Cp4.1LG01g25820 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCCTCCAAATAAGATAATAAATATTTTATAAAAATAAAATAATAATTTTATTCTCTGAAACTCCAAAGAGTAAAGGATCCATTCGGCAATTCGCATCTAACTCCTCACTTCTCATCCCCAATTCAGATCTCTGCCGAATTTGATTCCGATTTCCGATTTCCAATTTCACAGAGCACAAATTAAGCAACGAATCTCTTAAATCTCCATCTCCCATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCACTGGTAGCCCCACCCGAAGTCCCACCGCTAGCCCCGTCATTCATCTTCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGTACCGATCGCCGTCGATTTCCTTATCAAGACACCTCCGCCGATCCTCAAGATGTCGACGACGATGACGACGACGAGAATATGATTCCGGAAAAGAACGATAAGGAGGTACGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGCGAATCGAAGAACAGGAGGGACTGTTAACGGCGATTAACGCCAGCGCTGCCGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGACCGATATCGACTACATTTCGATACAGATTCCTCCGGCGAGCTTGGCGGCCTGTGCTCGTCGCGATTCCGGAGTAGAAGATGCTCCTCGCTGGTAAAATCTGTACGAAGAAATTCCATATTTTTGCCTCAATTATTTTTTCTTTTTTGATTTTTTATTACAAAATTTCCCTAAAAATTCCGCGTCGAGCAGTAGAAGGGAAGCAATGTAAATAAATAATAATAATAATAATAAAATACGATTGATGTAAATTACAATTAGAAGTTATTATTAAGACTAAGAAAGTAATTAATCAAGTACCTTGATAAACATTTTAACGATTAAATCAAAAGAAAACCGTTACCGTTAAATATTAAATGAAGGTAGCAATGGTGGAATTATTTCTATAGACCGACACGAACAATCATTCATTTATGTACCTTTTATTTACTCGTGTTACATTTTGTCGATCTATGTACCTTTTATTTACTCGTGTTACATTTTGTCGATCTAAAATCATGGTTTCAAATTTGAAACTTTAAATATATTATTAAAAAATAATTTTTTAATAAAATATAAAATTTAAGTAATTTTAATAATTCCTAATGATTTGGGACTAAATAATAAAAGAAAATTATTTATGAGACAAGGGAAAAAGACATAGAGAAGAAAAGAACGCGGGCCGTTTTCGCTCGTCGGAAGAGAGAACAAAAATCGGAACTGCGATCAAATTATAATTTCGAAGGAGCGAAGGTAGAGTGAAAATGGCGGATGAGGAAGGCGAGCGGAGAGCNTAGCGCCGTATTTTGACAACGCGCGCCGTTGCGTCAAGTACGTTGATAAACATTTTAACGATTAAATCAAAAGAAAACCGTTACCGTTACCGTTAAATATTAAATGAAGGTAGCAATGATGGAATTAATGGAAAAGGTTTGTTTTGGGAATTTTATAAATGCATTATCTCAAACCAAATGAATAGTTTTAGTGTGATTTACTTATATATAAATAACCTAATAACGGATCCGGACATCTCTCACATTCCTTCCAACATTGTCATGTTATATATTCATCGCTTTTAAATAGAAAATTATTTCTATAGACTAACACGAACATCATCCTGGATCATTTATGTACCTTTTATTTATTCGTAAAATCATGGTTTCATTTTTTTTTGAAACTTTAAATGTATTATTAAAAAAATAATTTTTTAATAATAAAATATAAAATTTAAGTAATTTTAATAATTCCTAATGATTTGGGACTAAATAATAAAAGAAAATTATTTATGAGACAAGGGAAAAAGACATAGAAGAAAAGAACGCGGGCCGTTTTCGAACAAAAATCGGAACTGCGATCAAATTATAATTTCGAAGAAGCGAAGGTAGAGTGAAAATGGCGGATGAGGAAGGCGAGCGGAGATCTCCAGAAATTGCGTCAACTCCGTCGCTACAACCTAATTTCAAACCTAAACCTAAAGGAGTCACTCATGAGCAGCTCTCTAAATTTCAGGTTTTTTCCCCTTGATTTCCTACAGATTATGGCTTCATTGTTCTTTTCCTATTGGATTTACTTCTTAAGTTTCTGCCTTTTGGTTTTCAATACTTCACTTCGCTTCTTTTGCTTCCGATGATTTTCTGTGCAACTAACGAGAATATTCTAGTTTTCAATCTAAAGTCTTGCTCTTAAATTCATTGATTTAAAAAATTTTGTTGTTGCATTGGTAGGGTTAGAAAACCGCTCTTCCCATAGAAAGTTGTAATTTCTCTGGAATTATCTCCTTAAATAACATTCATGTTCTATTTGGTATTTTCTTCTTAGAAACCTACAAACTGTTGATAGAATGCCATGATCTGATGTGTTCTCTTCATCTTAATTCAAGGATGTGGTTTATGTAAAATGGATGGTTGAAGGCATTGCTTATTTTGTTAATCCATTATTCTTGCAGTTGAATTATTTGGGACAATTTCCTTGGTGCTTCCGACCCTCTTTGAATATCTCTGTTGGCAATTGAGTTTTCTAGCTTTCGGCCCCATTTCTATGGGAGGAGCTGAACTTAATTAGGTTTGTACCATCAGGCATATAAGATAGGAGTTAAGATCATTGTTTTAAGTGGCTTTTGTCACCAAAGAATTTTGAAACTACCTTTTTTCAAAAAATAAATAATTGTTACCAAGAGGAGAGAAGCTTCTTGGAAATGGAATTATGAAAGATACTTCTATACATATGGTAGTTGGAATAGCAATGGTAAATATTATTAGGCTAGATTATTAGTTGAATAGAAACGGCAGGTTTTCACTTGACTGGAGTTCCGGAATCAGAATTCAGTTAAAGAAAAGAGACAGTTAAAAACTTACCGGGACATTTTTTACTTACAGTTAAAGAGTCACTGCAAAATTACCGACGAGAGAAACCAATTACAAAAAGAAATAACTAGACAAGAACGGGGAATTATATGAGAGAGATAAGTATAAGTAATGAGCTTATATTATCAATTTAATACGACAGGAGCTTCACAGGAGGCGACTTCAGATAAAATCAAGGTCAAAGATAAGAAAGAATACGAAAGGTTTTTCTAATTTATTGCATTGTAGTGTAGTTTTTTGTTGTAAGCGTATGTTTTAATATTGAAGTCCTTGTTGGAAAAATAGGTTTGACTGGAAAATCTCAAATCAAGGATCTGAATACCATTGATGAAGTTACCGAAGTTGAACACTCGAGACTTTCCAGTTCTGATGTCGATTTTGGGGAAAAGAGCTCCCATGTTCAGCGAGATAACACAAAAACTACACTTCCATCCAAAAAGCTACACAAGTTACATTGGGGGTATGAGATATTATGA ACCCTCCAAATAAGATAATAAATATTTTATAAAAATAAAATAATAATTTTATTCTCTGAAACTCCAAAGAGTAAAGGATCCATTCGGCAATTCGCATCTAACTCCTCACTTCTCATCCCCAATTCAGATCTCTGCCGAATTTGATTCCGATTTCCGATTTCCAATTTCACAGAGCACAAATTAAGCAACGAATCTCTTAAATCTCCATCTCCCATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTGCCGTCACTGGTAGCCCCACCCGAAGTCCCACCGCTAGCCCCGTCATTCATCTTCGCCGCCGCCGCCGCAAAACCCTAAGAATGCTCCTCAATCGTACCGATCGCCGTCGATTTCCTTATCAAGACACCTCCGCCGATCCTCAAGATGTCGACGACGATGACGACGACGAGAATATGATTCCGGAAAAGAACGATAAGGAGGTACGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCGTCGCCGCCGCTCGAGGATAAGGTTTCCGATAGGCGAATCGAAGAACAGGAGGGACTGTTAACGGCGATTAACGCCAGCGCTGCCGGAATCGGTACGACCTCCACCACTCGCCGGTCCCTGAGACCGATATCGACTACATTTCGATACAGATTCCTCCGGCGAGCTTGGCGGCCTGTGCTCGTCGCGATTCCGGAGTAGAAGATGCTCCTCGCTGGTAAAATCTGGAAAAAGACATAGAGAAGAAAAGAACGCGGGCCGTTTTCGCTCGTCGGAAGAGAGAACAAAAATCGGAACTGCGATCAAATTATAATTTCGAAGGAGCGAAGGTAGAGTGAAAATGGCGGATGAGGAAGGCGAGCGGAGATCTCCAGAAATTGCGTCAACTCCGTCGCTACAACCTAATTTCAAACCTAAACCTAAAGGAGTCACTCATGAGCAGCTCTCTAAATTTCAGGAGCTTCACAGGAGGCGACTTCAGATAAAATCAAGGTCAAAGATAAGAAAGAATACGAAAGGTTTGACTGGAAAATCTCAAATCAAGGATCTGAATACCATTGATGAAGTTACCGAAGTTGAACACTCGAGACTTTCCAGTTCTGATGTCGATTTTGGGGAAAAGAGCTCCCATGTTCAGCGAGATAACACAAAAACTACACTTCCATCCAAAAAGCTACACAAGTTACATTGGGGGTATGAGATATTATGA ATGGCGGATGAGGAAGGCGAGCGGAGATCTCCAGAAATTGCGTCAACTCCGTCGCTACAACCTAATTTCAAACCTAAACCTAAAGGAGTCACTCATGAGCAGCTCTCTAAATTTCAGGAGCTTCACAGGAGGCGACTTCAGATAAAATCAAGGTCAAAGATAAGAAAGAATACGAAAGGTTTGACTGGAAAATCTCAAATCAAGGATCTGAATACCATTGATGAAGTTACCGAAGTTGAACACTCGAGACTTTCCAGTTCTGATGTCGATTTTGGGGAAAAGAGCTCCCATGTTCAGCGAGATAACACAAAAACTACACTTCCATCCAAAAAGCTACACAAGTTACATTGGGGGTATGAGATATTATGA MADEEGERRSPEIASTPSLQPNFKPKPKGVTHEQLSKFQELHRRRLQIKSRSKIRKNTKGLTGKSQIKDLNTIDEVTEVEHSRLSSSDVDFGEKSSHVQRDNTKTTLPSKKLHKLHWGYEIL
BLAST of Cp4.1LG01g25820 vs. TrEMBL
Match: A0A0A0LMI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G404820 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 8.6e-35 Identity = 87/117 (74.36%), Postives = 92/117 (78.63%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. TrEMBL
