Lsi03G004950 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCACCACCCTCCTCCTTGGACCCTCCTCAACTCCGGCAGCGACGTCGACGATGACGACGACGACAACAACGACAACTACAATGACATCAAATTCCCCATCAACAACACCCACCTTCTCCCTCCTCCCCCGACGCAGGTGGGGAAGAAGAGAGAGGCAACCGAGGGAAAATCGGGTGGCGCTACCGAGTCGTCGGATCACGACATTCATATTTGGACGGAGAGAGAACGGCGGAAGAAAATGAGAAATATGTTCTCTAATCTTCATGCCTTGCTTCCTCACCTTCCTCCTAAGGTACCTTCACATTATACAAAAATTGTATCACTTTTTATTTAATTATTATTATTATCTATTTCACAATTACTTCTTCTTTAAAAAGTTAAAAATTTTCATACTCTCAATTTATATATATATATATATTTAAAAAAAAATGAAAAAACCCTATTAAGAGATTTAATTTTGGGTTATTTTTAAATATAGAAAAATGAGTCAAACTATTTACAAATATAGAGAAATTTAATTGTTTATCAACGGTAGATCGCGATAGAACGCTGGTAGATCACGATAAAATTCTATTGCTAATAGATAGTAAAATTTCTTCTATATTTATAAATAATTTGATATTTTTTCTGTTTACATTAATTTCCTTTTAATTTTCTTTGTTGTTCATAAAAACAAGTTTTCTTTTCAACGTAGTATAAGGAACCATAAAATTAAAAGCTGCAAAAAGTGGCATTATCCTATGTGTGTCTTGGATTTTAATCATATGGGATTCTTTATTAATGTATTCATAACTTCTTTTTTTTTTGAGGGAATGTCATGCCTTTTAATAATAATAATGGAGAGGAAAGATTTTTATGACATGTTTTTAATGTAAAAAGAGTAAAAGGGACATGTTTTTTTTGGTATATATTTTAGGGAGATTTTTAAAAATAAAAAAAATAAGGGAAACTATTTACACAAAATAGCAAAATTTTTATATAGTTGTGATAGATGCTGATAGAAGTATATCAGAGTCTATCAATGATAGAAATGAGAGAAGTCTATCGCTGATAGATGCTGATAGAAGTCTATCAATGTCTATCAATATTTTTTTTGTTATTTTCTGTAAATAGTTTGACAACTTTTCTATTTGTAAAAATTTTCTTATATTTTAGATAGAAAATGAAATAAATAAATTATTGATGAATGACCCTCATTTTTAAAAGAGAAAAAAGAAAAAAGAAAAAAAAGAAAAATCTTATTTTTGTTTACAGAGGAGCATATTTAGAAATTAGTTGTCATGCATGAGTTCAATTGAAACAATTTAGGGTCTTTTTAATTAAAAAAAACTAAGAAAATAATTTAGGTTTATTTTCTTTTTTTTTTTGTTTTGGGTGTGTGTTCTTTAATATATTATTATTATTTACTAATTCTCCTTTTTAAAACTATAGAGAAATAAATAGCTTTCACTCACCCTTTTGATCTTCTTAGATTAGGATATTGACTATTATTGAAATTATTTTTCTAAAAAATTAAAGGTAAATTTAAGAAAAAAAATTGAAATAAAACTAGGGGATAAGTGCGTGTATTATGTCTTATAATATATATTATGTAAATTAATATTGATGATTGGAATGAGTACATGAAACAAATAATATTTGTTTGGTAACTATTTAGTTTTTAATTTTTTATTTTTGAAAATTAAGTCTATTTACTCTCAATTTCTTACAATGATTTGTATTTTACTACTTAACCAAATTTCAAATTTTAAAAACTAGTTTTTTTTTCTTTATTTTTTAAAACATTGGTAAGAAGAAGATAACAAAGCAAGAAATTTATAGGTGAAAGTAGTAATTAAAGGCTTAATTTTCAAAAATTAAAATAAAAAAAATGAAATGATATTATAAAACAGGACCTAAGATTATTCTTTTTAATCCTTGTACTTTAAAAAAATTTAAGAAAATGATAATAAATATTTTTTTTTGAAAAATCAACAACTATTATGACTATTTTTTAGATTTATTAAAAGTAAATTAAATTTAAACATTTAAATGTATAAAAATTAAAATGAATTGAAATTGAAATTACACACCTATTAAAATAATATGTATTCTAACCAGATATATGATGTAGTTAAAACCTCAAATCATAGTCAAACCTTAAATATAATAAAATAGCTTTCCTTAAAACTTAGTCTATGAACTCCGATCCCAATTTTGCATCTCTTTTAACTATCTTTTTTCTTTTTAAAGGATTATAGGCTTATCAGAGAAAAAAATTACTGAATAAGACTCTGATCTTTCAATTGTATTTCTAATAAATCGGTAAATTAAAAAAAAAAAAAAAAAAGTGATATAGGTACATACGAACCCTAAGTAGACATAATAGATGCATACATATATTTATTTATATACAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTGTTAAATAATACAAAAGATCTATAACTTTGTAATTTGTGTCAAAAAACTCTTGAACTTTTAAAAGTTTCAAAAATATCCTTAAACTTCTAAAATGAGTTTAAAAAATACTCTTACGGTTAGTTTTGGATGGAAACTATTAGTGTTTTGGTTAAAAAAATACACATGAACTTTCAAAAGTTTAAAGAATACCCTTAAACTTAAAAAGAAATTCAAAAATATTTTTATGGTTATATGAACAAAAACCGTTAATACCATCTTTCTTCCCTTTTTTTCCTCTCCCCTTCAATATCTTCGCTCCCCTTCTTGTTAACTATTTGATGACATTTGTTTATCACAATAAATAATTAATAAAATTGCACACGTCAGCCAAGCTATATATACTATAATAAGACGAAGAAAGAGACTAATAGAAGCACCAAAGTAATTTTAGGAATTAAATATTTTTACAAAGTTGTAAGTTAATTGTTGAGTATGTGTTAATAGCTAAATACTTTTTTTTATTTAACTATTTATTGTGTTGGTATATTTTAAGGAGAGATTTTGATTTTAAAATTTTATGAGAATTTGTGAGGTTTTATGTTTTAACTTAAAATTTTGGTTACTAAGAAAATTGGTGTAATAATTAAAAAATAGGAGAAAAATGAGAGTATATATAAAAAAATGAGGATATTTATATAATTTGTTTTAAAATTGGTTCTTTTCGAACTCAAAGAAAAAAACTTTAAACAAATTGATCATCATCCTAACCGTAGGAGCATTCTTAATTTTTTTTTTAATTTTAAACTTATTTTTGCAACGAGGTATTAATGATTTTTGTTCCCATATTAACAATAAAGAGATTTTTTATTTTTTTATTCTTTTAAGTTTAAAAGTATTTTTGAAACATTTGAAAGTTTAGAGATATTTTTGAAATAAAACTTTAACCGTATCTATCCCAAACTAATTGAAGAATGAAAAATGACAGGCAGACAAATCCAGTATAGTAGACGAAGCAGTAAACTACATAAAAGTCCTTCAAGAAACCCTCCAAAAACTCCACAAACAAAAGCTCCAAAAACTCAACAACAATAATAACCCATTTCTGAGCTGCTCTAAGATTGTTCATCATCCCTTACCCACAACCCGCGAGGCATTCTTGGCTGACCAAGCCTCCTCCAACGACGACGTCTCGTCGTCGTCCGCTGCCCTACTTCCTCATCTTTCCACCACCATCACTGCCGACAATGTTATTAGTATTCTCCCACCGCCACCGCCACCCTCCATCTTTCAAACTTGGACTTCCTCCAACCTCGTCTTAAGCATCTGCGGCCCCCATGCTCATTTCTCCGTCTGCTCCACCAAGAAACCCGGCATGTTTGCTGCCCTTTGTTATGTTCTTGACAAGCATCGAATCGACGTCGTTTCCGCTCATGTCTCCTCCGATTTCCATCGTTCCTTCTTTATGATTCAAGCTCATGTAAGTATCATATCCATATCTTCATCTTTACATTTTCACTTCTTTGGGTTTCTTCTTTTGGAGACGTGCTTACAAATTTAGTTTTGCAAAAACTAATGAAACCTTTTGTTTAAAGTAAAATGTAGTTTGAATGTTAAAACTTAGATAGAACACTATATATAATTTTGAAATTTTTTGGTTAAAGTGCAAGTTTAGTCCTTTAGCTCGTGTTTATTTAGTATTTGAATTTTTAAAAGTGAAGACCTATTATTTTGTGCCTAATAGGTGTCTGACATATTTAAAATTGTTAAAAATTAATTGACCTATTAAATATAAATTTGAATTTTATGTTTAATATAATGGAACTATAAACTTTCAATTTCATGTCTAATAAATCTGTAAATTTCTATTTTCAAAACATATTTGAGACATGAAATGGAAAATCTAATGACCTACCAGACACGAAATTAAAAATTTAAGTATCTATTGGACACAAAATTAAAAGTTGAAGGACTTAATTATCAAAAACATTTTTAAAGTTCAGTGATCTATTAGATACAAATTGAAATGTATATAACACTTGAAAGTTAAGGAATCAAATAAATACAACCCTTAAAAAGTTTAAAGACTAAACTTGTAATTTTACTAGAATTTTAATACATTTAAAAATTTTATTACATTAAAACCAAATTGAAAACTAATAGGCATTTTATATAATATTCTTTTCTTCTTAGGAAAGGTAGGGAACTAAAAAAAACAAGAAACAAGAACATTACCAAACAAATTTCTTCTCGAGATCATTCCAAAAGTTGTTATTTGAAATGAGTTGTTTCGACGAAAGCAGGCGAACGAAGGTTATGATGAATTTGGGACGGCAACGGTGGCAGAAGATACATTCAAGGAAGCTGCAGGGGAGATCATATTTTGGTTGTCTTCTTGA