MYE QRD + + +FN++Q  FA+E ++D   T+SA+K   K++K  +
Sbjct: 61  IKQKAIRVLQQKKMYERQRDQMASTSFNMEQTKFATESMRDTITTVSAMKQGAKDMKTQL 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K ++I+D+D++QDEM D++D +NEIQE+LGR+Y  PD +DE EL  EL      MG E E
Sbjct: 121 KHIKIEDVDDMQDEMQDLLDYNNEIQESLGRAYQTPDTLDESELEAEL----MSMGEELE 180

Query: 181 AD-GVPSYL 189
            +  +PSYL
Sbjct: 181 LEASMPSYL 184

[Close]

BLAST of Carg19003 vs. Swiss-Prot
Match: sp|O74422|YQ56_SCHPO (Uncharacterized protein C162.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC162.06c PE=3 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.2e-30
Identity = 82/197 (41.62%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG K   +P  S+ DA + ++KR +SV+ KI KLD +LS ++++I  TRPGP Q A
Sbjct: 1   MHRLFGRKPPTQPTASLTDAIDSLDKRSDSVEVKIAKLDAQLSVFQQKIANTRPGPGQTA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +K RAM VL+QK++YE Q   L  Q+FN++Q A  +E +K+             +LK   
Sbjct: 61  LKQRAMNVLRQKKIYESQLQQLQQQSFNMEQAAMTTESLKNTMAXXXXXXXXXXQLKSQS 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPD-DIDEDELLGELDALEAD---MG 180
           K V I+ I+ LQDE+ D MD + E+ E LG+  N+ D ++DE+EL  EL+AL+ +   +G
Sbjct: 121 KNVSIEKIEKLQDEIQDYMDAAGELNEVLGQ--NMTDINVDEEELDAELEALQQESSWLG 180

Query: 181 FETEADGVPSYLQPDKE 194
            ++ A+  PSYL P  E
Sbjct: 181 DQSTAE-KPSYLMPSNE 194

[Close]

BLAST of Carg19003 vs. Swiss-Prot
Match: sp|Q9VVI9|CHMP5_DROME (Charged multivesicular body protein 5 OS=Drosophila melanogaster OX=7227 GN=Vps60 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 9.0e-24
Identity = 74/220 (33.64%), Postives = 117/220 (53.18%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K KEP PS+ D    ++ R  +                             +
Sbjct: 1   MNRLFGRGKPKEPGPSLNDCIAGVDARATNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNS 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQK+ YE Q + L NQ+FN++Q  +A++ +KD Q T++A+K   K++K   
Sbjct: 61  VKQKALRVLKQKKAYEQQAESLRNQSFNMEQANYAAQSLKDTQATVAAMKDGVKQMKTEY 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K + I  I+++QD+M DM + ++E+QE LGR+Y +P ++D+D+L  ELDAL    G E  
Sbjct: 121 KKINIDQIEDIQDDMADMFEQADEVQEALGRTYGMP-EVDDDDLQAELDAL----GDEIA 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
            D   SYL      D+      PS   G  ++  G++  +
Sbjct: 181 LDDDTSYL-----DDVVKAPEAPSREPGADSIVPGKSTIE 210

[Close]

BLAST of Carg19003 vs. TrEMBL
Match: tr|A0A1S3BFT5|A0A1S3BFT5_CUCME (charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 3.3e-108
Identity = 210/220 (95.45%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSI+DAS+RINKRGESVD+KIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKESD EGELNLP+AP G  AVPAGR NAQ
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQ 220

[Close]

BLAST of Carg19003 vs. TrEMBL
Match: tr|A0A0A0KWL4|A0A0A0KWL4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=3 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 3.3e-108
Identity = 210/220 (95.45%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSI+DAS+RINKRGESVD+KIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKESD EGELNLP+AP G  AVPAGR NAQ
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQ 220

[Close]

