CmoCh04G004540.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G004540.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine-rich venom protein
Location	Cmo_Chr04 : 2257971 .. 2258402 (+)
Sequence length	432

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAAAACGCCCTCGGACTACCTCACACTTCACAACCGCATTCGAGTTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCATATGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGATTGTGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCACTGGGTTCTACCCTGAGTGCACTGGGGTGGATGCAGTGAAGCTGTGGGCGAATGAGAAGCCGCTGTATAATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGGTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAACCTTATGATTCTTCGGTGGTATGA

mRNA sequence

ATGCTCAAAACGCCCTCGGACTACCTCACACTTCACAACCGCATTCGAGTTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCATATGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGATTGTGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCACTGGGTTCTACCCTGAGTGCACTGGGGTGGATGCAGTGAAGCTGTGGGCGAATGAGAAGCCGCTGTATAATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGGTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAACCTTATGATTCTTCGGTGGTATGA

Coding sequence (CDS)

ATGCTCAAAACGCCCTCGGACTACCTCACACTTCACAACCGCATTCGAGTTCAGGTCGGCGTCGGCCCCATGCAATGGAGCAACACCGTGGCTGCATATGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGATTGTGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCACTGGGTTCTACCCTGAGTGCACTGGGGTGGATGCAGTGAAGCTGTGGGCGAATGAGAAGCCGCTGTATAATCATGCGTCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGAAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCCTATAAGGGTAATTCTCAGTTTGTTGTTTGCAATTACGATCCTCCTGGCAACTATATTGGGGAAAAACCTTATGATTCTTCGGTGGTATGA

Homology

[Close]

BLAST of CmoCh04G004540.1 vs. Swiss-Prot
Match: PRB1_TOBAC (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.9e-48
Identity = 83/135 (61.48%), Postives = 99/135 (73.33%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL  HN  R QVGVGPM W N +AAYAQ YA +R GDC MIHS GPYGEN+A  F 
Sbjct: 26  SPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPYGENLAAAF- 85

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           P+     AVK+W +EK  Y++ SN CVGG CGHYTQ+VWR+SVRLGCARV       F+ 
Sbjct: 86  PQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRSNNGWFFIT 145

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDPPGN+IG++P+
Sbjct: 146 CNYDPPGNFIGQRPF 159

[Close]

BLAST of CmoCh04G004540.1 vs. Swiss-Prot
Match: PR1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 7.6e-44
Identity = 78/135 (57.78%), Postives = 98/135 (72.59%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL +HN+ R  VGVGPMQW   VAAYA++YAE+ +G+C +IHS GPYGEN+A G  
Sbjct: 29  SPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWG-S 88

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
            + +GV AV +W +EK  YN+A+N C  G CGHYTQ+VWR SVRLGCA+V        + 
Sbjct: 89  GDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIIS 148

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDP GNY+ EKPY
Sbjct: 149 CNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. Swiss-Prot
Match: PRB1_ARATH (Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 4.2e-42
Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 7   DYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPEC 66
           DY+  HN+ R Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPYGEN+A     + 
Sbjct: 32  DYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS-GGDL 91

Query: 67  TGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNY 126
           +GV AV LW NEK  YN+ +N C  G CGHYTQ+VWR+SVRLGCA+V        + CNY
Sbjct: 92  SGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNY 151

Query: 127 DPPGNYIGEKPY 139
           DPPGNY  +KPY
Sbjct: 152 DPPGNYANQKPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. Swiss-Prot
Match: PR04_SOLLC (Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 76/136 (55.88%), Postives = 96/136 (70.59%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL +HN  R QVGVGPM W   +A+ AQ YA  R GDC +IHS    GEN+A G  
Sbjct: 27  SPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGG- 86

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGE-CGHYTQMVWRSSVRLGCARVPYKGNSQFV 123
            + TG  AV+LW +E+P YN+A+N+CVGG+ CGHYTQ+VWR+SVRLGC R        F+
Sbjct: 87  GDFTGRAAVQLWVSERPDYNYATNQCVGGKMCGHYTQVVWRNSVRLGCGRARCNNGWWFI 146

Query: 124 VCNYDPPGNYIGEKPY 139
            CNYDP GN++GE+PY
Sbjct: 147 SCNYDPVGNWVGERPY 159

[Close]

