CmoCh04G004540 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G004540
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine-rich venom protein
Location	Cmo_Chr04 : 2257971 .. 2258402 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAAAACGCCCTCGGACTACCTCACACTTCACAACCGCATTCGAGTTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCATATGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGATTGTGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCACTGGGTTCTACCCTGAGTGCACTGGGGTGGATGCAGTGAAGCTGTGGGCGAATGAGAAGCCGCTGTATAATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGGTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAACCTTATGATTCTTCGGTGGTATGA

mRNA sequence

ATGCTCAAAACGCCCTCGGACTACCTCACACTTCACAACCGCATTCGAGTTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCATATGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGATTGTGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCACTGGGTTCTACCCTGAGTGCACTGGGGTGGATGCAGTGAAGCTGTGGGCGAATGAGAAGCCGCTGTATAATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGGTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAACCTTATGATTCTTCGGTGGTATGA

Coding sequence (CDS)

ATGCTCAAAACGCCCTCGGACTACCTCACACTTCACAACCGCATTCGAGTTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCATATGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGATTGTGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCACTGGGTTCTACCCTGAGTGCACTGGGGTGGATGCAGTGAAGCTGTGGGCGAATGAGAAGCCGCTGTATAATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGGTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAACCTTATGATTCTTCGGTGGTATGA

Homology

[Close]

BLAST of CmoCh04G004540 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-48
Identity = 83/135 (61.48%), Postives = 99/135 (73.33%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL  HN  R QVGVGPM W N +AAYAQ YA +R GDC MIHS GPYGEN+A  F 
Sbjct: 26  SPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAAAF- 85

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           P+     AVK+W +EK  Y++ SN CVGG CGHYTQ+VWR+SVRLGCARV       F+ 
Sbjct: 86  PQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFFIT 145

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDPPGN+IG++P+
Sbjct: 146 CNYDPPGNFIGQRPF 159

[Close]

BLAST of CmoCh04G004540 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.6e-44
Identity = 78/135 (57.78%), Postives = 98/135 (72.59%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL +HN+ R  VGVGPMQW   VAAYA++YAE+ +G+C +IHS GPYGEN+A G  
Sbjct: 29  SPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWG-S 88

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
            + +GV AV +W +EK  YN+A+N C  G CGHYTQ+VWR SVRLGCA+V        + 
Sbjct: 89  GDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIIS 148

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDP GNY+ EKPY
Sbjct: 149 CNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G004540 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.2e-42
Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 7   DYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPEC 66
           DY+  HN+ R Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPYGEN+A     + 
Sbjct: 32  DYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS-GGDL 91

Query: 67  TGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNY 126
           +GV AV LW NEK  YN+ +N C  G CGHYTQ+VWR+SVRLGCA+V        + CNY
Sbjct: 92  SGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNY 151

Query: 127 DPPGNYIGEKPY 139
           DPPGNY  +KPY
Sbjct: 152 DPPGNYANQKPY 161

[Close]

BLAST of CmoCh04G004540 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 76/136 (55.88%), Postives = 96/136 (70.59%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL +HN  R QVGVGPM W   +A+ AQ YA  R GDC +IHS    GEN+A G  
Sbjct: 27  SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGG- 86

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGE-CGHYTQMVWRSSVRLGCARVPYKGNSQFV 123
            + TG  AV+LW +E+P YN+A+N+CVGG+ CGHYTQ+VWR+SVRLGC R        F+
Sbjct: 87  GDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARCNNGWWFI 146

Query: 124 VCNYDPPGNYIGEKPY 139
            CNYDP GN++GE+PY
Sbjct: 147 SCNYDPVGNWVGERPY 159

[Close]

BLAST of CmoCh04G004540 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 3   KTPSD-YLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATG 62
           +TP + +L  HN  R +VGVGPM W + +AAYAQ YA +R  DC MIHS GPYGEN+A  
Sbjct: 22  QTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAAA 81

