Lsi04G000580 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G000580
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTetraspanin family protein
Locationchr04 : 727710 .. 730405 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTACTTAGTGGTCATGTTGTTTCTAATAGCTACGCTTATGGGGTTGACAATTTTTGGATTTGTTGTGACCGGCGCAGGCGGAGGCGTAGAGGCGCCGGGTGGGAGGGTGTATAGAGAGTACCATTTGGAACAATACTCACCTTGGTTGAGGAAGAGAATTAAGGATCCAAGGTATTGGCTAACTATTAGGAGTTGTCTTCTGGGATCTAAGACTTGTGCTAAACTTGCTTCTTGGACTCCTCTTGATTATCTTGAGAGAGATATGACCCCAATTCAGGTGATGCTTCTTCTTTTTTATTTGTAAATTTGTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAAAAAACTAATTGTATAGATATTTCGTCTAATTAAAGGGACATTAAATGCTTATTTTTGAATTATAAAAAAGTAATTTGTATTTGACAATATTTAAATTAGTTTTAATTTTTGAAAGTTTAAGAGGTGTTCTTAATTAGTTTATTTATTTTTTTATTAAAAAAAACCAAATCTACTTAAAGAACTTTAGAAAACATTTTAGTTAATAGTGTTAAAATTTGGTTTCTGGTTTGAAAATGCTTTGTAATTGGCTAAAGATGGGATCAATTAATTTACTTTGATTATAGCTACAGAAATAAACATGTAATGAAATAAAGTGATACGTGTAACATAAAGTAAAATTTAGTTCATGTATTTGTAAGAAAATTTACTCTATAAATATGCTTTTAATATTTACATAGTAGAAAGCTTAATAAAAATAATAATTTTTTATAAAGAAAAATCAATAATAAACAGATAGTAAAACCCAAATTTTAAATTTATTAAAAATACATAGACTAATATTAAATAAGATATAGAAATCAATGATATTTTAATTTAATATAAATAATTTTAACGAAGTGATACAGAAACACTAAAAAAAAAGTTAAAAACAATATGCTATTTTAATGTTTAGTTTTACATTTTTAAAAGTGTTTTTATTTAAAATTGATTGAGGTCCAAACTTATTCTTACTACATATGTTAAGAACTTGAGATGTATTGATTTAATTTTTTTTTTTTTTTTTTTTTGAAATTTATGTTCACAGTCAGGTTGTTGTAAGCCGCCAACGGCGTGTAATTACGATATGATGGCAGCGGCAGCGATGGTGGCTCAAGATCCAGATTGTTATCGGTGGAACAATGCCCCTAACTTGCTATGCTACGAGTGTGACTCTTGCAAAGCCGGTGTCCTTGAGAACGTTCGAAGGGATTGGCATAAGCTCTCTGTTCTCAACGTCGTCGTTGTCGTCCTCCTCATTGGTGTTTATTGTGTCGGCTGTTGTGCCTTCCGCAACACCAAGAGGGCTGAGACCGACTACCCTTACGGTCACAATCGAATGACCAAAGTTCGACCGAGATGGGACTACTATTGGTATGTTCGTTTCTTAACTCATTCGTACCTATCATCTTATGAGTGAGTTTGTTAGAGTACTTTAATTTGAGAAGTTGAATTGTGTACAGGTCTATAGATTTAAATTTTTTTTTTTGACCGAATTACCATAGTTCAACTAGACTTAAAAGTTTTATTTTAATCGTTATATTTTTAAATGTCTAAATTTTTAGTTTCCGTATTTTTAAAATTTTAAAAATCATCCGAACGACTTTATTAATTTTCTCTTTAAAATTTTTGAAACATATTTAAATGGTGTATTTTCTTGTATAAAAAATATTTATTTAACCAATTATGATAAAATTAAACTTTAAATGATTAATTTTAATATTTATTAAAAGTAGAATAACTAAATTTAAATGAAATGACTCTTTTTTTATAGGTAGGCATAAAGAAAAATGCTATTTGACTTTTTTAGGGGATGCTTTTAGGTAAGGTATTTTTTTTAGTGATAAAATGTTCTTTCACTTTATTTCAAATTTAACCTCTAAGTAACTAAATAATTTTCATTAACCATCTTTTTAAATTCACAAATTAATGAGTGGACATTCCTAAAAAAAATAAAAATAAAGTAAACTATTTAAACTGTTTTGGACACCTATTATTAATATGACAACGTATACAAATAATTTTTGTTTTTTTGAGAAAATTAATAAAAACACTATCGGCGATAGAGTTTACCACTAATAGATTTTGTTATATTTACAATTCTTTTAAACGGTTGCTATACACTTAATTATTAAAAGTAATTCTCATTGTAATTATCCTATTAAAAAGTTATCCCAAAAACATTATTAAGACAGCTAGACAGGATAGAAAAGAAGTTACATTATTTAATAATTCTATTAGTTCAATATTATTGAAAGTAATTAGAAAGTTTTGTGCCGCGTGTGATGTGTCAAGATGATCTCTTTTATCAAGAAGAATTAGATTCTCTATTTTCAAAACTAAGTTAATATAGATCAATATTTCTACGTAAAGTTTATCTATTTATTTATTATTATCTTTTTTTTTTTTTTGCAGGTGGAGATGGTTGCATGACAAGAAAGAACAACTTTATTAACAGAGAAGAAATATTCCATCCTCCATTTCTAGTTGCTTATCACTTTTCTTGTTGAGAACATCAAAGAGTGGTCTCAAACTTCCCTTTTTACTTTTTTTTCTTCTTTTTCTCTTGTTTTGTATATACTTGTTTTTTCCTTACCATATAAAAATGGATTTTCACTTTTTATCTCAAACACATTCTCATTTACTTA