BLAST of Carg19003 vs. TrEMBL
Match: tr|A0A1S3V871|A0A1S3V871_VIGRR (charged multivesicular body protein 5-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106772569 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.2e-103
Identity = 200/220 (90.91%), Postives = 211/220 (95.91%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPSI+DAS+RI KRG++VD+KIKKLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKNKEPPPSIQDASDRITKRGDTVDDKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQKRMYEGQRDMLYNQTFNLDQV FASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDEL+GELDALE DMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELMGELDALELDMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ 221
           ADGVPSYLQPDKE DLE ELNLP APTGQTAVP GR+NAQ
Sbjct: 181 ADGVPSYLQPDKEPDLEAELNLPPAPTGQTAVPPGRSNAQ 220

[Close]

BLAST of Carg19003 vs. TrEMBL
Match: tr|A0A0L9VBD4|A0A0L9VBD4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g103400 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.2e-103
Identity = 207/253 (81.82%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPSI+DAS+RI KRG++VD+KIKKLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKNKEPPPSIQDASDRITKRGDTVDDKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQKRMYEGQRDMLYNQTFNLDQV FASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDEL+GELDALE DMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELMGELDALELDMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ-------VTIAETSVQTYTE 240
           ADGVPSYLQPDKE DLE ELNLP APTGQTAVP GR+NAQ       V+ +   V    +
Sbjct: 181 ADGVPSYLQPDKEPDLEAELNLPPAPTGQTAVPPGRSNAQVYYFAPYVSRSHCEVLGVKK 240

Query: 241 SNFFESIIPYLLV 247
           S+FF  ++ YL++
Sbjct: 241 SDFFH-LLEYLIL 252

[Close]

BLAST of Carg19003 vs. TrEMBL
Match: tr|A0A0S3SP39|A0A0S3SP39_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G124600 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.2e-103
Identity = 207/253 (81.82%), Postives = 226/253 (89.33%), Query Frame = 0


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPSI+DAS+RI KRG++VD+KIKKLD ELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKNKEPPPSIQDASDRITKRGDTVDDKIKKLDAELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQKRMYEGQRDMLYNQTFNLDQV FASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDEL+GELDALE DMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELMGELDALELDMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQTAVPAGRTNAQ-------VTIAETSVQTYTE 240
           ADGVPSYLQPDKE DLE ELNLP APTGQTAVP GR+NAQ       V+ +   V    +
Sbjct: 181 ADGVPSYLQPDKEPDLEAELNLPPAPTGQTAVPPGRSNAQVYYFAPYVSRSHCEVLGVKK 240

Query: 241 SNFFESIIPYLLV 247
           S+FF  ++ YL++
Sbjct: 241 SDFFH-LLEYLIL 252

The following BLAST results are available for this feature:

BLAST of Carg19003 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022945948.1	3.4e-112	99.55	vacuolar protein sorting-associated protein 60.2-like [Cucurbita moschata]	[more]
XP_022968311.1	3.4e-112	99.10	vacuolar protein sorting-associated protein 60.1-like [Cucurbita maxima]	[more]
XP_023541762.1	4.4e-112	99.55	vacuolar protein sorting-associated protein 60.1-like [Cucurbita pepo subsp. pep...	[more]
XP_022957074.1	3.5e-109	96.36	vacuolar protein sorting-associated protein 60.2 [Cucurbita moschata] >XP_022985...	[more]
XP_022150683.1	1.7e-108	95.91	vacuolar protein sorting-associated protein 60.2 [Momordica charantia]	[more]

BLAST of Carg19003 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10640.1	2.2e-97	80.91	SNF7 family protein	[more]
AT5G04850.2	2.1e-92	70.04	SNF7 family protein	[more]
AT4G29160.1	9.7e-13	31.58	SNF7 family protein	[more]
AT2G19830.1	7.0e-11	30.23	SNF7 family protein	[more]

