CmaCh04G013580 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G013580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Tetraspanin-31-A
Location	Cma_Chr04 : 6938204 .. 6940224 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGTTTCCTTAATGTGTAAGAAGCAAGCAGAGTTGAGTCCTTATCACATGCTGATTCAGACCAACGCCACTTTAAAAACACACACAACCAACCAAATTGCACAAAAGCGAACCCCAAAAGCTCCGATATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTCATGTTGTTTCTGATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTCACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTTCTTGGACTCCTCTTGATTATCTTGAACGAGATATGACACCAATTCAGGTGATCCTTTTATCTTTATTTTTTTAGTTTTACTTGATATTGTTCGTTTTAATTTATTGTCGTCAGCCTTATAATTTTAAAATGCGTATACTAGAGAGATTGTGGGATCTCACAATCCACTTCTTTGAGGGTCCAGCGTCCTCACTCGCACACCGTTCAATAACTGGCTCTAATATCAAATTTAGACACTAAACAATGTGCAAGAGAGAACACTGGGCCCTCAAGGGTGTAGGTTGTGAGACCCCGCATGAGTACGTTGAGCTCCTAAGAGGTGGATTGTGAGATTCCACGTCGGTTGGAGAGAAGAATGAAACATTTTTTATAAAGTGTGAAAATTTCTTACCAGTGGACGCATTCTAAAATCATGAGATTGGCAACGATACTTAACGAACCAAAGTGGACAATTTCTACCGTGGTGGGCTTGAGCTATTACACAATAATTCTTAAAAATTTTGTTAAAATGAATTAAATGGTAAAAATAATTTGTATACAAGAATATATATATATTTTGTAAATATGGTTAATAAATTTAGCTGAATTTAAAATATAATAACTAAAATTAGTATTTTTTAATTATACTAGACTTCGCTAATAACAATGCCGGGCTAGAATTATAATAAGAAATTGAGATGCATAATAATAATTTTTTTAAAAAAAGGAAATTTATGTCGACAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGCGGGGGCGGTGGTGGCTCAGGATCCGGACTGCTACCGGTGGAACAATGCCCCTAACTTGTTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGACTGGCATAAGCTCTCCGTCCTCAATGTCGTTGTTGTCGTCCTCCTCATCGGTGTTTACTCCATTGGCTGTTGTGCCTTCCGTAACACCAAGAGAGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTATTATTGGTACTTTTTCTAAATTGATATTTCTCAAAATAAATTTTAAAATAGGTTAAATAAATAAAATAAAATAAAAACCTTAAATTTTATACTTTAAATACAATTTTTAATTAATAAAATTACTTATACATATTAAAAAAATAATAATAATAAAAGAGGAATTAGATTCTTTAATAATTATATGGTTTCAATTTGATTGAGAGTAATTAAAAAGTTAAAGAAGAATTAGATTCTGTTAATTTATATAATATTTTTATATTAATTATTTAATTATTATTATTATTATTATTATTTTGGCAGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAAGATAGAAGAAATATTCGCCATTTCCAATGGTTTCTTCACTTTTTACTTTTTACTTTTTTTTTT

mRNA sequence

AGGGTTTCCTTAATGTGTAAGAAGCAAGCAGAGTTGAGTCCTTATCACATGCTGATTCAGACCAACGCCACTTTAAAAACACACACAACCAACCAAATTGCACAAAAGCGAACCCCAAAAGCTCCGATATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTCATGTTGTTTCTGATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTCACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTTCTTGGACTCCTCTTGATTATCTTGAACGAGATATGACACCAATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGCGGGGGCGGTGGTGGCTCAGGATCCGGACTGCTACCGGTGGAACAATGCCCCTAACTTGTTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGACTGGCATAAGCTCTCCGTCCTCAATGTCGTTGTTGTCGTCCTCCTCATCGGTGTTTACTCCATTGGCTGTTGTGCCTTCCGTAACACCAAGAGAGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTATTATTGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAAGATAGAAGAAATATTCGCCATTTCCAATGGTTTCTTCACTTTTTACTTTTTACTTTTTTTTTT

Coding sequence (CDS)

ATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTTACTTGGTGGTCATGTTGTTTCTGATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTCACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAAGCTTGCTTCTTGGACTCCTCTTGATTATCTTGAACGAGATATGACACCAATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGCGGGGGCGGTGGTGGCTCAGGATCCGGACTGCTACCGGTGGAACAATGCCCCTAACTTGTTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGACTGGCATAAGCTCTCCGTCCTCAATGTCGTTGTTGTCGTCCTCCTCATCGGTGTTTACTCCATTGGCTGTTGTGCCTTCCGTAACACCAAGAGAGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTATTATTGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAA

Protein sequence

MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

Homology

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BLAST of CmaCh04G013580 vs. Swiss-Prot
Match: TET6_ARATH (Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 5.9e-120
Identity = 203/287 (70.73%), Postives = 236/287 (82.23%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVM+FLIATLMGLT+FG VVT  GGGVE P GR+Y+EY L  Y  
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVP-GRIYKEYRLGDYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR+RV+DP YW +IRSC+L SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+  
Sbjct: 121 WLRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYE-- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               VV    DC+RWNN   +LCYECD+CKAGVLE++R DW KLSV+N++V+VLLI VY+
Sbjct: 181 --AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 240

Query: 241 IGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
            GCCAF NT+ A   Y P   NRMT+VRPRWDYYWWRW H+K+EQLY
Sbjct: 241 AGCCAFHNTRHAAHPYHPSDDNRMTRVRPRWDYYWWRWWHEKKEQLY 282

[Close]

BLAST of CmaCh04G013580 vs. Swiss-Prot
Match: TET5_ARATH (Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.5e-102
Identity = 171/282 (60.64%), Postives = 217/282 (76.95%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           +GAC +VAW LWVYL  M+F+I  LMGLT+FGF+VT   GGV    GRVY+E+ LE Y  
Sbjct: 61  VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGV-VVDGRVYKEFKLEAYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+  
Sbjct: 121 WLKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYN-- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               V+ QDPDCYRWNNA  +LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VY 
Sbjct: 181 -TDTVIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYC 240

Query: 241 IGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK 282
           +GCCAF+N KR +   +PYG   M+K RP W+  W RW H +
Sbjct: 241 VGCCAFKNAKRPQHYGFPYGRYGMSKSRPGWEQSWSRWWHGR 278

[Close]

BLAST of CmaCh04G013580 vs. Swiss-Prot
Match: TET4_ARATH (Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.4e-65
Identity = 124/278 (44.60%), Postives = 172/278 (61.87%), Query Frame = 1


Query: 3   RFSNTVIGFLNLFTLIASIPIIGGGLWMAR--SSTTCESFLQTPLLVVGFVVLVVSLAGF 62
           R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG 
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 122
            GAC+   + +W+YL  M F+IA L+G TIF +VVT  G G      R Y +Y+L  YSG
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRR-YLDYYLNDYSG 121

Query: 123 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTA 182
           WL+ RV D  YW  I SCV  S  C K+         T   +  R+++P++SGCCKPPT 
Sbjct: 122 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 181

Query: 183 CNYDMM------AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLN 242
           C Y  +        G +V  +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N
Sbjct: 182 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKV 267
           +VVV++L+  Y I C A++N KR   D P G  RMT +
Sbjct: 242 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278

[Close]

BLAST of CmaCh04G013580 vs. Swiss-Prot
Match: TET3_ARATH (Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-64
Identity = 124/280 (44.29%), Postives = 174/280 (62.14%), Query Frame = 1


Query: 3   RFSNTVIGFLNLFTLIASIPIIGGGLWMAR--SSTTCESFLQTPLLVVGFVVLVVSLAGF 62
           R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 122
            GAC+   + +W+YLVVML +IA L+G  IF + VT  G G      R Y +Y+LE YSG
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSG-RTVLNRGYLDYYLEDYSG 121

Query: 123 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTA 182
           WL+ RV D  YW  I SC+  S  C K+         T   +  R ++P++SGCCKPPT 
Sbjct: 122 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 181

Query: 183 CNYDMM------AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLN 242
           C +  +        G ++  + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+N
Sbjct: 182 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRP 269
           +VV+++L+  Y I   A+RN KR + D P G  RMTK  P
Sbjct: 242 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

[Close]

BLAST of CmaCh04G013580 vs. Swiss-Prot
Match: TET8_ARATH (Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 2.1e-61
Identity = 117/265 (44.15%), Postives = 172/265 (64.91%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAG 60
           M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  FIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYS 120
            IG+C  V W LWVYL VM  LI  +  +T+F FVVT  G G EA  G+ Y+EY L  YS
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAG-EAIEGKGYKEYKLGDYS 120

Query: 121 GWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTAC 180
            WL+KRV++ + W  IRSC++ SK C+KL +     P++ + +  +T +QSGCCKP   C
Sbjct: 121 TWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDEC 180

Query: 181 NYDMMAAGAVVAQ------DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNV 240
            ++ +              +PDC  W+NA   LC++C SCKAG+L++V+  W K++++N+
Sbjct: 181 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 240

Query: 241 VVVVLLIGVYSIGCCAFRNTKRAET 255
           V +V LI VYS+GCCAFRN KR ++
Sbjct: 241 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of CmaCh04G013580 vs. TrEMBL
Match: A0A0A0KTM6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623480 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 4.0e-160
Identity = 266/286 (93.01%), Postives = 281/286 (98.25%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVMLFLIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           AAGA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           +GCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDK+EQLY
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWWRWLHDKKEQLY 286

[Close]

BLAST of CmaCh04G013580 vs. TrEMBL
Match: B9HLM8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04120g PE=4 SV=2)

HSP 1 Score: 521.9 bits (1343), Expect = 4.8e-145
Identity = 246/286 (86.01%), Postives = 264/286 (92.31%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVMLFLIA LMGLTIFGFVVT  GGGVE PG RVY+EY +E YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLFLIAALMGLTIFGFVVTSQGGGVEVPG-RVYKEYRIEDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR ++KDP YW TIRSC+LGSKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+  
Sbjct: 121 WLRNKIKDPDYWRTIRSCILGSKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNTA 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
            A   VAQDPDCYRWNNAP LLCYECDSCKAGVLEDVRRDWHKLSVLNVV++V LIG+YS
Sbjct: 181 TA---VAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNVVMLVFLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           IGCCAF+NT+RAETDYPYG NRMTKVRPRWDYYWWRW  DKREQLY
Sbjct: 241 IGCCAFQNTRRAETDYPYGENRMTKVRPRWDYYWWRWWQDKREQLY 282

[Close]

BLAST of CmaCh04G013580 vs. TrEMBL
Match: B9HU49_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22710g PE=4 SV=2)

HSP 1 Score: 518.1 bits (1333), Expect = 6.9e-144
Identity = 245/286 (85.66%), Postives = 261/286 (91.26%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMARSSTTCE FLQTPLLVVGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCEGFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVML LIATLMGLTIFGFVVT  GGGVE PG RVY+EY LE YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLLLIATLMGLTIFGFVVTSQGGGVEVPG-RVYKEYRLEDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR R+KDP YW TIRSC+LGSKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+M 
Sbjct: 121 WLRNRIKDPDYWRTIRSCILGSKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNMA 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
            A   V QDPDCYRWNN P LLCYECDSCKAGVLEDVRRDW KLSVLN+V+VVLLIG+YS
Sbjct: 181 TA---VPQDPDCYRWNNVPTLLCYECDSCKAGVLEDVRRDWRKLSVLNIVMVVLLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
            GCCAF+NT+RAETDYPYG NRMTKVRPRWDYYWWRW  DKREQLY
Sbjct: 241 TGCCAFQNTRRAETDYPYGENRMTKVRPRWDYYWWRWWQDKREQLY 282

[Close]

BLAST of CmaCh04G013580 vs. TrEMBL
Match: M5X3C1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009675mg PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 2.6e-143
Identity = 236/286 (82.52%), Postives = 264/286 (92.31%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMARSSTTCE+FLQTPLLVVGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCETFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVML LIATLMGLT+FGFVVT  GGGV+ P  RVY+EYHLE YS 
Sbjct: 61  IGACFNVAWALWVYLVVMLLLIATLMGLTVFGFVVTSQGGGVDVPS-RVYKEYHLEDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WL+ R+KDP YW  IRSC+LGSKTCAKL +WTPLDYLERDM+PIQSGCCKPPT+CNY+M 
Sbjct: 121 WLKNRIKDPNYWTKIRSCILGSKTCAKLVAWTPLDYLERDMSPIQSGCCKPPTSCNYNM- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
                V+QDPDCYRWNNAPNLLCYECDSCKAGVLED++RDWHKLSVLN+V++++LIG+YS
Sbjct: 181 --ATTVSQDPDCYRWNNAPNLLCYECDSCKAGVLEDIKRDWHKLSVLNIVMLMVLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           IGCCAFRNT+RAETD+PYG NRM+KVRPRWDYYWWRW H ++EQLY
Sbjct: 241 IGCCAFRNTQRAETDHPYGQNRMSKVRPRWDYYWWRWWHHRKEQLY 282

