Lsi03G000940 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G000940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Sister chromatid cohesion protein PDS5 like B-B
Location	chr03 : 1362720 .. 1368072 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAATCTACTTTTCATATGTAAAGGAGCCATCTATACAATTATTCCAACTTTCCCTCCCTTTTCTATTCGATTTCGCCCATTCCCATGCGATTCGGCGGGATCCTCTGCTTCCATGGACTTCAATTGAACTGAACCGTTCCCCATTCGAAATTCGAAGGATCTGAGAACTTAAGCTAAAAACCGAGCAACAATGGTGTCTCGGTCTTCCGACAAGGATGTCAAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCTTACTTCAGTTGAAGAACTTCTACCTCTTCTCGACGTAAGCCCTTCCGTTTTCTTCTCTATGTTTTTCAGCCGGTTGAATTTTCCGAGGGATTTTGTTTTACTGAATTGGCTTTTCAACCTGCTAGAATGCTGTCTTTGAATTTTCTTTTGCTATACCTTTCACGCTGATACTTAATATATCTGAAGCTTTAGATTTCAAGTAGCACAACTTAAATTAGAAGATAATTTGGTTTGCATCTATTCAAGTTTACTGGAATGATACTGTTGGATAGGCTGACATATTATAACTCCACATTGAGCTGGTGGCTGGCAATATCACTTTTGGTGGTCTGGAAAGTAATGCGAATGTCTGAAAACTGTTAAGGAGGGAATTGATTGAGATTATGTGAATGTTTGAAAACTAGTGAGGAGGGGATTACTTCGAGGAATGTGGATAATGGGTCCTAATGTAATGACGGTTCATGCTGTTAAGACTAGTCAGGCAGTTCAGTATCTCTTAAGATTTCTAACTGTGACTTTTAAATCTGTCTTTCAGTTTGATTCTTTGAACTGCACATTAAATGTTTAATGGGGTACTTTCCCACCTCATTTTTTTTTTTACCCTGCTAATGTAGTTATTCTCCCTCTTCTCTTCCCTTTCTTCTGGTGAGTTGAAATATAATGGAATATTAGCAGCTATGCCTTCTAGGTCCTTGGTATTTATTTACTTATTTATTTTTGTCTATATGGATTTTAATTTTTGTGGGTAGCACTTTTCATGTTTCTTTAACTTCACAATAATCTGCCTGATTGCAGAAAATTGAGAGTTTGCTGGCAAAAGTTGAACAATCCCCTTCAAAATCAGTGCAAATTGCGCTCACTCCATCACTGAAAGCCCTGGTTTCTGATCAGCTTCTAAAGCATTCGGATATTGATGTCAAAGTTTCAGTTGCTGCATGTATTAGTGAAATAACTAGGATCACTGCACCTGTTGCCCCTTACAGTGACGAACAAATGAAGGTAATTAGAAATTTGCTCTTTGAGTTGGTACAATGTCAATTTCCCACTTATCAAATTTACTTCTGAAGAGATGAATATATGCTGCTGTTCAGGAGGTGTTTCATCTTATAGTATCATCCTTTGAAGATCTCTCTGACAAGTCAAGTCGATCATATGCAAAGAGGGTATCGATTCTTGAAACCGTTGCAAAGGTCAGATCATGTGTGGTCATGCTGGATTTGGAATGTGATGCATTGATCATCGAGATGTTCCAACATTTCCTTAAGACAGTAAGGTATCATACTAGATTTTCTTTTGAAATCAAATTCCTTTTAAATTTTTACTTATAGGAGCACAGTTGTGATAACTATTAATTTTCCCACAATTCAAGTTCTTTTGTGAACAAATAGAATTTGTTTCTCAATGAAATACTACTTAGACTTCTGTACTTCATCAGAAATTGACTTATACCGGAGAACATGAGCAAAAAAAAGCAAAGTATGGATCATTATATTGGGTGTTTTGAATGATATATAGCAGTGGTATTTGAGTGCATTTGAAGGATTAGCAAGAAAAACTCGATTAAAAATATAATGCAGTGAATTAGTTGACTGTAATGTAATAAGTTTGGTTTTTAACTATTGTCTGTTAATTAGGTTTCATTTGTTGAATCCTTGTTAATTAGTGTCATGGGCTGGTAGTTGGGTTGGTTAGTAGGCAAACTTTAGAAATAAAGGAGTGTCGTTGTATTTTCAAGGCTTCTTATATGGAATAGAGTTTTCTTTGGTTGTTCCTGAGTTGTAGATGCTGCGCTGCACTAAGTTAGGTATTTCAGTGAGAAAAGGAAATGCTTGCAAGGATGGCAACAAGTAAGAATCTGGCTTTTATGGGAATGGAAAGTTCCTTTTTCTAGCTTTGCATGGTAGTGCTCATTCAGCACAGTCTCCTTCCTTTGGAGGATTTTCCTGACAACCATGACAACAAGAAGCATGGGAGGCTGCAAAGTATCACTCAAAATTTAACTCATCAGATTGATAGTAAGATTGCAAAAGGAAAAACTTTTGGATTTTGCCAAAAAATTTGAAAGTCGTAAAATTTTCAATGACTTGGAGTTCTTGATAGAGGCTTAGGCATTTGTGTTCAATAAATGAGAAATGATGCATGAGTTTGAATGTCTTCCTCATGGATATTCAAGTGTTGACCAAACTTCTGATTTTATCAGTACTCAAAGCATTCAAGTGAATGATTCTTAGGCAGCACTGGATTTTAAAAATAATTCAATTGGAGATGACACTTTAATGGAATGGGATGGAAAATATGGTTTATGTTCTGTGGATCATCTGCTGGAGCCACAATTCAGTGGATACAGTGTCTAATTCACAAGAAACCTCTCAGACTTGGACGGGGGAAGGAATTCTTTCTTTCCTTTGATGAATATGTTGGTGAAGATGAACATGAGATGCTGTCTGTTTAAGGAGAGTTCTCCATGAATTTTTATGAACCTTTTTCTGAAAAAGAGAGTTCTTGTCTTCGTATGTATGAGTTTCATTTGAAACAATCAAAGTTTTAGCTGTGATTTTTCATCCCCAACATTTTCCCAGCATGATAATTCAATGATGAATGATTTTGTCAACAAAGTTGACATAAGCAAAGAAGGATTTTCGATGGCTCTTTTGATGGGCTATCATGGAATCTTAGTCAGGAGCGTATTGGCTTTTTAAGTCTAATACATTGTATTTTATCAGTGCCCTACAAGCTTGGAAATCAAATTTATGGGCTGGTTGTTCCATAGAAAAATCCTTCAATCTTATACGCGTGTTTTAACAAGCTTATAAAAACATTAAGGTATTGATATAGTGAAATTTCAGCCTTTTGAGCTCTTTGTTTCCTATCTAGGCTTTTCTTCACATCTTAAGCTCAAGGACAGTACATTGGATTAGTTGGATAGCATTATAATAAGTTTTAGACTTTCAATTCTTTGGTTGTAGTTGATTAGTATTTTTAAATCACCACTTAGCCCAAAAAGCATAGGCGAACGGGTTATGATTAATTTAATTATATCAATACTTTAATAGCCTCCACTCGTGGGCATGAAAATTTGTAGAAGGTCCAACAAGTGAAATCAATATTAATTGGAGGGTGACATTACATGGGTTTGAACACATAACCTCCTGCTCTGATATCATGTTATTTTTGGAGTAAATCCTTTTTCTCCTTGTACAAAGAACCCAAGAATGGGTAAATATTATGCAACAAGTGAAATTCCTATTGGAAACTAATAATAAAAGGAAAAAAATAATTAAAAGATAAAACACTAATATTTTAATTTAAACACAAATCTACAATTTCAGTTGGTTGTTTATTGTGTTGGGCATACTTTTTGGTTTGGTTGAGTTGGTTGGAAGGGAACTTCCACAAATTGGGGGAATTGGGAGGGTCTATTGCATTTTCAACACTTCTTTGAACGGAATGGAGTTGCTTTAGTTGTTCTTAGTCTAGATGCTTGGCTGCATTAAAATACATGCACATAATTGTTATTTTGCAACATGTTGCCTATAATTGTTATTGGAATAGAGCTGCGAGCATAATGAGCGATAAAAATCTGATAGGAGGTTAAGCATAAGTTCATAACTTGTAATGATGTCTTGACATATTGCTCGCTGTGCCAATTCTTTTAATTAGTTGCTGATAATTTGAAGTTAAGATGACAGCAGTAACAATAGCTCTTTCCTGGTGTTCGCAGAGTAAAAGTTGATGTGATTGATATTTATAATGGCAAGTGAAAGATTTACAAAAGCAAATTTCTGATACTCAAAACAATGTTTTTGGCAATTAATTTCTGATTAAACAGTCCACCGAACTTTCTCTGATTTGATCTCATTTAGGTCTAGCATTTTCCTTCTGATAGTTTGCTTCTATTTTTTCCTAATAGTTTAGTTGAACACCTTTATTTTCCTTTTTGTTCTTGTTCTGATTAGTGAGGACTTAGCAGGTTTTATTTTGCCAAGTTGGAAGTTCTAATTTTCGAAACTTTGGTTTCCAATATGTTGTTAAGTTTTTTAACAGTGTTCTTCACCCAGAGATTATCACCCAGAGAATATATTTGCATCAATGGAGACAATTATGAGCCTTGTTTTAGAAGAAAGTGAAGATAGGGCTGTAGGGCTCCTCTCTCCTATCTTAGAAAGTGTGAAGAGACAATGGGGTAATGTGCTTTGAGTTGTTATTTGTTCCCTTTCTCTCTCTCTTTTAATTATTAATATTTTCAACCTTGATTGTCTGTTGAATCTTATAACATGATTACAGGAAATTCTACCTATTGCTCGGAAATTAGGAGAGAGAGTTCTTGATAACTTTTCTACCAAACTCAAAGCTTATTTGGTTCAAGCTGTAAAGACCTCGGGAATTTCTTTTGATGATTATAGTGATGTTGTTGGTTCCATATACAAAGATCTTTCTGGCTCTGTTGAGCCTAGTAATCTTCACGATGATGGTGAAAACATGGTAAGTTCTTAAATAATTGTTAGTTGAGTATTTTTAACAATTTATTCTAAGGTTGTGGTGCTATTTAAGTCTTTTTAATAGTCCATCCCATTTGCGCACCTCCTAATGTTGAGCATTGTACAAATGAGATTCTATATCTGCTATGACTTGGTATCATTATAAAAATGAAGATCTGTAGGTCTTCTCTCCGTTATTTGCTGGGCAGACCAGTGATTAAAATCTTTTATAATATTTGCAACCGTGTCAAACGTTTATCCCATGCAAATCTGCCATGGATACAATCTTTGATTCCCATGTTTAAAATTTATAGGATACGTGATTTGCTATATTGAATTTTCTATGAGTTTCTGTATTATAGAGGTTGGGTTTTTTTAGCTTGAGATTCTGGTTGTTGAAATATTATTCAATGCCCAAGGGTCAGCATATAAGATAAATTTAACCTCGGCGGAAGTGATCTTTATGTGATTATGACATCTTCTTTTGAATTTGAATTTTATGTAATGGTTTTTGCATTTTTCTCTGTTGATACTTTGTGCAGGTTGCTGAGACCATGTCAGCTAGAACGTATGAGGATGAGGAAATGCAACCATGCAATGCTTCTTAA