BLAST of Carg19003 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FMC5\|VP602_ARATH	1.0e-96	81.82	Vacuolar protein sorting-associated protein 60.2 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q9LPN5\|VP601_ARATH	3.9e-96	80.91	Vacuolar protein sorting-associated protein 60.1 OS=Arabidopsis thaliana OX=3702...	[more]
sp\|Q54JK4\|CHMP5_DICDI	1.1e-40	48.68	Charged multivesicular body protein 5 OS=Dictyostelium discoideum OX=44689 GN=ch...	[more]
sp\|O74422\|YQ56_SCHPO	2.2e-30	41.62	Uncharacterized protein C162.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC...	[more]
sp\|Q9VVI9\|CHMP5_DROME	9.0e-24	33.64	Charged multivesicular body protein 5 OS=Drosophila melanogaster OX=7227 GN=Vps6...	[more]

BLAST of Carg19003 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BFT5\|A0A1S3BFT5_CUCME	3.3e-108	95.45	charged multivesicular body protein 5 OS=Cucumis melo OX=3656 GN=LOC103489370 PE...	[more]
tr\|A0A0A0KWL4\|A0A0A0KWL4_CUCSA	3.3e-108	95.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613490 PE=3 SV=1	[more]
tr\|A0A1S3V871\|A0A1S3V871_VIGRR	3.2e-103	90.91	charged multivesicular body protein 5-like OS=Vigna radiata var. radiata OX=3916...	[more]
tr\|A0A0L9VBD4\|A0A0L9VBD4_PHAAN	3.2e-103	81.82	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g103400 PE...	[more]
tr\|A0A0S3SP39\|A0A0S3SP39_PHAAN	3.2e-103	81.82	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007034	vacuolar transport

Vocabulary: **INTERPRO**
Term	Definition
IPR005024	Snf7_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19003-RA	Carg19003-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 99..119
None	No IPR available	COILS	Coil	Coil	coord: 128..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..212
None	No IPR available	PANTHER	PTHR22761	SNF7 - RELATED	coord: 1..220
None	No IPR available	PANTHER	PTHR22761:SF39	VACUOLAR PROTEIN SORTING PROTEIN 60.2	coord: 1..220
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 12..209 e-value: 7.1E-55 score: 185.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19003	Cla020475	Watermelon (97103) v1	carwmB1050
Carg19003	Csa5G613490	Cucumber (Chinese Long) v2	carcuB1066
Carg19003	MELO3C012333	Melon (DHL92) v3.5.1	carmeB1019
Carg19003	ClCG05G021950	Watermelon (Charleston Gray)	carwcgB1023
Carg19003	CSPI05G26150	Wild cucumber (PI 183967)	carcpiB1088
Carg19003	Cucsa.282770	Cucumber (Gy14) v1	carcgyB1166
Carg19003	CmaCh04G014460	Cucurbita maxima (Rimu)	carcmaB1457
Carg19003	CmaCh18G009600	Cucurbita maxima (Rimu)	carcmaB1456
Carg19003	CmoCh04G015180	Cucurbita moschata (Rifu)	carcmoB1412
Carg19003	CmoCh18G009610	Cucurbita moschata (Rifu)	carcmoB1411
Carg19003	Lsi04G001650	Bottle gourd (USVL1VR-Ls)	carlsiB960
Carg19003	Cp4.1LG09g03570	Cucurbita pepo (Zucchini)	carcpeB1464
Carg19003	Cp4.1LG01g14230	Cucurbita pepo (Zucchini)	carcpeB1466
Carg19003	CsGy5G025610	Cucumber (Gy14) v2	carcgybB1035
Carg19003	MELO3C012333.2	Melon (DHL92) v3.6.1	carmedB1031
Carg19003	Cla97C05G103660	Watermelon (97103) v2	carwmbB1109

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19003	Carg01893	Silver-seed gourd	carcarB629

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19003	Cucumber (Chinese Long) v3	carcucB1099
Carg19003	Wax gourd	carwgoB1236