Query: 63  FYPECTGVDAVKLWANEKPLYNHASNKCVGGE-CGHYTQMVWRSSVRLGCARVPYKGNSQ 122
           F P+     AVK+W +EK  Y++ SN C  G+ CGHYTQ+VWR SVRLGCARV       
Sbjct: 82  F-PQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 141

Query: 123 FVVCNYDPPGNYI 134
           F+ CNYDPPGNYI
Sbjct: 142 FITCNYDPPGNYI 153

[Close]

BLAST of CmoCh04G004540 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-61
Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY++LHN+ R  VGVGPM W NTVAAYAQ+YA KRK DCA++HSTGPYGENIA GFY
Sbjct: 12  SPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTGPYGENIAIGFY 71

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARVP KG SQFVV
Sbjct: 72  PEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVPCKGKSQFVV 131

Query: 124 CNYDPPGNYIGEKPYDSSV 143
           CNYDPPGNYIG +PY+SS+
Sbjct: 132 CNYDPPGNYIGLRPYNSSM 150

[Close]

BLAST of CmoCh04G004540 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-59
Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 1


Query: 3   KTPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGF 62
           K+P DY++LHN+ R  V VGPM W+ TVAAYAQ+YA KRK DCA++HSTGPYGENIA G+
Sbjct: 19  KSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHSTGPYGENIAVGY 78

Query: 63  YPECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFV 122
           YPE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARV  KG SQFV
Sbjct: 79  YPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVACKGKSQFV 138

Query: 123 VCNYDPPGNYIGEKPYDSSV 143
           VCNYDPPGNYIG +PY+SS+
Sbjct: 139 VCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmoCh04G004540 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.0e-50
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY+  HN  R QVGVGPM W+NTVAAYAQ YA +R GDC ++HS GPYGENIA G  
Sbjct: 28  SPQDYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCNLVHSGGPYGENIAWGS- 87

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           P  TG DAV +W  EKP Y++ SN CVGG+CGHYTQ+VWR+SVRLGCARV       F+ 
Sbjct: 88  PSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSVRLGCARVQCNNGGWFIT 147

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDPPGNY+G++PY
Sbjct: 148 CNYDPPGNYVGQRPY 161

[Close]

BLAST of CmoCh04G004540 vs. TrEMBL
Match: E2GEV6_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.5e-49
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY+  HN  R QVGVGP+ W++TVAAYAQ YA +R GDC ++HS GPYGENIA G  
Sbjct: 28  SPQDYVDSHNAARAQVGVGPITWNDTVAAYAQNYANQRIGDCNLVHSGGPYGENIAWGS- 87

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           P  TG DAV +W  EKP Y++ SN CVGGECGHYTQ+VWR+SVRLGCARV       FV 
Sbjct: 88  PSLTGTDAVNMWVGEKPNYDYNSNSCVGGECGHYTQVVWRNSVRLGCARVQCDNGGWFVT 147

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDPPGNY+G++PY
Sbjct: 148 CNYDPPGNYVGQRPY 161

[Close]

BLAST of CmoCh04G004540 vs. TrEMBL
Match: E2GEV7_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.2e-49
Identity = 87/132 (65.91%), Postives = 101/132 (76.52%), Query Frame = 1


Query: 7   DYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPEC 66
           DY+  HN  R QVGVGPM W+NTVAAYAQ YA +R GDC+++HS GPYGENIA G  P  
Sbjct: 31  DYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCSLVHSGGPYGENIAWGS-PSL 90

Query: 67  TGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNY 126
           T  DAV +W  EKP Y++ SN CVGGECGHYTQ+VWR+SVRLGCARV       FV CNY
Sbjct: 91  TSTDAVNMWVGEKPNYDYNSNSCVGGECGHYTQVVWRNSVRLGCARVQCDNGGWFVTCNY 150