ATGTCCCACCACCCTCCTCCTTGGACCCTCCTCAACTCCGGCAGCGACGTCGACGATGACGACGACGACAACAACGACAACTACAATGACATCAAATTCCCCATCAACAACACCCACCTTCTCCCTCCTCCCCCGACGCAGGTGGGGAAGAAGAGAGAGGCAACCGAGGGAAAATCGGGTGGCGCTACCGAGTCGTCGGATCACGACATTCATATTTGGACGGAGAGAGAACGGCGGAAGAAAATGAGAAATATGTTCTCTAATCTTCATGCCTTGCTTCCTCACCTTCCTCCTAAGATTGTTCATCATCCCTTACCCACAACCCGCGAGGCATTCTTGGCTGACCAAGCCTCCTCCAACGACGACGTCTCGTCGTCGTCCGCTGCCCTACTTCCTCATCTTTCCACCACCATCACTGCCGACAATGTTATTAGTATTCTCCCACCGCCACCGCCACCCTCCATCTTTCAAACTTGGACTTCCTCCAACCTCGTCTTAAGCATCTGCGGCCCCCATGCTCATTTCTCCGTCTGCTCCACCAAGAAACCCGGCATGTTTGCTGCCCTTTGTTATGTTCTTGACAAGCATCGAATCGACGTCGTTTCCGCTCATGTCTCCTCCGATTTCCATCGTTCCTTCTTTATGATTCAAGCTCATGCGAACGAAGGTTATGATGAATTTGGGACGGCAACGGTGGCAGAAGATACATTCAAGGAAGCTGCAGGGGAGATCATATTTTGGTTGTCTTCTTGA ATGTCCCACCACCCTCCTCCTTGGACCCTCCTCAACTCCGGCAGCGACGTCGACGATGACGACGACGACAACAACGACAACTACAATGACATCAAATTCCCCATCAACAACACCCACCTTCTCCCTCCTCCCCCGACGCAGGTGGGGAAGAAGAGAGAGGCAACCGAGGGAAAATCGGGTGGCGCTACCGAGTCGTCGGATCACGACATTCATATTTGGACGGAGAGAGAACGGCGGAAGAAAATGAGAAATATGTTCTCTAATCTTCATGCCTTGCTTCCTCACCTTCCTCCTAAGATTGTTCATCATCCCTTACCCACAACCCGCGAGGCATTCTTGGCTGACCAAGCCTCCTCCAACGACGACGTCTCGTCGTCGTCCGCTGCCCTACTTCCTCATCTTTCCACCACCATCACTGCCGACAATGTTATTAGTATTCTCCCACCGCCACCGCCACCCTCCATCTTTCAAACTTGGACTTCCTCCAACCTCGTCTTAAGCATCTGCGGCCCCCATGCTCATTTCTCCGTCTGCTCCACCAAGAAACCCGGCATGTTTGCTGCCCTTTGTTATGTTCTTGACAAGCATCGAATCGACGTCGTTTCCGCTCATGTCTCCTCCGATTTCCATCGTTCCTTCTTTATGATTCAAGCTCATGCGAACGAAGGTTATGATGAATTTGGGACGGCAACGGTGGCAGAAGATACATTCAAGGAAGCTGCAGGGGAGATCATATTTTGGTTGTCTTCTTGA MSHHPPPWTLLNSGSDVDDDDDDNNDNYNDIKFPINNTHLLPPPPTQVGKKREATEGKSGGATESSDHDIHIWTERERRKKMRNMFSNLHALLPHLPPKIVHHPLPTTREAFLADQASSNDDVSSSSAALLPHLSTTITADNVISILPPPPPPSIFQTWTSSNLVLSICGPHAHFSVCSTKKPGMFAALCYVLDKHRIDVVSAHVSSDFHRSFFMIQAHANEGYDEFGTATVAEDTFKEAAGEIIFWLSS
BLAST of Lsi03G004950 vs. Swiss-Prot
Match: BH095_ARATH (Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.1e-16 Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of Lsi03G004950 vs. TrEMBL
Match: A0A0A0K4R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073650 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 1.2e-96 Identity = 201/299 (67.22%), Postives = 216/299 (72.24%), Query Frame = 1
BLAST of Lsi03G004950 vs. TrEMBL
