Lsi03G004370 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATCACGAGAGGGGAAGAACGCGGGCAGTTCTCGCTTCTCGGTCGTCGGAAGAGAGAACAAAATAGCGATGAAATTAGAAACCCAAAGAAGCTGAGTTAATTAAACAGTGGCGAAAATGGAGGATGGTGAAGAAGGCGAGTCGAGAGGCTTGGCAAATGCGTCAGCCTCATCTCTACAACCAAATTTCAAACCTAAAAGAGTCACTAACGAGCAGCTCTCGAAATTTCAGGTACTCTTTTTCCTTGATTTCCATTCCATTCGAATTTGTGTTTAGGGTTTAGGGTTTATTCAATATCATCCTTCATTATAATGCGAAAGAAAGAAAGAAACTTTTTGGTAGTGAAATTGTGAAAGGTGTTTCTGTATCAAATCAATATGGTGGTTGGAAAACCAATTCTAAATATTAGAAGGCTAAGGCTCCGTTTAGTAACTATGTGGTTTTTGAAACACTTATTCCACCTCAAAGTTTCTTTGGTTAGTTAATGTAGTTTTTAAAAATCTGTTTTTATTTTTGGAACTTAGCTAACAATTCAACTTTTTTACTTTGGAATGAAAAAACCCATGGTAAAAAATGATTAGGAAATAGGCACAATTATCAAAAAGCAAAAAGCAAAAACAAAATAGTTAGGTTACCAAATGGACCTTGAGTAGAAACGGTAGCTTTCACTTTCTTAGCAACGTTTTAATGGCTACTTTCTTTGGCTCCCTGCAGCATATGCTTCGTCAATTTTCTGATTACCTATGGTTTTGTTTATTTTATATGTTTGTCCCTCAATATACTCTCTCTATCGTTATCCTTACTCTTTATACTATCAATTTAATATGACAGGAGCTTCAAAGGAGGCGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGGTTTTTCCAGTTCATTGTATTGTGGTGTAGTTTTTTGTTGAAAGCTTATGTTTTAATTTTGAAATATTTGTTGGAAAAGTAGATGCGACTGGAAAATCTCAAATCAAACATCTCAGTACCAGTGATGAAGTTAATGAAGCTGAACACTCGAGACTTTCCAATTCTGAGGTTGATTTTGGAAAAAAGAGCTACCATGTTCAGCAAGACAAGAAAAAAACTAAACTTCCATCCAAAAAGCTACACAAGTTACATTGGGGGTATGAGATATTATGGTACATTATATATATACATACACACATATGAGTGTCTGTAGTATTTAAGACACTCCAAACTGATGGGAAACCACAGTCAAGGTTTGTTTAGAAAGGCATATCTATGAAAGATTATCAACCTATTACGATTAATCCTATTCCTTATGTTGGTGGATTTGGTTAGGTAGATCTAGAAAGAGTTACAAGAATGGACTAAGAGCCTGCTTGGATTGACTTTCTAAGTGTTTATAAACACTTTTTTTAGACTTATAAATACTTATTTAAATGTTTAGAAAGTTAATCCAAGTGCACCCTAAACCTATTGGTCAAGAGTCGAGAGTAGTATTATTTGTAGTATTCAATGATTCCAGTATTATTATGTTCCAATTTTATCATGTTCCAAAGGGACAGTCATCTCTTAATCTGCTAGATTTCCAATGTATGACAAACATTGTAAACATATAAACATCATTAATTTTATAAATACTGTAAGCAAGAATGGACTATCCCTATCTCCGATCAAAGTAAAATTTCCAACGTAAGATTTGATAATTGGATGCGTAATTTATGAGTCACTCATTTGTCCAATAAGCCAGGCAATAATGTGCTGTTACTGGTAAGTGAAAGTCCTTAGACGAACTTTAAAAGGGATAAAAGAGAACAAGAACAACGTAAGAGCCAGGGTGGAGGGCACCCCCCAAAATAGAGAACTACACCATAAGAGCCTTCCAATCACTAATAATCATCTTTGTCTGAGTTGCCTCTAACTATTCCATGAGCTCTTTTGTATTTTTACTCAACTTGAGGGAATTTTTCTTTATCTCTCCCTGGCTGTTTGTGTCCTCTCTGGCTGTTGATGAAGTTTTAGTTACTTTTTCTTACTAAAACAGAACAAGAAATAGGAGAATTTGGATGGGAAAATACAAAGTAGACATAACCTCATCATATATCTTCTATAAATTTTTCTCTGATCTTATTTGTATGTCAGGCTTGACACCAAGGAACCATGGGAAAGGAAGGCAAACATGTAATGATATTTACATATAGGTGGAACGCAGCTGCCAAGTACTGTGGCGCTGAACTAGATTTTGGGAATTGAATGATAGAACTCGAAAGGTTTGTATTATGAGTGATGGATCAAATAATGTGCTGAATGGCCACTTATTGACTCAATTTTATACTTATATCTGCCCATATTGATCTTACAGACCTGAATTATGTGGAAACTCACACAGTGTGGACGATGAAGACTGGACAAAAAGATAGAGAAACTGTAACAAATTCTTGTGAATTGCCTCTAGGTATGATGTCTTCTGCGTTGGCACATAAAAGTAATACATTTCAAGATGATTTAACATTGGTTAGAGAACCATTTTTTACAAGGTTGTATTATAAGTTTATACTTCAACTTGAATGATTATGTGCCTAAGTAATGTTTTTTGAAATATGATGTGTGCTTTTATGTTGCTTTTGCTGTTAAA AAATCACGAGAGGGGAAGAACGCGGGCAGTTCTCGCTTCTCGGTCGTCGGAAGAGAGAACAAAATAGCGATGAAATTAGAAACCCAAAGAAGCTGAGTTAATTAAACAGTGGCGAAAATGGAGGATGGTGAAGAAGGCGAGTCGAGAGGCTTGGCAAATGCGTCAGCCTCATCTCTACAACCAAATTTCAAACCTAAAAGAGTCACTAACGAGCAGCTCTCGAAATTTCAGGAGCTTCAAAGGAGGCGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGATGCGACTGGAAAATCTCAAATCAAACATCTCAGTACCAGTGATGAAGTTAATGAAGCTGAACACTCGAGACTTTCCAATTCTGAGGTTGATTTTGGAAAAAAGAGCTACCATGTTCAGCAAGACAAGAAAAAAACTAAACTTCCATCCAAAAAGCTACACAAGTTACATTGGGGACCTGAATTATGTGGAAACTCACACAGTGTGGACGATGAAGACTGGACAAAAAGATAGAGAAACTGTAACAAATTCTTGTGAATTGCCTCTAGGTATGATGTCTTCTGCGTTGGCACATAAAAGTAATACATTTCAAGATGATTTAACATTGGTTAGAGAACCATTTTTTACAAGGTTGTATTATAAGTTTATACTTCAACTTGAATGATTATGTGCCTAAGTAATGTTTTTTGAAATATGATGTGTGCTTTTATGTTGCTTTTGCTGTTAAA ATGGAGGATGGTGAAGAAGGCGAGTCGAGAGGCTTGGCAAATGCGTCAGCCTCATCTCTACAACCAAATTTCAAACCTAAAAGAGTCACTAACGAGCAGCTCTCGAAATTTCAGGAGCTTCAAAGGAGGCGACTTCAGATTAAATCAAGGTCAAAGATAAGAAAGAATACAAAAGATGCGACTGGAAAATCTCAAATCAAACATCTCAGTACCAGTGATGAAGTTAATGAAGCTGAACACTCGAGACTTTCCAATTCTGAGGTTGATTTTGGAAAAAAGAGCTACCATGTTCAGCAAGACAAGAAAAAAACTAAACTTCCATCCAAAAAGCTACACAAGTTACATTGGGGACCTGAATTATGTGGAAACTCACACAGTGTGGACGATGAAGACTGGACAAAAAGATAG MEDGEEGESRGLANASASSLQPNFKPKRVTNEQLSKFQELQRRRLQIKSRSKIRKNTKDATGKSQIKHLSTSDEVNEAEHSRLSNSEVDFGKKSYHVQQDKKKTKLPSKKLHKLHWGPELCGNSHSVDDEDWTKR
BLAST of Lsi03G004370 vs. TrEMBL
Match: A0A0A0LMI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404820 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.9e-43 Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 1
BLAST of Lsi03G004370 vs. TrEMBL
Match: D7TT13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02710 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.5e-11 Identity = 59/121 (48.76%), Postives = 69/121 (57.02%), Query Frame = 1
BLAST of Lsi03G004370 vs. TrEMBL
Match: A0A0D2SME2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G182300 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.3e-11 Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1
BLAST of Lsi03G004370 vs. TrEMBL
Match: A0A0B0Q1J6_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_08834 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.3e-11 Identity = 52/121 (42.98%), Postives = 69/121 (57.02%), Query Frame = 1
BLAST of Lsi03G004370 vs. TrEMBL
Match: A0A061EH30_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_019408 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 7.3e-11 Identity = 53/121 (43.80%), Postives = 70/121 (57.85%), Query Frame = 1
BLAST of Lsi03G004370 vs. TAIR10
Match: AT5G16160.1 (AT5G16160.1 unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 9.8e-07 Identity = 40/115 (34.78%), Postives = 53/115 (46.09%), Query Frame = 1
BLAST of Lsi03G004370 vs. NCBI nr
Match: gi|659081293|ref|XP_008441256.1| (PREDICTED: uncharacterized protein LOC103485441 isoform X1 [Cucumis melo]) HSP 1 Score: 190.7 bits (483), Expect = 1.7e-45 Identity = 104/117 (88.89%), Postives = 109/117 (93.16%), Query Frame = 1
BLAST of Lsi03G004370 vs. NCBI nr
Match: gi|449441732|ref|XP_004138636.1| (PREDICTED: uncharacterized protein LOC101215509 isoform X3 [Cucumis sativus]) HSP 1 Score: 183.3 bits (464), Expect = 2.7e-43 Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 1
BLAST of Lsi03G004370 vs. NCBI nr
Match: gi|778673071|ref|XP_011649921.1| (PREDICTED: uncharacterized protein LOC101215509 isoform X2 [Cucumis sativus]) HSP 1 Score: 168.7 bits (426), Expect = 7.0e-39 Identity = 99/144 (68.75%), Postives = 105/144 (72.92%), Query Frame = 1
BLAST of Lsi03G004370 vs. NCBI nr
Match: gi|778673083|ref|XP_011649924.1| (PREDICTED: uncharacterized protein LOC101215509 isoform X4 [Cucumis sativus]) HSP 1 Score: 95.9 bits (237), Expect = 5.7e-17 Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 1
BLAST of Lsi03G004370 vs. NCBI nr
Match: gi|659081297|ref|XP_008441258.1| (PREDICTED: uncharacterized protein LOC103485441 isoform X2 [Cucumis melo]) HSP 1 Score: 95.5 bits (236), Expect = 7.5e-17 Identity = 49/60 (81.67%), Postives = 54/60 (90.00%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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