Lsi03G000770 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G000770
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Fatty acyl-CoA reductase 3
Location	chr03 : 1073874 .. 1075721 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCTCATGCGAGCCAGCCGTCGTCTTACGCTATTTATCATGTGAGTTCTTCCATGAGAAATCCAGTGTTGTATGGAAAGCTTCAAGAGTATGGCTTTCATTACTTTAGAGCAAACCCATGGATCAACAAGGATGGGCAGCCTGTTAGGGTTGGGAAAGTCACCATTTTGAATGACATGGCTAGCTTCCATAGATACATGACCATTCGATATTTGATATTTCTTAAGGTTTGTCTTCTATCATTATTATCACTAACTTTTGAGATGCTATCGAGTCTATTTTAGTCCTAATTTTTTTTTCTTTTGACATTATGTGGGGTGAAGGATTGAACCTCAAACTTCAAAGTTGATAGTACAAGTTTATGTCAGTTGAACTACGCTCATGTTGGCTTAGTTCCTCTAAAACTTAGAAGGATATTCACTACAAGTTGAATCATTAGTTTGTCGTTAATAGTAATAGTCTATCACTATGTATCACTAGTAGATAGTGACATTTTGCTATATTTGAAAATATTTACAGCAGTTTTGTCATTTAAAACAATTACCCAAATGAAAACCTTACTAAAGTTAAAGGAAAAATAATAGAGATTTAAAAAAAAAAATCTTAGAAAATAAAAAAAAAATGATCTCATTTTTTCAGAAATGATTCTCAAAATTTATAAACAAGAAATGAAAATTGATTATCAAATAAATTTGTTTCTTAAAAAATAAAAATTGAGAACGTAAAATATGGAACATAAATATTATGAAACAAGCCTATATTTTCAAATAAAAGATATTAGTTTCAAACCTTCATCTCTATAAGTTGTTAAACTAAAAAATTATTATATTTTATTAGGAAAATTACTATAAACTGAAAAAAAATATCAAACTATTTACAAATATAGAAAAATTTCACTGTCTAGGTAGACCGCGATAGAATTCTATCGCTTCGCAGTCTATCAATAAAAATTTTCAATATTCGTAACTAATTTGACTAATTTTTTTTTATATTTAAAAATATCCTAATTTATTATTCACATAATATCTTTGTGGGATACATTCGAATAATAACGAAAGCACTAATAATTTTAATTTATAAAAGAAGATTAAAATTCTATCTCTCTATTTATTTATTTATTTATTTTCTAATTTGATTTTCACAGGGATTGGAAGTTGTAAATACTGCACTTTGCCGTTACTTCGATGGAATGTTGTTCAATCTCGATCGTAAAATCAAATATGTTCTGCGATTAGTCGACCTCTATGGCCCTTTCTTGTTCTTCAAAGGAGTGTATGTACTCTCTCCACTACTCTTTTTATTTTTATTTTCCAAAATCAACTAAAAATGGAAAAGAAAGAATCAATTTGGTTTATAATTTAAAACTCTAAATTAATATCTATATCCATCCATACCATTTGCTTTTGGCTTTTAATTATACAAATTTCTTTTGAAAGCTACATCTAAAATCCCATTTGATAGTATGTATTTTCTTGAAAAACAAGATGGTTGATTACCTTCTCTCAAAAGTATTTTTATACACTATTTTGTTTGGATTGCTCCACTTTGAAAAAAGCTTATGTTATTGTCAAATTACTATAAAGAACAATTATTAAATATTATGAACTAATAGTTTTAAATTAAATTTGAGTGGTTAGTTGTTGGAGTCAGTCACAACCTAATAGTAAGTGGTTGTTAGGCCCATTCTTGATCGTTGGTCCTGGTCTACAATCACCAACTATCTCTAGTGAATGGTGACTAGAGACCAGGATCAACGATCAATGGTCAGTGACTGGGACCAAGACCATGGGCCAACAATTAGGGATTGGGATAGGAAACCAGCAACCGAAGTTGAGGACCGATGA

mRNA sequence

ATGGTAGCTCATGCGAGCCAGCCGTCGTCTTACGCTATTTATCATGTGAGTTCTTCCATGAGAAATCCAGTGTTGTATGGAAAGCTTCAAGAGTATGGCTTTCATTACTTTAGAGCAAACCCATGGATCAACAAGGATGGGCAGCCTGTTAGGGGATTGGAAGTTGTAAATACTGCACTTTGCCGTTACTTCGATGGAATGTTGTTCAATCTCGATCGTAAAATCAAATATGTTCTGCGATTAGTCGACCTCTATGGCCCTTTCTTGTTCTTCAAAGGAGTTGACTGGGACCAAGACCATGGGCCAACAATTAGGGATTGGGATAGGAAACCAGCAACCGAAGTTGAGGACCGATGA

Coding sequence (CDS)

ATGGTAGCTCATGCGAGCCAGCCGTCGTCTTACGCTATTTATCATGTGAGTTCTTCCATGAGAAATCCAGTGTTGTATGGAAAGCTTCAAGAGTATGGCTTTCATTACTTTAGAGCAAACCCATGGATCAACAAGGATGGGCAGCCTGTTAGGGGATTGGAAGTTGTAAATACTGCACTTTGCCGTTACTTCGATGGAATGTTGTTCAATCTCGATCGTAAAATCAAATATGTTCTGCGATTAGTCGACCTCTATGGCCCTTTCTTGTTCTTCAAAGGAGTTGACTGGGACCAAGACCATGGGCCAACAATTAGGGATTGGGATAGGAAACCAGCAACCGAAGTTGAGGACCGATGA

Protein sequence

MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGVDWDQDHGPTIRDWDRKPATEVEDR

Homology

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BLAST of Lsi03G000770 vs. Swiss-Prot
Match: FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 6.8e-14
Identity = 45/121 (37.19%), Postives = 61/121 (50.41%), Query Frame = 1


Query: 1   MVAHASQPSSYAI-YHVSSSMRNPVLYGKLQEYGFHYFRANPWINK------DGQ----- 60
           MVAHA+Q     + YHV SS  NP+    L E    YF  NPWIN        G+     
Sbjct: 323 MVAHANQRYVEPVTYHVGSSAANPMKLSALPEMAHRYFTKNPWINPDRNPVHVGRAMVFS 382

Query: 61  ---------------PVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKG 95
                          P++ LE+ NT  C++F G   +L RK + +LRLVD+Y P+LFF+G
Sbjct: 383 SFSTFHLYLTLNFLLPLKVLEIANTIFCQWFKGKYMDLKRKTRLLLRLVDIYKPYLFFQG 442

[Close]

BLAST of Lsi03G000770 vs. Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09
Identity = 33/117 (28.21%), Postives = 54/117 (46.15%), Query Frame = 1


Query: 4   HASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQ--------------- 63
           HA +  S  +YHV SS +NP+ + ++ +    YF  NP + +DG                
Sbjct: 325 HAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQ 384

Query: 64  -----------PVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                      P++ L ++      +      ++DRKIK  +RLVDLY P++ FKG+
Sbjct: 385 FSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKLAMRLVDLYRPYVLFKGI 441

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BLAST of Lsi03G000770 vs. Swiss-Prot
Match: FACR7_ARATH (Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.6e-08
Identity = 34/126 (26.98%), Postives = 58/126 (46.03%), Query Frame = 1


Query: 4   HASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPV--RGLEVVNTALC 63
           H     S+ +YHV SS +NPV+Y ++ E    YF  +P + ++G  +  +   +   A  
Sbjct: 252 HCHDSGSHTVYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVGRNGMLIVPKVTRISTLARF 311