Match: A5B4T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00170 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.1e-40 Identity = 99/230 (43.04%), Postives = 130/230 (56.52%), Query Frame = 1
BLAST of Lsi03G004950 vs. TrEMBL
Match: V4UAF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030106mg PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.8e-39 Identity = 111/285 (38.95%), Postives = 149/285 (52.28%), Query Frame = 1
BLAST of Lsi03G004950 vs. TrEMBL
Match: M5XR14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018148mg PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.1e-36 Identity = 96/224 (42.86%), Postives = 124/224 (55.36%), Query Frame = 1
BLAST of Lsi03G004950 vs. TrEMBL
Match: A0A067EX72_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g037241mg PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 9.3e-36 Identity = 107/276 (38.77%), Postives = 140/276 (50.72%), Query Frame = 1
BLAST of Lsi03G004950 vs. TAIR10
Match: AT1G49770.1 (AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 88.6 bits (218), Expect = 6.0e-18 Identity = 59/160 (36.88%), Postives = 88/160 (55.00%), Query Frame = 1
BLAST of Lsi03G004950 vs. NCBI nr
Match: gi|700188696|gb|KGN43929.1| (hypothetical protein Csa_7G073650 [Cucumis sativus]) HSP 1 Score: 360.9 bits (925), Expect = 1.8e-96 Identity = 201/299 (67.22%), Postives = 216/299 (72.24%), Query Frame = 1
BLAST of Lsi03G004950 vs. NCBI nr
Match: gi|659109917|ref|XP_008454949.1| (PREDICTED: transcription factor bHLH95-like [Cucumis melo]) HSP 1 Score: 357.1 bits (915), Expect = 2.6e-95 Identity = 204/300 (68.00%), Postives = 214/300 (71.33%), Query Frame = 1
BLAST of Lsi03G004950 vs. NCBI nr
Match: gi|778725107|ref|XP_004137111.2| (PREDICTED: transcription factor bHLH95 [Cucumis sativus]) HSP 1 Score: 320.1 bits (819), Expect = 3.5e-84 Identity = 176/253 (69.57%), Postives = 185/253 (73.12%), Query Frame = 1
BLAST of Lsi03G004950 vs. NCBI nr
Match: gi|698511355|ref|XP_009800782.1| (PREDICTED: transcription factor bHLH95-like [Nicotiana sylvestris]) HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40 Identity = 100/232 (43.10%), Postives = 135/232 (58.19%), Query Frame = 1
BLAST of Lsi03G004950 vs. NCBI nr
Match: gi|225428845|ref|XP_002282369.1| (PREDICTED: transcription factor bHLH95 [Vitis vinifera]) HSP 1 Score: 174.1 bits (440), Expect = 3.1e-40 Identity = 99/230 (43.04%), Postives = 130/230 (56.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |