Lsi03G012980 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G012980
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionNDH-dependent cyclic electron flow 1
Locationchr03 : 23783289 .. 23785208 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTGGAAGTAAGGATGTGTTCAAGTGTTTGTGGAAGCCATTAATGCCTTCTTCTCTTTATCCCAATCTCCCATGGCTTCTCTGGTTTGCCTTCCTCTCCCAAAGCCAAACATCATTAGGGCTTCTTCTTCTTCTTCTTCTTCTGCTTCTGCGGCAACTTCCGCTTCCACCGCCGATTCCCTCAACGACAAATTTGGCCGCAAGGGCATCCACTTCCACGACTCCAATGGCATTCCCACCCTCGACCTCACCGTCCGCAACGGCAGCTCCTTACGCCTCAACATTTCCGATGCCCATCTCACTTCCTATAAACCCAAAGTCTATTGGAAGGACGACGGCTTCGAGGAAGTTCTCTTTACCACTCCCACCGCAAAAGGAGGGATTGCTCTTGTGATTGACGATGCTTCCGATTCTCCTTCCAAAACTTCTCTTCTTCCTTCTTCCGATTGGACTGTCAAAGATGTCGATTCCGACGCCATTGATGCTCTCCAGGTATAATTTTATTTATATCTTGATTTTGCTTCTTTACAGGGGTCTAATGTTGAATGAATTTCATAATATATCTTGTTTTATCTCAAAGTTCTGTTGTGGGACTGCTGGAGCAGAAGCTACATTAATGATATACGTTCGTATATATATATTGTATTGTTAACTTCTTATTGTGTTCTTCTCTTTAGTACCGAGTAATGAAGGGTTAGGAAAACCAAAAACCTCTCATCTTTTGTTTAGACACAGAACCGAGTTATGATAGTTGATTGCGTTTGTATGAGGACTTTTCAGTATTGAATCTCACACAATAACCTAATTGATTAGGAAAAAAAAATTAAAATTAATAGGGCCCAACCGGGTTCGAACCGGTGACCTCTTGATCTGCAGTCAAATGCTCTACCACTGAGCTATGAACCCTTGTTGGAAAACTTGCAACTAATCATATATTAATACAGTTATTCTTCTTGGTTTTGTTGCAGGTTGAGTTAAGCTGCAGTAGTAAGCAAATGGAGATTACTTACATTGTCACTCTCTATTCAGAAAGTATGGCGACGGCTGTGATTGTGAAGAACACAGGACTGAAGCCATTGACGCTAAAGAGCGCGATTTTGAGTCATTTTAAGTTCAAACGACGAGATGGGGCAGCAATTCAGGGGCTTCAGGGATGCTCCTATTGCTCTCACCCACCTCTATCTTCTCCTTTTGAAATACTATCTCCATTCGAAGCAATGAAGGCCGAGGAACCCGATTGGTTCTCGTTTGGCTCCGAGCCTCAAGGAAAAGCAGGCTCATGGAGCCTCCAAGATGTGCCATTCACCATGTTGAAGAACAAGTTCAGTAGAGTTTATGCTGCCCCACCAGCAGAGAGATTGAAGCCTGTATATCACACCACACCTTCAAAGTACGAGACTCTTGATCAGGTAAAGAGAAATGGCTTTCCGTTGTATCACACAACACCTTCAAGTTTAGTATTGAGGCTATGCTTGAAAATGTGCCTTTGTATCATGACTAGAAAAACACTTTCCATGAAGTAACATAAAAGTGCCTTGTGAAAAAGCAGATCTAGAGACTTTTTTTTGCTCAATTGTTTGTTTTAGCCCAAATATTTGATCGGAGAGCACATTAAAAACACTTTTAAGAGTGTAAAACCAAATATGAATTATAGAAGTGATCTGTTAATGAACATATTTTTACTTGAGTGCTTATAATTGAAGTTGTTGGGTCATTGTTATTTCAGGGGAGAGAGCTATTCTTCAGGGTGATAAGGATGGGGTTCGAAGACATATACATATCAAGCCCTGGTTCATTATCTAGCAAGTTTGGGGAAGACTATTTCATCTGCACTGGCCCTGCTTCCATGTTGGTTCCTGTCACAGTCAAACCTGGTGAACAATGGAGGGGCGCCCAAGTAATTGAGCATGATAACTTGTAA

