Cp4.1LG09g03570 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g03570
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Charged multivesicular body protein 5
Location	Cp4.1LG09 : 2176499 .. 2179690 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACATGACCAAATAATAATTACCGTTAAAGTTCATCCAATAAGATAGAATCGGATGCACAGGAATATTATTCCCTCGGTCGGCTCTTTTTTATGAACGCTCCAAGAAACGGTAAAGAGTTTCTCATCGCGATTTTTCCAGTGAAAGCAAATTCTCTCTCAGGGGATTTTCCTCCACATTCCGGCGTTGTTCATCGTCTCTGAAAGTTAGTCGACGTCGAACTGCTCCATCTTTGCGGCAGCGGAGGAAGAGGAAGAAGAGTAGAAAGATGAAGAGGGTTTTTGGCGTTAAGAAAGACAAAGAACCGCCTCCGTCTATTGAAGATGCCTCCGAAAGAGTAATTTTTCATTTTTTTTTTAAATTTTGTTACCTCTAGGGTTTTGATTTTTGGTTGGCATTGATTTTGCCTGGTGCGTTTAATTTTATGGAAGGATTGGTTGATTCTCTTTTGTTGGATTCATTTGTTTTGGTTAGGGTTCAACGTTCTGTGTTGCTTCTTTTTCAGATTAATAAAAGAGGCGAATCAGTTGATGAAAAGATAAAGAAGCTTGATGTCGAACTCAGTAGGTATAAGGAACAGATTAAGAAAACAAGGCCCGGTCCTGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGGGTTTTAAAGCAAAAACGAATGTAAGCTCCCTTCGTGTTTTCACATCTTTTTGTAGCTTTGCTTAAAATTCTTCTGTGCGACATTTGCAGATCATTTTCTCAGAAAATAAGTAGTTTGGTTGTGAATACTTTGGAATGGTGGTTTCGGTGAATTGATTAGGAACTTCAGATCTTGAGATCTTGCAGAAGCTTGGATGTTAGGGGTGTTCGTGTATCATGGCTCAAGTATAGCATATATGCTTACTTAATCATGTTTCATTGAGGGGTTTTGTTATCTAACTTTGTTCTGTAGTCTTAGGGCTTATAACATAAGAAGAGTTAATTCGTTAGATTACCAGAAAATTCTTAGAATCACACTTCTTTTCCTTTTTCTGTTCCACTTTTCAAACTTTTCTTGCTGTGTAACTACTGATGGTGCCCCCTTAGACTTTTATTGTCCTTAACTTAATTATGTATTTTGATGTAAGAAAGCTAGTATATTTAAATGTTAGCTATCAAACTGGAAGCTGGTTTAAGTGCTACATAACAATACCTTTAAATATGGTTGTTATGTTACTTCTTATGCTTGTGAACAGGTATGAAGGACAACGTGATATGCTGTACAATCAGACGTTTAACCTTGACCAAGTTGCATTTGCCTCAGAGGGCATAAAAGACGCTCAACAAACGGTACATATCCTTTTTGTGATCATCGTTGCTCATTTTCTGCCGCCCTCCCAAAAAAAAAAGGAAAAGGTTGGGCTGTCCATGACAAATTTGGCTTCAAAGAGATTTGGTGTTAGATCAAGGAAACTTGTGGATATTGAAACGGATAGCTTATTGGCTTCTTGCATGCTAATTGTTCGACTAGACATCCTGCATTTTAGTTTCTGTGTTTATGATGTGGGTCAGATGACCAAGAAACCTGGGTTGAGGTGGTTCCTATTAATGCCCCAGTTAATTCTTGCCGAAAATTTGTTTTCTTCGTAGCGAGGTCAGAGTTCAGGGCAGTTCAGGTGGAGCTTTTCCTGTCTAGTTGGAACCGGCTGCCTACCTCGTGAGATAACGAGGTAGGGGACAAACGTCATTCGGAAGGCATTTCTTGAAGTTCAATAAAATGTCTATCTAGATTCTCTTATGGTTCTTCCTAATATCGGTCTAGCTTTTGATGGGATTGACATCTGGGATGTACTTATCAAATCAAATAGGGGACTAAACTCTGTCATACTAACGTTTTTCTTTTTTGTTTTTCAGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACGTCAGTAGCAATCAACTCTTTTTAGCATCCTTTACGTTCAATTATGGCATTCTTTTAGAGGTTTTGTGCTGTTTCCTGCAGAACTTGCAAGACGAAATGATGGATATGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTGCCCGATGACATTGACGAGGATGAACTTTTGGGCGGTAAGATTGCTCCATTTAAATGTTCAAATTTGATAAAACATGACACGCTAGAAGCTTACGCCTTTACTGCCTTTTTCGAACGTAGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAGGCTGATGGGGTTCCATCTTATCTCCAGCCCGACAAGGAATCCGACTTGGAAGGAGAACTCAATTTGCCTTCAGCTCCTACAGGGCAGGCAGCAGTTCCTGCTGGCAGAACCAATGCACAGGTAACAATCGGTGAAACTTCAGTTCAGACATATACTGAATCCAACTTCTTTGAGTCGATAATCCCGTACTTGTTTAGATTCAAGACACGTGCTAATGCAGTTTTCGTTCATGGTGCATTAGCACGTGTGGTTTAACACCGCATCCATTAACATAGAAAAGATCTAAGCAAGTTCTAACCAAATGGTCTATAAAGGTCAAATAAGTGACTTAAAAGGTCGAGTTCAAGCCGTGATAACCACCTACCTAAGATTTAATATCCTACAAGTTACCTTAATAACCAAACCGTTGACATTTGTCAGTCACTAGAGCAAGTAAGAGAACAATCAATGAATCAACAAGAAAAGCCCATTATTATCGGATTGTACACCATTGTGTCTAGCTAGGGCTAAGCAGTTCTCGAATGAGAATAGTTGAGATGTGCAAGTCGGGCTCACTTATGACGATCATTTAGATAAATAAATAATTGTAAGTGAGTTGTTGCTTTACAATTGCCTCTTTTATATGCACTCACATTGAGTTTTGTTCTAAATTTGATGCACAGGCTGAGGATGAATTGGGGTTACCAGCTGTTCCTCGCGCATCCCTTCGTGGGTAAAAGGTATAAACTGATGGAGTGAACGAACCCCTTTGTATACATGTTGTGCAGATTTTATAGAGATATATTCTTATTGATCTTATAATTAATTATTCACTTCCATCATCATTTGGAACTCTAAAATCTTTGGCTATACTGATCAAACAGTTATTATGTATACCTCATGAAATTAATGCTATAAAGTGACTAGAGGGTGGAGATTGCAATAATTAACTAA

mRNA sequence

TACATGACCAAATAATAATTACCGTTAAAGTTCATCCAATAAGATAGAATCGGATGCACAGGAATATTATTCCCTCGGTCGGCTCTTTTTTATGAACGCTCCAAGAAACGGTAAAGAGTTTCTCATCGCGATTTTTCCAGTGAAAGCAAATTCTCTCTCAGGGGATTTTCCTCCACATTCCGGCGTTGTTCATCGTCTCTGAAAGTTAGTCGACGTCGAACTGCTCCATCTTTGCGGCAGCGGAGGAAGAGGAAGAAGAGTAGAAAGATGAAGAGGGTTTTTGGCGTTAAGAAAGACAAAGAACCGCCTCCGTCTATTGAAGATGCCTCCGAAAGAATTAATAAAAGAGGCGAATCAGTTGATGAAAAGATAAAGAAGCTTGATGTCGAACTCAGTAGGTATAAGGAACAGATTAAGAAAACAAGGCCCGGTCCTGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGGGTTTTAAAGCAAAAACGAATGTATGAAGGACAACGTGATATGCTGTACAATCAGACGTTTAACCTTGACCAAGTTGCATTTGCCTCAGAGGGCATAAAAGACGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACAACTTGCAAGACGAAATGATGGATATGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTGCCCGATGACATTGACGAGGATGAACTTTTGGGCGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAGGCTGATGGGGTTCCATCTTATCTCCAGCCCGACAAGGAATCCGACTTGGAAGGAGAACTCAATTTGCCTTCAGCTCCTACAGGGCAGGCAGCAGTTCCTGCTGGCAGAACCAATGCACAGGCTGAGGATGAATTGGGGTTACCAGCTGTTCCTCGCGCATCCCTTCGTGGGTAAAAGGTATAAACTGATGGAGTGAACGAACCCCTTTGTATACATGTTGTGCAGATTTTATAGAGATATATTCTTATTGATCTTATAATTAATTATTCACTTCCATCATCATTTGGAACTCTAAAATCTTTGGCTATACTGATCAAACAGTTATTATGTATACCTCATGAAATTAATGCTATAAAGTGACTAGAGGGTGGAGATTGCAATAATTAACTAA

Coding sequence (CDS)

ATGAAGAGGGTTTTTGGCGTTAAGAAAGACAAAGAACCGCCTCCGTCTATTGAAGATGCCTCCGAAAGAATTAATAAAAGAGGCGAATCAGTTGATGAAAAGATAAAGAAGCTTGATGTCGAACTCAGTAGGTATAAGGAACAGATTAAGAAAACAAGGCCCGGTCCTGCTCAAGAAGCTGTTAAAGCTCGAGCGATGAGGGTTTTAAAGCAAAAACGAATGTATGAAGGACAACGTGATATGCTGTACAATCAGACGTTTAACCTTGACCAAGTTGCATTTGCCTCAGAGGGCATAAAAGACGCTCAACAAACGATGTCGGCCTTGAAATCTGCCAACAAGGAGTTGAAAGGAATGATGAAAACAGTGAGGATACAGGACATAGACAACTTGCAAGACGAAATGATGGATATGATGGATGTGAGCAATGAAATTCAAGAGACTCTTGGTAGGAGCTATAATGTGCCCGATGACATTGACGAGGATGAACTTTTGGGCGAGCTTGATGCCTTGGAAGCAGACATGGGATTTGAAACTGAGGCTGATGGGGTTCCATCTTATCTCCAGCCCGACAAGGAATCCGACTTGGAAGGAGAACTCAATTTGCCTTCAGCTCCTACAGGGCAGGCAGCAGTTCCTGCTGGCAGAACCAATGCACAGGCTGAGGATGAATTGGGGTTACCAGCTGTTCCTCGCGCATCCCTTCGTGGGTAA

Protein sequence

MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEAVKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMMKTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETEADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG

Homology

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BLAST of Cp4.1LG09g03570 vs. Swiss-Prot
Match: CHMP5_DANRE (Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.2e-43
Identity = 102/231 (44.16%), Postives = 142/231 (61.47%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPP++ D    ++ R ESVD+KI +LD EL +YK+Q+KK R GP++  
Sbjct: 1   MNRIFGRGKPKGPPPNLTDCISGVDSRAESVDKKIARLDAELMKYKDQMKKMRDGPSKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +AMRVLKQKRMYEGQRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKAMRVLKQKRMYEGQRDQLMQQSFNMEQANYTIQTLKDTKTTVEAMKIGAKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ DMM+ +NE+QE L RSY  P +IDED+L  ELDAL  ++     
Sbjct: 121 KNVKIDQIEDLQDQLEDMMEDANEVQEALSRSYGTP-EIDEDDLEAELDALGDEL----- 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVP 232
                  L  D  S L+   + P+ P G         +    DE GLP +P
Sbjct: 181 -------LLDDDNSYLDEASSAPAIPEGAPGDRTTNRDGVLVDEFGLPQIP 218

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BLAST of Cp4.1LG09g03570 vs. Swiss-Prot
Match: CHMP5_RAT (Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.2e-43
Identity = 109/233 (46.78%), Postives = 141/233 (60.52%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R FG  K K PPPS+ D    ++ R ES+D+KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ DMM+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQA--EDELGLPAVP 232
           AD   SYL               SAP     VP    N      DE GLP +P
Sbjct: 181 ADEDSSYLD-----------EAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217

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BLAST of Cp4.1LG09g03570 vs. Swiss-Prot
Match: CHMP5_MOUSE (Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.2e-43
Identity = 109/233 (46.78%), Postives = 141/233 (60.52%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R FG  K K PPPS+ D    ++ R ES+D+KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRFFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ DMM+ +NEIQE LGRSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KEVKIDQIEDLQDQLEDMMEDANEIQEALGRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQA--EDELGLPAVP 232
           AD   SYL               SAP     VP    N      DE GLP +P
Sbjct: 181 ADEDSSYLD-----------EAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217