BLAST of CmoCh04G004540.1 vs. Swiss-Prot
Match: PR1A_SOLLC (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.9e-40
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 3   KTPSD-YLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATG 62
           +TP + +L  HN  R +VGVGPM W + +AAYAQ YA +R  DC MIHS GPYGEN+A  
Sbjct: 22  QTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAAA 81

Query: 63  FYPECTGVDAVKLWANEKPLYNHASNKCVGGE-CGHYTQMVWRSSVRLGCARVPYKGNSQ 122
           F P+     AVK+W +EK  Y++ SN C  G+ CGHYTQ+VWR SVRLGCARV       
Sbjct: 82  F-PQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWV 141

Query: 123 FVVCNYDPPGNYI 134
           F+ CNYDPPGNYI
Sbjct: 142 FITCNYDPPGNYI 153

[Close]

BLAST of CmoCh04G004540.1 vs. TrEMBL
Match: A0A0A0KHP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-61
Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY++LHN+ R  VGVGPM W NTVAAYAQ+YA KRK DCA++HSTGPYGENIA GFY
Sbjct: 12  SPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTGPYGENIAIGFY 71

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARVP KG SQFVV
Sbjct: 72  PEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVPCKGKSQFVV 131

Query: 124 CNYDPPGNYIGEKPYDSSV 143
           CNYDPPGNYIG +PY+SS+
Sbjct: 132 CNYDPPGNYIGLRPYNSSM 150

[Close]

BLAST of CmoCh04G004540.1 vs. TrEMBL
Match: A0A0A0LSG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-59
Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 1


Query: 3   KTPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGF 62
           K+P DY++LHN+ R  V VGPM W+ TVAAYAQ+YA KRK DCA++HSTGPYGENIA G+
Sbjct: 19  KSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHSTGPYGENIAVGY 78

Query: 63  YPECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFV 122
           YPE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARV  KG SQFV
Sbjct: 79  YPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVACKGKSQFV 138

Query: 123 VCNYDPPGNYIGEKPYDSSV 143
           VCNYDPPGNYIG +PY+SS+
Sbjct: 139 VCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmoCh04G004540.1 vs. TrEMBL
Match: E2GEV9_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.0e-50
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY+  HN  R QVGVGPM W+NTVAAYAQ YA +R GDC ++HS GPYGENIA G  
Sbjct: 28  SPQDYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCNLVHSGGPYGENIAWGS- 87

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           P  TG DAV +W  EKP Y++ SN CVGG+CGHYTQ+VWR+SVRLGCARV       F+ 
Sbjct: 88  PSLTGTDAVNMWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSVRLGCARVQCNNGGWFIT 147

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDPPGNY+G++PY
Sbjct: 148 CNYDPPGNYVGQRPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. TrEMBL
Match: E2GEV6_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.5e-49
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY+  HN  R QVGVGP+ W++TVAAYAQ YA +R GDC ++HS GPYGENIA G  
Sbjct: 28  SPQDYVDSHNAARAQVGVGPITWNDTVAAYAQNYANQRIGDCNLVHSGGPYGENIAWGS- 87

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           P  TG DAV +W  EKP Y++ SN CVGGECGHYTQ+VWR+SVRLGCARV       FV 
Sbjct: 88  PSLTGTDAVNMWVGEKPNYDYNSNSCVGGECGHYTQVVWRNSVRLGCARVQCDNGGWFVT 147

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDPPGNY+G++PY
Sbjct: 148 CNYDPPGNYVGQRPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. TrEMBL
Match: E2GEV7_9ROSI (Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.2e-49
Identity = 87/132 (65.91%), Postives = 101/132 (76.52%), Query Frame = 1


Query: 7   DYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPEC 66
           DY+  HN  R QVGVGPM W+NTVAAYAQ YA +R GDC+++HS GPYGENIA G  P  
Sbjct: 31  DYVDAHNAARAQVGVGPMTWNNTVAAYAQNYANQRIGDCSLVHSGGPYGENIAWGS-PSL 90

Query: 67  TGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNY 126
           T  DAV +W  EKP Y++ SN CVGGECGHYTQ+VWR+SVRLGCARV       FV CNY
Sbjct: 91  TSTDAVNMWVGEKPNYDYNSNSCVGGECGHYTQVVWRNSVRLGCARVQCDNGGWFVTCNY 150

