Carg01965 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01965
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Tetraspanin family protein
Location	Cucurbita_argyrosperma_scaffold_003 : 1435980 .. 1437792 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACACGACCAACCAAATTGCACAAAAGGGAACCCCAAAAGCTCCGGTATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTTATGTTGGTTCTAATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTTACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTCCTTGGACTCCTCTTGATTATCTTGAAAGAGATATGACCCCGATTCAGGTGATGCTTTTATTTTTTTTAATGGCTCGTTACGTATAGCTGTCTGCGTCTGTTGGAAAAAGGTTTTTACATTTTGTAAGGAATGTTTCGTTCTCATTCTCTAACTGATGTGGGATCTCACAATCCACCCATTTGAGGGTCTAGCATCCTCGCTCACACACCGCTTAGTAACTGGCTCTGATACCAAATTCAGGTACTGAATGGTGTGCAATGGAGGATACTGGGCCCTCAGGAGGATGAGTTGTGAGATCTCACGTGAGGATGTTGGGTTTTTGAGGGGGTGGATTGTGAGATTCTAAATCGGTTGGAGAGGGGAATGAAATATTTGTTATCGAGTGTGGAAACCTCTCACAATCTACTCCCTTGAGGGCCTGGCATCCTCGCTCACATACTACTCAGAGTGGCTTTGATACCAAAGTCAAGTATCGAACGGTGTGCTAGCGAGAATGTTGGGCCATCAAAGGGGTGGTGTGTGAGATTCCACGTGAAGACGTTGGGCCCACAAAAGGGTGAATTGTGATATCTCATATCGGTTGGAGAAGGGAACGAAATATTTCTTATAAACATGTGGAAACCTCTTACGAGTAGACGCGTTTTTAAATTCACGAGACTAACAACATTACTTATCAAATTAAAGTGAACAGTTTCTGCTAGCTATGGGCTTGAGTTATTACACAATAATTCTTAGAGTTAGTAGTAAATTTTAATTGCATTAGTCGTAAATTTTCGTTGAAATGAATTAAATGGTAAAAATAATTTGTATGCAAGAATATATATAACAATGACCGGCTACAATTATAACAAGAAATTGAGATACATAATTATTATTATATTTTTTTTAAAAAGGAAATTTATGTCGACAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGTGGGGGCGGTGGTGGCTCAGGATCCCGATTGCTACCGGTGGAACAATGCCCCTAACTTGCTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGACTGGCACAAGCTCTCCGTCCTCAACGTCGTCGTTGTCGTCCTCCTCATCGGCGTTTACTCTGTCGGCTGCTGTGCCTTCCGTAACACCAAGAGGGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTACTATTGGTACGTTTTCTAAAATAGGTTAAATAAATAAAAAATTCTTAAATTTTATACTTTAAATACTTGAAATACAATTTTTTAATT

mRNA sequence

ACACACGACCAACCAAATTGCACAAAAGGGAACCCCAAAAGCTCCGGTATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTTATGTTGGTTCTAATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTTACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTCCTTGGACTCCTCTTGATTATCTTGAAAGAGATATGACCCCGATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGTGGGGGCGGTGGTGGCTCAGGATCCCGATTGCTACCGGTGGAACAATGCCCCTAACTTGCTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGACTGGCACAAGCTCTCCGTCCTCAACGTCGTCGTTGTCGTCCTCCTCATCGGCGTTTACTCTGTCGGCTGCTGTGCCTTCCGTAACACCAAGAGGGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTACTATTGGTACGTTTTCTAAAATAGGTTAAATAAATAAAAAATTCTTAAATTTTATACTTTAAATACTTGAAATACAATTTTTTAATT

Coding sequence (CDS)

ATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTTATGTTGGTTCTAATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTTACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTCCTTGGACTCCTCTTGATTATCTTGAAAGAGATATGACCCCGATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGTGGGGGCGGTGGTGGCTCAGGATCCCGATTGCTACCGGTGGAACAATGCCCCTAACTTGCTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGACTGGCACAAGCTCTCCGTCCTCAACGTCGTCGTTGTCGTCCTCCTCATCGGCGTTTACTCTGTCGGCTGCTGTGCCTTCCGTAACACCAAGAGGGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTACTATTGGTACGTTTTCTAA

Protein sequence

MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMMAVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWYVF

Homology

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BLAST of Carg01965 vs. NCBI nr
Match: XP_022957333.1 (tetraspanin-6 [Cucurbita moschata])

HSP 1 Score: 569.7 bits (1467), Expect = 5.4e-159
Identity = 271/275 (98.55%), Postives = 273/275 (99.27%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG
Sbjct: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKRVKDPRYWVTIRSCVLGSKTCAKLA WTPLDYLERDMTPIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           A GAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYS
Sbjct: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRRDWHKLSVLNVVVVVLLIGVYS 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYW+
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWW 275

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BLAST of Carg01965 vs. NCBI nr
Match: XP_022991334.1 (tetraspanin-6 [Cucurbita maxima])

HSP 1 Score: 567.8 bits (1462), Expect = 2.1e-158
Identity = 270/275 (98.18%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKRVKDPRYWVTIRSCVLGSKTCAKLA WTPLDYLERDMTPIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           A GAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS
Sbjct: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           +GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYW+
Sbjct: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWW 275

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BLAST of Carg01965 vs. NCBI nr
Match: XP_023544308.1 (tetraspanin-6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 563.1 bits (1450), Expect = 5.1e-157
Identity = 271/277 (97.83%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 35  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 94

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG
Sbjct: 95  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 154

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKRVKDPRYWVTIRSCVLGSKTCAKLA WTPLDYLERDMTPIQSGCCKPPTACNYDMM
Sbjct: 155 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 214

Query: 181 A--VGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGV 240
           A   GAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGV
Sbjct: 215 AAGAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGV 274

Query: 241 YSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           YSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYW+
Sbjct: 275 YSVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWW 311

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BLAST of Carg01965 vs. NCBI nr
Match: XP_004142424.1 (PREDICTED: tetraspanin-6 [Cucumis sativus] >KGN52284.1 hypothetical protein Csa_5G623480 [Cucumis sativus])

HSP 1 Score: 540.8 bits (1392), Expect = 2.7e-150
Identity = 253/275 (92.00%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LA WTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           A GA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           VGCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYW+
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWW 275

[Close]

BLAST of Carg01965 vs. NCBI nr
Match: XP_008446901.1 (PREDICTED: tetraspanin-6 [Cucumis melo])

HSP 1 Score: 540.8 bits (1392), Expect = 2.7e-150
Identity = 253/275 (92.00%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LA WTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           A GA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           VGCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYW+
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWW 275

[Close]

BLAST of Carg01965 vs. TAIR10
Match: AT3G12090.1 (tetraspanin6)

HSP 1 Score: 406.0 bits (1042), Expect = 1.9e-113
Identity = 192/276 (69.57%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVM+ LIATLMGLT+FG VVT  GGGVE P GR+Y+EY L  Y  
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVP-GRIYKEYRLGDYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR+RV+DP YW +IRSC+L SKTC K+  WT LDY +RDMT +QSGCCKPPTAC Y+  
Sbjct: 121 WLRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYE-- 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               VV    DC+RWNN   +LCYECD+CKAGVLE++R DW KLSV+N++V+VLLI VY+
Sbjct: 181 --AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 240

Query: 241 VGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWY 276
            GCCAF NT+ A   Y P   NRMT+VRPRWDYYW+
Sbjct: 241 AGCCAFHNTRHAAHPYHPSDDNRMTRVRPRWDYYWW 271

[Close]

BLAST of Carg01965 vs. TAIR10
Match: AT4G23410.1 (tetraspanin5)

HSP 1 Score: 344.7 bits (883), Expect = 5.1e-95
Identity = 161/275 (58.55%), Postives = 203/275 (73.82%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           +GAC +VAW               LMGLT+FGF+VT   GGV    GRVY+E+ LE Y  
Sbjct: 61  VGACCDVAWVXXXXXXXXXXXXXALMGLTLFGFIVTSHSGGV-VVDGRVYKEFKLEAYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+  
Sbjct: 121 WLKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYN-- 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               V+ QDPDCYRWNNA  +LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VY 
Sbjct: 181 -TDTVIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYC 240