mRNA sequence

GGTGGAAGTAAGGATGTGTTCAAGTGTTTGTGGAAGCCATTAATGCCTTCTTCTCTTTATCCCAATCTCCCATGGCTTCTCTGGTTTGCCTTCCTCTCCCAAAGCCAAACATCATTAGGGCTTCTTCTTCTTCTTCTTCTTCTGCTTCTGCGGCAACTTCCGCTTCCACCGCCGATTCCCTCAACGACAAATTTGGCCGCAAGGGCATCCACTTCCACGACTCCAATGGCATTCCCACCCTCGACCTCACCGTCCGCAACGGCAGCTCCTTACGCCTCAACATTTCCGATGCCCATCTCACTTCCTATAAACCCAAAGTCTATTGGAAGGACGACGGCTTCGAGGAAGTTCTCTTTACCACTCCCACCGCAAAAGGAGGGATTGCTCTTGTGATTGACGATGCTTCCGATTCTCCTTCCAAAACTTCTCTTCTTCCTTCTTCCGATTGGACTGTCAAAGATGTCGATTCCGACGCCATTGATGCTCTCCAGGTTGAGTTAAGCTGCAGTAGTAAGCAAATGGAGATTACTTACATTGTCACTCTCTATTCAGAAAGTATGGCGACGGCTGTGATTGTGAAGAACACAGGACTGAAGCCATTGACGCTAAAGAGCGCGATTTTGAGTCATTTTAAGTTCAAACGACGAGATGGGGCAGCAATTCAGGGGCTTCAGGGATGCTCCTATTGCTCTCACCCACCTCTATCTTCTCCTTTTGAAATACTATCTCCATTCGAAGCAATGAAGGCCGAGGAACCCGATTGGTTCTCGTTTGGCTCCGAGCCTCAAGGAAAAGCAGGCTCATGGAGCCTCCAAGATGTGCCATTCACCATGTTGAAGAACAAGTTCAGTAGAGTTTATGCTGCCCCACCAGCAGAGAGATTGAAGCCTGTATATCACACCACACCTTCAAAGTACGAGACTCTTGATCAGGTAAAGAGAAATGGCTTTCCGTTGGTGATAAGGATGGGGTTCGAAGACATATACATATCAAGCCCTGGTTCATTATCTAGCAAGTTTGGGGAAGACTATTTCATCTGCACTGGCCCTGCTTCCATGTTGGTTCCTGTCACAGTCAAACCTGGTGAACAATGGAGGGGCGCCCAAGTAATTGAGCATGATAACTTGTAA

Coding sequence (CDS)

ATGGCTTCTCTGGTTTGCCTTCCTCTCCCAAAGCCAAACATCATTAGGGCTTCTTCTTCTTCTTCTTCTTCTGCTTCTGCGGCAACTTCCGCTTCCACCGCCGATTCCCTCAACGACAAATTTGGCCGCAAGGGCATCCACTTCCACGACTCCAATGGCATTCCCACCCTCGACCTCACCGTCCGCAACGGCAGCTCCTTACGCCTCAACATTTCCGATGCCCATCTCACTTCCTATAAACCCAAAGTCTATTGGAAGGACGACGGCTTCGAGGAAGTTCTCTTTACCACTCCCACCGCAAAAGGAGGGATTGCTCTTGTGATTGACGATGCTTCCGATTCTCCTTCCAAAACTTCTCTTCTTCCTTCTTCCGATTGGACTGTCAAAGATGTCGATTCCGACGCCATTGATGCTCTCCAGGTTGAGTTAAGCTGCAGTAGTAAGCAAATGGAGATTACTTACATTGTCACTCTCTATTCAGAAAGTATGGCGACGGCTGTGATTGTGAAGAACACAGGACTGAAGCCATTGACGCTAAAGAGCGCGATTTTGAGTCATTTTAAGTTCAAACGACGAGATGGGGCAGCAATTCAGGGGCTTCAGGGATGCTCCTATTGCTCTCACCCACCTCTATCTTCTCCTTTTGAAATACTATCTCCATTCGAAGCAATGAAGGCCGAGGAACCCGATTGGTTCTCGTTTGGCTCCGAGCCTCAAGGAAAAGCAGGCTCATGGAGCCTCCAAGATGTGCCATTCACCATGTTGAAGAACAAGTTCAGTAGAGTTTATGCTGCCCCACCAGCAGAGAGATTGAAGCCTGTATATCACACCACACCTTCAAAGTACGAGACTCTTGATCAGGTAAAGAGAAATGGCTTTCCGTTGGTGATAAGGATGGGGTTCGAAGACATATACATATCAAGCCCTGGTTCATTATCTAGCAAGTTTGGGGAAGACTATTTCATCTGCACTGGCCCTGCTTCCATGTTGGTTCCTGTCACAGTCAAACCTGGTGAACAATGGAGGGGCGCCCAAGTAATTGAGCATGATAACTTGTAA

Protein sequence

MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLTVRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDSPSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFGSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFPLVIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL
Homology
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BLAST of Lsi03G012980 vs. Swiss-Prot
Match: PNSB2_ARATH (Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thaliana GN=PNSB2 PE=2 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 1.2e-111
Identity = 206/356 (57.87%), Postives = 266/356 (74.72%), Query Frame = 1 

Query: 1   MASLVCLPL-PKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDL 60
           MASL+   L PKP  +R+S S+  + +  T     + L DKFGRKGI F +SN IP ++L
Sbjct: 1   MASLISFSLLPKPKAVRSSISAPQTQTINT-----EKLEDKFGRKGIKFSESNNIPMVEL 60

Query: 61  TVRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP--TAKGGIALVIDDASDSPSK 120
            VRNGSSL+L++SDAH+ SYKPKVYWKD+GFEEVL+T     ++GG+ +VI +  +    
Sbjct: 61  KVRNGSSLKLSLSDAHVLSYKPKVYWKDEGFEEVLYTVDGDESRGGVGVVIVNGEEPKGG 120

Query: 121 TSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLKPL 180
           +S++   DW+VKD DSDAIDALQ+ELSC++  ++ITYIV+LY  SMATA++VKN G KP+
Sbjct: 121 SSVISGCDWSVKDTDSDAIDALQIELSCTAGVLDITYIVSLYPVSMATALVVKNNGRKPV 180

Query: 181 TLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFGSE 240
           TLK  I+S+ +FK+R GA IQGL+GCSYC +PPLSSPFE+LSP EAMKAE   WF  GSE
Sbjct: 181 TLKPGIMSYLRFKKRSGAGIQGLKGCSYCPNPPLSSPFELLSPSEAMKAESSGWF--GSE 240

Query: 241 PQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFPLVI 300
              K G W+++D   T+L+ K SR+Y APPAERLK VY+T PSK+ET+DQ  R  F  +I
Sbjct: 241 EGEKPGIWAVEDSVITLLEKKMSRIYGAPPAERLKAVYNTPPSKFETIDQ-GRGLFFRMI 300

Query: 301 RMGFEDIYISSPGSLSSKFG-EDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
           R+GFE++Y+ SPGS+  K+G + YF+CTGP SMLVPV V  GE WRGA VIEHDNL
Sbjct: 301 RIGFEEMYVGSPGSMWDKYGKQHYFVCTGPTSMLVPVDVASGETWRGAMVIEHDNL 348

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BLAST of Lsi03G012980 vs. Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 26/77 (33.77%), Postives = 41/77 (53.25%), Query Frame = 1 

Query: 274 VYHTTPSKYETLDQVKRNGFPLVIRMGFEDIYISSPGSLSSKFGEDY-------FICTGP 333
           VY   PSK   +D  K+  F +V + G  D  + +P    +K  +D+        +C  P
Sbjct: 230 VYLAAPSKIAIIDHEKKKTF-VVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEP 289

Query: 334 ASMLVPVTVKPGEQWRG 344
           A++  P+T+KPGE+WRG
Sbjct: 290 AAVEKPITLKPGEEWRG 305

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BLAST of Lsi03G012980 vs. TrEMBL
Match: A0A0A0LCL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843790 PE=4 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 2.5e-180
Identity = 324/352 (92.05%), Postives = 333/352 (94.60%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASLVCLPLPKPN+IRASSSSSSS S     ST DSLNDKFGRKG HFHDSNG+PTLDLT
Sbjct: 1   MASLVCLPLPKPNLIRASSSSSSSTSFP---STVDSLNDKFGRKGFHFHDSNGVPTLDLT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDSPSKTSL 120
           VRNGSSLRL ISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDS SK+SL
Sbjct: 61  VRNGSSLRLRISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDSSSKSSL 120

Query: 121 LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLKPLTLK 180
           LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSES+ATAVIVKNTGLKPLTLK
Sbjct: 121 LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESLATAVIVKNTGLKPLTLK 180

Query: 181 SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFGSEPQG 240
           SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSP EAMK EE DWFSFGSEPQG
Sbjct: 181 SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKVEESDWFSFGSEPQG 240

Query: 241 KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFPLVIRMG 300
           KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKP+YHTTPSKYETLDQ  R  F  VIRMG
Sbjct: 241 KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQ-GRELFFRVIRMG 300

Query: 301 FEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
           FEDIY+SSPGSLS+KFG+D+FICTGPASMLVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 FEDIYVSSPGSLSNKFGKDHFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 348

[Close]
BLAST of Lsi03G012980 vs. TrEMBL
Match: B9SHG7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1121740 PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 2.3e-133
Identity = 248/358 (69.27%), Postives = 287/358 (80.17%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASL+ L LPKP II+A+SS++++    T+  + D L +KFGRKGI F +SN IP  +LT
Sbjct: 1   MASLLSLSLPKPTIIKATSSTTTT----TTLPSPDVLEEKFGRKGIKFLESNNIPIAELT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP------TAKGGIALVIDDASDS 120
           VRNGSSLRL I DAH+TSYKPKVYWKDDGF E+L+T P       A+GGI LVI+DASDS
Sbjct: 61  VRNGSSLRLQIPDAHVTSYKPKVYWKDDGFHEILYTVPGKDSSSKARGGIGLVINDASDS 120

Query: 121 PSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGL 180
            SK SL+ +S+WTVKDVDSDAIDALQVEL C+S  ++I+YIV+LY ESMATAVIVKN G 
Sbjct: 121 GSKGSLITNSEWTVKDVDSDAIDALQVELGCTSGTLDISYIVSLYPESMATAVIVKNNGR 180

Query: 181 KPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSF 240
           KP+TL SAILSH KFKRR  AA+QG +GCSY  HPPLSSPFEILSP EAMK+E P  F F
Sbjct: 181 KPVTLTSAILSHLKFKRRQKAAVQGFRGCSYLPHPPLSSPFEILSPGEAMKSESPGLFDF 240

Query: 241 GSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFP 300
            SEP+ K G W +QDVPFT+LKNKFSR+YAAPP ERLK  Y+T PSKYETLDQ     F 
Sbjct: 241 SSEPEDKLGIWGVQDVPFTILKNKFSRIYAAPPQERLKAFYNTPPSKYETLDQGLELFF- 300

Query: 301 LVIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
            VIRMGFED Y+ SPGSLS K+GE+YFICTGPA+M+VPV VKPGE WRGAQVIEHDNL
Sbjct: 301 RVIRMGFEDTYMGSPGSLSEKYGEEYFICTGPAAMIVPVIVKPGEDWRGAQVIEHDNL 353

[Close]
BLAST of Lsi03G012980 vs. TrEMBL
Match: A0A0F7GZM2_9ROSI (Photosynthetic NDH subcomplex B 2 OS=Hypseocharis bilobata GN=PnsB2 PE=2 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 3.4e-132
Identity = 245/357 (68.63%), Postives = 292/357 (81.79%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASL+   LPK NII+ASSSS+++   AT+ ST +SL DKFG+KGI F +SN  P ++LT
Sbjct: 1   MASLLPFSLPKLNIIKASSSSTTAT--ATTLSTPESLEDKFGKKGIKFLESNNTPFVELT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP-----TAKGGIALVIDDASDSP 120
           VRNGSSLRL I +AH+TSYKPKV+WKDDGFEE+L+T P      ++GGI LV++DAS+S 
Sbjct: 61  VRNGSSLRLQIPNAHVTSYKPKVFWKDDGFEEILYTVPGGGGADSRGGIGLVLNDASESG 120

Query: 121 SKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLK 180
           SK SLL  S+WTVKDVDSDAIDALQVELSC++  ++ITY++TLY  S+ATAVIVKNTG K
Sbjct: 121 SKGSLLSGSEWTVKDVDSDAIDALQVELSCTAGTLDITYVITLYPVSIATAVIVKNTGRK 180

Query: 181 PLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFG 240
            +TL SAILSH + K+R   AIQGLQ CSYC+HPPLSSPFEILSP EAMK E+P  F+F 
Sbjct: 181 AVTLTSAILSHLRSKKRAATAIQGLQSCSYCTHPPLSSPFEILSPAEAMKTEDPGLFAFF 240

Query: 241 SEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFPL 300
            EP+ K GSW+LQDVP T+LK+K SRVYAAPP ERLK VY+T PSKYET+DQ  R  F  
Sbjct: 241 YEPEKKPGSWTLQDVPITILKHKLSRVYAAPPKERLKDVYNTPPSKYETIDQ-GRKLFFR 300

Query: 301 VIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
           VIRMG+EDIY+SSPGS S K+G+DYFICTGPASMLVPV V PGE+WRGAQ+IEHDNL
Sbjct: 301 VIRMGYEDIYVSSPGSFSQKYGKDYFICTGPASMLVPVVVNPGEEWRGAQIIEHDNL 354

[Close]
BLAST of Lsi03G012980 vs. TrEMBL
Match: M5WSX3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007725mg PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 4.4e-132
Identity = 247/361 (68.42%), Postives = 290/361 (80.33%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASL+   +P   +IRASSS S SA    + S  ++L +KFGRKGI F +S+ IP ++L 
Sbjct: 1   MASLLSFSVPNSKMIRASSSQSVSAP---TVSVPENLTEKFGRKGIKFLESDNIPIVELR 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP---------TAKGGIALVIDDA 120
           VRNGSSLRL I +AH+TSYKPKVYWKDDGF+EVL+T P          AKGGI LV++D 
Sbjct: 61  VRNGSSLRLQIPNAHVTSYKPKVYWKDDGFQEVLYTIPGNGTDPNSTKAKGGIGLVLNDV 120

Query: 121 SDSPSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKN 180
           S++ SK SL+ +S+WTVKDVDSD+IDALQVELS +S  +EITY+V+LY  SMATAVIV+N
Sbjct: 121 SEAGSKGSLVSTSEWTVKDVDSDSIDALQVELSSTSGTLEITYVVSLYPVSMATAVIVRN 180

Query: 181 TGLKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDW 240
            G KP+TL +AILSHFKFKRR GAAIQGL+GC+Y + PPLSSPFEILSP EAMKA+ P W
Sbjct: 181 KGRKPVTLTNAILSHFKFKRRSGAAIQGLKGCAYTALPPLSSPFEILSPAEAMKADTPGW 240

Query: 241 FSFGSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRN 300
           F FGS+P+ K GSW+ QDVPFT+LKNK SRVYAAPP ERLKP+Y+T PSKYETLDQ  R 
Sbjct: 241 FDFGSQPEEKPGSWTHQDVPFTILKNKLSRVYAAPPKERLKPIYNTPPSKYETLDQ-GRE 300