mRNA sequence

ATGGCTACGCTTATGGGGTTGACAATTTTTGGATTTGTTGTGACCGGCGCAGGCGGAGGCGTAGAGGCGCCGGGTGGGAGGGTGTATAGAGAGTACCATTTGGAACAATACTCACCTTGGTTGAGGAAGAGAATTAAGGATCCAAGGTATTGGCTAACTATTAGGAGTTGTCTTCTGGGATCTAAGACTTGTGCTAAACTTGCTTCTTGGACTCCTCTTGATTATCTTGAGAGAGATATGACCCCAATTCAGTCAGGTTGTTGTAAGCCGCCAACGGCGTGTAATTACGATATGATGGCAGCGGCAGCGATGGTGGCTCAAGATCCAGATTGTTATCGGTGGAACAATGCCCCTAACTTGCTATGCTACGAGTGTGACTCTTGCAAAGCCGGTGTCCTTGAGAACGTTCGAAGGGATTGGCATAAGCTCTCTGTTCTCAACGTCGTCGTTGTCGTCCTCCTCATTGGTGTTTATTGTGTCGGCTGTTGTGCCTTCCGCAACACCAAGAGGGCTGAGACCGACTACCCTTACGGTCACAATCGAATGACCAAAGTTCGACCGAGATGGGACTACTATTGGTGGAGATGGTTGCATGACAAGAAAGAACAACTTTATTAACAGAGAAGAAATATTCCATCCTCCATTTCTAGTTGCTTATCACTTTTCTTGTTGAGAACATCAAAGAGTGGTCTCAAACTTCCCTTTTTACTTTTTTTTCTTCTTTTTCTCTTGTTTTGTATATACTTGTTTTTTCCTTACCATATAAAAATGGATTTTCACTTTTTATCTCAAACACATTCTCATTTACTTA

Coding sequence (CDS)

ATGGCTACGCTTATGGGGTTGACAATTTTTGGATTTGTTGTGACCGGCGCAGGCGGAGGCGTAGAGGCGCCGGGTGGGAGGGTGTATAGAGAGTACCATTTGGAACAATACTCACCTTGGTTGAGGAAGAGAATTAAGGATCCAAGGTATTGGCTAACTATTAGGAGTTGTCTTCTGGGATCTAAGACTTGTGCTAAACTTGCTTCTTGGACTCCTCTTGATTATCTTGAGAGAGATATGACCCCAATTCAGTCAGGTTGTTGTAAGCCGCCAACGGCGTGTAATTACGATATGATGGCAGCGGCAGCGATGGTGGCTCAAGATCCAGATTGTTATCGGTGGAACAATGCCCCTAACTTGCTATGCTACGAGTGTGACTCTTGCAAAGCCGGTGTCCTTGAGAACGTTCGAAGGGATTGGCATAAGCTCTCTGTTCTCAACGTCGTCGTTGTCGTCCTCCTCATTGGTGTTTATTGTGTCGGCTGTTGTGCCTTCCGCAACACCAAGAGGGCTGAGACCGACTACCCTTACGGTCACAATCGAATGACCAAAGTTCGACCGAGATGGGACTACTATTGGTGGAGATGGTTGCATGACAAGAAAGAACAACTTTATTAA