Query: 127 DPPGNYIGEKPY 139
           DPPGNY+G++PY
Sbjct: 151 DPPGNYVGQRPY 161

[Close]

BLAST of CmoCh04G004540 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 177.9 bits (450), Expect = 4.3e-45
Identity = 78/135 (57.78%), Postives = 98/135 (72.59%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL +HN+ R  VGVGPMQW   VAAYA++YAE+ +G+C +IHS GPYGEN+A G  
Sbjct: 29  SPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWG-S 88

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
            + +GV AV +W +EK  YN+A+N C  G CGHYTQ+VWR SVRLGCA+V        + 
Sbjct: 89  GDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIIS 148

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDP GNY+ EKPY
Sbjct: 149 CNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G004540 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 172.2 bits (435), Expect = 2.4e-43
Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 7   DYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPEC 66
           DY+  HN+ R Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPYGEN+A     + 
Sbjct: 32  DYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS-GGDL 91

Query: 67  TGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNY 126
           +GV AV LW NEK  YN+ +N C  G CGHYTQ+VWR+SVRLGCA+V        + CNY
Sbjct: 92  SGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNY 151

Query: 127 DPPGNYIGEKPY 139
           DPPGNY  +KPY
Sbjct: 152 DPPGNYANQKPY 161

[Close]

BLAST of CmoCh04G004540 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 5.3e-43
Identity = 76/136 (55.88%), Postives = 97/136 (71.32%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P D+L +HNR R +VGVGP++W   VAAYA+ YA +RKGDCAM HS+G YGENIA    
Sbjct: 29  SPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWS-S 88

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCV-GGECGHYTQMVWRSSVRLGCARVPYKGNSQFV 123
              TGV AV +W +E+  Y++ SN C    +CGHYTQ+VWR+S RLGCA+V       F+
Sbjct: 89  GSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTFI 148

Query: 124 VCNYDPPGNYIGEKPY 139
            CNYDPPGN++GE PY
Sbjct: 149 TCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh04G004540 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-42
Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           TP DYL  HN  R QVGV  + W  T+AAYA  Y+  RK DC ++HS GPYGEN+A G  
Sbjct: 26  TPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKGSS 85

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGG-ECGHYTQMVWRSSVRLGCARVPYKGNSQFV 123
              + + AVKLW +EKP Y++A N C GG +C HYTQ+VWR SV++GCARV       FV
Sbjct: 86  SSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARVQCTNTWWFV 145

Query: 124 VCNYDPPGNYIGEKPY 139
            CNY+ PGN++GE PY
Sbjct: 146 SCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh04G004540 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-41
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 1


Query: 5   PSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYP 64
           P + L +HN+ R  VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP+GEN+A G + 
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAG-WG 101

Query: 65  ECTGVDAVKLWANEKPLYNHASNKCVG-GECGHYTQMVWRSSVRLGCARVPYKGNSQ-FV 124
             +G  A + W  EK  Y++ SN C G G CGHYTQ+VWR SVRLGCA V  K +   +V
Sbjct: 102 TMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 125 VCNYDPPGNYIGEKPY 139
           +C+YDPPGNYIG++PY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

[Close]

BLAST of CmoCh04G004540 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61
Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY++LHN+ R  VGVGPM W NTVAAYAQ+YA KRK DCA++HSTGPYGENIA GFY
Sbjct: 20  SPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTGPYGENIAIGFY 79

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARVP KG SQFVV
Sbjct: 80  PEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVPCKGKSQFVV 139

Query: 124 CNYDPPGNYIGEKPYDSSV 143
           CNYDPPGNYIG +PY+SS+
Sbjct: 140 CNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmoCh04G004540 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61
Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY++LHN+ R  VGVGPM W NTVAAYAQ+YA KRK DCA++HSTGPYGENIA GFY
Sbjct: 12  SPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTGPYGENIAIGFY 71

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARVP KG SQFVV
Sbjct: 72  PEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVPCKGKSQFVV 131