Query: 301 GFPLVIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDN 353
            F  VIRMGFEDIY+SSPGS   K+GE+YFICTGPASMLVPV VKPGE WRGAQVIEHDN
Sbjct: 301 LFYRVIRMGFEDIYLSSPGSFYEKYGEEYFICTGPASMLVPVVVKPGEDWRGAQVIEHDN 357

[Close]
BLAST of Lsi03G012980 vs. TrEMBL
Match: A0A0F7GZL7_9ROSI (Photosynthetic NDH subcomplex B 2 OS=Francoa sonchifolia GN=PnsB2 PE=2 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 3.7e-131
Identity = 244/359 (67.97%), Postives = 288/359 (80.22%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MAS +   LPKPNII++ S+S S    A + S  + L DKFGRKGI F +SN IPT++LT
Sbjct: 1   MASFLPFSLPKPNIIKSLSASPS----APTISIPEILEDKFGRKGIKFLESNNIPTVELT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTPTA-------KGGIALVIDDASD 120
           VRNGSSL+L I +AH+TSYKPKVYWKDDGFEEVL+T P A       KGGI LVI+DAS+
Sbjct: 61  VRNGSSLKLQIPNAHVTSYKPKVYWKDDGFEEVLYTLPNARTDSTIAKGGIGLVINDASE 120

Query: 121 SPSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTG 180
           S SK SLL +S+WTVKDVDSDAIDALQVEL C+S  ++ITY+++LY  SMATAVIVKN G
Sbjct: 121 SGSKGSLLSASEWTVKDVDSDAIDALQVELGCTSGTLDITYVISLYPLSMATAVIVKNNG 180

Query: 181 LKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFS 240
            K +TL SAILSHF F++R+G AIQGL+GCSYC+HPPLSSPFEILSP EA+KAE+P  FS
Sbjct: 181 KKAVTLNSAILSHFIFQKREGTAIQGLEGCSYCTHPPLSSPFEILSPSEAIKAEDPGLFS 240

Query: 241 FGSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGF 300
           FG EP+ K G W+ Q VP T+LK++ SRVYA+PP ER KP Y+T PSKYETLDQ  R  F
Sbjct: 241 FGYEPENKPGIWTPQVVPITILKHRLSRVYASPPTERPKPFYNTPPSKYETLDQ-GRKLF 300

Query: 301 PLVIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
             VIR+G+EDIY+SSPGS S K+G+DYFICTGPASMLVPV + PGE WRGAQVIEHDNL
Sbjct: 301 FRVIRIGYEDIYVSSPGSFSEKYGKDYFICTGPASMLVPVVINPGEDWRGAQVIEHDNL 354

[Close]
BLAST of Lsi03G012980 vs. TAIR10
Match: AT1G64770.3 (AT1G64770.3 NDH-dependent cyclic electron flow 1)

HSP 1 Score: 327.0 bits (837), Expect = 1.4e-89
Identity = 167/293 (57.00%), Postives = 219/293 (74.74%), Query Frame = 1 

Query: 1   MASLVCLPL-PKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDL 60
           MASL+   L PKP  +R+S S+  + +  T     + L DKFGRKGI F +SN IP ++L
Sbjct: 1   MASLISFSLLPKPKAVRSSISAPQTQTINT-----EKLEDKFGRKGIKFSESNNIPMVEL 60

Query: 61  TVRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP--TAKGGIALVIDDASDSPSK 120
            VRNGSSL+L++SDAH+ SYKPKVYWKD+GFEEVL+T     ++GG+ +VI +  +    
Sbjct: 61  KVRNGSSLKLSLSDAHVLSYKPKVYWKDEGFEEVLYTVDGDESRGGVGVVIVNGEEPKGG 120

Query: 121 TSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLKPL 180
           +S++   DW+VKD DSDAIDALQ+ELSC++  ++ITYIV+LY  SMATA++VKN G KP+
Sbjct: 121 SSVISGCDWSVKDTDSDAIDALQIELSCTAGVLDITYIVSLYPVSMATALVVKNNGRKPV 180

Query: 181 TLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFGSE 240
           TLK  I+S+ +FK+R GA IQGL+GCSYC +PPLSSPFE+LSP EAMKAE   W  FGSE
Sbjct: 181 TLKPGIMSYLRFKKRSGAGIQGLKGCSYCPNPPLSSPFELLSPSEAMKAESSGW--FGSE 240

Query: 241 PQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKR 291
              K G W+++D   T+L+ K SR+Y APPAERLK VY+T PSK+ET+DQ K+
Sbjct: 241 EGEKPGIWAVEDSVITLLEKKMSRIYGAPPAERLKAVYNTPPSKFETIDQKKK 286

[Close]
BLAST of Lsi03G012980 vs. TAIR10
Match: AT5G57330.1 (AT5G57330.1 Galactose mutarotase-like superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 9.7e-06
Identity = 26/77 (33.77%), Postives = 42/77 (54.55%), Query Frame = 1 