Match: A0A061EH30_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_019408 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.2e-17 Identity = 60/123 (48.78%), Postives = 75/123 (60.98%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. TrEMBL
Match: A0A067EV86_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032353mg PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 3.1e-16 Identity = 62/128 (48.44%), Postives = 77/128 (60.16%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. TrEMBL
Match: V4S8Z6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013056mg PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.8e-16 Identity = 61/125 (48.80%), Postives = 76/125 (60.80%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. TrEMBL
Match: D7TT13_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g02710 PE=4 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14 Identity = 58/125 (46.40%), Postives = 75/125 (60.00%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. TAIR10
Match: AT5G16160.1 (AT5G16160.1 unknown protein) HSP 1 Score: 57.0 bits (136), Expect = 9.4e-09 Identity = 44/118 (37.29%), Postives = 65/118 (55.08%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. NCBI nr
Match: gi|659081293|ref|XP_008441256.1| (PREDICTED: uncharacterized protein LOC103485441 isoform X1 [Cucumis melo]) HSP 1 Score: 156.4 bits (394), Expect = 3.2e-35 Identity = 90/117 (76.92%), Postives = 94/117 (80.34%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. NCBI nr
Match: gi|449441732|ref|XP_004138636.1| (PREDICTED: uncharacterized protein LOC101215509 isoform X3 [Cucumis sativus]) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34 Identity = 87/117 (74.36%), Postives = 92/117 (78.63%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. NCBI nr
Match: gi|778673071|ref|XP_011649921.1| (PREDICTED: uncharacterized protein LOC101215509 isoform X2 [Cucumis sativus]) HSP 1 Score: 142.9 bits (359), Expect = 3.7e-31 Identity = 88/144 (61.11%), Postives = 93/144 (64.58%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. NCBI nr
Match: gi|645279072|ref|XP_008244530.1| (PREDICTED: uncharacterized protein LOC103342672 [Prunus mume]) HSP 1 Score: 97.8 bits (242), Expect = 1.4e-17 Identity = 62/123 (50.41%), Postives = 76/123 (61.79%), Query Frame = 1
BLAST of Cp4.1LG01g25820 vs. NCBI nr
Match: gi|694352284|ref|XP_009357798.1| (PREDICTED: uncharacterized protein LOC103948490 [Pyrus x bretschneideri]) HSP 1 Score: 96.3 bits (238), Expect = 4.0e-17 Identity = 63/123 (51.22%), Postives = 75/123 (60.98%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|