Cp4.1LG15g04870 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g04870
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionBasic helix-loop-helix transcription factor
LocationCp4.1LG15 : 5851033 .. 5853186 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCAGCCTCCACCACCTCCCTTGGGCCCTCCTCAACTCCTGCTCCGACAAAGACCATTTCCCTCCGCCGCCCACGCAGTCCGGGAAGAAGAGAGAGGCGGCGGCGGTGGCGGCGGAGAGAAAATCATGTGGCGGGGCCGCGTCCGCTCATGATATTCATATTTGGACGGAGAGAGAACGGCGGAAGAAAATGAGAACCATGTTCGCTAATCTTCATGCTTTGCTTCCTCATCTTCCTGCCAAGGTATTATTTATTTATTTATTTATTTATATATATATATATAAGAGACAAGCAGTGGCATTATCATCAAGCCTTTTTAATTAATAATAATGGAGAGATTTGATTTTAATGGCATGTTTTTAATGTAAATAAATAAAAAGGGACTTTTTTTTTTTTTTTTTTTTTTTAAATGGAAAATAAAACAAATAGAGTATTGAAGAACATTCACATTTTTTAAGAAAAGTGGCAATTGTCTGTTTTTTGTTTTAAGAGATTTGTTGTCATGTTTTTTTTTTTATAATTAAAAATAATAATTTAAGTTTGTTTTGTCTCGGGAATTGATATAATCATTGTGAGTATCTCCAAGAGTGTGAAAAAAATTTCTTAGCAAACACGTTTTAAAAACCTTGAGGTGAGAGAGGAGCAAAACATTCTTCATAAATGTGTGGAAAATTCTCCTTAATAGCCAACCCGAGAGGTAAAACCTAAGAAGTATAATATCGGCGAGTGGTAAGCTTGAGCTGTTACAATCTGTGTTATTGAACCAGTTTAGTTAATGAGAATAAATCTCTCTCCTTACTCTTCATTCCTAGTCCCGTTTGATGTGGGTAGTGTTACTGACCCAGTTTAACTAATGCTAGCAGTGAACTTGGACTGCTTTCTGCTTACTCTTCGTTTGATGTGGGTAGTGTTATTGACCTAATTTAGCTAATGGTGAACTTGGACTGCTTTCTGCTTACTCTTCATTTCTAGTCCCATTTGAGATGGGTAGTGTTACTGACCTAGTTTAGCTATGCTAGCTGTGAACTTGGACTGCTTTCTGCTTACTCTTCATTCCTAGTCCCGTTTGATTTGGGTAGTGTTACTGACCCAGTTTGGCTAATGCTAGCGGTGAACTTGAACTGCTTTCTGCTTACTCTTTATTCCTAGTCCCGTTTGAAGTGAGTAATGTTACTAACCCAGTTTAGCTAACGAGAAAAAATCTCTCTGCATACTGTTCATTCTTAATCCCGTTTAAGGTGGGTTTCTGCGGGGCCCTGGGTTTAATGGACATTAGAATCTCAAATCGTTTTTTAGCAATGAACTAGATAAGAATTTGAATCTCTAGTTTATTGGTCGAGCACGTGGGGCGGGTTGGCATGCATGCATAGGCTTTTGTGGGTGAAATAATAATCCAATAATGAATGGGTAATGGCAGGTAGACAAATCCAGTTTAGTAGACGAAGCAGTAAACCACATAAGAACCCTTCAACAAACCCTTCAAAATCTCCACAAACAAAAGCTGGAAAGGCTCAACAACGACACTAATCCATCTCTGAGCTTCTCCAAGATTGTTCATCATCCCTCCGCCCGTTCCTCAGCCGCCACGACCCGCGAGGCCTTCTTGGCCGACCAAGCTTCCTCCACCAACGACATGTCGTCCACTCTATTTCCTCAGCTTTCCACCGTCGCCGCTGCAGGCGACAATGTTGTTAGTATTCTCCCTTCGCCACCCTCCTCCTTCCAGACTTGGTTGTCCTCCAACCTCGTCTTGAATGTTTGCGGCCACCATGCCCATTTTTGTATCTGCTCCGTCAAGAAGCCTGGTTTGTTCCCCACGCTTTGTTATGTTCTTGAGAAGCATGAAATCCACGTTGTTTCGGCTCATGTCTCCTCGGATTACCATCGCTCCTTTTTTATGATTCATGCCCATGTAAGTATTCGTCGTACTTTCTTTACATGTTCACTTCTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGAGATCATTTCGAAACATGTTTGTAACGAGTTGTTTTGAAGAATGTAGGTGAACGGAGGTTACGATGAATTTGAGGCGGCGACCGTGGCGGAAGATACATTCAAAGAAGCTGCGAGGGAGATCATCTTCTGGTTGTCTTCTTGA