Query: 274 VYHTTPSKYETLDQVKRNGFPLVIRMGFEDIYISSPGSLSSKF-----GEDY--FICTGP 333
           +Y +TP+K   LD  K+  F ++ + G  D  + +P    SK       EDY   +C   
Sbjct: 214 IYLSTPTKIAILDHEKKRTF-VIRKDGLADAVVWNPWDKKSKTISDLGDEDYKHMLCVEA 273

Query: 334 ASMLVPVTVKPGEQWRG 344
           A++  P+T+KPGE+W+G
Sbjct: 274 AAIERPITLKPGEEWKG 289

[Close]
BLAST of Lsi03G012980 vs. NCBI nr
Match: gi|778686049|ref|XP_011652321.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 639.4 bits (1648), Expect = 3.6e-180
Identity = 324/352 (92.05%), Postives = 333/352 (94.60%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASLVCLPLPKPN+IRASSSSSSS S     ST DSLNDKFGRKG HFHDSNG+PTLDLT
Sbjct: 1   MASLVCLPLPKPNLIRASSSSSSSTSFP---STVDSLNDKFGRKGFHFHDSNGVPTLDLT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDSPSKTSL 120
           VRNGSSLRL ISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDS SK+SL
Sbjct: 61  VRNGSSLRLRISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDSSSKSSL 120

Query: 121 LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLKPLTLK 180
           LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSES+ATAVIVKNTGLKPLTLK
Sbjct: 121 LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESLATAVIVKNTGLKPLTLK 180

Query: 181 SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFGSEPQG 240
           SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSP EAMK EE DWFSFGSEPQG
Sbjct: 181 SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKVEESDWFSFGSEPQG 240

Query: 241 KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFPLVIRMG 300
           KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKP+YHTTPSKYETLDQ  R  F  VIRMG
Sbjct: 241 KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQ-GRELFFRVIRMG 300

Query: 301 FEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
           FEDIY+SSPGSLS+KFG+D+FICTGPASMLVPVTVKPGEQWRGAQVIEHDNL
Sbjct: 301 FEDIYVSSPGSLSNKFGKDHFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 348

[Close]
BLAST of Lsi03G012980 vs. NCBI nr
Match: gi|659130738|ref|XP_008465324.1| (PREDICTED: uncharacterized protein LOC103502972 [Cucumis melo])

HSP 1 Score: 636.7 bits (1641), Expect = 2.4e-179
Identity = 320/352 (90.91%), Postives = 335/352 (95.17%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASLVCLPLPKPN+IRASSSSSS++      STADSLNDKF RKG HFHDSNG+PTLDLT
Sbjct: 1   MASLVCLPLPKPNLIRASSSSSSTSFP----STADSLNDKFARKGFHFHDSNGVPTLDLT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTPTAKGGIALVIDDASDSPSKTSL 120
           VRNGSSLRL+ISDAHLTSYKPKVYWKDDGFEE+LFTTPTAKGGIALVIDDASDS SK+SL
Sbjct: 61  VRNGSSLRLHISDAHLTSYKPKVYWKDDGFEEILFTTPTAKGGIALVIDDASDSSSKSSL 120

Query: 121 LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGLKPLTLK 180
           LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSES+ATAVIVKNTGLKPLTLK
Sbjct: 121 LPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESLATAVIVKNTGLKPLTLK 180

Query: 181 SAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSFGSEPQG 240
           SAILSHFKFK+RDGAAIQGLQGCSYCSHPPLSSPFEILSP EAMK EEPDWFSFGSEPQG
Sbjct: 181 SAILSHFKFKQRDGAAIQGLQGCSYCSHPPLSSPFEILSPSEAMKVEEPDWFSFGSEPQG 240

Query: 241 KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFPLVIRMG 300
           KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKP+YHTTPSKYETLDQ  R  F  VIRMG
Sbjct: 241 KAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPIYHTTPSKYETLDQ-GRELFFRVIRMG 300

Query: 301 FEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
           FEDIY+SSPGSLS+KFG+D+FICTGPASMLVPVTVKPGEQW+GAQVIEHDNL
Sbjct: 301 FEDIYVSSPGSLSNKFGKDHFICTGPASMLVPVTVKPGEQWKGAQVIEHDNL 347

[Close]
BLAST of Lsi03G012980 vs. NCBI nr
Match: gi|255568932|ref|XP_002525436.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Ricinus communis])

HSP 1 Score: 483.4 bits (1243), Expect = 3.3e-133
Identity = 248/358 (69.27%), Postives = 287/358 (80.17%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASL+ L LPKP II+A+SS++++    T+  + D L +KFGRKGI F +SN IP  +LT
Sbjct: 1   MASLLSLSLPKPTIIKATSSTTTT----TTLPSPDVLEEKFGRKGIKFLESNNIPIAELT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP------TAKGGIALVIDDASDS 120
           VRNGSSLRL I DAH+TSYKPKVYWKDDGF E+L+T P       A+GGI LVI+DASDS
Sbjct: 61  VRNGSSLRLQIPDAHVTSYKPKVYWKDDGFHEILYTVPGKDSSSKARGGIGLVINDASDS 120