Protein sequence

MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKKEQLY
Homology
[Close]
BLAST of Lsi04G000580 vs. Swiss-Prot
Match: TET6_ARATH (Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.8e-81
Identity = 135/206 (65.53%), Postives = 160/206 (77.67%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLT+FG VVT  GGGVE PG R+Y+EY L  Y PWLR+R++DP YW +IRSC+L 
Sbjct: 82  IATLMGLTLFGLVVTSQGGGVEVPG-RIYKEYRLGDYHPWLRERVRDPEYWNSIRSCILS 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+    A +V    DC+RWNN   +
Sbjct: 142 SKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYE----AGVVDGGGDCFRWNNGVEM 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDY-PYGH 180
           LCYECD+CKAGVLE +R DW KLSV+N++V+VLLI VY  GCCAF NT+ A   Y P   
Sbjct: 202 LCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCAFHNTRHAAHPYHPSDD 261

Query: 181 NRMTKVRPRWDYYWWRWLHDKKEQLY 206
           NRMT+VRPRWDYYWWRW H+KKEQLY
Sbjct: 262 NRMTRVRPRWDYYWWRWWHEKKEQLY 282

[Close]
BLAST of Lsi04G000580 vs. Swiss-Prot
Match: TET5_ARATH (Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.7e-73
Identity = 121/201 (60.20%), Postives = 155/201 (77.11%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +  LMGLT+FGF+VT   GGV   G RVY+E+ LE Y PWL+ R+ D  YW+TI++CLLG
Sbjct: 82  IVALMGLTLFGFIVTSHSGGVVVDG-RVYKEFKLEAYHPWLKTRVVDTNYWVTIKTCLLG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           S TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+      ++ QDPDCYRWNNA  +
Sbjct: 142 SVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYN---TDTVIQQDPDCYRWNNAATV 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAE-TDYPYGH 180
           LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VYCVGCCAF+N KR +   +PYG 
Sbjct: 202 LCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNAKRPQHYGFPYGR 261

Query: 181 NRMTKVRPRWDYYWWRWLHDK 201
             M+K RP W+  W RW H +
Sbjct: 262 YGMSKSRPGWEQSWSRWWHGR 278

[Close]
BLAST of Lsi04G000580 vs. Swiss-Prot
Match: TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.3e-41
Identity = 83/197 (42.13%), Postives = 115/197 (58.38%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A L+G TIF +VVT  G G      R Y +Y+L  YS WL+ R+ D  YW  I SC+  
Sbjct: 83  IAALIGFTIFAYVVTDKGSGRFVMNRR-YLDYYLNDYSGWLKDRVTDNGYWRDIGSCVRD 142

Query: 61  SKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAAAMVAQD 120
           S  C K+         T   +  R+++P++SGCCKPPT C Y  +          MV  +
Sbjct: 143 SGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGEMVGPN 202

Query: 121 PDCYRWNNAPNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNT 180
           PDC  WNN   LLCY+C SCKAGVL ++++ W K+SV+N+VVV++L+  Y + C A++N 
Sbjct: 203 PDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNV 262

Query: 181 KRAETDYPYGHNRMTKV 186
           KR   D P G  RMT +
Sbjct: 263 KRMYNDEPVGEARMTNL 278

[Close]
BLAST of Lsi04G000580 vs. Swiss-Prot
Match: TET3_ARATH (Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-39
Identity = 79/199 (39.70%), Postives = 114/199 (57.29%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A L+G  IF + VT  G G      R Y +Y+LE YS WL+ R+ D  YW  I SCL  
Sbjct: 83  IAALIGFIIFAYAVTDKGSG-RTVLNRGYLDYYLEDYSGWLKDRVSDDSYWGKISSCLRD 142

Query: 61  SKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAAAMVAQD 120
           S  C K+         T   +  R ++P++SGCCKPPT C +  +          M+  +
Sbjct: 143 SGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGGMIGPN 202

Query: 121 PDCYRWNNAPNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNT 180
            DC  W+N  ++LCY+C SCKAGVL ++++ W K+SV+N+VV+++L+  Y +   A+RN 
Sbjct: 203 QDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNV 262

Query: 181 KRAETDYPYGHNRMTKVRP 188
           KR + D P G  RMTK  P
Sbjct: 263 KRIDNDEPAGEARMTKSHP 280

[Close]
BLAST of Lsi04G000580 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-39
Identity = 78/177 (44.07%), Postives = 114/177 (64.41%), Query Frame = 1 