Query: 241 VGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYW 275
           VGCCAF+N KR +   +PYG   M+K RP W+  W
Sbjct: 241 VGCCAFKNAKRPQHYGFPYGRYGMSKSRPGWEQSW 271

[Close]

BLAST of Carg01965 vs. TAIR10
Match: AT5G60220.1 (tetraspanin4)

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-61
Identity = 118/278 (42.45%), Postives = 162/278 (58.27%), Query Frame = 0


Query: 3   RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGF 62
           R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG 
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 122
            GAC+   + +W+YL  M  +IA L+G TIF +VVT  G G      R Y +Y+L  YSG
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSG-RFVMNRRYLDYYLNDYSG 121

Query: 123 WLRKRVKDPRYWVTIRSCVLGSKTCAKL------APWTPLDYLERDMTPIQSGCCKPPTA 182
           WL+ RV D  YW  I SCV  S  C K+       P T   +  R+++P++SGCCKPPT 
Sbjct: 122 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 181

Query: 183 CNYD------MMAVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLN 242
           C Y        +  G +V  +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N
Sbjct: 182 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKV 267
                         C A++N KR   D P G  RMT +
Sbjct: 242 XXXXXXXXXXXXXACAAYQNVKRMYNDEPVGEARMTNL 278

[Close]

BLAST of Carg01965 vs. TAIR10
Match: AT4G30430.1 (tetraspanin9)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-60
Identity = 109/271 (40.22%), Postives = 169/271 (62.36%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTT-CESFLQTPLLVVGFVVLVVSLAG 60
           M RFSN+++G LN F  + S+PI+  G+W++  +TT CE FL  P++ +G  ++++++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  FIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYS 120
            +G+C  V W LW YL VM  LI  ++  TIF FVVT  G G E   G+ Y+EY LE YS
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSG-ETIQGKAYKEYRLEAYS 120

Query: 121 GWLRKRVKDPRYWVTIRSCVLGSKTCAKL----APWTPLDYLERDMTPIQSGCCKPPTAC 180
            WL++RV + ++W +IRSC+  SK C  L    A  T  D+ + D+T  +SGCCKP   C
Sbjct: 121 DWLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDC 180

Query: 181 NYDMMA-----VGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVV 240
           ++  +        +   ++ DC  W+N  + LCY C +CKAG L++++  W +++++N++
Sbjct: 181 DFTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNII 240

Query: 241 VVVLLIGVYSVGCCAFRNTKRAETDYPYGHN 262
            +VLL+ VY++GCCAFRN K        G N
Sbjct: 241 FLVLLVVVYAMGCCAFRNNKEDRYGRSNGFN 270

[Close]

BLAST of Carg01965 vs. TAIR10
Match: AT2G23810.1 (tetraspanin8)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 112/265 (42.26%), Postives = 163/265 (61.51%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAG 60
           M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  FIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYS 120
            IG+C  V W LWV               T+F FVVT  G G EA  G+ Y+EY L  YS
Sbjct: 61  LIGSCCRVTWLLWVXXXXXXXXXXXXXXXTVFAFVVTNKGAG-EAIEGKGYKEYKLGDYS 120

Query: 121 GWLRKRVKDPRYWVTIRSCVLGSKTCAKLAPW---TPLD-YLERDMTPIQSGCCKPPTAC 180
            WL+KRV++ + W  IRSC++ SK C+KL       P++ + +  +T +QSGCCKP   C
Sbjct: 121 TWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDEC 180

Query: 181 NYDMMAVGAVVAQ------DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNV 240
            ++ +              +PDC  W+NA   LC++C SCKAG+L++V+  W K++++N+
Sbjct: 181 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 240