Query: 121 PSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTGL 180
            SK SL+ +S+WTVKDVDSDAIDALQVEL C+S  ++I+YIV+LY ESMATAVIVKN G 
Sbjct: 121 GSKGSLITNSEWTVKDVDSDAIDALQVELGCTSGTLDISYIVSLYPESMATAVIVKNNGR 180

Query: 181 KPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFSF 240
           KP+TL SAILSH KFKRR  AA+QG +GCSY  HPPLSSPFEILSP EAMK+E P  F F
Sbjct: 181 KPVTLTSAILSHLKFKRRQKAAVQGFRGCSYLPHPPLSSPFEILSPGEAMKSESPGLFDF 240

Query: 241 GSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGFP 300
            SEP+ K G W +QDVPFT+LKNKFSR+YAAPP ERLK  Y+T PSKYETLDQ     F 
Sbjct: 241 SSEPEDKLGIWGVQDVPFTILKNKFSRIYAAPPQERLKAFYNTPPSKYETLDQGLELFF- 300

Query: 301 LVIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
            VIRMGFED Y+ SPGSLS K+GE+YFICTGPA+M+VPV VKPGE WRGAQVIEHDNL
Sbjct: 301 RVIRMGFEDTYMGSPGSLSEKYGEEYFICTGPAAMIVPVIVKPGEDWRGAQVIEHDNL 353

[Close]
BLAST of Lsi03G012980 vs. NCBI nr
Match: gi|595937516|ref|XP_007215595.1| (hypothetical protein PRUPE_ppa007725mg [Prunus persica])

HSP 1 Score: 479.2 bits (1232), Expect = 6.3e-132
Identity = 247/361 (68.42%), Postives = 290/361 (80.33%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASL+   +P   +IRASSS S SA    + S  ++L +KFGRKGI F +S+ IP ++L 
Sbjct: 1   MASLLSFSVPNSKMIRASSSQSVSAP---TVSVPENLTEKFGRKGIKFLESDNIPIVELR 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP---------TAKGGIALVIDDA 120
           VRNGSSLRL I +AH+TSYKPKVYWKDDGF+EVL+T P          AKGGI LV++D 
Sbjct: 61  VRNGSSLRLQIPNAHVTSYKPKVYWKDDGFQEVLYTIPGNGTDPNSTKAKGGIGLVLNDV 120

Query: 121 SDSPSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKN 180
           S++ SK SL+ +S+WTVKDVDSD+IDALQVELS +S  +EITY+V+LY  SMATAVIV+N
Sbjct: 121 SEAGSKGSLVSTSEWTVKDVDSDSIDALQVELSSTSGTLEITYVVSLYPVSMATAVIVRN 180

Query: 181 TGLKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDW 240
            G KP+TL +AILSHFKFKRR GAAIQGL+GC+Y + PPLSSPFEILSP EAMKA+ P W
Sbjct: 181 KGRKPVTLTNAILSHFKFKRRSGAAIQGLKGCAYTALPPLSSPFEILSPAEAMKADTPGW 240

Query: 241 FSFGSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRN 300
           F FGS+P+ K GSW+ QDVPFT+LKNK SRVYAAPP ERLKP+Y+T PSKYETLDQ  R 
Sbjct: 241 FDFGSQPEEKPGSWTHQDVPFTILKNKLSRVYAAPPKERLKPIYNTPPSKYETLDQ-GRE 300

Query: 301 GFPLVIRMGFEDIYISSPGSLSSKFGEDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDN 353
            F  VIRMGFEDIY+SSPGS   K+GE+YFICTGPASMLVPV VKPGE WRGAQVIEHDN
Sbjct: 301 LFYRVIRMGFEDIYLSSPGSFYEKYGEEYFICTGPASMLVPVVVKPGEDWRGAQVIEHDN 357

[Close]
BLAST of Lsi03G012980 vs. NCBI nr
Match: gi|658015499|ref|XP_008343089.1| (PREDICTED: uncharacterized protein LOC103405853 [Malus domestica])

HSP 1 Score: 475.7 bits (1223), Expect = 7.0e-131
Identity = 244/360 (67.78%), Postives = 292/360 (81.11%), Query Frame = 1 

Query: 1   MASLVCLPLPKPNIIRASSSSSSSASAATSASTADSLNDKFGRKGIHFHDSNGIPTLDLT 60
           MASL+   +P   +IRA    SS+A++A + S  ++L+DKFGRKGI F +S+ IP ++LT
Sbjct: 1   MASLLSFSVPTSKMIRA----SSTAASAPAISVPETLSDKFGRKGIXFSESDSIPMVELT 60

Query: 61  VRNGSSLRLNISDAHLTSYKPKVYWKDDGFEEVLFTTP-------TAKGGIALVIDDASD 120
           VRNGSSL+L I +AH+TSYKPKVYW DDGF+EVL+T P        AKGGI LV++DAS+
Sbjct: 61  VRNGSSLKLQIPNAHVTSYKPKVYWNDDGFQEVLYTIPGNETDSIKAKGGIGLVLNDASE 120