Query: 7   LTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLGSKTCAK 66
           +T+F FVVT  G G EA  G+ Y+EY L  YS WL+KR+++ + W  IRSCL+ SK C+K
Sbjct: 89  ITVFAFVVTNKGAG-EAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKIRSCLVESKVCSK 148

Query: 67  LASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQ------DPDCYRWNN 126
           L +     P++ + +  +T +QSGCCKP   C ++ +              +PDC  W+N
Sbjct: 149 LEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPTTWTKNTTGTHTNPDCQTWDN 208

Query: 127 APNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAET 174
           A   LC++C SCKAG+L+NV+  W K++++N+V +V LI VY VGCCAFRN KR ++
Sbjct: 209 AKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]
BLAST of Lsi04G000580 vs. TrEMBL
Match: A0A0A0KTM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623480 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 7.2e-119
Identity = 194/205 (94.63%), Postives = 202/205 (98.54%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLTIFGF+VT AGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG
Sbjct: 82  IATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAA AMV+QDPDCYRWNNAP L
Sbjct: 142 SKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMMAAGAMVSQDPDCYRWNNAPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLENVRRDWHKLSVLNVVVV+LLIGVYCVGCCAFRNTKRAETDYPYGHN
Sbjct: 202 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYCVGCCAFRNTKRAETDYPYGHN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           +MTKVRPRWDYYWWRWLHDKKEQLY
Sbjct: 262 QMTKVRPRWDYYWWRWLHDKKEQLY 286

[Close]
BLAST of Lsi04G000580 vs. TrEMBL
Match: A0A151U603_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_007397 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.6e-100
Identity = 164/205 (80.00%), Postives = 188/205 (91.71%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A LMGLTIFGF VT  GGGVE PG RVY+EYHL+ YSPWL+KRI+DPRYW TIRSC+LG
Sbjct: 82  IAALMGLTIFGFGVTSQGGGVEVPG-RVYKEYHLQDYSPWLKKRIQDPRYWNTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCAKLASWTPLDY++RDM+PIQSGCCKPPTAC Y++  A  M++QDPDCYRWNN+PNL
Sbjct: 142 SKTCAKLASWTPLDYMQRDMSPIQSGCCKPPTACTYNV--ATMMMSQDPDCYRWNNSPNL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE++RR+WHKLSVL V ++VLLIG+Y +GCCAFRNT+RAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDMRRNWHKLSVLTVTMLVLLIGIYSIGCCAFRNTRRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDY+WWRWLHD+KEQLY
Sbjct: 262 RMTKVRPRWDYHWWRWLHDRKEQLY 283

[Close]
BLAST of Lsi04G000580 vs. TrEMBL
Match: B9HU49_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22710g PE=4 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 7.5e-100
Identity = 168/205 (81.95%), Postives = 182/205 (88.78%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLTIFGFVVT  GGGVE PG RVY+EY LE YSPWLR RIKDP YW TIRSC+LG
Sbjct: 82  IATLMGLTIFGFVVTSQGGGVEVPG-RVYKEYRLEDYSPWLRNRIKDPDYWRTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+M  A   V QDPDCYRWNN P L
Sbjct: 142 SKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNMATA---VPQDPDCYRWNNVPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE+VRRDW KLSVLN+V+VVLLIG+Y  GCCAF+NT+RAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDVRRDWRKLSVLNIVMVVLLIGIYSTGCCAFQNTRRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDYYWWRW  DK+EQLY
Sbjct: 262 RMTKVRPRWDYYWWRWWQDKREQLY 282

[Close]
BLAST of Lsi04G000580 vs. TrEMBL
Match: B9HLM8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04120g PE=4 SV=2)

HSP 1 Score: 370.9 bits (951), Expect = 9.8e-100
Identity = 166/205 (80.98%), Postives = 183/205 (89.27%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A LMGLTIFGFVVT  GGGVE PG RVY+EY +E YSPWLR +IKDP YW TIRSC+LG
Sbjct: 82  IAALMGLTIFGFVVTSQGGGVEVPG-RVYKEYRIEDYSPWLRNKIKDPDYWRTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+    A  VAQDPDCYRWNNAP L
Sbjct: 142 SKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYN---TATAVAQDPDCYRWNNAPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE+VRRDWHKLSVLNVV++V LIG+Y +GCCAF+NT+RAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDVRRDWHKLSVLNVVMLVFLIGIYSIGCCAFQNTRRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDYYWWRW  DK+EQLY
Sbjct: 262 RMTKVRPRWDYYWWRWWQDKREQLY 282

[Close]
BLAST of Lsi04G000580 vs. TrEMBL
Match: A0A0S3SNN2_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G105900 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.9e-99
Identity = 165/205 (80.49%), Postives = 185/205 (90.24%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A LMGLTIFGF VT  GGGVE PG RVY+EYHL+ YSPWLRKRI+DPRYW TIRSC+LG
Sbjct: 82  IAALMGLTIFGFGVTSKGGGVEVPG-RVYKEYHLQDYSPWLRKRIQDPRYWSTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTC KLASWTPLDY++RDM+PIQSGCCKPPTAC Y+M  AA M+ QDPDCYRWNNAPNL
Sbjct: 142 SKTCEKLASWTPLDYMQRDMSPIQSGCCKPPTACTYNM--AAMMMTQDPDCYRWNNAPNL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE++R +WHKLSVL V ++VLLIG+Y +GCCAFRNTKRAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDIRGNWHKLSVLTVTMLVLLIGIYSIGCCAFRNTKRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDY+ WRWLHD++EQLY
Sbjct: 262 RMTKVRPRWDYHCWRWLHDRREQLY 283

[Close]
BLAST of Lsi04G000580 vs. TAIR10
Match: AT3G12090.1 (AT3G12090.1 tetraspanin6)

HSP 1 Score: 302.4 bits (773), Expect = 2.2e-82
Identity = 135/206 (65.53%), Postives = 160/206 (77.67%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLT+FG VVT  GGGVE PG R+Y+EY L  Y PWLR+R++DP YW +IRSC+L 
Sbjct: 82  IATLMGLTLFGLVVTSQGGGVEVPG-RIYKEYRLGDYHPWLRERVRDPEYWNSIRSCILS 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+    A +V    DC+RWNN   +
Sbjct: 142 SKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYE----AGVVDGGGDCFRWNNGVEM 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDY-PYGH 180
           LCYECD+CKAGVLE +R DW KLSV+N++V+VLLI VY  GCCAF NT+ A   Y P   
Sbjct: 202 LCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYAAGCCAFHNTRHAAHPYHPSDD 261

Query: 181 NRMTKVRPRWDYYWWRWLHDKKEQLY 206
           NRMT+VRPRWDYYWWRW H+KKEQLY
Sbjct: 262 NRMTRVRPRWDYYWWRWWHEKKEQLY 282

[Close]
BLAST of Lsi04G000580 vs. TAIR10
Match: AT4G23410.1 (AT4G23410.1 tetraspanin5)

HSP 1 Score: 276.9 bits (707), Expect = 9.7e-75
Identity = 121/201 (60.20%), Postives = 155/201 (77.11%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +  LMGLT+FGF+VT   GGV   G RVY+E+ LE Y PWL+ R+ D  YW+TI++CLLG
Sbjct: 82  IVALMGLTLFGFIVTSHSGGVVVDG-RVYKEFKLEAYHPWLKTRVVDTNYWVTIKTCLLG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           S TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+      ++ QDPDCYRWNNA  +
Sbjct: 142 SVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYN---TDTVIQQDPDCYRWNNAATV 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAE-TDYPYGH 180
           LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VYCVGCCAF+N KR +   +PYG 
Sbjct: 202 LCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYCVGCCAFKNAKRPQHYGFPYGR 261

Query: 181 NRMTKVRPRWDYYWWRWLHDK 201
             M+K RP W+  W RW H +
Sbjct: 262 YGMSKSRPGWEQSWSRWWHGR 278

[Close]
BLAST of Lsi04G000580 vs. TAIR10
Match: AT5G60220.1 (AT5G60220.1 tetraspanin4)

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 83/197 (42.13%), Postives = 115/197 (58.38%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A L+G TIF +VVT  G G      R Y +Y+L  YS WL+ R+ D  YW  I SC+  
Sbjct: 83  IAALIGFTIFAYVVTDKGSGRFVMNRR-YLDYYLNDYSGWLKDRVTDNGYWRDIGSCVRD 142

Query: 61  SKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAAAMVAQD 120
           S  C K+         T   +  R+++P++SGCCKPPT C Y  +          MV  +
Sbjct: 143 SGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTDCGYTYVNETVWIPGGEMVGPN 202

Query: 121 PDCYRWNNAPNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNT 180
           PDC  WNN   LLCY+C SCKAGVL ++++ W K+SV+N+VVV++L+  Y + C A++N 
Sbjct: 203 PDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVINIVVVIILVIFYVIACAAYQNV 262

Query: 181 KRAETDYPYGHNRMTKV 186
           KR   D P G  RMT +
Sbjct: 263 KRMYNDEPVGEARMTNL 278

[Close]
BLAST of Lsi04G000580 vs. TAIR10
Match: AT3G45600.1 (AT3G45600.1 tetraspanin3)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 79/199 (39.70%), Postives = 114/199 (57.29%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A L+G  IF + VT  G G      R Y +Y+LE YS WL+ R+ D  YW  I SCL  
Sbjct: 83  IAALIGFIIFAYAVTDKGSG-RTVLNRGYLDYYLEDYSGWLKDRVSDDSYWGKISSCLRD 142

Query: 61  SKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAAAMVAQD 120
           S  C K+         T   +  R ++P++SGCCKPPT C +  +          M+  +
Sbjct: 143 SGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTDCGFSYVNETGWDTRGGMIGPN 202

Query: 121 PDCYRWNNAPNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNT 180
            DC  W+N  ++LCY+C SCKAGVL ++++ W K+SV+N+VV+++L+  Y +   A+RN 
Sbjct: 203 QDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVINIVVLIILVIFYVIAYAAYRNV 262

Query: 181 KRAETDYPYGHNRMTKVRP 188
           KR + D P G  RMTK  P
Sbjct: 263 KRIDNDEPAGEARMTKSHP 280

[Close]
BLAST of Lsi04G000580 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8)

HSP 1 Score: 163.3 bits (412), Expect = 1.6e-40
Identity = 78/177 (44.07%), Postives = 114/177 (64.41%), Query Frame = 1 

Query: 7   LTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLGSKTCAK 66
           +T+F FVVT  G G EA  G+ Y+EY L  YS WL+KR+++ + W  IRSCL+ SK C+K
Sbjct: 89  ITVFAFVVTNKGAG-EAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKIRSCLVESKVCSK 148

Query: 67  LASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQ------DPDCYRWNN 126
           L +     P++ + +  +T +QSGCCKP   C ++ +              +PDC  W+N
Sbjct: 149 LEAKFVNVPVNSFYKEHLTALQSGCCKPSDECGFEYVNPTTWTKNTTGTHTNPDCQTWDN 208

Query: 127 APNLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAET 174
           A   LC++C SCKAG+L+NV+  W K++++N+V +V LI VY VGCCAFRN KR ++
Sbjct: 209 AKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNIVFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]
BLAST of Lsi04G000580 vs. NCBI nr
Match: gi|449449342|ref|XP_004142424.1| (PREDICTED: tetraspanin-6 [Cucumis sativus])

HSP 1 Score: 434.5 bits (1116), Expect = 1.0e-118
Identity = 194/205 (94.63%), Postives = 202/205 (98.54%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLTIFGF+VT AGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG
Sbjct: 82  IATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAA AMV+QDPDCYRWNNAP L
Sbjct: 142 SKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMMAAGAMVSQDPDCYRWNNAPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLENVRRDWHKLSVLNVVVV+LLIGVYCVGCCAFRNTKRAETDYPYGHN
Sbjct: 202 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYCVGCCAFRNTKRAETDYPYGHN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           +MTKVRPRWDYYWWRWLHDKKEQLY
Sbjct: 262 QMTKVRPRWDYYWWRWLHDKKEQLY 286

[Close]
BLAST of Lsi04G000580 vs. NCBI nr
Match: gi|659092104|ref|XP_008446901.1| (PREDICTED: tetraspanin-6 [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 2.3e-118
Identity = 193/205 (94.15%), Postives = 202/205 (98.54%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLTIFGF+VT AGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG
Sbjct: 82  IATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAA AMV+QDPDCYRWNNAP L
Sbjct: 142 SKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMMAAGAMVSQDPDCYRWNNAPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLENVRRDWHKLSVLNVVVV+LLIGVYCVGCCAFRNTKRAETDYPYGHN
Sbjct: 202 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYCVGCCAFRNTKRAETDYPYGHN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           +MTKVRPRWDYYWWRWLHDK+EQLY
Sbjct: 262 QMTKVRPRWDYYWWRWLHDKREQLY 286

[Close]
BLAST of Lsi04G000580 vs. NCBI nr
Match: gi|743895394|ref|XP_011040964.1| (PREDICTED: tetraspanin-6-like [Populus euphratica])