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BLAST of Cp4.1LG09g03570 vs. Swiss-Prot
Match: CHMP5_PONAB (Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-42
Identity = 108/233 (46.35%), Postives = 141/233 (60.52%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPPS+ D    ++ R ES+D+KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ DMM+ +NEIQE L RSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQA--EDELGLPAVP 232
           AD   SYL               SAP     VP    N      DE GLP +P
Sbjct: 181 ADEDSSYLD-----------EAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217

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BLAST of Cp4.1LG09g03570 vs. Swiss-Prot
Match: CHMP5_HUMAN (Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-42
Identity = 108/233 (46.35%), Postives = 141/233 (60.52%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K K PPPS+ D    ++ R ES+D+KI +LD EL +YK+QIKK R GPA+  
Sbjct: 1   MNRLFGKAKPKAPPPSLTDCIGTVDSRAESIDKKISRLDAELVKYKDQIKKMREGPAKNM 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK +A+RVLKQKRMYE QRD L  Q+FN++Q  +  + +KD + T+ A+K   KE+K   
Sbjct: 61  VKQKALRVLKQKRMYEQQRDNLAQQSFNMEQANYTIQSLKDTKTTVDAMKLGVKEMKKAY 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K V+I  I++LQD++ DMM+ +NEIQE L RSY  P ++DED+L  ELDAL    G E  
Sbjct: 121 KQVKIDQIEDLQDQLEDMMEDANEIQEALSRSYGTP-ELDEDDLEAELDAL----GDELL 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQA--EDELGLPAVP 232
           AD   SYL               SAP     VP    N      DE GLP +P
Sbjct: 181 ADEDSSYLD-----------EAASAPAIPEGVPTDTKNKDGVLVDEFGLPQIP 217

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BLAST of Cp4.1LG09g03570 vs. TrEMBL
Match: A0A0A0KWL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613490 PE=3 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 5.4e-118
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSI+DAS+RINKRGESVD+KIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESD EGELNLP+AP G AAVPAGR NAQAEDELGLPAVP ASLRG
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLRG 237

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BLAST of Cp4.1LG09g03570 vs. TrEMBL
Match: M5XHS3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010749mg PE=3 SV=1)

HSP 1 Score: 416.8 bits (1070), Expect = 1.8e-113
Identity = 216/237 (91.14%), Postives = 231/237 (97.47%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPS+ DASERINKRGE+VDEKIKKLD+EL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKEKEPPPSVGDASERINKRGETVDEKIKKLDIELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDE++L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLMGELDALEADMGLETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESDL+ EL+LPSAP G AA PAGR+NAQAEDELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDELGLPAVPRASLRG 237

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BLAST of Cp4.1LG09g03570 vs. TrEMBL
Match: B9RXZ5_RICCO (Charged multivesicular body protein, putative OS=Ricinus communis GN=RCOM_1305670 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 8.9e-113
Identity = 214/237 (90.30%), Postives = 229/237 (96.62%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDKEPPPSI+DAS+RINK+G+SVD+KIKKLD EL+RY+EQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSIQDASDRINKKGDSVDDKIKKLDAELTRYREQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYN+PDDIDE+EL+GELDALEADMG E E
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNIPDDIDEEELMGELDALEADMGLEIE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
            DGVPSYLQPDKE DL+ ELNLPSAPTGQAA PAGR NAQAEDELGLPAVPRAS+RG
Sbjct: 181 GDGVPSYLQPDKEPDLDSELNLPSAPTGQAAGPAGRNNAQAEDELGLPAVPRASIRG 237

[Close]

BLAST of Cp4.1LG09g03570 vs. TrEMBL
Match: A0A151T123_CAJCA (Charged multivesicular body protein 5 OS=Cajanus cajan GN=KK1_023109 PE=3 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 5.8e-112
Identity = 213/237 (89.87%), Postives = 230/237 (97.05%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+K+PPP+I+DA++RI KRG++V+EKIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKNKDPPPTIQDANDRITKRGDTVEEKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQKRMYEGQRDMLYNQTFNLDQV FASEGIKDAQQTMSALK+ANKELKGMM
Sbjct: 61  IKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVQFASEGIKDAQQTMSALKTANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESDLE ELNLPSAP+GQ AVP GR+NAQ EDELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDLEAELNLPSAPSGQTAVPPGRSNAQTEDELGLPAVPRASLRG 237