Query: 241 VVVVLLIGVYSVGCCAFRNTKRAET 255
           V +V LI VYSVGCCAFRN KR ++
Sbjct: 241 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Carg01965 vs. Swiss-Prot
Match: sp|Q9C7C1|TET6_ARATH (Tetraspanin-6 OS=Arabidopsis thaliana OX=3702 GN=TET6 PE=2 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.4e-112
Identity = 192/276 (69.57%), Postives = 224/276 (81.16%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVM+ LIATLMGLT+FG VVT  GGGVE P GR+Y+EY L  Y  
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVP-GRIYKEYRLGDYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR+RV+DP YW +IRSC+L SKTC K+  WT LDY +RDMT +QSGCCKPPTAC Y+  
Sbjct: 121 WLRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYE-- 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               VV    DC+RWNN   +LCYECD+CKAGVLE++R DW KLSV+N++V+VLLI VY+
Sbjct: 181 --AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 240

Query: 241 VGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWY 276
            GCCAF NT+ A   Y P   NRMT+VRPRWDYYW+
Sbjct: 241 AGCCAFHNTRHAAHPYHPSDDNRMTRVRPRWDYYWW 271

[Close]

BLAST of Carg01965 vs. Swiss-Prot
Match: sp|Q84WF6|TET5_ARATH (Tetraspanin-5 OS=Arabidopsis thaliana OX=3702 GN=TET5 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 9.3e-94
Identity = 161/275 (58.55%), Postives = 203/275 (73.82%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           +GAC +VAW               LMGLT+FGF+VT   GGV    GRVY+E+ LE Y  
Sbjct: 61  VGACCDVAWVXXXXXXXXXXXXXALMGLTLFGFIVTSHSGGV-VVDGRVYKEFKLEAYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+  
Sbjct: 121 WLKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYN-- 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               V+ QDPDCYRWNNA  +LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VY 
Sbjct: 181 -TDTVIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYC 240

Query: 241 VGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYW 275
           VGCCAF+N KR +   +PYG   M+K RP W+  W
Sbjct: 241 VGCCAFKNAKRPQHYGFPYGRYGMSKSRPGWEQSW 271

[Close]

BLAST of Carg01965 vs. Swiss-Prot
Match: sp|Q9LSS4|TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 6.7e-60
Identity = 118/278 (42.45%), Postives = 162/278 (58.27%), Query Frame = 0


Query: 3   RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGF 62
           R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG 
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 122
            GAC+   + +W+YL  M  +IA L+G TIF +VVT  G G      R Y +Y+L  YSG
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSG-RFVMNRRYLDYYLNDYSG 121

Query: 123 WLRKRVKDPRYWVTIRSCVLGSKTCAKL------APWTPLDYLERDMTPIQSGCCKPPTA 182
           WL+ RV D  YW  I SCV  S  C K+       P T   +  R+++P++SGCCKPPT 
Sbjct: 122 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 181

Query: 183 CNYD------MMAVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLN 242
           C Y        +  G +V  +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N
Sbjct: 182 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVVVVLLIGVYSVGCCAFRNTKRAETDYPYGHNRMTKV 267
                         C A++N KR   D P G  RMT +
Sbjct: 242 XXXXXXXXXXXXXACAAYQNVKRMYNDEPVGEARMTNL 278

[Close]

BLAST of Carg01965 vs. Swiss-Prot
Match: sp|Q9M0B7|TET9_ARATH (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.3e-59
Identity = 109/271 (40.22%), Postives = 169/271 (62.36%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTT-CESFLQTPLLVVGFVVLVVSLAG 60
           M RFSN+++G LN F  + S+PI+  G+W++  +TT CE FL  P++ +G  ++++++AG
Sbjct: 1   MVRFSNSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALGVFLMIIAIAG 60

Query: 61  FIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYS 120
            +G+C  V W LW YL VM  LI  ++  TIF FVVT  G G E   G+ Y+EY LE YS
Sbjct: 61  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSG-ETIQGKAYKEYRLEAYS 120

Query: 121 GWLRKRVKDPRYWVTIRSCVLGSKTCAKL----APWTPLDYLERDMTPIQSGCCKPPTAC 180
            WL++RV + ++W +IRSC+  SK C  L    A  T  D+ + D+T  +SGCCKP   C
Sbjct: 121 DWLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFESGCCKPSNDC 180