mRNA sequence

ACCCAATCTACTTTTCATATGTAAAGGAGCCATCTATACAATTATTCCAACTTTCCCTCCCTTTTCTATTCGATTTCGCCCATTCCCATGCGATTCGGCGGGATCCTCTGCTTCCATGGACTTCAATTGAACTGAACCGTTCCCCATTCGAAATTCGAAGGATCTGAGAACTTAAGCTAAAAACCGAGCAACAATGGTGTCTCGGTCTTCCGACAAGGATGTCAAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCTTACTTCAGTTGAAGAACTTCTACCTCTTCTCGACTTATTCTCCCTCTTCTCTTCCCTTTCTTCTGGTGAGTTGAAATATAATGGAATATTAGCAGCTATGCCTTCTAGGTCCTTGAAAATTGAGAGTTTGCTGGCAAAAGTTGAACAATCCCCTTCAAAATCAGTGCAAATTGCGCTCACTCCATCACTGAAAGCCCTGGTTTCTGATCAGCTTCTAAAGCATTCGGATATTGATGTCAAAGTTTCAGTTGCTGCATGTATTAGTGAAATAACTAGGATCACTGCACCTGTTGCCCCTTACAGTGACGAACAAATGAAGGAGGTGTTTCATCTTATAGTATCATCCTTTGAAGATCTCTCTGACAAGTCAAGTCGATCATATGCAAAGAGGGTATCGATTCTTGAAACCGTTGCAAAGGTCAGATCATGTGTGGTCATGCTGGATTTGGAATGTGATGCATTGATCATCGAGATGTTCCAACATTTCCTTAAGACAGAAATTCTACCTATTGCTCGGAAATTAGGAGAGAGAGTTCTTGATAACTTTTCTACCAAACTCAAAGCTTATTTGGTTCAAGCTGTAAAGACCTCGGGAATTTCTTTTGATGATTATAGTGATGTTGTTGGTTCCATATACAAAGATCTTTCTGGCTCTGTTGAGCCTAGTAATCTTCACGATGATGGTGAAAACATGGTTGCTGAGACCATGTCAGCTAGAACGTATGAGGATGAGGAAATGCAACCATGCAATGCTTCTTAA

Coding sequence (CDS)

ATGGTGTCTCGGTCTTCCGACAAGGATGTCAAAGAACAGCTTTTGGAAGCTGGCAATAAGATTGTTGACCCCCTTACTTCAGTTGAAGAACTTCTACCTCTTCTCGACTTATTCTCCCTCTTCTCTTCCCTTTCTTCTGGTGAGTTGAAATATAATGGAATATTAGCAGCTATGCCTTCTAGGTCCTTGAAAATTGAGAGTTTGCTGGCAAAAGTTGAACAATCCCCTTCAAAATCAGTGCAAATTGCGCTCACTCCATCACTGAAAGCCCTGGTTTCTGATCAGCTTCTAAAGCATTCGGATATTGATGTCAAAGTTTCAGTTGCTGCATGTATTAGTGAAATAACTAGGATCACTGCACCTGTTGCCCCTTACAGTGACGAACAAATGAAGGAGGTGTTTCATCTTATAGTATCATCCTTTGAAGATCTCTCTGACAAGTCAAGTCGATCATATGCAAAGAGGGTATCGATTCTTGAAACCGTTGCAAAGGTCAGATCATGTGTGGTCATGCTGGATTTGGAATGTGATGCATTGATCATCGAGATGTTCCAACATTTCCTTAAGACAGAAATTCTACCTATTGCTCGGAAATTAGGAGAGAGAGTTCTTGATAACTTTTCTACCAAACTCAAAGCTTATTTGGTTCAAGCTGTAAAGACCTCGGGAATTTCTTTTGATGATTATAGTGATGTTGTTGGTTCCATATACAAAGATCTTTCTGGCTCTGTTGAGCCTAGTAATCTTCACGATGATGGTGAAAACATGGTTGCTGAGACCATGTCAGCTAGAACGTATGAGGATGAGGAAATGCAACCATGCAATGCTTCTTAA