HSP 1 Score: 375.9 bits (964), Expect = 4.4e-101
Identity = 170/205 (82.93%), Postives = 184/205 (89.76%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLTIFGFVVT  GGGVE PG RVY+EY LE YSPWLR RIKDP YW TIRSC+LG
Sbjct: 82  IATLMGLTIFGFVVTSQGGGVEVPG-RVYKEYRLEDYSPWLRNRIKDPDYWRTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+M  A   V QDPDCYRWNNAP L
Sbjct: 142 SKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNMATA---VPQDPDCYRWNNAPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE+VRRDWHKLSVLN+V+VVLLIG+Y  GCCAF+NT+RAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDVRRDWHKLSVLNIVMVVLLIGIYSTGCCAFQNTRRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDYYWWRW  DK+EQLY
Sbjct: 262 RMTKVRPRWDYYWWRWWQDKREQLY 282

[Close]
BLAST of Lsi04G000580 vs. NCBI nr
Match: gi|1000937104|ref|XP_002534549.2| (PREDICTED: tetraspanin-6 [Ricinus communis])

HSP 1 Score: 375.6 bits (963), Expect = 5.7e-101
Identity = 166/205 (80.98%), Postives = 187/205 (91.22%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +ATLMGLTIFGFVVT  GGGV+ PG RVY+EY LE YSPWLR R+KDP YW TIRSC+LG
Sbjct: 82  IATLMGLTIFGFVVTSQGGGVDVPG-RVYKEYRLEDYSPWLRDRVKDPDYWRTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           S+TCAKLASWTPLDY+E+DM+ IQSGCCKPPT+CNY+M   A +V QDPDCYRWNN+P L
Sbjct: 142 SRTCAKLASWTPLDYMEKDMSHIQSGCCKPPTSCNYNM---ATLVPQDPDCYRWNNSPTL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE+VRRDWHKLSVLN+V++VLLIG+Y +GCCAFRNT+RAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVLLIGIYSIGCCAFRNTRRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDYYWWRWLHDK+EQLY
Sbjct: 262 RMTKVRPRWDYYWWRWLHDKREQLY 282

[Close]
BLAST of Lsi04G000580 vs. NCBI nr
Match: gi|1012363526|gb|KYP74709.1| (hypothetical protein KK1_007397 [Cajanus cajan])

HSP 1 Score: 372.9 bits (956), Expect = 3.7e-100
Identity = 164/205 (80.00%), Postives = 188/205 (91.71%), Query Frame = 1 

Query: 1   MATLMGLTIFGFVVTGAGGGVEAPGGRVYREYHLEQYSPWLRKRIKDPRYWLTIRSCLLG 60
           +A LMGLTIFGF VT  GGGVE PG RVY+EYHL+ YSPWL+KRI+DPRYW TIRSC+LG
Sbjct: 82  IAALMGLTIFGFGVTSQGGGVEVPG-RVYKEYHLQDYSPWLKKRIQDPRYWNTIRSCILG 141

Query: 61  SKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAAAMVAQDPDCYRWNNAPNL 120
           SKTCAKLASWTPLDY++RDM+PIQSGCCKPPTAC Y++  A  M++QDPDCYRWNN+PNL
Sbjct: 142 SKTCAKLASWTPLDYMQRDMSPIQSGCCKPPTACTYNV--ATMMMSQDPDCYRWNNSPNL 201

Query: 121 LCYECDSCKAGVLENVRRDWHKLSVLNVVVVVLLIGVYCVGCCAFRNTKRAETDYPYGHN 180
           LCYECDSCKAGVLE++RR+WHKLSVL V ++VLLIG+Y +GCCAFRNT+RAETDYPYG N
Sbjct: 202 LCYECDSCKAGVLEDMRRNWHKLSVLTVTMLVLLIGIYSIGCCAFRNTRRAETDYPYGEN 261

