Lsi03G006240 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G006240
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCysteine-rich venom protein
Locationchr03 : 7766711 .. 7767208 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTTGCCAACATTCTCTCAACACTTTGTTTAATGGGGCTAACCCTAACCATAGCTTCCATTGCCCCCATCTTGGCCAAAAGCTACCCTAAAAACTACATTGCCGCCCACAATGCCATTCGTGCAGAGGTTGGCGTCGAGCCCCTCCATTGGAACAACACTTTGGCTGCCTATGCCCAGAATTACGCCAACACGAAGATCACTACTTGCCAAATGGAGCACTCTGGAGGACCTTATGGCGAAAACCTAGCAGAGGGATACGAAGTGATGACAGCAGAGACGGCTGTGAATCTTTGGGCCGACGAGAAGAAACATTATGACCACAATTCTAACACGTGTGTCAACGATTCTAGCCAATGCCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCGATTGGTTGTGCCCAAGTGAAGTGCCAAAACAATTGGGTTTTTCTAATATGCAATTATTATCCTCCTGGCAACTATATAGGCCAACGTCCATATTAA

mRNA sequence

ATGGCATTTGCCAACATTCTCTCAACACTTTGTTTAATGGGGCTAACCCTAACCATAGCTTCCATTGCCCCCATCTTGGCCAAAAGCTACCCTAAAAACTACATTGCCGCCCACAATGCCATTCGTGCAGAGGTTGGCGTCGAGCCCCTCCATTGGAACAACACTTTGGCTGCCTATGCCCAGAATTACGCCAACACGAAGATCACTACTTGCCAAATGGAGCACTCTGGAGGACCTTATGGCGAAAACCTAGCAGAGGGATACGAAGTGATGACAGCAGAGACGGCTGTGAATCTTTGGGCCGACGAGAAGAAACATTATGACCACAATTCTAACACGTGTGTCAACGATTCTAGCCAATGCCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCGATTGGTTGTGCCCAAGTGAAGTGCCAAAACAATTGGGTTTTTCTAATATGCAATTATTATCCTCCTGGCAACTATATAGGCCAACGTCCATATTAA

Coding sequence (CDS)

ATGGCATTTGCCAACATTCTCTCAACACTTTGTTTAATGGGGCTAACCCTAACCATAGCTTCCATTGCCCCCATCTTGGCCAAAAGCTACCCTAAAAACTACATTGCCGCCCACAATGCCATTCGTGCAGAGGTTGGCGTCGAGCCCCTCCATTGGAACAACACTTTGGCTGCCTATGCCCAGAATTACGCCAACACGAAGATCACTACTTGCCAAATGGAGCACTCTGGAGGACCTTATGGCGAAAACCTAGCAGAGGGATACGAAGTGATGACAGCAGAGACGGCTGTGAATCTTTGGGCCGACGAGAAGAAACATTATGACCACAATTCTAACACGTGTGTCAACGATTCTAGCCAATGCCTCCATTATACACAGTTGGTATGGAGGAACACCAAATCGATTGGTTGTGCCCAAGTGAAGTGCCAAAACAATTGGGTTTTTCTAATATGCAATTATTATCCTCCTGGCAACTATATAGGCCAACGTCCATATTAA

Protein sequence

MAFANILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY
Homology
[Close]
BLAST of Lsi03G006240 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.4e-43
Identity = 83/159 (52.20%), Postives = 109/159 (68.55%), Query Frame = 1 

Query: 7   LSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANT 66
           L+T+    +T  I  I    A++ P++Y+  HNA R +VGV P+ W+N LAAYAQNYAN 
Sbjct: 4   LTTIVACFITFAIL-IHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQ 63

Query: 67  KITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQ 126
           +I  C M HS GPYGENLA  +  + A  AV +W DEK+ YD+NSN+CV     C HYTQ
Sbjct: 64  RIGDCGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCV--GGVCGHYTQ 123

Query: 127 LVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           +VWRN+  +GCA+V+  N W F+ CNY PPGN+IGQRP+
Sbjct: 124 VVWRNSVRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]
BLAST of Lsi03G006240 vs. Swiss-Prot
Match: PR1B_TOBAC (Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.0e-41
Identity = 77/140 (55.00%), Postives = 98/140 (70.00%), Query Frame = 1 