Query: 121 SPSKTSLLPSSDWTVKDVDSDAIDALQVELSCSSKQMEITYIVTLYSESMATAVIVKNTG 180
           + SK S+L +S+WTVKDVDSDAIDALQVELS +S  ++ITY+VTLY  SMATAVIVKN G
Sbjct: 121 AGSKGSILSASEWTVKDVDSDAIDALQVELSSTSGTLDITYVVTLYPVSMATAVIVKNKG 180

Query: 181 LKPLTLKSAILSHFKFKRRDGAAIQGLQGCSYCSHPPLSSPFEILSPFEAMKAEEPDWFS 240
            KP+T+ +AILSHFKFKRR GAAIQGL+GC Y +HPP SSPFEI+SP EAMKA+ P WFS
Sbjct: 181 RKPVTMTNAILSHFKFKRRGGAAIQGLKGCGYTAHPPPSSPFEIMSPGEAMKADTPGWFS 240

Query: 241 FGSEPQGKAGSWSLQDVPFTMLKNKFSRVYAAPPAERLKPVYHTTPSKYETLDQVKRNGF 300
           FGSEPQ K GSWS QDVP+T+LKNK SRVYAAPP ERLKPVY+T PSKYETLD   R+ F
Sbjct: 241 FGSEPQEKPGSWSRQDVPYTILKNKLSRVYAAPPQERLKPVYNTPPSKYETLD-XGRDLF 300

Query: 301 PLVIRMGFEDIYISSPGSLSSKFG-EDYFICTGPASMLVPVTVKPGEQWRGAQVIEHDNL 353
             VIRMGFEDIY+SSPGS   K+G ++YFICTGPAS+LVPV + P E+WRGAQVIEHDNL
Sbjct: 301 YRVIRMGFEDIYLSSPGSFYEKYGSKEYFICTGPASLLVPVVINPAEEWRGAQVIEHDNL 355

The following BLAST results are available for this feature:
BLAST of Lsi03G012980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PNSB2_ARATH1.2e-11157.87Photosynthetic NDH subunit of subcomplex B 2, chloroplastic OS=Arabidopsis thali... [more]
AAPC_CENCI9.1e-0633.77Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1[more]
BLAST of Lsi03G012980 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCL5_CUCSA2.5e-18092.05Uncharacterized protein OS=Cucumis sativus GN=Csa_3G843790 PE=4 SV=1[more]
B9SHG7_RICCO2.3e-13369.27Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1121740 PE=4 SV=1[more]
A0A0F7GZM2_9ROSI3.4e-13268.63Photosynthetic NDH subcomplex B 2 OS=Hypseocharis bilobata GN=PnsB2 PE=2 SV=1[more]
M5WSX3_PRUPE4.4e-13268.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007725mg PE=4 SV=1[more]
A0A0F7GZL7_9ROSI3.7e-13167.97Photosynthetic NDH subcomplex B 2 OS=Francoa sonchifolia GN=PnsB2 PE=2 SV=1[more]
BLAST of Lsi03G012980 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G64770.31.4e-8957.00 NDH-dependent cyclic electron flow 1[more]
AT5G57330.19.7e-0633.77 Galactose mutarotase-like superfamily protein[more]
BLAST of Lsi03G012980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778686049|ref|XP_011652321.1|3.6e-18092.05PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Cucumis ... [more]
gi|659130738|ref|XP_008465324.1|2.4e-17990.91PREDICTED: uncharacterized protein LOC103502972 [Cucumis melo][more]
gi|255568932|ref|XP_002525436.1|3.3e-13369.27PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic [Ricinus ... [more]
gi|595937516|ref|XP_007215595.1|6.3e-13268.42hypothetical protein PRUPE_ppa007725mg [Prunus persica][more]
gi|658015499|ref|XP_008343089.1|7.0e-13167.78PREDICTED: uncharacterized protein LOC103405853 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR014718GH-type_carb-bd
IPR011013Gal_mutarotase_sf_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0009773 photosynthetic electron transport in photosystem I
cellular_component GO:0005575 cellular_component
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G012980.1Lsi03G012980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011013Galactose mutarotase-like domainunknownSSF74650Galactose mutarotase-likecoord: 49..209
score: 3.45E-9coord: 256..347
score: 3.4
IPR014718Glycoside hydrolase-type carbohydrate-bindingGENE3DG3DSA:2.70.98.10coord: 40..207
score: 1.3E-24coord: 246..348
score: 1.3
NoneNo IPR availablePANTHERPTHR11122APOSPORY-ASSOCIATED PROTEIN C-RELATEDcoord: 239..352
score: 1.3E-167coord: 1..209
score: 1.3E
NoneNo IPR availablePANTHERPTHR11122:SF18NDH-DEPENDENT CYCLIC ELECTRON FLOW 1coord: 1..209
score: 1.3E-167coord: 239..352
score: 1.3E