Query: 124 CNYDPPGNYIGEKPYDSSV 143
           CNYDPPGNYIG +PY+SS+
Sbjct: 132 CNYDPPGNYIGLRPYNSSM 150

[Close]

BLAST of CmoCh04G004540 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 4.9e-59
Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 1


Query: 3   KTPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGF 62
           K+P DY++LHN+ R  V VGPM W+ TVAAYAQ+YA KRK DCA++HSTGPYGENIA G+
Sbjct: 19  KSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHSTGPYGENIAVGY 78

Query: 63  YPECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFV 122
           YPE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARV  KG SQFV
Sbjct: 79  YPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVACKGKSQFV 138

Query: 123 VCNYDPPGNYIGEKPYDSSV 143
           VCNYDPPGNYIG +PY+SS+
Sbjct: 139 VCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmoCh04G004540 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 4.6e-57
Identity = 97/138 (70.29%), Postives = 115/138 (83.33%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY+ LHN+ R  VGVGPM W++T+AAYA+AYA +R  DCA++HS GPYGENIA G+Y
Sbjct: 20  SPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKDCALVHSKGPYGENIAVGYY 79

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SVRLGCARV  KG SQFVV
Sbjct: 80  PEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVWRTSVRLGCARVACKGKSQFVV 139

Query: 124 CNYDPPGNYIGEKPYDSS 142
           CNYDPPGNYIG +PY+SS
Sbjct: 140 CNYDPPGNYIGLRPYNSS 157

[Close]

BLAST of CmoCh04G004540 vs. NCBI nr
Match: gi|778674388|ref|XP_004138862.2| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 4.9e-51
Identity = 89/119 (74.79%), Postives = 102/119 (85.71%), Query Frame = 1


Query: 24  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPECTGVDAVKLWANEKPLYN 83
           M W+NTVAAYAQ+YA KRK DCA+IHSTGPYGENIA G+YPE TG D VK+W  EK LY+
Sbjct: 1   MTWNNTVAAYAQSYANKRKNDCALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYD 60

Query: 84  HASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNYDPPGNYIGEKPYDSSV 143
           +ASN C GG+CGHYTQ+VWR+SV LGCARV  KG SQFVVCNYDPPGNYIG +PY+SS+
Sbjct: 61  YASNSCKGGDCGHYTQVVWRTSVHLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNSSM 119

The following BLAST results are available for this feature:

BLAST of CmoCh04G004540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	3.9e-48	61.48	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	7.6e-44	57.78	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	4.2e-42	56.82	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR04_SOLLC	3.9e-40	55.88	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1A_SOLLC	3.9e-40	57.14	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of CmoCh04G004540 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHP4_CUCSA	2.8e-61	74.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	3.4e-59	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
E2GEV9_9ROSI	5.0e-50	64.44	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
E2GEV6_9ROSI	2.5e-49	64.44	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
E2GEV7_9ROSI	4.2e-49	65.91	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of CmoCh04G004540 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	4.3e-45	57.78	pathogenesis-related gene 1	[more]
AT2G14580.1	2.4e-43	56.82	basic pathogenesis-related protein 1	[more]
AT4G33720.1	5.3e-43	55.88	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	1.5e-42	54.41	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19990.1	2.9e-41	55.15	pathogenesis-related protein-1-like	[more]

BLAST of CmoCh04G004540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722387\|ref\|XP_011658476.1\|	4.0e-61	74.10	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	4.0e-61	74.10	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|700207817\|gb\|KGN62936.1\|	4.9e-59	71.43	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	4.6e-57	70.29	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|778674388\|ref\|XP_004138862.2\|	4.9e-51	74.79	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR002413	V5_allergen
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G004540.1	CmoCh04G004540.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 24..42 score: 1.2E-19coord: 71..84 score: 1.2E-19coord: 94..110 score: 1.2E-19coord: 121..134 score: 1.2
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 4..143 score: 5.1
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 24..42 score: 3.0E-7coord: 93..112 score: 3.0E-7coord: 69..84 score: 3.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 6..142 score: 1.3
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 9..126 score: 1.2
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 3..134 score: 2.1
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 6..140 score: 1.96
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 95..105 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 121..132 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 4..143 score: 5.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G004540	Lsi03G006240	Bottle gourd (USVL1VR-Ls)	cmolsiB650
CmoCh04G004540	Cp4.1LG01g02850	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G004540	MELO3C018539.2	Melon (DHL92) v3.6.1	cmomedB751

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G004540	Wild cucumber (PI 183967)	cmocpiB777
CmoCh04G004540	Cucumber (Chinese Long) v2	cmocuB766
CmoCh04G004540	Cucumber (Chinese Long) v2	cmocuB769
CmoCh04G004540	Melon (DHL92) v3.5.1	cmomeB665
CmoCh04G004540	Melon (DHL92) v3.5.1	cmomeB689
CmoCh04G004540	Melon (DHL92) v3.5.1	cmomeB692
CmoCh04G004540	Melon (DHL92) v3.5.1	cmomeB703
CmoCh04G004540	Watermelon (Charleston Gray)	cmowcgB610
CmoCh04G004540	Watermelon (Charleston Gray)	cmowcgB645
CmoCh04G004540	Watermelon (97103) v1	cmowmB648
CmoCh04G004540	Watermelon (97103) v1	cmowmB721
CmoCh04G004540	Cucurbita pepo (Zucchini)	cmocpeB668
CmoCh04G004540	Cucurbita pepo (Zucchini)	cmocpeB672
CmoCh04G004540	Cucurbita pepo (Zucchini)	cmocpeB703
CmoCh04G004540	Bottle gourd (USVL1VR-Ls)	cmolsiB627
CmoCh04G004540	Bottle gourd (USVL1VR-Ls)	cmolsiB646
CmoCh04G004540	Cucumber (Gy14) v2	cgybcmoB822
CmoCh04G004540	Cucumber (Gy14) v2	cgybcmoB948
CmoCh04G004540	Melon (DHL92) v3.6.1	cmomedB782
CmoCh04G004540	Melon (DHL92) v3.6.1	cmomedB786
CmoCh04G004540	Melon (DHL92) v3.6.1	cmomedB800
CmoCh04G004540	Silver-seed gourd	carcmoB0403
CmoCh04G004540	Silver-seed gourd	carcmoB0514
CmoCh04G004540	Silver-seed gourd	carcmoB0616
CmoCh04G004540	Silver-seed gourd	carcmoB0999
CmoCh04G004540	Cucumber (Chinese Long) v3	cmocucB0905
CmoCh04G004540	Cucumber (Chinese Long) v3	cmocucB0910
CmoCh04G004540	Watermelon (97103) v2	cmowmbB684
CmoCh04G004540	Watermelon (97103) v2	cmowmbB696
CmoCh04G004540	Watermelon (97103) v2	cmowmbB717
CmoCh04G004540	Wax gourd	cmowgoB0810
CmoCh04G004540	Cucurbita moschata (Rifu)	cmocmoB125
CmoCh04G004540	Cucurbita moschata (Rifu)	cmocmoB286
CmoCh04G004540	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh04G004540	Cucurbita moschata (Rifu)	cmocmoB477
CmoCh04G004540	Cucumber (Gy14) v1	cgycmoB0228
CmoCh04G004540	Cucumber (Gy14) v1	cgycmoB0632
CmoCh04G004540	Cucurbita maxima (Rimu)	cmacmoB156
CmoCh04G004540	Cucurbita maxima (Rimu)	cmacmoB338
CmoCh04G004540	Cucurbita maxima (Rimu)	cmacmoB530
CmoCh04G004540	Cucurbita maxima (Rimu)	cmacmoB728