Query: 27  AKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHSGGPYGENLAE 86
           A++  ++Y+ AHN  RA+VGVEPL W+N +AAYAQNY +     C + HS G YGENLA+
Sbjct: 30  AQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENLAQ 89

Query: 87  GY-EVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNTKSIGCAQVKCQNN 146
           G  + MTA  AV +W DEK++YDH+SNTC      C HYTQ+VWRN+  +GCA+VKC N 
Sbjct: 90  GSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVCGHYTQVVWRNSVRVGCARVKCNNG 149

Query: 147 WVFLICNYYPPGNYIGQRPY 166
              + CNY PPGN IGQ PY
Sbjct: 150 GYVVSCNYDPPGNVIGQSPY 168

[Close]
BLAST of Lsi03G006240 vs. Swiss-Prot
Match: PR1A_TOBAC (Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-40
Identity = 81/164 (49.39%), Postives = 108/164 (65.85%), Query Frame = 1 

Query: 3   FANILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQN 62
           F+ + S L +  L L +       A++  ++Y+ AHN  RA+VGVEPL W++ +AAYAQN
Sbjct: 6   FSQLPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQN 65

Query: 63  YANTKITTCQMEHSGGPYGENLAEGY-EVMTAETAVNLWADEKKHYDHNSNTCVNDSSQC 122
           YA+     C + HS G YGENLAEG  + MTA  AV +W DEK++YDH+SNTC      C
Sbjct: 66  YASQLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCA-QGQVC 125

Query: 123 LHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
            HYTQ+VWRN+  +GCA+V+C N    + CNY PPGNY G+ PY
Sbjct: 126 GHYTQVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]
BLAST of Lsi03G006240 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39
Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 1 

Query: 27  AKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHSGGPYGENLAE 86
           A++  +N++ AHNA R  VGV P+ W++ LAAYAQNYAN +   C M HS GPYGENLA 
Sbjct: 21  AQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAA 80

Query: 87  GYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNTKSIGCAQVKCQNNW 146
            +  + A  AV +W DEK+ YD+NSNTC      C HYTQ+VWR +  +GCA+V+C + W
Sbjct: 81  AFPQLNAAGAVKMWDDEKQWYDYNSNTCA-PGKVCGHYTQVVWRKSVRLGCARVRCNSGW 140

Query: 147 VFLICNYYPPGNYI 161
           VF+ CNY PPGNYI
Sbjct: 141 VFITCNYDPPGNYI 153

[Close]
BLAST of Lsi03G006240 vs. Swiss-Prot
Match: PR13_HORVU (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.5e-38
Identity = 78/157 (49.68%), Postives = 103/157 (65.61%), Query Frame = 1 

Query: 12  LMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTC 71
           L+ L ++ A +    A++ P++Y++ HNA RA VGV  + W+  L A+AQNYAN +I  C
Sbjct: 9   LLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDC 68

Query: 72  QMEHSGGPYGENLAEGY--EVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVW 131
           +++HSGGPYGEN+  G       A  AVN W  EKK YD+ SNTC      C HYTQ+VW
Sbjct: 69  KLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCA-AGKVCGHYTQVVW 128

Query: 132 RNTKSIGCAQVKCQNN-WVFLICNYYPPGNYIGQRPY 166
           R + SIGCA+V C NN  VF+ CNY P GN +GQ+PY
Sbjct: 129 RASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]
BLAST of Lsi03G006240 vs. TrEMBL
Match: A0A0A0K7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.0e-78
Identity = 143/171 (83.63%), Postives = 151/171 (88.30%), Query Frame = 1 

Query: 1   MAFANILSTLCLMGLTLTI------ASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNN 60
           M FANILSTLCL+GLTLT+      AS AP LAKS PKNYI AHNA+RA VGVEPLHWN+
Sbjct: 1   MGFANILSTLCLLGLTLTLTLTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNS 60

Query: 61  TLAAYAQNYANTKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTC 120
           TLA YAQNYANTKI TCQMEHSGGPYGENLAEG EVMTAETAV+LWADEKKHYD+NSNTC
Sbjct: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120