Protein sequence

MVSRSSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKIESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQHFLKTEILPIARKLGERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKDLSGSVEPSNLHDDGENMVAETMSARTYEDEEMQPCNAS

Homology

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BLAST of Lsi03G000940 vs. Swiss-Prot
Match: PDS5_YEAST (Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDS5 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.8e-12
Identity = 38/99 (38.38%), Postives = 65/99 (65.66%), Query Frame = 1


Query: 90  ALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVSSFEDLSDKSS 149
           ALVS +LLKH D+ ++   A C+S+I R+ AP APY+D Q+ ++F L++S FE L D+ +
Sbjct: 58  ALVSRKLLKHKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQEN 117

Query: 150 RSYAKRVSILETVAKVRSCVVMLDL-ECDALIIEMFQHF 188
             + ++  ++  + + RS V++ DL   + L+IE+F  F
Sbjct: 118 GYHIQQTYLITKLLEYRSIVLLADLPSSNNLLIELFHIF 156

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BLAST of Lsi03G000940 vs. Swiss-Prot
Match: PD5BB_XENLA (Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis GN=pds5b-b PE=2 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 35/97 (36.08%), Postives = 59/97 (60.82%), Query Frame = 1


Query: 91  LVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY-SDEQMKEVFHLIVSSFEDLSDKSS 150
           L SD  LKH D DV++ VA C+++I RI AP APY S +++K++F  I    + L D  S
Sbjct: 63  LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKS 122

Query: 151 RSYAKRVSILETVAKVRSCVVMLDLE-CDALIIEMFQ 186
             + +   +LE +A V+S  +  +LE C+ +  ++++
Sbjct: 123 PQFNRYFYLLENIAWVKSYNICFELEDCNEIFTQLYR 159

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BLAST of Lsi03G000940 vs. Swiss-Prot
Match: PDS5_SCHPO (Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pds5 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.9e-08
Identity = 48/200 (24.00%), Postives = 93/200 (46.50%), Query Frame = 1


Query: 23  DPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKIESLLAKVEQSPSKSVQI 82
           +PLT+ E L  L DL    +SLS   +  + +L                           
Sbjct: 16  NPLTTSEILKRLRDLLGELTSLSQDTIDRDSVL--------------------------- 75

Query: 83  ALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVSSFE 142
              P  ++LV++ LL H D  ++     CI E+ R+ AP AP++  Q++++F +I+    
Sbjct: 76  ---PVARSLVNNNLLHHKDKGIRSYTLCCIVELLRLCAPDAPFTLSQLEDIFQVILKILS 135

Query: 143 DLSDKSSRSYAKRVSILETVAKVRSCVVMLDL-ECDALIIEMFQHFLKTEILPIARKLGE 202
            L ++ S  Y +   ILE+++ V+S V+++DL   +  ++ +F+ F       +ARK   
Sbjct: 136 GLMNQESTYYPQIYEILESLSNVKSAVLIVDLPNAEEFLVNIFRLF-----FDLARKGTT 180

Query: 203 RVLDNFSTKLKAYLVQAVKT 222
           + ++ +   +   L+  + T
Sbjct: 196 KNVEFYMLDIINQLINEINT 180

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BLAST of Lsi03G000940 vs. Swiss-Prot
Match: PD5BA_XENLA (Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis GN=pds5b-a PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.7e-08
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 1


Query: 91  LVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY-SDEQMKEVFHLIVSSFEDLSDKSS 150
           L SD  LKH D DV++ VA C+++I RI AP APY S +++K++F  I    + L D  S
Sbjct: 63  LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKS 122

Query: 151 RSYAKRVSILETVAKVRSCVVMLDLE 176
             + +   +LE +A V+S  +  +LE
Sbjct: 123 PQFNRYFYLLENIAWVKSYNICFELE 148

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BLAST of Lsi03G000940 vs. Swiss-Prot
Match: PDS5B_RAT (Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus GN=Pds5b PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 1


Query: 72  VEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY-SDEQM 131
           ++Q   +  ++ L  +L  L SD  LKH D DV++ VA C+++I RI AP APY S +++
Sbjct: 45  MDQDSEEEKELYLNLALH-LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKL 104

Query: 132 KEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLE 176
           K++F  I    + L D  S  + +   +LE +A V+S  +  +LE
Sbjct: 105 KDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELE 148

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BLAST of Lsi03G000940 vs. TrEMBL
Match: A0A0A0LM52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382630 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-65
Identity = 148/186 (79.57%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIV+P TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVEPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLAKVEQSPS S+QIALTPSLKALVSDQLL+HS+IDVKVSVAACISEITRITAP AP
Sbjct: 63  IESLLAKVEQSPSISMQIALTPSLKALVSDQLLRHSNIDVKVSVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           YSD+QMKEVFHLIVSSFEDLSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YSDDQMKEVFHLIVSSFEDLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 161