Query: 181 RMTKVRPRWDYYWWRWLHDKKEQLY 206
           RMTKVRPRWDY+WWRWLHD+KEQLY
Sbjct: 262 RMTKVRPRWDYHWWRWLHDRKEQLY 283

The following BLAST results are available for this feature:
BLAST of Lsi04G000580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TET6_ARATH3.8e-8165.53Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1[more]
TET5_ARATH1.7e-7360.20Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1[more]
TET4_ARATH2.3e-4142.13Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1[more]
TET3_ARATH2.8e-3939.70Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1[more]
TET8_ARATH2.8e-3944.07Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1[more]
BLAST of Lsi04G000580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTM6_CUCSA7.2e-11994.63Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623480 PE=4 SV=1[more]
A0A151U603_CAJCA2.6e-10080.00Uncharacterized protein OS=Cajanus cajan GN=KK1_007397 PE=3 SV=1[more]
B9HU49_POPTR7.5e-10081.95Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22710g PE=4 SV=2[more]
B9HLM8_POPTR9.8e-10080.98Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04120g PE=4 SV=2[more]
A0A0S3SNN2_PHAAN2.9e-9980.49Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G105900 PE=... [more]
BLAST of Lsi04G000580 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12090.12.2e-8265.53 tetraspanin6[more]
AT4G23410.19.7e-7560.20 tetraspanin5[more]
AT5G60220.11.3e-4242.13 tetraspanin4[more]
AT3G45600.11.6e-4039.70 tetraspanin3[more]
AT2G23810.11.6e-4044.07 tetraspanin8[more]
BLAST of Lsi04G000580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449449342|ref|XP_004142424.1|1.0e-11894.63PREDICTED: tetraspanin-6 [Cucumis sativus][more]
gi|659092104|ref|XP_008446901.1|2.3e-11894.15PREDICTED: tetraspanin-6 [Cucumis melo][more]
gi|743895394|ref|XP_011040964.1|4.4e-10182.93PREDICTED: tetraspanin-6-like [Populus euphratica][more]
gi|1000937104|ref|XP_002534549.2|5.7e-10180.98PREDICTED: tetraspanin-6 [Ricinus communis][more]
gi|1012363526|gb|KYP74709.1|3.7e-10080.00hypothetical protein KK1_007397 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR018499Tetraspanin/Peripherin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G000580.1Lsi04G000580.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018499Tetraspanin/PeripherinPFAMPF00335Tetraspannincoord: 3..164
score: 2.0
NoneNo IPR availablePANTHERPTHR32191FAMILY NOT NAMEDcoord: 1..184
score: 6.4E
NoneNo IPR availablePANTHERPTHR32191:SF1TETRASPANIN-5-RELATEDcoord: 1..184
score: 6.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G000580Csa5G623480Cucumber (Chinese Long) v2culsiB368
Lsi04G000580CSPI05G27280Wild cucumber (PI 183967)cpilsiB372
Lsi04G000580Cucsa.308260Cucumber (Gy14) v1cgylsiB497
Lsi04G000580CmaCh15G004480Cucurbita maxima (Rimu)cmalsiB279
Lsi04G000580CmaCh04G013580Cucurbita maxima (Rimu)cmalsiB669
Lsi04G000580CmaCh04G025860Cucurbita maxima (Rimu)cmalsiB684
Lsi04G000580CmoCh04G014320Cucurbita moschata (Rifu)cmolsiB660
Lsi04G000580CmoCh15G004560Cucurbita moschata (Rifu)cmolsiB268
Lsi04G000580CmoCh04G027070Cucurbita moschata (Rifu)cmolsiB676
Lsi04G000580Cla020574Watermelon (97103) v1lsiwmB312
Lsi04G000580MELO3C012439Melon (DHL92) v3.5.1lsimeB281
Lsi04G000580ClCG05G020900Watermelon (Charleston Gray)lsiwcgB283
Lsi04G000580MELO3C012439.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G000580Bhi07G000747Wax gourdlsiwgoB387
Lsi04G000580Cp4.1LG01g24330Cucurbita pepo (Zucchini)cpelsiB365
Lsi04G000580Cp4.1LG01g15010Cucurbita pepo (Zucchini)cpelsiB352
Lsi04G000580Cp4.1LG13g09880Cucurbita pepo (Zucchini)cpelsiB151
Lsi04G000580CsGy5G026670Cucumber (Gy14) v2cgyblsiB337
Lsi04G000580Carg04548Silver-seed gourdcarlsiB627
Lsi04G000580Carg01965Silver-seed gourdcarlsiB767
Lsi04G000580Carg02398Silver-seed gourdcarlsiB240
Lsi04G000580CsaV3_5G036410Cucumber (Chinese Long) v3cuclsiB393
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G000580Silver-seed gourdcarlsiB437
Lsi04G000580Watermelon (97103) v2lsiwmbB284
Lsi04G000580Watermelon (97103) v2lsiwmbB300
Lsi04G000580Cucurbita maxima (Rimu)cmalsiB379
Lsi04G000580Cucurbita moschata (Rifu)cmolsiB364
Lsi04G000580Cucurbita moschata (Rifu)cmolsiB750
Lsi04G000580Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G000580Watermelon (Charleston Gray)lsiwcgB300
Lsi04G000580Watermelon (97103) v1lsiwmB289