Query: 181 NYDMMA-----VGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVV 240
           ++  +        +   ++ DC  W+N  + LCY C +CKAG L++++  W +++++N++
Sbjct: 181 DFTYITSTTWNKTSGTHKNSDCQLWDNEKHKLCYNCKACKAGFLDNLKAAWKRVAIVNII 240

Query: 241 VVVLLIGVYSVGCCAFRNTKRAETDYPYGHN 262
            +VLL+ VY++GCCAFRN K        G N
Sbjct: 241 FLVLLVVVYAMGCCAFRNNKEDRYGRSNGFN 270

[Close]

BLAST of Carg01965 vs. Swiss-Prot
Match: sp|Q8S8Q6|TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 112/265 (42.26%), Postives = 163/265 (61.51%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAG 60
           M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  FIGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYS 120
            IG+C  V W LWV               T+F FVVT  G G EA  G+ Y+EY L  YS
Sbjct: 61  LIGSCCRVTWLLWVXXXXXXXXXXXXXXXTVFAFVVTNKGAG-EAIEGKGYKEYKLGDYS 120

Query: 121 GWLRKRVKDPRYWVTIRSCVLGSKTCAKLAPW---TPLD-YLERDMTPIQSGCCKPPTAC 180
            WL+KRV++ + W  IRSC++ SK C+KL       P++ + +  +T +QSGCCKP   C
Sbjct: 121 TWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDEC 180

Query: 181 NYDMMAVGAVVAQ------DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNV 240
            ++ +              +PDC  W+NA   LC++C SCKAG+L++V+  W K++++N+
Sbjct: 181 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 240

Query: 241 VVVVLLIGVYSVGCCAFRNTKRAET 255
           V +V LI VYSVGCCAFRN KR ++
Sbjct: 241 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of Carg01965 vs. TrEMBL
Match: tr|A0A1S3BFM9|A0A1S3BFM9_CUCME (tetraspanin-6 OS=Cucumis melo OX=3656 GN=LOC103489478 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.8e-150
Identity = 253/275 (92.00%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LA WTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           A GA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           VGCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYW+
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWW 275

[Close]

BLAST of Carg01965 vs. TrEMBL
Match: tr|A0A0A0KTM6|A0A0A0KTM6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623480 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 1.8e-150
Identity = 253/275 (92.00%), Postives = 267/275 (97.09%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LA WTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           A GA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           VGCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYW+
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWW 275

[Close]

BLAST of Carg01965 vs. TrEMBL
Match: tr|A0A2P5CPV5|A0A2P5CPV5_9ROSA (Tetraspanin/Peripherin OS=Trema orientalis OX=63057 GN=TorRG33x02_277380 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 2.2e-140
Identity = 240/276 (86.96%), Postives = 259/276 (93.84%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVL+VSLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVML LIATLMGLT+FGFVVTGPGGGVE P GRVY+EYHLE+YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLFLIATLMGLTVFGFVVTGPGGGVEVP-GRVYKEYHLEKYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNY-DM 180
           WL  R+KDPRYW TIRSC+LGSKTCAKLA WTPLDYLE+DMTPIQSGCCKPPTACNY ++
Sbjct: 121 WLTTRIKDPRYWSTIRSCILGSKTCAKLALWTPLDYLEKDMTPIQSGCCKPPTACNYNNV 180

Query: 181 MAVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVY 240
           MA G  +AQDPDCYRWNNAPNLLCYECDSCKAGVLED+R DWHKLSVLN+VV+V LIG+Y
Sbjct: 181 MAAG--LAQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRTDWHKLSVLNIVVLVFLIGIY 240

Query: 241 SVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           S+GCCAF+NTKRAETDYPYG NRM  VRPRWDYYW+
Sbjct: 241 SIGCCAFQNTKRAETDYPYGENRMKLVRPRWDYYWW 273

[Close]