mRNA sequence

ATGTCCAGCCTCCACCACCTCCCTTGGGCCCTCCTCAACTCCTGCTCCGACAAAGACCATTTCCCTCCGCCGCCCACGCAGTCCGGGAAGAAGAGAGAGGCGGCGGCGGTGGCGGCGGAGAGAAAATCATGTGGCGGGGCCGCGTCCGCTCATGATATTCATATTTGGACGGAGAGAGAACGGCGGAAGAAAATGAGAACCATGTTCGCTAATCTTCATGCTTTGCTTCCTCATCTTCCTGCCAAGGTAGACAAATCCAGTTTAGTAGACGAAGCAGTAAACCACATAAGAACCCTTCAACAAACCCTTCAAAATCTCCACAAACAAAAGCTGGAAAGGCTCAACAACGACACTAATCCATCTCTGAGCTTCTCCAAGATTGTTCATCATCCCTCCGCCCGTTCCTCAGCCGCCACGACCCGCGAGGCCTTCTTGGCCGACCAAGCTTCCTCCACCAACGACATGTCGTCCACTCTATTTCCTCAGCTTTCCACCGTCGCCGCTGCAGGCGACAATGTTGTTAGTATTCTCCCTTCGCCACCCTCCTCCTTCCAGACTTGGTTGTCCTCCAACCTCGTCTTGAATGTTTGCGGCCACCATGCCCATTTTTGTATCTGCTCCGTCAAGAAGCCTGGTTTGTTCCCCACGCTTTGTTATGTTCTTGAGAAGCATGAAATCCACGTTGTTTCGGCTCATGTCTCCTCGGATTACCATCGCTCCTTTTTTATGATTCATGCCCATGTGAACGGAGGTTACGATGAATTTGAGGCGGCGACCGTGGCGGAAGATACATTCAAAGAAGCTGCGAGGGAGATCATCTTCTGGTTGTCTTCTTGA

Coding sequence (CDS)

ATGTCCAGCCTCCACCACCTCCCTTGGGCCCTCCTCAACTCCTGCTCCGACAAAGACCATTTCCCTCCGCCGCCCACGCAGTCCGGGAAGAAGAGAGAGGCGGCGGCGGTGGCGGCGGAGAGAAAATCATGTGGCGGGGCCGCGTCCGCTCATGATATTCATATTTGGACGGAGAGAGAACGGCGGAAGAAAATGAGAACCATGTTCGCTAATCTTCATGCTTTGCTTCCTCATCTTCCTGCCAAGGTAGACAAATCCAGTTTAGTAGACGAAGCAGTAAACCACATAAGAACCCTTCAACAAACCCTTCAAAATCTCCACAAACAAAAGCTGGAAAGGCTCAACAACGACACTAATCCATCTCTGAGCTTCTCCAAGATTGTTCATCATCCCTCCGCCCGTTCCTCAGCCGCCACGACCCGCGAGGCCTTCTTGGCCGACCAAGCTTCCTCCACCAACGACATGTCGTCCACTCTATTTCCTCAGCTTTCCACCGTCGCCGCTGCAGGCGACAATGTTGTTAGTATTCTCCCTTCGCCACCCTCCTCCTTCCAGACTTGGTTGTCCTCCAACCTCGTCTTGAATGTTTGCGGCCACCATGCCCATTTTTGTATCTGCTCCGTCAAGAAGCCTGGTTTGTTCCCCACGCTTTGTTATGTTCTTGAGAAGCATGAAATCCACGTTGTTTCGGCTCATGTCTCCTCGGATTACCATCGCTCCTTTTTTATGATTCATGCCCATGTGAACGGAGGTTACGATGAATTTGAGGCGGCGACCGTGGCGGAAGATACATTCAAAGAAGCTGCGAGGGAGATCATCTTCTGGTTGTCTTCTTGA

Protein sequence

MSSLHHLPWALLNSCSDKDHFPPPPTQSGKKREAAAVAAERKSCGGAASAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQQTLQNLHKQKLERLNNDTNPSLSFSKIVHHPSARSSAATTREAFLADQASSTNDMSSTLFPQLSTVAAAGDNVVSILPSPPSSFQTWLSSNLVLNVCGHHAHFCICSVKKPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDTFKEAAREIIFWLSS
Homology
[Close]
BLAST of Cp4.1LG15g04870 vs. Swiss-Prot
Match: BH095_ARATH (Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-39
Identity = 103/251 (41.04%), Postives = 147/251 (58.57%), Query Frame = 1 

Query: 51  HDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQQTLQNLHKQK 110
           H+IHIWTERERRKKMR MF+ LHALLP LP K DKS++VDEAV+ I++L+QTLQ L  QK
Sbjct: 71  HEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQK 130

Query: 111 LERL-----NNDTNPSLSF--------------SKIVHHP-SARSSAATTREAFLADQAS 170
           LE+L     + +T P+ +F              + I +HP  A ++ +  R AFLADQ S
Sbjct: 131 LEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLADQVS 190

Query: 171 STNDMSSTLFPQLSTVAAAGDNVVSILPSPPSSFQTWLSSNLVLNVCGHHAHFCICSVK- 230
           S+              +AA  N+      P  +F TW S N+VL +CG+ A F +C  K 
Sbjct: 191 SS--------------SAAAANLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKH 250

Query: 231 KPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDE--FEAATVAEDTFKE 279
           KPG+F ++CY+ EK+ + V+ A+VSS+   S ++I A VN   +           D FK+
Sbjct: 251 KPGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQAQVNPSCENQLLGNGLGVVDVFKQ 307

[Close]
BLAST of Cp4.1LG15g04870 vs. TrEMBL
Match: A0A0A0K4R5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073650 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.6e-92
Identity = 198/306 (64.71%), Postives = 222/306 (72.55%), Query Frame = 1 

Query: 1   MSSLHHLPWALLN-SCSDKDHF------------------PPPPTQSGKKREAAAVAAER 60
           MS+ HH  W LLN S SD D                    PPPP Q+GKKRE   +  E 
Sbjct: 1   MSAHHHPSWTLLNYSGSDIDDDDNNNNHENNNNNNTGYLPPPPPMQAGKKRE---LETEG 60

Query: 61  KSCGGAASA-HDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQ 120
           KS G   S+ HDIHIWTERERRKKMR MF+NLHALLPHLP K DKSS+VDEAVN+I+TLQ
Sbjct: 61  KSAGATESSDHDIHIWTERERRKKMRNMFSNLHALLPHLPPKADKSSIVDEAVNYIKTLQ 120

Query: 121 QTLQNLHKQKLERLNNDTN----PSLSFSKIVHHPSARSSAATTREAFLADQASSTNDMS 180
           +T Q LHKQK+E+LNN+ N    PS+  SKIVHHP       TTREAFLADQASS +DMS
Sbjct: 121 ETFQRLHKQKVEKLNNNNNNNNNPSMGCSKIVHHP-----LPTTREAFLADQASSNDDMS 180

Query: 181 S--TLFPQLSTVAAAGDNVVSI--LPSPPSSFQTWLSSNLVLNVCGHHAHFCICSVKKPG 240
           S  TL   LST     +NV+S   LPSPPS+FQTW SSNLVL+VCG HAHFC+CS KKPG
Sbjct: 181 SSATLLSHLSTTITP-ENVLSNLPLPSPPSAFQTWTSSNLVLSVCGRHAHFCVCSAKKPG 240

Query: 241 LFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDTFKEAAREI 279
           LF  LCYVL+K+ I VVSAHVSSD H+SFFMI AHV+ GY+EF AATVAEDTFKEAA EI
Sbjct: 241 LFAALCYVLDKYRIDVVSAHVSSDVHQSFFMIQAHVSRGYNEFGAATVAEDTFKEAAGEI 297

[Close]
BLAST of Cp4.1LG15g04870 vs. TrEMBL
Match: A5B4T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00170 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 7.4e-58
Identity = 130/254 (51.18%), Postives = 168/254 (66.14%), Query Frame = 1 

Query: 27  QSGKKREAAAVAAERKSCGGAA--SAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVD 86
           ++GK  + +    E KS GG    S H+IHIWTERERRKKMR MF++LHALLP LP K D
Sbjct: 66  KNGKNGKGSGEGNEGKSGGGGGGESDHEIHIWTERERRKKMRNMFSSLHALLPQLPPKAD 125

Query: 87  KSSLVDEAVNHIRTLQQTLQNLHKQKLERLNNDTNPSLSFSKIVHHPSARSSAATTREAF 146
           KS++VDEAVN+I+TLQ TLQ L KQKLERL   T  +   S I    +++  A  +REAF
Sbjct: 126 KSTIVDEAVNYIKTLQHTLQKLQKQKLERLQGATTVNYEPSII----TSQKLAFDSREAF 185

Query: 147 LADQASSTNDMSSTLFPQLSTVAAAGDNVVSILPSPPSSFQTWLSSNLVLNVCGHHAHFC 206
           LADQ SS+N         L+   +   N +S+    P+ FQ+W S N+ LNVCG+ A   
Sbjct: 186 LADQGSSSN---------LAITPSNSSNSLSVA-RVPAVFQSWTSPNVTLNVCGNEAQIS 245

Query: 207 ICSVKKPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDT 266
           +CS KKPGL  T+CYVLEKH++ V+SAHVSSDY+RS +MI  + NG  D+F      E+ 
Sbjct: 246 VCSPKKPGLLTTICYVLEKHKLEVISAHVSSDYNRSMYMIQTNANGALDQFPVGFPMEEV 305

Query: 267 FKEAAREIIFWLSS 279
           +K+AA EI+FW SS
Sbjct: 306 YKQAAGEIMFWASS 305

[Close]
BLAST of Cp4.1LG15g04870 vs. TrEMBL
Match: W9SMI5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027507 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 9.6e-58
Identity = 133/250 (53.20%), Postives = 161/250 (64.40%), Query Frame = 1 

Query: 37  VAAERKSCGGAASAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHI 96
           +  E K  GG  S H+IHIWTERERRKKMR MFANLHALLP LP K DKS++VDEAVN+I
Sbjct: 119 ITKEGKKVGGGESDHEIHIWTERERRKKMRNMFANLHALLPQLPPKADKSTIVDEAVNYI 178

Query: 97  RTLQQTLQNLHKQKLERLNNDTNPSLSFSKIVHHPSARSSAAT----TREAFLADQASST 156
           RTLQQTLQ L KQKLE+L   T  S + S     PS  S        TREAFLADQ S  
Sbjct: 179 RTLQQTLQKLQKQKLEKLQGATTSSTTISSFNCEPSLISQQKVAYKDTREAFLADQGS-- 238

Query: 157 NDMSSTLFPQLSTVAAAGDNVVSILPS-PPSSFQTWLSSNLVLNVCGHHAHFCICSVKKP 216
               + L    + +     N +S++    P  FQTW SSN+VLN+CG  AH  ICS +KP
Sbjct: 239 ---CNELVTMGNNINNPSSNSLSVVSQFSPVMFQTWTSSNVVLNICGDQAHISICSPRKP 298

Query: 217 GLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAH--VNGGYDEF-EAATVAEDTFKEA 276
           GL  ++CY LEKH+I +VSA +SSD  R+ +MIHAH   NG  D+F EA    E+ FK+A
Sbjct: 299 GLLTSICYALEKHKITLVSAQISSDGDRNMYMIHAHHASNGASDQFLEAFNPVEEVFKQA 358

Query: 277 AREIIFWLSS 279
             EI+ W+SS
Sbjct: 359 VGEIMLWVSS 363

[Close]
BLAST of Cp4.1LG15g04870 vs. TrEMBL
Match: V4UAF0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030106mg PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.1e-56
Identity = 128/232 (55.17%), Postives = 157/232 (67.67%), Query Frame = 1 

Query: 49  SAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQQTLQNLHK 108
           S H+IHIWTERERRKKMR MFANLH+LLP LP K DKSS+VDEAV++I+TLQQTL+ L K
Sbjct: 98  SEHEIHIWTERERRKKMRNMFANLHSLLPQLPPKADKSSIVDEAVSYIKTLQQTLRKLQK 157

Query: 109 QKLERLNNDTNPSLSFSKIVHHPSARSSAATTREAFLADQASSTN-DMSSTLFPQLSTVA 168
           QKLERL      S  F          +SAA T +  LA  A     + SS L    ST A
Sbjct: 158 QKLERLQGVA--SFGFE---------ASAAITPQNKLAIVAHDRQQESSSNLLGANSTDA 217

Query: 169 AAGD-NVVSILPSPPSSFQTWLSSNLVLNVCGHHAHFCICSVKKPGLFPTLCYVLEKHEI 228
                N++S+ P+ P  FQTW SSN+VLN+CG  AH  ICS KKPG+F T+CY+LEKH+I
Sbjct: 218 TNNSSNLLSVSPTYPVIFQTWSSSNVVLNICGDEAHISICSPKKPGMFSTICYLLEKHKI 277

Query: 229 HVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDTFKEAAREIIFWLSS 279
            V+SA VSSD  R  +MI AHVNG  D+F  A   E+ +K+AA E++FW+SS
Sbjct: 278 EVISAQVSSDLTRRMYMIQAHVNGASDQFSEALPVEEMYKQAASELMFWISS 318

[Close]
BLAST of Cp4.1LG15g04870 vs. TrEMBL
Match: A0A067KKD7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14785 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55
Identity = 129/241 (53.53%), Postives = 159/241 (65.98%), Query Frame = 1 

Query: 45  GGAASAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQQTLQ 104
           GG  S H+IHIWTERERRKKMR MFANL ALLP LP+KVDKS++VDEAVN+I+TL+QTL+
Sbjct: 107 GGGESDHEIHIWTERERRKKMRNMFANLQALLPQLPSKVDKSTIVDEAVNYIKTLEQTLE 166

Query: 105 NLHKQKLERLNNDTN----PSLSFSKIVHHPSARSSAATTREAFLADQA-SSTNDMSSTL 164
            L KQKLER    T     PS+S         A    A TREAFLADQ   S+N++++ L
Sbjct: 167 KLQKQKLERAQGGTTFCYEPSMSMI-------APEYVAETREAFLADQGIKSSNNLTNIL 226

Query: 165 FPQLSTVAAAGDNVVSILPSP---PSSFQTWLSSNLVLNVCGHHAHFCICSVKKPGLFPT 224
                  A    NVV  LPS    P  FQTW SSN+VLN+CG  A   +CS KKPGLF T
Sbjct: 227 -------ATKSPNVV--LPSRYHHPVQFQTWTSSNVVLNICGEEAQISVCSSKKPGLFTT 286

Query: 225 LCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDTFKEAAREIIFWL 278
           +CY LEKH I ++SAHVSSD ++  +MI A V G  D+F      E+ +++AA EI+ W+
Sbjct: 287 ICYTLEKHNIEMISAHVSSDCNQIMYMIQAQVRGASDKFTETIPVEEIYRQAAGEIMCWV 331

[Close]
BLAST of Cp4.1LG15g04870 vs. TAIR10
Match: AT1G49770.1 (AT1G49770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 2.1e-40
Identity = 103/251 (41.04%), Postives = 147/251 (58.57%), Query Frame = 1 

Query: 51  HDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQQTLQNLHKQK 110
           H+IHIWTERERRKKMR MF+ LHALLP LP K DKS++VDEAV+ I++L+QTLQ L  QK
Sbjct: 71  HEIHIWTERERRKKMRDMFSKLHALLPQLPPKADKSTIVDEAVSSIKSLEQTLQKLEMQK 130

Query: 111 LERL-----NNDTNPSLSF--------------SKIVHHP-SARSSAATTREAFLADQAS 170
           LE+L     + +T P+ +F              + I +HP  A ++ +  R AFLADQ S
Sbjct: 131 LEKLQYSSASTNTTPTTTFAYAPSSSSSPTALLTPISNHPIDATATDSYPRAAFLADQVS 190

Query: 171 STNDMSSTLFPQLSTVAAAGDNVVSILPSPPSSFQTWLSSNLVLNVCGHHAHFCICSVK- 230
           S+              +AA  N+      P  +F TW S N+VL +CG+ A F +C  K 
Sbjct: 191 SS--------------SAAAANLPYPCNDPIVNFDTWSSRNVVLTICGNEAFFNLCVPKH 250

Query: 231 KPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDE--FEAATVAEDTFKE 279
           KPG+F ++CY+ EK+ + V+ A+VSS+   S ++I A VN   +           D FK+
Sbjct: 251 KPGVFTSVCYLFEKYNMEVLFANVSSNVFWSTYVIQAQVNPSCENQLLGNGLGVVDVFKQ 307

[Close]
BLAST of Cp4.1LG15g04870 vs. TAIR10
Match: AT2G22750.2 (AT2G22750.2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06
Identity = 38/127 (29.92%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 54  HIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQQTLQNLHKQKLER 113
           HI  ER+RR+K+   F  L AL+P L  K+DK+S++ +A+ HI+ LQ++++   +QK E+
Sbjct: 127 HILAERKRREKLTQRFVALSALIPGLK-KMDKASVLGDAIKHIKYLQESVKEYEEQKKEK 186

Query: 114 LNNDTNPSLSFSKIV---HHPSARSSAATTREAFLADQASSTNDMSSTLFPQLSTVAAAG 173
                      S ++   H PS+ SS+   R +            SS+  P++    +  
Sbjct: 187 TMESVVLVKKSSLVLDENHQPSSSSSSDGNRNS------------SSSNLPEIEVRVSGK 240

Query: 174 DNVVSIL 178
           D ++ IL
Sbjct: 247 DVLIKIL 240

[Close]
BLAST of Cp4.1LG15g04870 vs. NCBI nr
Match: gi|659109917|ref|XP_008454949.1| (PREDICTED: transcription factor bHLH95-like [Cucumis melo])

HSP 1 Score: 347.1 bits (889), Expect = 2.9e-92
Identity = 198/307 (64.50%), Postives = 223/307 (72.64%), Query Frame = 1 

Query: 1   MSSLHHLPWALLN-SCSDKD------------------HFPPPPT--QSGKKREAAAVAA 60
           MS  HH  W LLN S SD D                  + PPPP   Q GKKRE      
Sbjct: 1   MSPHHHPSWTLLNYSGSDVDDDDNNDENNNSNNNTNTGYLPPPPAPMQVGKKRELET--H 60

Query: 61  ERKSCGGAASA-HDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRT 120
           E KS G   S+ HDIHIWTERERRKKMR MF+NLHALLPHLP K DKSS+VDEAVN+I+T
Sbjct: 61  EGKSAGATESSDHDIHIWTERERRKKMRNMFSNLHALLPHLPPKADKSSIVDEAVNYIKT 120

Query: 121 LQQTLQNLHKQKLERLNNDTNPSLSFSKIVHHPSARSSAATTREAFLADQASSTNDMSS- 180
           LQ+T + LHKQK+E+LNN++NPS+S SKIVH+P+      TTREAFLADQASS +DMSS 
Sbjct: 121 LQETFERLHKQKVEKLNNNSNPSMSCSKIVHNPAL----PTTREAFLADQASSNDDMSSS 180

Query: 181 -TLFPQLSTVAAAGDNVVSIL-----PSPPSSFQTWLSSNLVLNVCGHHAHFCICSVKKP 240
            TL   LST     +NV+SIL     PSPPS+FQTW SSNLVL+VCG HAHFC+CS KKP
Sbjct: 181 ATLLSHLSTTVTP-ENVISILPPPPPPSPPSAFQTWTSSNLVLSVCGRHAHFCVCSAKKP 240

Query: 241 GLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDTFKEAARE 279
           GLF  LCYVL+KH I VVSAHVSSD H+SFFMI AHV+ GY+E  AATVAEDTFKEAA E
Sbjct: 241 GLFAALCYVLDKHRIDVVSAHVSSDLHQSFFMIQAHVSRGYNELGAATVAEDTFKEAAGE 300

[Close]
BLAST of Cp4.1LG15g04870 vs. NCBI nr
Match: gi|700188696|gb|KGN43929.1| (hypothetical protein Csa_7G073650 [Cucumis sativus])

HSP 1 Score: 345.9 bits (886), Expect = 6.6e-92
Identity = 198/306 (64.71%), Postives = 222/306 (72.55%), Query Frame = 1 

Query: 1   MSSLHHLPWALLN-SCSDKDHF------------------PPPPTQSGKKREAAAVAAER 60
           MS+ HH  W LLN S SD D                    PPPP Q+GKKRE   +  E 
Sbjct: 1   MSAHHHPSWTLLNYSGSDIDDDDNNNNHENNNNNNTGYLPPPPPMQAGKKRE---LETEG 60

Query: 61  KSCGGAASA-HDIHIWTERERRKKMRTMFANLHALLPHLPAKVDKSSLVDEAVNHIRTLQ 120
           KS G   S+ HDIHIWTERERRKKMR MF+NLHALLPHLP K DKSS+VDEAVN+I+TLQ
Sbjct: 61  KSAGATESSDHDIHIWTERERRKKMRNMFSNLHALLPHLPPKADKSSIVDEAVNYIKTLQ 120

Query: 121 QTLQNLHKQKLERLNNDTN----PSLSFSKIVHHPSARSSAATTREAFLADQASSTNDMS 180
           +T Q LHKQK+E+LNN+ N    PS+  SKIVHHP       TTREAFLADQASS +DMS
Sbjct: 121 ETFQRLHKQKVEKLNNNNNNNNNPSMGCSKIVHHP-----LPTTREAFLADQASSNDDMS 180

Query: 181 S--TLFPQLSTVAAAGDNVVSI--LPSPPSSFQTWLSSNLVLNVCGHHAHFCICSVKKPG 240
           S  TL   LST     +NV+S   LPSPPS+FQTW SSNLVL+VCG HAHFC+CS KKPG
Sbjct: 181 SSATLLSHLSTTITP-ENVLSNLPLPSPPSAFQTWTSSNLVLSVCGRHAHFCVCSAKKPG 240

Query: 241 LFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDTFKEAAREI 279
           LF  LCYVL+K+ I VVSAHVSSD H+SFFMI AHV+ GY+EF AATVAEDTFKEAA EI
Sbjct: 241 LFAALCYVLDKYRIDVVSAHVSSDVHQSFFMIQAHVSRGYNEFGAATVAEDTFKEAAGEI 297

[Close]
BLAST of Cp4.1LG15g04870 vs. NCBI nr
Match: gi|778725107|ref|XP_004137111.2| (PREDICTED: transcription factor bHLH95 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.9e-87
Identity = 182/261 (69.73%), Postives = 205/261 (78.54%), Query Frame = 1 

Query: 27  QSGKKREAAAVAAERKSCGGAASA-HDIHIWTERERRKKMRTMFANLHALLPHLPAKVDK 86
           Q+GKKRE   +  E KS G   S+ HDIHIWTERERRKKMR MF+NLHALLPHLP K DK
Sbjct: 2   QAGKKRE---LETEGKSAGATESSDHDIHIWTERERRKKMRNMFSNLHALLPHLPPKADK 61

Query: 87  SSLVDEAVNHIRTLQQTLQNLHKQKLERLNNDTN----PSLSFSKIVHHPSARSSAATTR 146
           SS+VDEAVN+I+TLQ+T Q LHKQK+E+LNN+ N    PS+  SKIVHHP       TTR
Sbjct: 62  SSIVDEAVNYIKTLQETFQRLHKQKVEKLNNNNNNNNNPSMGCSKIVHHP-----LPTTR 121

Query: 147 EAFLADQASSTNDMSS--TLFPQLSTVAAAGDNVVSI--LPSPPSSFQTWLSSNLVLNVC 206
           EAFLADQASS +DMSS  TL   LST     +NV+S   LPSPPS+FQTW SSNLVL+VC
Sbjct: 122 EAFLADQASSNDDMSSSATLLSHLSTTITP-ENVLSNLPLPSPPSAFQTWTSSNLVLSVC 181

Query: 207 GHHAHFCICSVKKPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEA 266
           G HAHFC+CS KKPGLF  LCYVL+K+ I VVSAHVSSD H+SFFMI AHV+ GY+EF A
Sbjct: 182 GRHAHFCVCSAKKPGLFAALCYVLDKYRIDVVSAHVSSDVHQSFFMIQAHVSRGYNEFGA 241

Query: 267 ATVAEDTFKEAAREIIFWLSS 279
           ATVAEDTFKEAA EIIFWLSS
Sbjct: 242 ATVAEDTFKEAAGEIIFWLSS 253

[Close]
BLAST of Cp4.1LG15g04870 vs. NCBI nr
Match: gi|1000967257|ref|XP_015574371.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH95 [Ricinus communis])

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60
Identity = 135/255 (52.94%), Postives = 165/255 (64.71%), Query Frame = 1 

Query: 26  TQSGKKREAAAVAAERKSCGGAASAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVDK 85
           + S   +E  A  A     GG  S H+IHIWTERERRKKMR MFANLHALLP LP K DK
Sbjct: 70  SDSSDAKEEKAGGAGGGGGGGGESDHEIHIWTERERRKKMRNMFANLHALLPQLPPKADK 129

Query: 86  SSLVDEAVNHIRTLQQTLQNLHKQKLERLNNDTNPSLSFSKIVHHPS--ARSSAATTREA 145
           S++VDEAVN+I+TLQQTLQ L KQKLERL          +   + PS       A +REA
Sbjct: 130 STIVDEAVNYIKTLQQTLQKLQKQKLERLQGGA------ATFCYEPSLVTPQKIADSREA 189

Query: 146 FLADQASSTNDMSSTLFPQLSTVAAAGDNVVSILPSPPSSFQTWLSSNLVLNVCGHHAHF 205
           F+ADQ SS N+        LS V     N V  +P  P  FQTW SSN+VLN+CG  A  
Sbjct: 190 FMADQGSSNNN--------LSNVTTRSSNNVPSIPRYPVLFQTWTSSNVVLNICGDEAQI 249

Query: 206 CICSVKKPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAED 265
            ICS KKPGLF T+CYVLEKH I ++SAHVSSD +R+ +MI AHVNG  ++F  +   E+
Sbjct: 250 SICSSKKPGLFTTICYVLEKHNIEMLSAHVSSDSNRNTYMIQAHVNGASNQFAESITVEE 309

Query: 266 TFKEAAREIIFWLSS 279
            +++AA EI+ W+SS
Sbjct: 310 IYRQAAGEIMCWVSS 310

[Close]
BLAST of Cp4.1LG15g04870 vs. NCBI nr
Match: gi|225428845|ref|XP_002282369.1| (PREDICTED: transcription factor bHLH95 [Vitis vinifera])

HSP 1 Score: 232.3 bits (591), Expect = 1.1e-57
Identity = 130/254 (51.18%), Postives = 168/254 (66.14%), Query Frame = 1 

Query: 27  QSGKKREAAAVAAERKSCGGAA--SAHDIHIWTERERRKKMRTMFANLHALLPHLPAKVD 86
           ++GK  + +    E KS GG    S H+IHIWTERERRKKMR MF++LHALLP LP K D
Sbjct: 66  KNGKNGKGSGEGNEGKSGGGGGGESDHEIHIWTERERRKKMRNMFSSLHALLPQLPPKAD 125

Query: 87  KSSLVDEAVNHIRTLQQTLQNLHKQKLERLNNDTNPSLSFSKIVHHPSARSSAATTREAF 146
           KS++VDEAVN+I+TLQ TLQ L KQKLERL   T  +   S I    +++  A  +REAF
Sbjct: 126 KSTIVDEAVNYIKTLQHTLQKLQKQKLERLQGATTVNYEPSII----TSQKLAFDSREAF 185

Query: 147 LADQASSTNDMSSTLFPQLSTVAAAGDNVVSILPSPPSSFQTWLSSNLVLNVCGHHAHFC 206
           LADQ SS+N         L+   +   N +S+    P+ FQ+W S N+ LNVCG+ A   
Sbjct: 186 LADQGSSSN---------LAITPSNSSNSLSVA-RVPAVFQSWTSPNVTLNVCGNEAQIS 245

Query: 207 ICSVKKPGLFPTLCYVLEKHEIHVVSAHVSSDYHRSFFMIHAHVNGGYDEFEAATVAEDT 266
           +CS KKPGL  T+CYVLEKH++ V+SAHVSSDY+RS +MI  + NG  D+F      E+ 
Sbjct: 246 VCSPKKPGLLTTICYVLEKHKLEVISAHVSSDYNRSMYMIQTNANGALDQFPVGFPMEEV 305

Query: 267 FKEAAREIIFWLSS 279
           +K+AA EI+FW SS
Sbjct: 306 YKQAAGEIMFWASS 305

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g04870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH095_ARATH3.8e-3941.04Transcription factor bHLH95 OS=Arabidopsis thaliana GN=BHLH95 PE=2 SV=2[more]
BLAST of Cp4.1LG15g04870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K4R5_CUCSA4.6e-9264.71Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073650 PE=4 SV=1[more]
A5B4T9_VITVI7.4e-5851.18Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00170 PE=4 SV=... [more]
W9SMI5_9ROSA9.6e-5853.20Uncharacterized protein OS=Morus notabilis GN=L484_027507 PE=4 SV=1[more]
V4UAF0_9ROSI3.1e-5655.17Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030106mg PE=4 SV=1[more]
A0A067KKD7_JATCU3.4e-5553.53Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14785 PE=4 SV=1[more]
BLAST of Cp4.1LG15g04870 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49770.12.1e-4041.04 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT2G22750.22.6e-0629.92 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of Cp4.1LG15g04870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109917|ref|XP_008454949.1|2.9e-9264.50PREDICTED: transcription factor bHLH95-like [Cucumis melo][more]
gi|700188696|gb|KGN43929.1|6.6e-9264.71hypothetical protein Csa_7G073650 [Cucumis sativus][more]
gi|778725107|ref|XP_004137111.2|2.9e-8769.73PREDICTED: transcription factor bHLH95 [Cucumis sativus][more]
gi|1000967257|ref|XP_015574371.1|1.7e-6052.94PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH95 [Ricinus communis][more]
gi|225428845|ref|XP_002282369.1|1.1e-5751.18PREDICTED: transcription factor bHLH95 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009793 embryo development ending in seed dormancy
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0005488 binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g04870.1Cp4.1LG15g04870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 54..114
score: 1.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 57..100
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 57..105
score: 1.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 49..99
score: 13
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 51..110
score: 3.53
NoneNo IPR availableunknownCoilCoilcoord: 89..109
scor
NoneNo IPR availablePANTHERPTHR11514MYCcoord: 31..276
score: 3.6
NoneNo IPR availablePANTHERPTHR11514:SF57SUBFAMILY NOT NAMEDcoord: 31..276
score: 3.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g04870Cucsa.219850Cucumber (Gy14) v1cgycpeB0594
Cp4.1LG15g04870CmaCh11G017490Cucurbita maxima (Rimu)cmacpeB116
Cp4.1LG15g04870CmaCh19G006030Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g04870CmoCh19G006210Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g04870CmoCh11G013630Cucurbita moschata (Rifu)cmocpeB095
Cp4.1LG15g04870Cla016013Watermelon (97103) v1cpewmB268
Cp4.1LG15g04870Csa7G073650Cucumber (Chinese Long) v2cpecuB258
Cp4.1LG15g04870MELO3C018451Melon (DHL92) v3.5.1cpemeB225
Cp4.1LG15g04870ClCG02G005950Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g04870CSPI07G07620Wild cucumber (PI 183967)cpecpiB258
Cp4.1LG15g04870Lsi03G004950Bottle gourd (USVL1VR-Ls)cpelsiB208
Cp4.1LG15g04870MELO3C018451.2Melon (DHL92) v3.6.1cpemedB263
Cp4.1LG15g04870CsaV3_7G008580Cucumber (Chinese Long) v3cpecucB0323
Cp4.1LG15g04870Bhi05G000921Wax gourdcpewgoB0330
Cp4.1LG15g04870CsGy7G007190Cucumber (Gy14) v2cgybcpeB911
Cp4.1LG15g04870Carg26411Silver-seed gourdcarcpeB1125
Cp4.1LG15g04870Carg22068Silver-seed gourdcarcpeB0295
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG15g04870Cp4.1LG04g08060Cucurbita pepo (Zucchini)cpecpeB269
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g04870Cucumber (Chinese Long) v3cpecucB0292
Cp4.1LG15g04870Cucumber (Chinese Long) v3cpecucB0302
Cp4.1LG15g04870Cucumber (Chinese Long) v3cpecucB0311
Cp4.1LG15g04870Cucumber (Chinese Long) v3cpecucB0319
Cp4.1LG15g04870Wax gourdcpewgoB0314
Cp4.1LG15g04870Wax gourdcpewgoB0335
Cp4.1LG15g04870Cucurbita pepo (Zucchini)cpecpeB261
Cp4.1LG15g04870Cucurbita pepo (Zucchini)cpecpeB262
Cp4.1LG15g04870Cucurbita pepo (Zucchini)cpecpeB264
Cp4.1LG15g04870Cucumber (Gy14) v1cgycpeB0653
Cp4.1LG15g04870Cucumber (Chinese Long) v2cpecuB242
Cp4.1LG15g04870Cucumber (Chinese Long) v2cpecuB256
Cp4.1LG15g04870Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g04870Bottle gourd (USVL1VR-Ls)cpelsiB217
Cp4.1LG15g04870Watermelon (Charleston Gray)cpewcgB237
Cp4.1LG15g04870Watermelon (97103) v1cpewmB261
Cp4.1LG15g04870Melon (DHL92) v3.5.1cpemeB241
Cp4.1LG15g04870Cucumber (Gy14) v2cgybcpeB186
Cp4.1LG15g04870Cucumber (Gy14) v2cgybcpeB336
Cp4.1LG15g04870Melon (DHL92) v3.6.1cpemedB266
Cp4.1LG15g04870Melon (DHL92) v3.6.1cpemedB285
Cp4.1LG15g04870Melon (DHL92) v3.6.1cpemedB288
Cp4.1LG15g04870Silver-seed gourdcarcpeB1079
Cp4.1LG15g04870Silver-seed gourdcarcpeB1130