Query: 121 VNDSSQCLHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
            ND S CLHYTQLVW NTKS+GCAQVKCQNNWVFLIC+YYPPGNY GQRPY
Sbjct: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]
BLAST of Lsi03G006240 vs. TrEMBL
Match: A0A0A0K4C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.0e-52
Identity = 98/160 (61.25%), Postives = 122/160 (76.25%), Query Frame = 1 

Query: 6   ILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYAN 65
           +L +  +MGL   +ASI   LA++  ++++ AHNA RA+VGV P+ WN TLAAYAQ YAN
Sbjct: 7   LLISFMMMGLITQLASIT--LAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYAN 66

Query: 66  TKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYT 125
            KI TC+M+HS GPYGENLAEGY  MTA  AVN W  EKK+YDH+SN C+ D  +C HYT
Sbjct: 67  KKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYT 126

Query: 126 QLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           Q+VWR TK +GCA+VKC NNW+F+ICNY PP NY+GQ PY
Sbjct: 127 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]
BLAST of Lsi03G006240 vs. TrEMBL
Match: A0A0A0K2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.6e-50
Identity = 92/155 (59.35%), Postives = 116/155 (74.84%), Query Frame = 1 

Query: 11  CLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITT 70
           C++GL L +A I+P LA S P++++ AHNAIRA+ GV P+ WN T+A+YA+ YA TK  T
Sbjct: 12  CVVGLFLILAPISPTLANSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYAKTKTAT 71

Query: 71  CQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWR 130
           C+MEHS GPYGENLAE +E  TAE  VN WA E K YDH SN CV +  +C H+ Q+VW+
Sbjct: 72  CEMEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEE--ECGHFLQIVWK 131

Query: 131 NTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           +T SIGCA+VKC NN++F ICNYYPPG Y  Q PY
Sbjct: 132 DTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

[Close]
BLAST of Lsi03G006240 vs. TrEMBL
Match: A0A0A0K6A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-49
Identity = 88/139 (63.31%), Postives = 112/139 (80.58%), Query Frame = 1 

Query: 27  AKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHSGGPYGENLAE 86
           A++ P++++  HN IRA VGV P+ W++TLAAYAQ+YA++K+ TC+MEHS GPYGENLAE
Sbjct: 25  AQNSPQDFVDTHNDIRAAVGVGPVSWDDTLAAYAQSYADSKMDTCEMEHSNGPYGENLAE 84

Query: 87  GYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNTKSIGCAQVKCQNNW 146
           GY+ MT   AV  WA EKK Y+H+ N CV D  +C HYTQ+VWR+T +IGC +VKC+NNW
Sbjct: 85  GYDEMTGVEAVRFWATEKKFYNHHLNRCVGD--ECGHYTQIVWRHTTNIGCGRVKCENNW 144

Query: 147 VFLICNYYPPGNYIGQRPY 166
           VF+ICNY PPGNYIGQ PY
Sbjct: 145 VFVICNYNPPGNYIGQHPY 161

[Close]
BLAST of Lsi03G006240 vs. TrEMBL
Match: A0A0A0K4C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.4e-48
Identity = 93/165 (56.36%), Postives = 120/165 (72.73%), Query Frame = 1 

Query: 1   MAFANILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYA 60
           MA +N  S++CL+ LTLTI  I   +A + P+NY+ AHNA+RAEVG +P+ W+  LA YA
Sbjct: 4   MALSNFPSSICLIMLTLTIPMI---VAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 63

Query: 61  QNYANTKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQ 120
           QNY ++KI+TC+M HS G YGENLA    ++TA  AV  WADEKK+YDHNSN CV    +
Sbjct: 64  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCV--GGE 123

Query: 121 CLHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           C HYTQLVW+N+  IGCA +KC+NNW  + CNY P GN +G+ PY
Sbjct: 124 CRHYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

[Close]
BLAST of Lsi03G006240 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-42
Identity = 75/153 (49.02%), Postives = 105/153 (68.63%), Query Frame = 1 

Query: 13  MGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQ 72
           + +T  +  I  + A+  P++++A HN  RAEVGV PL W+  +AAYA+NYAN +   C 
Sbjct: 12  LAITFFLVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCA 71

Query: 73  MEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNT 132
           M+HS G YGEN+A     MT   AV++W DE+  YD++SNTC  D  QC HYTQ+VWRN+
Sbjct: 72  MKHSSGSYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWD-KQCGHYTQVVWRNS 131

Query: 133 KSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           + +GCA+V+C N   F+ CNY PPGN++G+ PY
Sbjct: 132 ERLGCAKVRCNNGQTFITCNYDPPGNWVGEWPY 163

[Close]
BLAST of Lsi03G006240 vs. TAIR10
Match: AT3G19690.1 (AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 163.7 bits (413), Expect = 9.7e-41
Identity = 72/150 (48.00%), Postives = 104/150 (69.33%), Query Frame = 1 

Query: 17  LTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHS 76
           L IA     LA+   + ++ AHN  R EVG++PL W++ +AAYA +YAN +I  C + HS
Sbjct: 12  LAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVHS 71

Query: 77  GGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVN-DSSQCLHYTQLVWRNTKSI 136
            GP+GEN+A     M+AE A  +W +EK++YD++SNTC + +   CLHYTQ+VW+NT  +
Sbjct: 72  NGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVRL 131

Query: 137 GCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           GCA+V C +   F+ CNY PPGNYIG++P+
Sbjct: 132 GCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

[Close]
BLAST of Lsi03G006240 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 161.0 bits (406), Expect = 6.3e-40
Identity = 71/136 (52.21%), Postives = 97/136 (71.32%), Query Frame = 1 

Query: 31  PKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHSGGPYGENLAEGYEV 90
           P+  +  HN  RA VGV P+ WN TLA YAQ+YA+ +   C M+HS GP+GENLA G+  
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAGWGT 101

Query: 91  MTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNTKSIGCAQVKCQNN-WVFL 150
           M+   A   W  EK++YD++SNTC  D   C HYTQ+VWR++  +GCA V+C+N+ ++++
Sbjct: 102 MSGPVATEYWMTEKENYDYDSNTCGGD-GVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 151 ICNYYPPGNYIGQRPY 166
           IC+Y PPGNYIGQRPY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

[Close]
BLAST of Lsi03G006240 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 159.5 bits (402), Expect = 1.8e-39
Identity = 71/140 (50.71%), Postives = 97/140 (69.29%), Query Frame = 1 

Query: 27  AKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTKITTCQMEHSGGPYGENLAE 86
           A++ P++Y+ +HN  RA+VGV  + W+ TLAAYA NY+N +   C + HS GPYGENLA+
Sbjct: 23  AQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAK 82

Query: 87  GYEV-MTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQLVWRNTKSIGCAQVKCQNN 146
           G     +A +AV LW DEK +Y +  N C     QCLHYTQ+VWR++  IGCA+V+C N 
Sbjct: 83  GSSSSFSAISAVKLWVDEKPYYSYAYNNCTG-GKQCLHYTQVVWRDSVKIGCARVQCTNT 142

Query: 147 WVFLICNYYPPGNYIGQRPY 166
           W F+ CNY  PGN++G+ PY
Sbjct: 143 WWFVSCNYNSPGNWVGEYPY 161

[Close]
BLAST of Lsi03G006240 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 157.9 bits (398), Expect = 5.3e-39
Identity = 71/158 (44.94%), Postives = 105/158 (66.46%), Query Frame = 1 

Query: 8   STLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANTK 67
           S + ++   L  A + P+ A+   ++Y+ AHN  R+++GV P+ W+  LAAYA+NYAN  
Sbjct: 7   SRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQL 66

Query: 68  ITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQL 127
              C++ HS GPYGENLA+    ++   AVNLW +EK +Y++++NTC   +  C HYTQ+
Sbjct: 67  KGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC---NGVCGHYTQV 126

Query: 128 VWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           VWRN+  +GCA+V+C N    + CNY PPGNY  Q+PY
Sbjct: 127 VWRNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

[Close]
BLAST of Lsi03G006240 vs. NCBI nr
Match: gi|659110139|ref|XP_008455069.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 3.9e-84
Identity = 145/165 (87.88%), Postives = 156/165 (94.55%), Query Frame = 1 

Query: 1   MAFANILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYA 60
           M FANILST CL+GLTLT+AS APILAKSYPKNY+ AHNAIRAEVGV+PLHWN+TLAAYA
Sbjct: 1   MGFANILSTFCLLGLTLTLASTAPILAKSYPKNYVDAHNAIRAEVGVDPLHWNSTLAAYA 60

Query: 61  QNYANTKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQ 120
           QNYANTKI TCQMEHSGGPYGENLAEGYE MTAE AV+LWADEKKHYD+NSNTC ND+S 
Sbjct: 61  QNYANTKIATCQMEHSGGPYGENLAEGYEEMTAEMAVSLWADEKKHYDYNSNTCTNDASN 120

Query: 121 CLHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           CLHYTQLVWRNTKS+GCA+VKCQNNWVFLIC+YYPPGNYIGQRPY
Sbjct: 121 CLHYTQLVWRNTKSVGCAEVKCQNNWVFLICSYYPPGNYIGQRPY 165

[Close]
BLAST of Lsi03G006240 vs. NCBI nr
Match: gi|778724756|ref|XP_004137080.2| (PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 143/171 (83.63%), Postives = 151/171 (88.30%), Query Frame = 1 

Query: 1   MAFANILSTLCLMGLTLTI------ASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNN 60
           M FANILSTLCL+GLTLT+      AS AP LAKS PKNYI AHNA+RA VGVEPLHWN+
Sbjct: 1   MGFANILSTLCLLGLTLTLTLTLTLASTAPSLAKSSPKNYIDAHNAVRAAVGVEPLHWNS 60

Query: 61  TLAAYAQNYANTKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTC 120
           TLA YAQNYANTKI TCQMEHSGGPYGENLAEG EVMTAETAV+LWADEKKHYD+NSNTC
Sbjct: 61  TLADYAQNYANTKIATCQMEHSGGPYGENLAEGNEVMTAETAVSLWADEKKHYDYNSNTC 120

Query: 121 VNDSSQCLHYTQLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
            ND S CLHYTQLVW NTKS+GCAQVKCQNNWVFLIC+YYPPGNY GQRPY
Sbjct: 121 SNDPSNCLHYTQLVWSNTKSVGCAQVKCQNNWVFLICSYYPPGNYNGQRPY 171

[Close]
BLAST of Lsi03G006240 vs. NCBI nr
Match: gi|659110141|ref|XP_008455070.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 8.8e-52
Identity = 94/159 (59.12%), Postives = 121/159 (76.10%), Query Frame = 1 

Query: 7   LSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYANT 66
           +S  C++GL+L +A I+P +AKS P+ ++ AHNAIRA+ GV P+ WN TLA+YA+NYA T
Sbjct: 8   VSAFCVVGLSLILAPISPTIAKSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENYAKT 67

Query: 67  KITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYTQ 126
           ++ TC+MEHS GPYGENLAE +E  TAE  VN WA E K YDH SN CV +  +C H+ Q
Sbjct: 68  RVATCEMEHSMGPYGENLAEAFEKTTAELTVNYWATEDKFYDHKSNKCVEE--ECGHFLQ 127

Query: 127 LVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           +VW++T SIGCA+VKC NN++F ICNYYPPG Y  Q PY
Sbjct: 128 VVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

[Close]
BLAST of Lsi03G006240 vs. NCBI nr
Match: gi|449438289|ref|XP_004136921.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 98/160 (61.25%), Postives = 122/160 (76.25%), Query Frame = 1 

Query: 6   ILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYAN 65
           +L +  +MGL   +ASI   LA++  ++++ AHNA RA+VGV P+ WN TLAAYAQ YAN
Sbjct: 7   LLISFMMMGLITQLASIT--LAQNSHQDFVNAHNAARAKVGVGPVSWNYTLAAYAQTYAN 66

Query: 66  TKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYT 125
            KI TC+M+HS GPYGENLAEGY  MTA  AVN W  EKK+YDH+SN C+ D  +C HYT
Sbjct: 67  KKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYT 126

Query: 126 QLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           Q+VWR TK +GCA+VKC NNW+F+ICNY PP NY+GQ PY
Sbjct: 127 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPDNYVGQFPY 162

[Close]
BLAST of Lsi03G006240 vs. NCBI nr
Match: gi|659110143|ref|XP_008455071.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 209.5 bits (532), Expect = 4.4e-51
Identity = 98/160 (61.25%), Postives = 123/160 (76.88%), Query Frame = 1 

Query: 6   ILSTLCLMGLTLTIASIAPILAKSYPKNYIAAHNAIRAEVGVEPLHWNNTLAAYAQNYAN 65
           +L +  +MGL +T+A I   LA++  ++++ AHN  RA+VGV P+ WN TLAAYAQ YAN
Sbjct: 7   LLISFMMMGL-ITLAPIT--LAQNSHQDFVNAHNNARAKVGVGPVSWNYTLAAYAQTYAN 66

Query: 66  TKITTCQMEHSGGPYGENLAEGYEVMTAETAVNLWADEKKHYDHNSNTCVNDSSQCLHYT 125
            KI TC+M+HS GPYGENLAEGY  MTA  AVN W  EKK+YDH+SN C+ D  +C HYT
Sbjct: 67  KKIGTCEMQHSYGPYGENLAEGYGEMTAVEAVNFWVSEKKYYDHHSNRCIGD--ECRHYT 126

Query: 126 QLVWRNTKSIGCAQVKCQNNWVFLICNYYPPGNYIGQRPY 166
           Q+VWR TK +GCA+VKC NNW+F+ICNY PPGNY+GQ PY
Sbjct: 127 QVVWRGTKHVGCARVKCHNNWIFVICNYDPPGNYVGQFPY 161

The following BLAST results are available for this feature:
BLAST of Lsi03G006240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRB1_TOBAC4.4e-4352.20Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1[more]
PR1B_TOBAC7.0e-4155.00Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1[more]
PR1A_TOBAC3.5e-4049.39Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1[more]
PR1A_SOLLC1.3e-3954.48Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1[more]
PR13_HORVU5.5e-3849.68Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1[more]
BLAST of Lsi03G006240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7N5_CUCSA1.0e-7883.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070232 PE=3 SV=1[more]
A0A0A0K4C1_CUCSA8.0e-5261.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070225 PE=3 SV=1[more]
A0A0A0K2C5_CUCSA2.6e-5059.35Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070230 PE=4 SV=1[more]
A0A0A0K6A0_CUCSA1.3e-4963.31Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070235 PE=3 SV=1[more]
A0A0A0K4C6_CUCSA5.4e-4856.36Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070250 PE=3 SV=1[more]
BLAST of Lsi03G006240 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33720.11.8e-4249.02 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT3G19690.19.7e-4148.00 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G19990.16.3e-4052.21 pathogenesis-related protein-1-like[more]
AT1G50060.11.8e-3950.71 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r... [more]
AT2G14580.15.3e-3944.94 basic pathogenesis-related protein 1[more]
BLAST of Lsi03G006240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110139|ref|XP_008455069.1|3.9e-8487.88PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
gi|778724756|ref|XP_004137080.2|1.4e-7883.63PREDICTED: pathogenesis-related protein 1A-like [Cucumis sativus][more]
gi|659110141|ref|XP_008455070.1|8.8e-5259.12PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
gi|449438289|ref|XP_004136921.1|1.1e-5161.25PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus][more]
gi|659110143|ref|XP_008455071.1|4.4e-5161.25PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR018244Allrgn_V5/Tpx1_CS
IPR014044CAP_domain
IPR002413V5_allergen
IPR001283Allrgn_V5/Tpx1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007010 cytoskeleton organization
cellular_component GO:0005576 extracellular region
cellular_component GO:0005575 cellular_component
cellular_component GO:0045298 tubulin complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0008017 microtubule binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G006240.1Lsi03G006240.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 50..68
score: 1.5E-18coord: 96..109
score: 1.5E-18coord: 148..161
score: 1.5E-18coord: 121..137
score: 1.5
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 1..165
score: 1.3
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 50..68
score: 4.6E-5coord: 120..139
score: 4.
IPR014044CAP domainGENE3DG3DSA:3.40.33.10coord: 28..165
score: 6.0
IPR014044CAP domainPFAMPF00188CAPcoord: 36..153
score: 3.0
IPR014044CAP domainSMARTSM00198SCP_3coord: 29..161
score: 1.5
IPR014044CAP domainunknownSSF55797PR-1-likecoord: 28..165
score: 1.7
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 148..159
scor
NoneNo IPR availablePANTHERPTHR10334:SF223F2J10.6 PROTEIN-RELATEDcoord: 1..165
score: 1.3