BLAST of Carg01965 vs. TrEMBL
Match: tr|A0A2P5CBX0|A0A2P5CBX0_PARAD (Tetraspanin/Peripherin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_165870 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.4e-139
Identity = 238/276 (86.23%), Postives = 258/276 (93.48%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVL+VSLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVML L ATLMGLT+FGFVVTGPGGGVE P GRVY+EYHLE+YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLFLTATLMGLTVFGFVVTGPGGGVEVP-GRVYKEYHLEKYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNY-DM 180
           WL  R+KDPRYW TIRSC+LGSKTCAKLA WTPLDYLE+DMTPIQSGCCKPPTACNY ++
Sbjct: 121 WLTNRIKDPRYWSTIRSCILGSKTCAKLALWTPLDYLEKDMTPIQSGCCKPPTACNYNNV 180

Query: 181 MAVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVY 240
           MA G  +AQDPDCYRWNNAPNLLCYECDSCKAGVLED+R DWHKLSVLN+V++V LIG+Y
Sbjct: 181 MAAG--LAQDPDCYRWNNAPNLLCYECDSCKAGVLEDIRTDWHKLSVLNIVMLVFLIGIY 240

Query: 241 SVGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           S+GCCAF+NTKRAETDYPYG NRM  VRPRWDYYW+
Sbjct: 241 SIGCCAFQNTKRAETDYPYGENRMKLVRPRWDYYWW 273

[Close]

BLAST of Carg01965 vs. TrEMBL
Match: tr|A0A067E3K6|A0A067E3K6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g023538mg PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 5.0e-137
Identity = 232/275 (84.36%), Postives = 254/275 (92.36%), Query Frame = 0


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIG GLWMARSSTTCESFLQTPLLV+GFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLVLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLM LTIFGFVVT  GGGV+ P GRVY+EYHL+ YS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVP-GRVYKEYHLQDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAPWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR RVKDP YW TIRSC+LGSKTCAKLA WTPLDYLERDMTPIQSGCCKPPT+CNY+M 
Sbjct: 121 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNM- 180

Query: 181 AVGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
                +AQDPDCYRWNNAP LLCYECDSCKAGVLEDVRRDWHKLSVLN+V++V+LIG+YS
Sbjct: 181 ---PTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYS 240

Query: 241 VGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWY 276
           +GCCAF+NT+RA+TDYPYG N+MTKVRPRWDYYW+
Sbjct: 241 IGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWW 270

The following BLAST results are available for this feature:

BLAST of Carg01965 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957333.1	5.4e-159	98.55	tetraspanin-6 [Cucurbita moschata]	[more]
XP_022991334.1	2.1e-158	98.18	tetraspanin-6 [Cucurbita maxima]	[more]
XP_023544308.1	5.1e-157	97.83	tetraspanin-6 [Cucurbita pepo subsp. pepo]	[more]
XP_004142424.1	2.7e-150	92.00	PREDICTED: tetraspanin-6 [Cucumis sativus] >KGN52284.1 hypothetical protein Csa_...	[more]
XP_008446901.1	2.7e-150	92.00	PREDICTED: tetraspanin-6 [Cucumis melo]	[more]

BLAST of Carg01965 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12090.1	1.9e-113	69.57	tetraspanin6	[more]
AT4G23410.1	5.1e-95	58.55	tetraspanin5	[more]
AT5G60220.1	3.7e-61	42.45	tetraspanin4	[more]
AT4G30430.1	1.8e-60	40.22	tetraspanin9	[more]
AT2G23810.1	6.6e-58	42.26	tetraspanin8	[more]

BLAST of Carg01965 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C7C1\|TET6_ARATH	3.4e-112	69.57	Tetraspanin-6 OS=Arabidopsis thaliana OX=3702 GN=TET6 PE=2 SV=1	[more]
sp\|Q84WF6\|TET5_ARATH	9.3e-94	58.55	Tetraspanin-5 OS=Arabidopsis thaliana OX=3702 GN=TET5 PE=2 SV=1	[more]
sp\|Q9LSS4\|TET4_ARATH	6.7e-60	42.45	Tetraspanin-4 OS=Arabidopsis thaliana OX=3702 GN=TET4 PE=3 SV=1	[more]
sp\|Q9M0B7\|TET9_ARATH	3.3e-59	40.22	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
sp\|Q8S8Q6\|TET8_ARATH	1.2e-56	42.26	Tetraspanin-8 OS=Arabidopsis thaliana OX=3702 GN=TET8 PE=2 SV=1	[more]

BLAST of Carg01965 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BFM9\|A0A1S3BFM9_CUCME	1.8e-150	92.00	tetraspanin-6 OS=Cucumis melo OX=3656 GN=LOC103489478 PE=4 SV=1	[more]
tr\|A0A0A0KTM6\|A0A0A0KTM6_CUCSA	1.8e-150	92.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623480 PE=4 SV=1	[more]
tr\|A0A2P5CPV5\|A0A2P5CPV5_9ROSA	2.2e-140	86.96	Tetraspanin/Peripherin OS=Trema orientalis OX=63057 GN=TorRG33x02_277380 PE=4 SV...	[more]
tr\|A0A2P5CBX0\|A0A2P5CBX0_PARAD	1.4e-139	86.23	Tetraspanin/Peripherin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_165870 PE=...	[more]
tr\|A0A067E3K6\|A0A067E3K6_CITSI	5.0e-137	84.36	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g023538mg PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR018499	Tetraspanin/Peripherin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01965-RA	Carg01965-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspannin	coord: 6..245 e-value: 2.9E-29 score: 102.3
None	No IPR available	PANTHER	PTHR32191:SF40	TETRASPANIN-5	coord: 1..267
None	No IPR available	PANTHER	PTHR32191	FAMILY NOT NAMED	coord: 1..267

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01965	Cla020574	Watermelon (97103) v1	carwmB0842
Carg01965	Csa5G623480	Cucumber (Chinese Long) v2	carcuB0857
Carg01965	MELO3C012439	Melon (DHL92) v3.5.1	carmeB0834
Carg01965	ClCG05G020900	Watermelon (Charleston Gray)	carwcgB0816
Carg01965	CSPI05G27280	Wild cucumber (PI 183967)	carcpiB0877
Carg01965	Cucsa.308260	Cucumber (Gy14) v1	carcgyB0969
Carg01965	CmaCh04G013580	Cucurbita maxima (Rimu)	carcmaB1170
Carg01965	CmaCh04G025860	Cucurbita maxima (Rimu)	carcmaB1168
Carg01965	CmaCh15G004480	Cucurbita maxima (Rimu)	carcmaB1163
Carg01965	CmoCh15G004560	Cucurbita moschata (Rifu)	carcmoB1131
Carg01965	CmoCh04G014320	Cucurbita moschata (Rifu)	carcmoB1138
Carg01965	CmoCh04G027070	Cucurbita moschata (Rifu)	carcmoB1136
Carg01965	Lsi04G000580	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg01965	Cp4.1LG01g24330	Cucurbita pepo (Zucchini)	carcpeB1176
Carg01965	Cp4.1LG01g15010	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01965	Cp4.1LG13g09880	Cucurbita pepo (Zucchini)	carcpeB1174
Carg01965	CsGy5G026670	Cucumber (Gy14) v2	carcgybB0831
Carg01965	MELO3C012439.2	Melon (DHL92) v3.6.1	carmedB0846
Carg01965	CsaV3_5G036410	Cucumber (Chinese Long) v3	carcucB0881
Carg01965	Bhi07G000747	Wax gourd	carwgoB0979

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01965	Carg02398	Silver-seed gourd	carcarB309
Carg01965	Carg04548	Silver-seed gourd	carcarB578

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01965	Silver-seed gourd	carcarB472
Carg01965	Cucurbita maxima (Rimu)	carcmaB1167
Carg01965	Cucurbita moschata (Rifu)	carcmoB1135
Carg01965	Cucurbita pepo (Zucchini)	carcpeB1169
Carg01965	Watermelon (97103) v2	carwmbB0881
Carg01965	Watermelon (97103) v2	carwmbB0878