Query: 127 DPPGNYIGEKPY 139
           DPPGNY+G++PY
Sbjct: 151 DPPGNYVGQRPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. TAIR10
Match: AT2G14610.1 (AT2G14610.1 pathogenesis-related gene 1)

HSP 1 Score: 177.9 bits (450), Expect = 4.3e-45
Identity = 78/135 (57.78%), Postives = 98/135 (72.59%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DYL +HN+ R  VGVGPMQW   VAAYA++YAE+ +G+C +IHS GPYGEN+A G  
Sbjct: 29  SPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENLAWG-S 88

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
            + +GV AV +W +EK  YN+A+N C  G CGHYTQ+VWR SVRLGCA+V        + 
Sbjct: 89  GDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVWRKSVRLGCAKVRCNNGGTIIS 148

Query: 124 CNYDPPGNYIGEKPY 139
           CNYDP GNY+ EKPY
Sbjct: 149 CNYDPRGNYVNEKPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. TAIR10
Match: AT2G14580.1 (AT2G14580.1 basic pathogenesis-related protein 1)

HSP 1 Score: 172.2 bits (435), Expect = 2.4e-43
Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 1


Query: 7   DYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPEC 66
           DY+  HN+ R Q+GVGPMQW   +AAYA+ YA + KGDC ++HS GPYGEN+A     + 
Sbjct: 32  DYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQLKGDCRLVHSRGPYGENLAKS-GGDL 91

Query: 67  TGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNY 126
           +GV AV LW NEK  YN+ +N C  G CGHYTQ+VWR+SVRLGCA+V        + CNY
Sbjct: 92  SGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVWRNSVRLGCAKVRCNNGGTIISCNY 151

Query: 127 DPPGNYIGEKPY 139
           DPPGNY  +KPY
Sbjct: 152 DPPGNYANQKPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. TAIR10
Match: AT4G33720.1 (AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 5.3e-43
Identity = 76/136 (55.88%), Postives = 97/136 (71.32%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P D+L +HNR R +VGVGP++W   VAAYA+ YA +RKGDCAM HS+G YGENIA    
Sbjct: 29  SPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSGSYGENIAWS-S 88

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCV-GGECGHYTQMVWRSSVRLGCARVPYKGNSQFV 123
              TGV AV +W +E+  Y++ SN C    +CGHYTQ+VWR+S RLGCA+V       F+
Sbjct: 89  GSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAKVRCNNGQTFI 148

Query: 124 VCNYDPPGNYIGEKPY 139
            CNYDPPGN++GE PY
Sbjct: 149 TCNYDPPGNWVGEWPY 163

[Close]

BLAST of CmoCh04G004540.1 vs. TAIR10
Match: AT1G50060.1 (AT1G50060.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-42
Identity = 74/136 (54.41%), Postives = 92/136 (67.65%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           TP DYL  HN  R QVGV  + W  T+AAYA  Y+  RK DC ++HS GPYGEN+A G  
Sbjct: 26  TPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKGSS 85

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGG-ECGHYTQMVWRSSVRLGCARVPYKGNSQFV 123
              + + AVKLW +EKP Y++A N C GG +C HYTQ+VWR SV++GCARV       FV
Sbjct: 86  SSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGCARVQCTNTWWFV 145

Query: 124 VCNYDPPGNYIGEKPY 139
            CNY+ PGN++GE PY
Sbjct: 146 SCNYNSPGNWVGEYPY 161

[Close]

BLAST of CmoCh04G004540.1 vs. TAIR10
Match: AT2G19990.1 (AT2G19990.1 pathogenesis-related protein-1-like)

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-41
Identity = 75/136 (55.15%), Postives = 96/136 (70.59%), Query Frame = 1


Query: 5   PSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYP 64
           P + L +HN+ R  VGVGPM W+ T+A YAQ+YA +R  DCAM HS GP+GEN+A G + 
Sbjct: 42  PQETLVVHNKARAMVGVGPMVWNETLATYAQSYAHERARDCAMKHSLGPFGENLAAG-WG 101

Query: 65  ECTGVDAVKLWANEKPLYNHASNKCVG-GECGHYTQMVWRSSVRLGCARVPYKGNSQ-FV 124
             +G  A + W  EK  Y++ SN C G G CGHYTQ+VWR SVRLGCA V  K +   +V
Sbjct: 102 TMSGPVATEYWMTEKENYDYDSNTCGGDGVCGHYTQIVWRDSVRLGCASVRCKNDEYIWV 161

Query: 125 VCNYDPPGNYIGEKPY 139
           +C+YDPPGNYIG++PY
Sbjct: 162 ICSYDPPGNYIGQRPY 176

[Close]

BLAST of CmoCh04G004540.1 vs. NCBI nr
Match: gi|778722387|ref|XP_011658476.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61
Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY++LHN+ R  VGVGPM W NTVAAYAQ+YA KRK DCA++HSTGPYGENIA GFY
Sbjct: 20  SPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTGPYGENIAIGFY 79

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARVP KG SQFVV
Sbjct: 80  PEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVPCKGKSQFVV 139

Query: 124 CNYDPPGNYIGEKPYDSSV 143
           CNYDPPGNYIG +PY+SS+
Sbjct: 140 CNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmoCh04G004540.1 vs. NCBI nr
Match: gi|700193135|gb|KGN48339.1| (hypothetical protein Csa_6G483242 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 4.0e-61
Identity = 103/139 (74.10%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY++LHN+ R  VGVGPM W NTVAAYAQ+YA KRK DCA++HSTGPYGENIA GFY
Sbjct: 12  SPQDYISLHNKARAAVGVGPMTWDNTVAAYAQSYANKRKNDCALVHSTGPYGENIAIGFY 71

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARVP KG SQFVV
Sbjct: 72  PEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVPCKGKSQFVV 131

Query: 124 CNYDPPGNYIGEKPYDSSV 143
           CNYDPPGNYIG +PY+SS+
Sbjct: 132 CNYDPPGNYIGLRPYNSSM 150

[Close]

BLAST of CmoCh04G004540.1 vs. NCBI nr
Match: gi|700207817|gb|KGN62936.1| (hypothetical protein Csa_2G381380 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 4.9e-59
Identity = 100/140 (71.43%), Postives = 117/140 (83.57%), Query Frame = 1


Query: 3   KTPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGF 62
           K+P DY++LHN+ R  V VGPM W+ TVAAYAQ+YA KRK DCA++HSTGPYGENIA G+
Sbjct: 19  KSPQDYISLHNKARAAVRVGPMTWNKTVAAYAQSYANKRKNDCALVHSTGPYGENIAVGY 78

Query: 63  YPECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFV 122
           YPE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SV LGCARV  KG SQFV
Sbjct: 79  YPEFTGADGVKLWVGEKHLYDYASNSCKGGDCGHYTQVVWRTSVHLGCARVACKGKSQFV 138

Query: 123 VCNYDPPGNYIGEKPYDSSV 143
           VCNYDPPGNYIG +PY+SS+
Sbjct: 139 VCNYDPPGNYIGLRPYNSSM 158

[Close]

BLAST of CmoCh04G004540.1 vs. NCBI nr
Match: gi|659109009|ref|XP_008454501.1| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 4.6e-57
Identity = 97/138 (70.29%), Postives = 115/138 (83.33%), Query Frame = 1


Query: 4   TPSDYLTLHNRIRVQVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFY 63
           +P DY+ LHN+ R  VGVGPM W++T+AAYA+AYA +R  DCA++HS GPYGENIA G+Y
Sbjct: 20  SPQDYIALHNKARAAVGVGPMTWNSTLAAYAEAYANQRIKDCALVHSKGPYGENIAVGYY 79

Query: 64  PECTGVDAVKLWANEKPLYNHASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVV 123
           PE TG D VKLW  EK LY++ASN C GG+CGHYTQ+VWR+SVRLGCARV  KG SQFVV
Sbjct: 80  PEFTGADGVKLWVAEKRLYDYASNSCKGGDCGHYTQLVWRTSVRLGCARVACKGKSQFVV 139

Query: 124 CNYDPPGNYIGEKPYDSS 142
           CNYDPPGNYIG +PY+SS
Sbjct: 140 CNYDPPGNYIGLRPYNSS 157

[Close]

BLAST of CmoCh04G004540.1 vs. NCBI nr
Match: gi|778674388|ref|XP_004138862.2| (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus])

HSP 1 Score: 209.1 bits (531), Expect = 4.9e-51
Identity = 89/119 (74.79%), Postives = 102/119 (85.71%), Query Frame = 1


Query: 24  MQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIATGFYPECTGVDAVKLWANEKPLYN 83
           M W+NTVAAYAQ+YA KRK DCA+IHSTGPYGENIA G+YPE TG D VK+W  EK LY+
Sbjct: 1   MTWNNTVAAYAQSYANKRKNDCALIHSTGPYGENIAVGYYPEFTGADGVKMWVGEKHLYD 60

Query: 84  HASNKCVGGECGHYTQMVWRSSVRLGCARVPYKGNSQFVVCNYDPPGNYIGEKPYDSSV 143
           +ASN C GG+CGHYTQ+VWR+SV LGCARV  KG SQFVVCNYDPPGNYIG +PY+SS+
Sbjct: 61  YASNSCKGGDCGHYTQVVWRTSVHLGCARVACKGKSQFVVCNYDPPGNYIGLRPYNSSM 119

The following BLAST results are available for this feature:

BLAST of CmoCh04G004540.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRB1_TOBAC	3.9e-48	61.48	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum PE=3 SV=1	[more]
PR1_ARATH	7.6e-44	57.78	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1	[more]
PRB1_ARATH	4.2e-42	56.82	Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=PRB1 PE=2 SV=1	[more]
PR04_SOLLC	3.9e-40	55.88	Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum PE=2 SV=1	[more]
PR1A_SOLLC	3.9e-40	57.14	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum PE=2 SV=1	[more]

BLAST of CmoCh04G004540.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHP4_CUCSA	2.8e-61	74.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483242 PE=3 SV=1	[more]
A0A0A0LSG5_CUCSA	3.4e-59	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G381380 PE=3 SV=1	[more]
E2GEV9_9ROSI	5.0e-50	64.44	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
E2GEV6_9ROSI	2.5e-49	64.44	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]
E2GEV7_9ROSI	4.2e-49	65.91	Pathogenesis-related protein 1 OS=Vitis hybrid cultivar GN=PR-1 PE=3 SV=1	[more]

BLAST of CmoCh04G004540.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G14610.1	4.3e-45	57.78	pathogenesis-related gene 1	[more]
AT2G14580.1	2.4e-43	56.82	basic pathogenesis-related protein 1	[more]
AT4G33720.1	5.3e-43	55.88	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT1G50060.1	1.5e-42	54.41	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-r...	[more]
AT2G19990.1	2.9e-41	55.15	pathogenesis-related protein-1-like	[more]

BLAST of CmoCh04G004540.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778722387\|ref\|XP_011658476.1\|	4.0e-61	74.10	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]
gi\|700193135\|gb\|KGN48339.1\|	4.0e-61	74.10	hypothetical protein Csa_6G483242 [Cucumis sativus]	[more]
gi\|700207817\|gb\|KGN62936.1\|	4.9e-59	71.43	hypothetical protein Csa_2G381380 [Cucumis sativus]	[more]
gi\|659109009\|ref\|XP_008454501.1\|	4.6e-57	70.29	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo]	[more]
gi\|778674388\|ref\|XP_004138862.2\|	4.9e-51	74.79	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001283	Allrgn_V5/Tpx1
IPR002413	V5_allergen
IPR014044	CAP_domain
IPR018244	Allrgn_V5/Tpx1_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh04G004540	CmoCh04G004540	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh04G004540.1	CmoCh04G004540.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G004540.1.exon.1	CmoCh04G004540.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh04G004540.1.CDS.1	CmoCh04G004540.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PRINTS	PR00837	V5TPXLIKE	coord: 24..42 score: 1.2E-19coord: 71..84 score: 1.2E-19coord: 94..110 score: 1.2E-19coord: 121..134 score: 1.2
IPR001283	Cysteine-rich secretory protein, allergen V5/Tpx-1-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 4..143 score: 5.1
IPR002413	Ves allergen	PRINTS	PR00838	V5ALLERGEN	coord: 24..42 score: 3.0E-7coord: 93..112 score: 3.0E-7coord: 69..84 score: 3.
IPR014044	CAP domain	GENE3D	G3DSA:3.40.33.10		coord: 6..142 score: 1.3
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 9..126 score: 1.2
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 3..134 score: 2.1
IPR014044	CAP domain	unknown	SSF55797	PR-1-like	coord: 6..140 score: 1.96
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 95..105 scor
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 121..132 scor
None	No IPR available	PANTHER	PTHR10334:SF223	F2J10.6 PROTEIN-RELATED	coord: 4..143 score: 5.1