Query: 185 QHFLKT 191
           QHFLKT
Sbjct: 183 QHFLKT 161

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BLAST of Lsi03G000940 vs. TrEMBL
Match: R0FAW8_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10007511mg PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 3.6e-57
Identity = 142/274 (51.82%), Postives = 171/274 (62.41%), Query Frame = 1


Query: 6   SDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKI 65
           SDK+++ Q+LEAG K+VDP +SV+ELL LLD                           K+
Sbjct: 4   SDKELENQILEAGVKLVDPPSSVDELLALLD---------------------------KL 63

Query: 66  ESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY 125
              L++VEQSP  S+Q AL+P +KALV  +L KH D  VKV+VAACISEITRITAP APY
Sbjct: 64  FLCLSEVEQSPPDSMQNALSPLMKALVGGKLFKHLDAQVKVAVAACISEITRITAPDAPY 123

Query: 126 SDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQ 185
            DEQMKEVF LIVSSFEDL DKSSRSY KR+SILETVAKVRSCVVMLDLECDAL+IEMFQ
Sbjct: 124 DDEQMKEVFKLIVSSFEDLVDKSSRSYPKRISILETVAKVRSCVVMLDLECDALLIEMFQ 183

Query: 186 HFLKT-------------------------------------------EILPIARKLGER 237
           HFLK+                                           E+  ++R+L E+
Sbjct: 184 HFLKSIRDHHSGNVFSSMENIMTLVLEESEEIPSEMLTPILHYVKKDDEVSQVSRRLAEK 243

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BLAST of Lsi03G000940 vs. TrEMBL
Match: V7AXI5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G087800g PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 5.3e-56
Identity = 134/239 (56.07%), Postives = 166/239 (69.46%), Query Frame = 1


Query: 1   MVSRSSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPS 60
           M + ++DK+++EQLLEAGNK+ DP +SVEELL LLD                        
Sbjct: 1   MATTTTDKELEEQLLEAGNKLADPPSSVEELLSLLD------------------------ 60

Query: 61  RSLKIESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITA 120
              ++ES L++VEQSPS S+QIAL+PSLKAL++D+LL+HSD DVKV+VA+CISEITRITA
Sbjct: 61  ---QVESFLSRVEQSPSNSMQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITA 120

Query: 121 PVAPYSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALI 180
           P APY D+QMKEVF +IVSSFE+L DK SRSYAKR SILETVAKVRSCVVMLDLECDALI
Sbjct: 121 PEAPYDDDQMKEVFQVIVSSFENLHDKLSRSYAKRTSILETVAKVRSCVVMLDLECDALI 180

Query: 181 IEMFQHFLKTEILPIARKLGERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKD 240
           +EMFQHF K     I     E V  +  T +   L +   +  IS D  S ++ ++ KD
Sbjct: 181 LEMFQHFFKA----IREHHPENVFSSMETIMTLVLEE---SEDISLDLLSTLLATVKKD 205

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BLAST of Lsi03G000940 vs. TrEMBL
Match: V4WB02_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007391mg PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 125/185 (67.57%), Postives = 147/185 (79.46%), Query Frame = 1


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDK++++QL++AGNK+++P  SV+ELLPLLD                           +
Sbjct: 3   SSDKELEQQLMDAGNKLLEPPDSVDELLPLLD---------------------------Q 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           +ES L++VEQSP+KS+Q ALTPS KALV+DQL  HSD+DVKV+VAACISEITRITAP AP
Sbjct: 63  VESYLSRVEQSPTKSMQNALTPSQKALVADQLFGHSDVDVKVAVAACISEITRITAPEAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y D+QMKEVF LIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECDALIIEMF
Sbjct: 123 YEDDQMKEVFQLIVSSFENLSDKSSRSYAKRTSILETVAKVRSCVVMLDLECDALIIEMF 160

Query: 185 QHFLK 190
           QHFL+
Sbjct: 183 QHFLE 160

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BLAST of Lsi03G000940 vs. TrEMBL
Match: A0A067FW91_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047736mg PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55
Identity = 125/185 (67.57%), Postives = 147/185 (79.46%), Query Frame = 1


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDK++++QL++AGNK+++P  SV+ELLPLLD                           +
Sbjct: 3   SSDKELEQQLMDAGNKLLEPPDSVDELLPLLD---------------------------Q 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           +ES L++VEQSP+KS+Q ALTPS KALV+DQL  HSD+DVKV+VAACISEITRITAP AP
Sbjct: 63  VESYLSRVEQSPTKSMQNALTPSQKALVADQLFGHSDVDVKVAVAACISEITRITAPEAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y D+QMKEVF LIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECDALIIEMF
Sbjct: 123 YEDDQMKEVFQLIVSSFENLSDKSSRSYAKRTSILETVAKVRSCVVMLDLECDALIIEMF 160

Query: 185 QHFLK 190
           QHFL+
Sbjct: 183 QHFLE 160

[Close]

BLAST of Lsi03G000940 vs. TAIR10
Match: AT4G31880.1 (AT4G31880.1 LOCATED IN: cytosol, chloroplast)

HSP 1 Score: 207.6 bits (527), Expect = 9.8e-54
Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 1


Query: 6   SDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKI 65
           SDK+++ Q++EAG K++DP +S++ELL  LD   LF SL                     
Sbjct: 4   SDKELENQIIEAGEKLIDPPSSLDELLSFLD--KLFVSL--------------------- 63

Query: 66  ESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY 125
               A+VEQSP  S+Q ALTP +K LV  +L KHSD+DVKV+VAACISEITRITAP APY
Sbjct: 64  ----AEVEQSPPDSMQNALTPLMKGLVGGKLFKHSDVDVKVAVAACISEITRITAPDAPY 123

Query: 126 SDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQ 185
            D+QMKEVF LIVSSFEDL DKSSRSYAKR+SILETVAKVRSCVVMLDLECDAL+IEMFQ
Sbjct: 124 DDDQMKEVFKLIVSSFEDLVDKSSRSYAKRISILETVAKVRSCVVMLDLECDALLIEMFQ 160

Query: 186 HFLK 190
           HFLK
Sbjct: 184 HFLK 160

[Close]

BLAST of Lsi03G000940 vs. TAIR10
Match: AT1G15940.1 (AT1G15940.1 Tudor/PWWP/MBT superfamily protein)

HSP 1 Score: 147.9 bits (372), Expect = 9.2e-36
Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 1


Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           +ESLLA VEQ  S SVQ AL P ++ALVS  LL++ D DV+VSV +C++EI RITAP AP
Sbjct: 40  MESLLATVEQDLSSSVQKALHPPMRALVSADLLRNPDSDVRVSVVSCLTEIMRITAPEAP 99

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMK++F + + +FE L+D SSRSY K   ILETVAKVRS +VMLDLECD L++EMF
Sbjct: 100 YNDEQMKDIFQVTIEAFEKLADASSRSYRKAEVILETVAKVRSSLVMLDLECDDLVLEMF 159

Query: 185 QHFLK 190
           Q FLK
Sbjct: 160 QRFLK 164

[Close]

BLAST of Lsi03G000940 vs. TAIR10
Match: AT5G47690.3 (AT5G47690.3 binding)

HSP 1 Score: 131.7 bits (330), Expect = 6.8e-31
Identity = 70/120 (58.33%), Postives = 91/120 (75.83%), Query Frame = 1


Query: 69  LAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDE 128
           L+++EQSP  +V  ++ P L A++  ++L H D DVK+ VA+C+SEITRITAP APYSD 
Sbjct: 37  LSELEQSPPPAVLKSIQPFLDAVIKPEILNHQDKDVKLLVASCVSEITRITAPEAPYSDN 96

Query: 129 QMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQHFL 188
            MK++F LIVS+F  L+D S  S+ +RV ILETVAK RSCVVMLDLECD L+ E+F  FL
Sbjct: 97  IMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAKYRSCVVMLDLECDDLVKEVFTTFL 156

[Close]

BLAST of Lsi03G000940 vs. TAIR10
Match: AT1G80810.2 (AT1G80810.2 Tudor/PWWP/MBT superfamily protein)

HSP 1 Score: 125.6 bits (314), Expect = 4.9e-29
Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 1


Query: 80  VQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPYSDEQMKEVFHLIVS 139
           +Q AL PS  ALVS  LL H D DV+VSV +C++EI RITAP  PYSD+ MKE+F L + 
Sbjct: 1   MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60

Query: 140 SFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQHFLK 190
           +FE L+D SSRSY K   +L+ VAKV+SC+VMLDLEC  LI++MF++F K
Sbjct: 61  AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFK 110

[Close]

BLAST of Lsi03G000940 vs. TAIR10
Match: AT1G77600.3 (AT1G77600.3 ARM repeat superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.6e-19
Identity = 48/124 (38.71%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 64  KIESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVA 123
           KI+   A  ++   K ++  L P  K+++   LLK+ D DV + V  C+SE+ RI AP  
Sbjct: 40  KIDQPSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLVTVCVSELFRILAPHL 99

Query: 124 PYSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEM 183
           P+ DE ++++F L ++ F +LSD  S  ++KR  ILETV++++ C++MLD +C  L+ EM
Sbjct: 100 PFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDCQDLVHEM 159

Query: 184 FQHF 188
           F  F
Sbjct: 160 FNMF 163

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: gi|778672647|ref|XP_011649845.1| (PREDICTED: muscle M-line assembly protein unc-89 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 3.1e-65
Identity = 148/186 (79.57%), Postives = 154/186 (82.80%), Query Frame = 1


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIV+P TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVEPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLAKVEQSPS S+QIALTPSLKALVSDQLL+HS+IDVKVSVAACISEITRITAP AP
Sbjct: 63  IESLLAKVEQSPSISMQIALTPSLKALVSDQLLRHSNIDVKVSVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           YSD+QMKEVFHLIVSSFEDLSDKSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YSDDQMKEVFHLIVSSFEDLSDKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 161

Query: 185 QHFLKT 191
           QHFLKT
Sbjct: 183 QHFLKT 161

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: gi|659088976|ref|XP_008445261.1| (PREDICTED: dentin sialophosphoprotein [Cucumis melo])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 146/186 (78.49%), Postives = 153/186 (82.26%), Query Frame = 1


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDKDV+EQLLEAGNKIVDP TSVEELLPLLD                           K
Sbjct: 3   SSDKDVEEQLLEAGNKIVDPPTSVEELLPLLD---------------------------K 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           IESLLAKVEQSPS S+Q+ALTPSLKALVSDQLL+HSDIDVKVSVAACISEITRITAP AP
Sbjct: 63  IESLLAKVEQSPSISMQVALTPSLKALVSDQLLRHSDIDVKVSVAACISEITRITAPDAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y+DEQMKEVFHLIVSSFE+LS+KSSRSYAKR SILETVAKVRSCVVMLDLECD LIIEMF
Sbjct: 123 YNDEQMKEVFHLIVSSFENLSEKSSRSYAKRASILETVAKVRSCVVMLDLECDGLIIEMF 161

Query: 185 QHFLKT 191
           QHF KT
Sbjct: 183 QHFFKT 161

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: gi|565451279|ref|XP_006285983.1| (hypothetical protein CARUB_v10007511mg [Capsella rubella])

HSP 1 Score: 229.9 bits (585), Expect = 5.2e-57
Identity = 142/274 (51.82%), Postives = 171/274 (62.41%), Query Frame = 1


Query: 6   SDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLKI 65
           SDK+++ Q+LEAG K+VDP +SV+ELL LLD                           K+
Sbjct: 4   SDKELENQILEAGVKLVDPPSSVDELLALLD---------------------------KL 63

Query: 66  ESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAPY 125
              L++VEQSP  S+Q AL+P +KALV  +L KH D  VKV+VAACISEITRITAP APY
Sbjct: 64  FLCLSEVEQSPPDSMQNALSPLMKALVGGKLFKHLDAQVKVAVAACISEITRITAPDAPY 123

Query: 126 SDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMFQ 185
            DEQMKEVF LIVSSFEDL DKSSRSY KR+SILETVAKVRSCVVMLDLECDAL+IEMFQ
Sbjct: 124 DDEQMKEVFKLIVSSFEDLVDKSSRSYPKRISILETVAKVRSCVVMLDLECDALLIEMFQ 183

Query: 186 HFLKT-------------------------------------------EILPIARKLGER 237
           HFLK+                                           E+  ++R+L E+
Sbjct: 184 HFLKSIRDHHSGNVFSSMENIMTLVLEESEEIPSEMLTPILHYVKKDDEVSQVSRRLAEK 243

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: gi|593269550|ref|XP_007136952.1| (hypothetical protein PHAVU_009G087800g [Phaseolus vulgaris])

HSP 1 Score: 226.1 bits (575), Expect = 7.6e-56
Identity = 134/239 (56.07%), Postives = 166/239 (69.46%), Query Frame = 1


Query: 1   MVSRSSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPS 60
           M + ++DK+++EQLLEAGNK+ DP +SVEELL LLD                        
Sbjct: 1   MATTTTDKELEEQLLEAGNKLADPPSSVEELLSLLD------------------------ 60

Query: 61  RSLKIESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITA 120
              ++ES L++VEQSPS S+QIAL+PSLKAL++D+LL+HSD DVKV+VA+CISEITRITA
Sbjct: 61  ---QVESFLSRVEQSPSNSMQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITA 120

Query: 121 PVAPYSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALI 180
           P APY D+QMKEVF +IVSSFE+L DK SRSYAKR SILETVAKVRSCVVMLDLECDALI
Sbjct: 121 PEAPYDDDQMKEVFQVIVSSFENLHDKLSRSYAKRTSILETVAKVRSCVVMLDLECDALI 180

Query: 181 IEMFQHFLKTEILPIARKLGERVLDNFSTKLKAYLVQAVKTSGISFDDYSDVVGSIYKD 240
           +EMFQHF K     I     E V  +  T +   L +   +  IS D  S ++ ++ KD
Sbjct: 181 LEMFQHFFKA----IREHHPENVFSSMETIMTLVLEE---SEDISLDLLSTLLATVKKD 205

[Close]

BLAST of Lsi03G000940 vs. NCBI nr
Match: gi|641848604|gb|KDO67481.1| (hypothetical protein CISIN_1g047736mg [Citrus sinensis])

HSP 1 Score: 224.9 bits (572), Expect = 1.7e-55
Identity = 125/185 (67.57%), Postives = 147/185 (79.46%), Query Frame = 1


Query: 5   SSDKDVKEQLLEAGNKIVDPLTSVEELLPLLDLFSLFSSLSSGELKYNGILAAMPSRSLK 64
           SSDK++++QL++AGNK+++P  SV+ELLPLLD                           +
Sbjct: 3   SSDKELEQQLMDAGNKLLEPPDSVDELLPLLD---------------------------Q 62

Query: 65  IESLLAKVEQSPSKSVQIALTPSLKALVSDQLLKHSDIDVKVSVAACISEITRITAPVAP 124
           +ES L++VEQSP+KS+Q ALTPS KALV+DQL  HSD+DVKV+VAACISEITRITAP AP
Sbjct: 63  VESYLSRVEQSPTKSMQNALTPSQKALVADQLFGHSDVDVKVAVAACISEITRITAPEAP 122

Query: 125 YSDEQMKEVFHLIVSSFEDLSDKSSRSYAKRVSILETVAKVRSCVVMLDLECDALIIEMF 184
           Y D+QMKEVF LIVSSFE+LSDKSSRSYAKR SILETVAKVRSCVVMLDLECDALIIEMF
Sbjct: 123 YEDDQMKEVFQLIVSSFENLSDKSSRSYAKRTSILETVAKVRSCVVMLDLECDALIIEMF 160

Query: 185 QHFLK 190
           QHFL+
Sbjct: 183 QHFLE 160

The following BLAST results are available for this feature:

BLAST of Lsi03G000940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PDS5_YEAST	1.8e-12	38.38	Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae (strain ATCC ...	[more]
PD5BB_XENLA	1.5e-08	36.08	Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis GN=pds5b-b ...	[more]
PDS5_SCHPO	5.9e-08	24.00	Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
PD5BA_XENLA	7.7e-08	39.53	Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis GN=pds5b-a ...	[more]
PDS5B_RAT	1.3e-07	35.24	Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus GN=Pds5b P...	[more]

BLAST of Lsi03G000940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM52_CUCSA	2.1e-65	79.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G382630 PE=4 SV=1	[more]
R0FAW8_9BRAS	3.6e-57	51.82	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10007511mg PE=4 SV=1	[more]
V7AXI5_PHAVU	5.3e-56	56.07	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G087800g PE=4 SV=1	[more]
V4WB02_9ROSI	1.2e-55	67.57	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007391mg PE=4 SV=1	[more]
A0A067FW91_CITSI	1.2e-55	67.57	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047736mg PE=4 SV=1	[more]

BLAST of Lsi03G000940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G31880.1	9.8e-54	64.67	LOCATED IN: cytosol, chloroplast	[more]
AT1G15940.1	9.2e-36	64.00	Tudor/PWWP/MBT superfamily protein	[more]
AT5G47690.3	6.8e-31	58.33	binding	[more]
AT1G80810.2	4.9e-29	59.09	Tudor/PWWP/MBT superfamily protein	[more]
AT1G77600.3	4.6e-19	38.71	ARM repeat superfamily protein	[more]

BLAST of Lsi03G000940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778672647\|ref\|XP_011649845.1\|	3.1e-65	79.57	PREDICTED: muscle M-line assembly protein unc-89 [Cucumis sativus]	[more]
gi\|659088976\|ref\|XP_008445261.1\|	1.2e-64	78.49	PREDICTED: dentin sialophosphoprotein [Cucumis melo]	[more]
gi\|565451279\|ref\|XP_006285983.1\|	5.2e-57	51.82	hypothetical protein CARUB_v10007511mg [Capsella rubella]	[more]
gi\|593269550\|ref\|XP_007136952.1\|	7.6e-56	56.07	hypothetical protein PHAVU_009G087800g [Phaseolus vulgaris]	[more]
gi\|641848604\|gb\|KDO67481.1\|	1.7e-55	67.57	hypothetical protein CISIN_1g047736mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G000940.1	Lsi03G000940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12663	ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED	coord: 64..271 score: 4.8E-105coord: 1..36 score: 4.8E
None	No IPR available	PANTHER	PTHR12663:SF3	ASPARTYL BETA-HYDROXYLASE N-TERMINAL REGION DOMAIN-CONTAINING PROTEIN-RELATED	coord: 64..271 score: 4.8E-105coord: 1..36 score: 4.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G000940	CSPI01G14370	Wild cucumber (PI 183967)	cpilsiB046
Lsi03G000940	MELO3C004787	Melon (DHL92) v3.5.1	lsimeB244
Lsi03G000940	MELO3C004787.2	Melon (DHL92) v3.6.1	lsimedB255
Lsi03G000940	CsaV3_1G014540	Cucumber (Chinese Long) v3	cuclsiB048

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G000940	Bottle gourd (USVL1VR-Ls)	lsilsiB042
Lsi03G000940	Cucumber (Gy14) v1	cgylsiB343
Lsi03G000940	Cucurbita maxima (Rimu)	cmalsiB168
Lsi03G000940	Cucurbita maxima (Rimu)	cmalsiB212
Lsi03G000940	Cucurbita moschata (Rifu)	cmolsiB158
Lsi03G000940	Cucurbita moschata (Rifu)	cmolsiB203
Lsi03G000940	Cucurbita pepo (Zucchini)	cpelsiB428
Lsi03G000940	Cucurbita pepo (Zucchini)	cpelsiB429
Lsi03G000940	Cucurbita pepo (Zucchini)	cpelsiB670
Lsi03G000940	Cucumber (Chinese Long) v2	culsiB044
Lsi03G000940	Watermelon (Charleston Gray)	lsiwcgB231
Lsi03G000940	Watermelon (Charleston Gray)	lsiwcgB234
Lsi03G000940	Watermelon (97103) v1	lsiwmB270
Lsi03G000940	Watermelon (97103) v1	lsiwmB246
Lsi03G000940	Watermelon (97103) v1	lsiwmB260
Lsi03G000940	Cucumber (Gy14) v2	cgyblsiB041
Lsi03G000940	Watermelon (97103) v2	lsiwmbB217
Lsi03G000940	Watermelon (97103) v2	lsiwmbB227
Lsi03G000940	Wax gourd	lsiwgoB337