[Close]

BLAST of CmaCh04G013580 vs. TrEMBL
Match: A0A067E3K6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023538mg PE=3 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 7.7e-143
Identity = 241/286 (84.27%), Postives = 263/286 (91.96%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIG GLWMARSSTTCESFLQTPLLV+GFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGAGLWMARSSTTCESFLQTPLLVIGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVMLFLIATLM LTIFGFVVT  GGGV+ PG RVY+EYHL+ YS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMALTIFGFVVTSRGGGVQVPG-RVYKEYHLQDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR RVKDP YW TIRSC+LGSKTCAKLA WTPLDYLERDMTPIQSGCCKPPT+CNY+M 
Sbjct: 121 WLRNRVKDPNYWSTIRSCLLGSKTCAKLALWTPLDYLERDMTPIQSGCCKPPTSCNYNM- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
                +AQDPDCYRWNNAP LLCYECDSCKAGVLEDVRRDWHKLSVLN+V++V+LIG+YS
Sbjct: 181 ---PTMAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVVLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           IGCCAF+NT+RA+TDYPYG N+MTKVRPRWDYYWWRW  D RE+L+
Sbjct: 241 IGCCAFQNTRRAQTDYPYGENQMTKVRPRWDYYWWRWWKDTRERLW 281

[Close]

BLAST of CmaCh04G013580 vs. TAIR10
Match: AT3G12090.1 (AT3G12090.1 tetraspanin6)

HSP 1 Score: 431.8 bits (1109), Expect = 3.3e-121
Identity = 203/287 (70.73%), Postives = 236/287 (82.23%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGF
Sbjct: 1   MYRFSNTVIGVLNLLTLLASIPIIGTALYKARSSTTCENFLQTPLLVIGFIILIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVM+FLIATLMGLT+FG VVT  GGGVE P GR+Y+EY L  Y  
Sbjct: 61  IGACFNVAWALWVYLVVMIFLIATLMGLTLFGLVVTSQGGGVEVP-GRIYKEYRLGDYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR+RV+DP YW +IRSC+L SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+  
Sbjct: 121 WLRERVRDPEYWNSIRSCILSSKTCTKIESWTTLDYFQRDMTSVQSGCCKPPTACTYE-- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               VV    DC+RWNN   +LCYECD+CKAGVLE++R DW KLSV+N++V+VLLI VY+
Sbjct: 181 --AGVVDGGGDCFRWNNGVEMLCYECDACKAGVLEEIRLDWRKLSVVNILVLVLLIAVYA 240

Query: 241 IGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
            GCCAF NT+ A   Y P   NRMT+VRPRWDYYWWRW H+K+EQLY
Sbjct: 241 AGCCAFHNTRHAAHPYHPSDDNRMTRVRPRWDYYWWRWWHEKKEQLY 282

[Close]

BLAST of CmaCh04G013580 vs. TAIR10
Match: AT4G23410.1 (AT4G23410.1 tetraspanin5)

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-103
Identity = 171/282 (60.64%), Postives = 217/282 (76.95%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG 
Sbjct: 1   MNRMSNTVIGFLNILTLISSIVLLGSALWMGRSKTTCEHFLQKPLLILGLAILILSVAGL 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           +GAC +VAW LWVYL  M+F+I  LMGLT+FGF+VT   GGV    GRVY+E+ LE Y  
Sbjct: 61  VGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFIVTSHSGGV-VVDGRVYKEFKLEAYHP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+  
Sbjct: 121 WLKTRVVDTNYWVTIKTCLLGSVTCSKLALWTPLDYLQKDLSPLQSGCCKPPTSCVYN-- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               V+ QDPDCYRWNNA  +LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VY 
Sbjct: 181 -TDTVIQQDPDCYRWNNAATVLCYDCDTCRAGVLETVRRDWHKLSLVNVIVVIFLIAVYC 240

Query: 241 IGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK 282
           +GCCAF+N KR +   +PYG   M+K RP W+  W RW H +
Sbjct: 241 VGCCAFKNAKRPQHYGFPYGRYGMSKSRPGWEQSWSRWWHGR 278

[Close]

BLAST of CmaCh04G013580 vs. TAIR10
Match: AT5G60220.1 (AT5G60220.1 tetraspanin4)

HSP 1 Score: 249.2 bits (635), Expect = 3.0e-66
Identity = 124/278 (44.60%), Postives = 172/278 (61.87%), Query Frame = 1


Query: 3   RFSNTVIGFLNLFTLIASIPIIGGGLWMAR--SSTTCESFLQTPLLVVGFVVLVVSLAGF 62
           R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG 
Sbjct: 2   RSRSNLIGLINFFTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIIIGISIMVISLAGI 61

Query: 63  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 122
            GAC+   + +W+YL  M F+IA L+G TIF +VVT  G G      R Y +Y+L  YSG
Sbjct: 62  AGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVTDKGSGRFVMNRR-YLDYYLNDYSG 121

Query: 123 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTA 182
           WL+ RV D  YW  I SCV  S  C K+         T   +  R+++P++SGCCKPPT 
Sbjct: 122 WLKDRVTDNGYWRDIGSCVRDSGVCKKIGRDLNGVPETAHMFYFRNLSPVESGCCKPPTD 181

Query: 183 CNYDMM------AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLN 242
           C Y  +        G +V  +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N
Sbjct: 182 CGYTYVNETVWIPGGEMVGPNPDCMLWNNDQRLLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKV 267
           +VVV++L+  Y I C A++N KR   D P G  RMT +
Sbjct: 242 IVVVIILVIFYVIACAAYQNVKRMYNDEPVGEARMTNL 278

[Close]

BLAST of CmaCh04G013580 vs. TAIR10
Match: AT3G45600.1 (AT3G45600.1 tetraspanin3)

HSP 1 Score: 247.3 bits (630), Expect = 1.2e-65
Identity = 124/280 (44.29%), Postives = 174/280 (62.14%), Query Frame = 1


Query: 3   RFSNTVIGFLNLFTLIASIPIIGGGLWMAR--SSTTCESFLQTPLLVVGFVVLVVSLAGF 62
           R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF
Sbjct: 2   RTSNHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGF 61

Query: 63  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 122
            GAC+   + +W+YLVVML +IA L+G  IF + VT  G G      R Y +Y+LE YSG
Sbjct: 62  AGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVTDKGSG-RTVLNRGYLDYYLEDYSG 121

Query: 123 WLRKRVKDPRYWVTIRSCVLGSKTCAKLAS------WTPLDYLERDMTPIQSGCCKPPTA 182
           WL+ RV D  YW  I SC+  S  C K+         T   +  R ++P++SGCCKPPT 
Sbjct: 122 WLKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADMFFLRRLSPVESGCCKPPTD 181

Query: 183 CNYDMM------AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLN 242
           C +  +        G ++  + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+N
Sbjct: 182 CGFSYVNETGWDTRGGMIGPNQDCMVWSNDQSMLCYQCSSCKAGVLGSLKKSWRKVSVIN 241

Query: 243 VVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRP 269
           +VV+++L+  Y I   A+RN KR + D P G  RMTK  P
Sbjct: 242 IVVLIILVIFYVIAYAAYRNVKRIDNDEPAGEARMTKSHP 280

[Close]

BLAST of CmaCh04G013580 vs. TAIR10
Match: AT2G23810.1 (AT2G23810.1 tetraspanin8)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-62
Identity = 117/265 (44.15%), Postives = 172/265 (64.91%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAG 60
           M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG
Sbjct: 1   MARCSNNLVGILNFLVFLLSIPILAGGIWLSQKGSTECERFLDKPVIALGVFLMVVAIAG 60

Query: 61  FIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYS 120
            IG+C  V W LWVYL VM  LI  +  +T+F FVVT  G G EA  G+ Y+EY L  YS
Sbjct: 61  LIGSCCRVTWLLWVYLFVMFLLILLVFCITVFAFVVTNKGAG-EAIEGKGYKEYKLGDYS 120

Query: 121 GWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTAC 180
            WL+KRV++ + W  IRSC++ SK C+KL +     P++ + +  +T +QSGCCKP   C
Sbjct: 121 TWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFVNVPVNSFYKEHLTALQSGCCKPSDEC 180

Query: 181 NYDMMAAGAVVAQ------DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNV 240
            ++ +              +PDC  W+NA   LC++C SCKAG+L++V+  W K++++N+
Sbjct: 181 GFEYVNPTTWTKNTTGTHTNPDCQTWDNAKEKLCFDCQSCKAGLLDNVKSAWKKVAIVNI 240

Query: 241 VVVVLLIGVYSIGCCAFRNTKRAET 255
           V +V LI VYS+GCCAFRN KR ++
Sbjct: 241 VFLVFLIIVYSVGCCAFRNNKRDDS 264

[Close]

BLAST of CmaCh04G013580 vs. NCBI nr
Match: gi|659092104|ref|XP_008446901.1| (PREDICTED: tetraspanin-6 [Cucumis melo])

HSP 1 Score: 573.2 bits (1476), Expect = 2.6e-160
Identity = 267/286 (93.36%), Postives = 281/286 (98.25%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVMLFLIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           AAGA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           +GCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDKREQLY
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWWRWLHDKREQLY 286

[Close]

BLAST of CmaCh04G013580 vs. NCBI nr
Match: gi|449449342|ref|XP_004142424.1| (PREDICTED: tetraspanin-6 [Cucumis sativus])

HSP 1 Score: 572.0 bits (1473), Expect = 5.8e-160
Identity = 266/286 (93.01%), Postives = 281/286 (98.25%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF
Sbjct: 1   MYRFSNTLIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACFNVAWALWVYLVVMLFLIATLMGLTIFGF+VT  GGGVEAPGGRVYREYHLEQYS 
Sbjct: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFIVTAAGGGVEAPGGRVYREYHLEQYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMM
Sbjct: 121 WLRKRIKDPRYWLTIRSCLLGSKTCAQLASWTPLDYLQRDMSPIQSGCCKPPTACNYDMM 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
           AAGA+V+QDPDCYRWNNAP LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY 
Sbjct: 181 AAGAMVSQDPDCYRWNNAPTLLCYECDSCKAGVLENVRRDWHKLSVLNVVVVILLIGVYC 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           +GCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDK+EQLY
Sbjct: 241 VGCCAFRNTKRAETDYPYGHNQMTKVRPRWDYYWWRWLHDKKEQLY 286

[Close]

BLAST of CmaCh04G013580 vs. NCBI nr
Match: gi|1000937104|ref|XP_002534549.2| (PREDICTED: tetraspanin-6 [Ricinus communis])

HSP 1 Score: 525.0 bits (1351), Expect = 8.1e-146
Identity = 246/286 (86.01%), Postives = 267/286 (93.36%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMA+SSTTCESFLQTPLLVVGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVMLFLIATLMGLTIFGFVVT  GGGV+ PG RVY+EY LE YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLFLIATLMGLTIFGFVVTSQGGGVDVPG-RVYKEYRLEDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR RVKDP YW TIRSC+LGS+TCAKLASWTPLDY+E+DM+ IQSGCCKPPT+CNY+M 
Sbjct: 121 WLRDRVKDPDYWRTIRSCILGSRTCAKLASWTPLDYMEKDMSHIQSGCCKPPTSCNYNM- 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
               +V QDPDCYRWNN+P LLCYECDSCKAGVLEDVRRDWHKLSVLN+V++VLLIG+YS
Sbjct: 181 --ATLVPQDPDCYRWNNSPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMLVLLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           IGCCAFRNT+RAETDYPYG NRMTKVRPRWDYYWWRWLHDKREQLY
Sbjct: 241 IGCCAFRNTRRAETDYPYGENRMTKVRPRWDYYWWRWLHDKREQLY 282

[Close]

BLAST of CmaCh04G013580 vs. NCBI nr
Match: gi|743895394|ref|XP_011040964.1| (PREDICTED: tetraspanin-6-like [Populus euphratica])

HSP 1 Score: 521.9 bits (1343), Expect = 6.9e-145
Identity = 247/286 (86.36%), Postives = 263/286 (91.96%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMA+SSTTCE FLQTPLLVVGFVVL+VSLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMAKSSTTCEGFLQTPLLVVGFVVLIVSLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVML LIATLMGLTIFGFVVT  GGGVE PG RVY+EY LE YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLLLIATLMGLTIFGFVVTSQGGGVEVPG-RVYKEYRLEDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR R+KDP YW TIRSC+LGSKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+M 
Sbjct: 121 WLRNRIKDPDYWRTIRSCILGSKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNMA 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
            A   V QDPDCYRWNNAP LLCYECDSCKAGVLEDVRRDWHKLSVLN+V+VVLLIG+YS
Sbjct: 181 TA---VPQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNIVMVVLLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
            GCCAF+NT+RAETDYPYG NRMTKVRPRWDYYWWRW  DKREQLY
Sbjct: 241 TGCCAFQNTRRAETDYPYGENRMTKVRPRWDYYWWRWWQDKREQLY 282

[Close]

BLAST of CmaCh04G013580 vs. NCBI nr
Match: gi|566182278|ref|XP_002312022.2| (hypothetical protein POPTR_0008s04120g [Populus trichocarpa])

HSP 1 Score: 521.9 bits (1343), Expect = 6.9e-145
Identity = 246/286 (86.01%), Postives = 264/286 (92.31%), Query Frame = 1


Query: 1   MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGF 60
           MYRFSNTVIGFLNLFTL+ASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVL++SLAGF
Sbjct: 1   MYRFSNTVIGFLNLFTLLASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLIISLAGF 60

Query: 61  IGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVYREYHLEQYSG 120
           IGACF+VAWALWVYLVVMLFLIA LMGLTIFGFVVT  GGGVE PG RVY+EY +E YS 
Sbjct: 61  IGACFHVAWALWVYLVVMLFLIAALMGLTIFGFVVTSQGGGVEVPG-RVYKEYRIEDYSP 120

Query: 121 WLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM 180
           WLR ++KDP YW TIRSC+LGSKTCAKLASWTPLDYLE+DM+PIQSGCCKPPT+CNY+  
Sbjct: 121 WLRNKIKDPDYWRTIRSCILGSKTCAKLASWTPLDYLEKDMSPIQSGCCKPPTSCNYNTA 180

Query: 181 AAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS 240
            A   VAQDPDCYRWNNAP LLCYECDSCKAGVLEDVRRDWHKLSVLNVV++V LIG+YS
Sbjct: 181 TA---VAQDPDCYRWNNAPTLLCYECDSCKAGVLEDVRRDWHKLSVLNVVMLVFLIGIYS 240

Query: 241 IGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY 287
           IGCCAF+NT+RAETDYPYG NRMTKVRPRWDYYWWRW  DKREQLY
Sbjct: 241 IGCCAFQNTRRAETDYPYGENRMTKVRPRWDYYWWRWWQDKREQLY 282

The following BLAST results are available for this feature:

BLAST of CmaCh04G013580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TET6_ARATH	5.9e-120	70.73	Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1	[more]
TET5_ARATH	2.5e-102	60.64	Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1	[more]
TET4_ARATH	5.4e-65	44.60	Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1	[more]
TET3_ARATH	2.0e-64	44.29	Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1	[more]
TET8_ARATH	2.1e-61	44.15	Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1	[more]

BLAST of CmaCh04G013580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTM6_CUCSA	4.0e-160	93.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G623480 PE=4 SV=1	[more]
B9HLM8_POPTR	4.8e-145	86.01	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04120g PE=4 SV=2	[more]
B9HU49_POPTR	6.9e-144	85.66	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22710g PE=4 SV=2	[more]
M5X3C1_PRUPE	2.6e-143	82.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009675mg PE=4 SV=1	[more]
A0A067E3K6_CITSI	7.7e-143	84.27	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023538mg PE=3 SV=1	[more]

BLAST of CmaCh04G013580 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G12090.1	3.3e-121	70.73	tetraspanin6	[more]
AT4G23410.1	1.4e-103	60.64	tetraspanin5	[more]
AT5G60220.1	3.0e-66	44.60	tetraspanin4	[more]
AT3G45600.1	1.2e-65	44.29	tetraspanin3	[more]
AT2G23810.1	1.2e-62	44.15	tetraspanin8	[more]

BLAST of CmaCh04G013580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092104\|ref\|XP_008446901.1\|	2.6e-160	93.36	PREDICTED: tetraspanin-6 [Cucumis melo]	[more]
gi\|449449342\|ref\|XP_004142424.1\|	5.8e-160	93.01	PREDICTED: tetraspanin-6 [Cucumis sativus]	[more]
gi\|1000937104\|ref\|XP_002534549.2\|	8.1e-146	86.01	PREDICTED: tetraspanin-6 [Ricinus communis]	[more]
gi\|743895394\|ref\|XP_011040964.1\|	6.9e-145	86.36	PREDICTED: tetraspanin-6-like [Populus euphratica]	[more]
gi\|566182278\|ref\|XP_002312022.2\|	6.9e-145	86.01	hypothetical protein POPTR_0008s04120g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018499	Tetraspanin/Peripherin

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G013580.1	CmaCh04G013580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018499	Tetraspanin/Peripherin	PFAM	PF00335	Tetraspannin	coord: 6..245 score: 1.4
None	No IPR available	PANTHER	PTHR32191	FAMILY NOT NAMED	coord: 2..265 score: 8.2E
None	No IPR available	PANTHER	PTHR32191:SF1	TETRASPANIN-5-RELATED	coord: 2..265 score: 8.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G013580	Cucsa.308260	Cucumber (Gy14) v1	cgycmaB0850
CmaCh04G013580	Cla020574	Watermelon (97103) v1	cmawmB699
CmaCh04G013580	Csa5G623480	Cucumber (Chinese Long) v2	cmacuB748
CmaCh04G013580	MELO3C012439	Melon (DHL92) v3.5.1	cmameB640
CmaCh04G013580	ClCG05G020900	Watermelon (Charleston Gray)	cmawcgB655
CmaCh04G013580	CSPI05G27280	Wild cucumber (PI 183967)	cmacpiB755
CmaCh04G013580	CmoCh04G014320	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G013580	CmoCh04G027070	Cucurbita moschata (Rifu)	cmacmoB740
CmaCh04G013580	CmoCh15G004560	Cucurbita moschata (Rifu)	cmacmoB691
CmaCh04G013580	Lsi04G000580	Bottle gourd (USVL1VR-Ls)	cmalsiB669
CmaCh04G013580	Cp4.1LG13g09880	Cucurbita pepo (Zucchini)	cmacpeB712
CmaCh04G013580	Cp4.1LG01g15010	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G013580	Cp4.1LG01g24330	Cucurbita pepo (Zucchini)	cmacpeB734
CmaCh04G013580	MELO3C012439.2	Melon (DHL92) v3.6.1	cmamedB726
CmaCh04G013580	CsaV3_5G036410	Cucumber (Chinese Long) v3	cmacucB0885
CmaCh04G013580	Bhi07G000747	Wax gourd	cmawgoB0903
CmaCh04G013580	CsGy5G026670	Cucumber (Gy14) v2	cgybcmaB672
CmaCh04G013580	Carg04548	Silver-seed gourd	carcmaB0966
CmaCh04G013580	Carg02398	Silver-seed gourd	carcmaB0370
CmaCh04G013580	Carg01965	Silver-seed gourd	carcmaB1170

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G013580	CmaCh15G004480	Cucurbita maxima (Rimu)	cmacmaB321
CmaCh04G013580	CmaCh04G025860	Cucurbita maxima (Rimu)	cmacmaB536

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G013580	Silver-seed gourd	carcmaB0673
CmaCh04G013580	Watermelon (97103) v2	cmawmbB758
CmaCh04G013580	Watermelon (97103) v2	cmawmbB787
CmaCh04G013580	Cucurbita maxima (Rimu)	cmacmaB402
CmaCh04G013580	Cucurbita moschata (Rifu)	cmacmoB706
CmaCh04G013580	Cucurbita pepo (Zucchini)	cmacpeB700