[Close]

BLAST of Cp4.1LG09g03570 vs. TrEMBL
Match: B9HVJ9_POPTR (SNF7 family protein OS=Populus trichocarpa GN=POPTR_0010s24890g PE=3 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 7.6e-112
Identity = 215/237 (90.72%), Postives = 229/237 (96.62%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KKDKEPPPSI+DASE+INKRG++VDEKIKKLD EL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MRRVFGAKKDKEPPPSIQDASEKINKRGDTVDEKIKKLDAELARYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMR+LKQKRMYEGQRDMLYNQT+NLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRILKQKRMYEGQRDMLYNQTYNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDE+EL+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEELMGELDALEADMGMETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           +DGVPSYLQPDKESDL+ ELNLPSAPTGQ A PA R NAQAEDELGLPAVPRASLRG
Sbjct: 181 SDGVPSYLQPDKESDLDAELNLPSAPTGQGA-PASRYNAQAEDELGLPAVPRASLRG 236

[Close]

BLAST of Cp4.1LG09g03570 vs. TAIR10
Match: AT3G10640.1 (AT3G10640.1 SNF7 family protein)

HSP 1 Score: 378.3 bits (970), Expect = 3.6e-105
Identity = 195/237 (82.28%), Postives = 221/237 (93.25%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFG KK+ EPPPSI+DAS+RINKRG+SV++KIKKLDVEL +YKEQ+KKTRPGPAQEA
Sbjct: 1   MRRVFGAKKNTEPPPSIQDASDRINKRGDSVEDKIKKLDVELCKYKEQLKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVS+EIQE+LGRSYN+PD +DED+L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSSEIQESLGRSYNIPDGLDEDDLMGELDALEADMGNETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADG+PSYLQPD E+D + ELNLP+APTG    P GR  AQAEDE GLPAVPRASLRG
Sbjct: 181 ADGMPSYLQPDTETDYDSELNLPAAPTGHNGAPHGR--AQAEDEFGLPAVPRASLRG 235

[Close]

BLAST of Cp4.1LG09g03570 vs. TAIR10
Match: AT5G04850.2 (AT5G04850.2 SNF7 family protein)

HSP 1 Score: 349.7 bits (896), Expect = 1.4e-96
Identity = 193/274 (70.44%), Postives = 217/274 (79.20%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKR+FG K +KEPPPSI+DAS+RINKRG+SV+EK+K+LD EL +YK+QIK+TRPGPA EA
Sbjct: 1   MKRIFGAKNNKEPPPSIQDASDRINKRGDSVEEKVKRLDAELCKYKDQIKRTRPGPALEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           +KARAMRVLKQK+MYEGQRDMLYNQTFNLDQV+FA+EG+KDAQQTM+ALKSANKELKGMM
Sbjct: 61  IKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVSFAAEGLKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGE------------- 180
           KTV+IQDIDNLQD+MMD+MD S+EIQETLGRSYNVPDDIDED+LLG              
Sbjct: 121 KTVKIQDIDNLQDDMMDLMDESSEIQETLGRSYNVPDDIDEDDLLGGKFFLCSLCCLSLG 180

Query: 181 ---------LDA---------------LEADMGFETEADGVPSYLQPDKESDLEGELNLP 238
                    L++               LEADMG ETEADGVPSYLQPDKE DL  ELNLP
Sbjct: 181 LVETISLCLLNSAPYTLYRFVNSELDALEADMGNETEADGVPSYLQPDKEPDLNDELNLP 240

[Close]

BLAST of Cp4.1LG09g03570 vs. TAIR10
Match: AT4G29160.1 (AT4G29160.1 SNF7 family protein)

HSP 1 Score: 75.5 bits (184), Expect = 5.0e-14
Identity = 70/220 (31.82%), Postives = 106/220 (48.18%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K +       +A + ++K  E+++   KK  V L +   +++K +     + 
Sbjct: 2   MNRLFGKPKQEA------NALQTLDKLNETLEMLEKKEKVLLKKAGAEVEKAKEYSRAKN 61

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
            +A A++ LK+KR+YEGQ + L N    +       EG K   +T+ AL+S    +K M 
Sbjct: 62  KRA-AIQCLKRKRLYEGQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRSGASAMKAMQ 121

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K   I D+D   DE+ +  +   +IQE L        D DEDEL  ELD LE++   E E
Sbjct: 122 KATNIDDVDKTMDEINEQTENMKQIQEALATPMGAAADFDEDELAAELDELESE---ELE 181

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQ 221
           +      LQP   +       LPS P     VPAGR  A+
Sbjct: 182 S----QLLQPATTAP-----PLPSVP-----VPAGRQPAR 197

[Close]

BLAST of Cp4.1LG09g03570 vs. TAIR10
Match: AT2G19830.1 (AT2G19830.1 SNF7 family protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.7e-11
Identity = 68/225 (30.22%), Postives = 104/225 (46.22%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M R+FG  K +          + ++K  E+++   KK +V L +   +++K +     + 
Sbjct: 3   MNRLFGKPKQET------STLQTLDKLNETLEMLEKKENVLLKKATGEVEKAKEFSRAKN 62

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
            +A A++ LK+KR+YE Q + L N    +       EG K   +T+ AL++    +K M 
Sbjct: 63  KRA-AIQCLKRKRLYEQQVEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMQ 122

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           K   I D+D   DE+ +  +   +IQE L   +   +D DEDEL  ELD LE   G E E
Sbjct: 123 KATNIDDVDKTMDEINEQTENMKQIQEALSAPFGA-NDFDEDELEAELDELE---GAELE 182

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDEL 226
                  LQP      +G  N P      A  PA +     EDEL
Sbjct: 183 ----EQLLQPVPIHVPQG--NKP------ARAPAQKQPTAEEDEL 204

[Close]

BLAST of Cp4.1LG09g03570 vs. NCBI nr
Match: gi|659091801|ref|XP_008446740.1| (PREDICTED: charged multivesicular body protein 5 [Cucumis melo])

HSP 1 Score: 433.7 bits (1114), Expect = 2.0e-118
Identity = 228/237 (96.20%), Postives = 233/237 (98.31%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSI+DAS+RINKRGESVD+KIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESD EGELNLP+AP G AAVPAGR NAQAEDELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPRASLRG 237

[Close]

BLAST of Cp4.1LG09g03570 vs. NCBI nr
Match: gi|449434524|ref|XP_004135046.1| (PREDICTED: charged multivesicular body protein 5 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 7.8e-118
Identity = 227/237 (95.78%), Postives = 232/237 (97.89%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKKDKEPPPSI+DAS+RINKRGESVD+KIKKLDVELSRYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKDKEPPPSIQDASDRINKRGESVDDKIKKLDVELSRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTVRIQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE
Sbjct: 121 KTVRIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESD EGELNLP+AP G AAVPAGR NAQAEDELGLPAVP ASLRG
Sbjct: 181 ADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELGLPAVPHASLRG 237

[Close]

BLAST of Cp4.1LG09g03570 vs. NCBI nr
Match: gi|596210163|ref|XP_007223847.1| (hypothetical protein PRUPE_ppa010749mg [Prunus persica])

HSP 1 Score: 416.8 bits (1070), Expect = 2.6e-113
Identity = 216/237 (91.14%), Postives = 231/237 (97.47%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFGVKK+KEPPPS+ DASERINKRGE+VDEKIKKLD+EL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGVKKEKEPPPSVGDASERINKRGETVDEKIKKLDIELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VK+RAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSYNVPDDIDE++L+GELDALEADMG ETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYNVPDDIDEEDLMGELDALEADMGLETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           ADGVPSYLQPDKESDL+ EL+LPSAP G AA PAGR+NAQAEDELGLPAVPRASLRG
Sbjct: 181 ADGVPSYLQPDKESDLDAELHLPSAPIGHAAAPAGRSNAQAEDELGLPAVPRASLRG 237

[Close]

BLAST of Cp4.1LG09g03570 vs. NCBI nr
Match: gi|747060833|ref|XP_011076863.1| (PREDICTED: charged multivesicular body protein 5-like [Sesamum indicum])

HSP 1 Score: 415.6 bits (1067), Expect = 5.8e-113
Identity = 214/237 (90.30%), Postives = 229/237 (96.62%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           M+RVFGVKKDKEPPPS++DAS+RINKRGE+VDEKIKKLD EL+RY+EQIKKTRPGPAQEA
Sbjct: 1   MRRVFGVKKDKEPPPSVQDASDRINKRGETVDEKIKKLDAELARYREQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQK+MYEGQRDMLYNQTFNLDQVAFA+EGIKDAQQTMSALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKKMYEGQRDMLYNQTFNLDQVAFAAEGIKDAQQTMSALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQE+LGRSYNVPDDIDEDEL+GELDALEADMGFETE
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQESLGRSYNVPDDIDEDELMGELDALEADMGFETE 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
            DGVPSYLQPD+E DLE ELNLPSAP+G A VPAGR N QAEDELGLPAVPRASLRG
Sbjct: 181 GDGVPSYLQPDREPDLESELNLPSAPSGHAPVPAGRANVQAEDELGLPAVPRASLRG 237

[Close]

BLAST of Cp4.1LG09g03570 vs. NCBI nr
Match: gi|470142773|ref|XP_004307072.1| (PREDICTED: charged multivesicular body protein 5-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 415.6 bits (1067), Expect = 5.8e-113
Identity = 215/237 (90.72%), Postives = 231/237 (97.47%), Query Frame = 1


Query: 1   MKRVFGVKKDKEPPPSIEDASERINKRGESVDEKIKKLDVELSRYKEQIKKTRPGPAQEA 60
           MKRVFG KKDKEPPPSI DAS+RINKRG++VDEKIKKLDVEL+RYKEQIKKTRPGPAQEA
Sbjct: 1   MKRVFGAKKDKEPPPSIGDASDRINKRGDTVDEKIKKLDVELNRYKEQIKKTRPGPAQEA 60

Query: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMSALKSANKELKGMM 120
           VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTM+ALKSANKELKGMM
Sbjct: 61  VKARAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTALKSANKELKGMM 120

Query: 121 KTVRIQDIDNLQDEMMDMMDVSNEIQETLGRSYNVPDDIDEDELLGELDALEADMGFETE 180
           KTV+IQDIDNLQDEMMD+MDVSNEIQETLGRSY+VPDDIDE+EL+GELDALEADMG ET+
Sbjct: 121 KTVKIQDIDNLQDEMMDLMDVSNEIQETLGRSYSVPDDIDEEELMGELDALEADMGMETK 180

Query: 181 ADGVPSYLQPDKESDLEGELNLPSAPTGQAAVPAGRTNAQAEDELGLPAVPRASLRG 238
           +DGVPSYLQPD+ESD++GELNLPSAP G AAVPAGRTN QAEDELGLPAVPRA+LRG
Sbjct: 181 SDGVPSYLQPDRESDIDGELNLPSAPIGHAAVPAGRTNGQAEDELGLPAVPRATLRG 237

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g03570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CHMP5_DANRE	8.2e-43	44.16	Charged multivesicular body protein 5 OS=Danio rerio GN=chmp5 PE=2 SV=1	[more]
CHMP5_RAT	8.2e-43	46.78	Charged multivesicular body protein 5 OS=Rattus norvegicus GN=Chmp5 PE=2 SV=1	[more]
CHMP5_MOUSE	8.2e-43	46.78	Charged multivesicular body protein 5 OS=Mus musculus GN=Chmp5 PE=1 SV=1	[more]
CHMP5_PONAB	2.4e-42	46.35	Charged multivesicular body protein 5 OS=Pongo abelii GN=CHMP5 PE=2 SV=1	[more]
CHMP5_HUMAN	2.4e-42	46.35	Charged multivesicular body protein 5 OS=Homo sapiens GN=CHMP5 PE=1 SV=1	[more]

BLAST of Cp4.1LG09g03570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWL4_CUCSA	5.4e-118	95.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613490 PE=3 SV=1	[more]
M5XHS3_PRUPE	1.8e-113	91.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010749mg PE=3 SV=1	[more]
B9RXZ5_RICCO	8.9e-113	90.30	Charged multivesicular body protein, putative OS=Ricinus communis GN=RCOM_130567...	[more]
A0A151T123_CAJCA	5.8e-112	89.87	Charged multivesicular body protein 5 OS=Cajanus cajan GN=KK1_023109 PE=3 SV=1	[more]
B9HVJ9_POPTR	7.6e-112	90.72	SNF7 family protein OS=Populus trichocarpa GN=POPTR_0010s24890g PE=3 SV=1	[more]

BLAST of Cp4.1LG09g03570 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10640.1	3.6e-105	82.28	SNF7 family protein	[more]
AT5G04850.2	1.4e-96	70.44	SNF7 family protein	[more]
AT4G29160.1	5.0e-14	31.82	SNF7 family protein	[more]
AT2G19830.1	6.7e-11	30.22	SNF7 family protein	[more]

BLAST of Cp4.1LG09g03570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091801\|ref\|XP_008446740.1\|	2.0e-118	96.20	PREDICTED: charged multivesicular body protein 5 [Cucumis melo]	[more]
gi\|449434524\|ref\|XP_004135046.1\|	7.8e-118	95.78	PREDICTED: charged multivesicular body protein 5 [Cucumis sativus]	[more]
gi\|596210163\|ref\|XP_007223847.1\|	2.6e-113	91.14	hypothetical protein PRUPE_ppa010749mg [Prunus persica]	[more]
gi\|747060833\|ref\|XP_011076863.1\|	5.8e-113	90.30	PREDICTED: charged multivesicular body protein 5-like [Sesamum indicum]	[more]
gi\|470142773\|ref\|XP_004307072.1\|	5.8e-113	90.72	PREDICTED: charged multivesicular body protein 5-like [Fragaria vesca subsp. ves...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007034	vacuolar transport

Vocabulary: **INTERPRO**
Term	Definition
IPR005024	Snf7_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g03570.1	Cp4.1LG09g03570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 12..209 score: 6.0
None	No IPR available	unknown	Coil	Coil	coord: 128..148 score: -coord: 99..119 scor
None	No IPR available	PANTHER	PTHR22761	SNF7 - RELATED	coord: 1..236 score: 1.6E
None	No IPR available	PANTHER	PTHR22761:SF17	SUBFAMILY NOT NAMED	coord: 1..236 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g03570	Cucsa.282770	Cucumber (Gy14) v1	cgycpeB0745
Cp4.1LG09g03570	CmaCh18G009600	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g03570	CmaCh04G014460	Cucurbita maxima (Rimu)	cmacpeB700
Cp4.1LG09g03570	CmoCh04G015180	Cucurbita moschata (Rifu)	cmocpeB651
Cp4.1LG09g03570	CmoCh18G009610	Cucurbita moschata (Rifu)	cmocpeB376
Cp4.1LG09g03570	Cla020475	Watermelon (97103) v1	cpewmB031
Cp4.1LG09g03570	Csa5G613490	Cucumber (Chinese Long) v2	cpecuB041
Cp4.1LG09g03570	MELO3C012333	Melon (DHL92) v3.5.1	cpemeB024
Cp4.1LG09g03570	ClCG05G021950	Watermelon (Charleston Gray)	cpewcgB045
Cp4.1LG09g03570	CSPI05G26150	Wild cucumber (PI 183967)	cpecpiB036
Cp4.1LG09g03570	Lsi04G001650	Bottle gourd (USVL1VR-Ls)	cpelsiB032
Cp4.1LG09g03570	MELO3C012333.2	Melon (DHL92) v3.6.1	cpemedB028
Cp4.1LG09g03570	CsaV3_5G035200	Cucumber (Chinese Long) v3	cpecucB0043
Cp4.1LG09g03570	Bhi07G000618	Wax gourd	cpewgoB0055
Cp4.1LG09g03570	CsGy5G025610	Cucumber (Gy14) v2	cgybcpeB581
Cp4.1LG09g03570	Carg19003	Silver-seed gourd	carcpeB1464
Cp4.1LG09g03570	Carg01893	Silver-seed gourd	carcpeB1169

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG09g03570	Cp4.1LG01g14230	Cucurbita pepo (Zucchini)	cpecpeB040

The following block(s) are covering this gene:

None