Query: 64  RYFDGMLFNL----------------------DRKIKYVLRLVDLYGPFLFFKGVDWDQD 106
           R +  + + L                      +RK K  +RLV LY P++ FKG+ +D  
Sbjct: 312 RVYTNLRYKLPIQILGLLSVISLSQRDKFALHNRKFKMAMRLVKLYKPYVLFKGI-FDDK 371

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BLAST of Lsi03G000770 vs. Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.3e-08
Identity = 39/134 (29.10%), Postives = 58/134 (43.28%), Query Frame = 1


Query: 13  IYHVSSSMRNPVLYGKLQE------------------------------YGFHYFRANPW 72
           IYHV SS+RNP+   K  E                                FH +    +
Sbjct: 337 IYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRY 396

Query: 73  INKDGQPVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGVDWDQDHGP 117
           +      ++GLE+VN  LC+ F+      ++KI ++ RLVDLY P+LFF G+ +D  +  
Sbjct: 397 LIA----LKGLELVNIILCKLFEKEFQYFNKKINFIFRLVDLYQPYLFFYGI-FDDSNTE 456

[Close]

BLAST of Lsi03G000770 vs. Swiss-Prot
Match: FACR8_ARATH (Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.7e-07
Identity = 35/122 (28.69%), Postives = 57/122 (46.72%), Query Frame = 1


Query: 4   HASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQ--------------- 63
           HA     + +Y V SS +NP++YG+++E  F YF  N   +++G                
Sbjct: 326 HAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNSLRSRNGSMITVSKMKLIPTLAL 385

Query: 64  -----------PVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGVDWD 100
                      PV+ L++V+            N +RKI  V+RLV LY P++ FKG+  D
Sbjct: 386 FSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKIDMVMRLVKLYEPYVLFKGIFDD 445

[Close]

BLAST of Lsi03G000770 vs. TrEMBL
Match: W9R5G3_9ROSA (Fatty acyl-CoA reductase 3 OS=Morus notabilis GN=L484_022372 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 6.0e-25
Identity = 61/121 (50.41%), Postives = 77/121 (63.64%), Query Frame = 1


Query: 1   MVAHASQPSSY-AIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQP---------- 60
           + AHA+QPSS   IY V SS+RNPV Y  LQ+YGF YF   PWINKDG+P          
Sbjct: 322 IAAHANQPSSENVIYQVGSSVRNPVRYSNLQDYGFRYFSKKPWINKDGKPIKVRKVLVLG 381

Query: 61  ----------------VRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKG 95
                           ++GLE+VNTA C+YF GM  +L+RKI++V+RLV+LY P+LFFKG
Sbjct: 382 DMASFRRYMSVRYLLFLKGLELVNTAFCQYFQGMYLDLNRKIQFVMRLVELYRPYLFFKG 441

[Close]

BLAST of Lsi03G000770 vs. TrEMBL
Match: A0A072ULF3_MEDTR (Gland-specific fatty acyl-CoA reductase OS=Medicago truncatula GN=MTR_4g053785 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.8e-25
Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPV---------- 60
           +VAHA+ P++ AIYHV SS+R P++Y  LQE+GF +F+A P+INKDG+PV          
Sbjct: 322 IVAHANHPNNDAIYHVGSSIRRPLMYSDLQEFGFRHFKAKPYINKDGKPVKVGKVTVFSN 381

Query: 61  ----------------RGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                           +GLE+ NTALC+YF G   +L RKI+ V+RLVDLY P+LFFKGV
Sbjct: 382 MDSFSRFMFIRYLLMLKGLEIANTALCQYFKGTYLDLKRKIQIVMRLVDLYKPYLFFKGV 441

[Close]

BLAST of Lsi03G000770 vs. TrEMBL
Match: I1LRE5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G087400 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-24
Identity = 61/118 (51.69%), Postives = 72/118 (61.02%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPVR--------- 60
           MVAHA+ PS   IYHV SS+R P+ YG LQEYGF YF A P INKDG+PV+         
Sbjct: 324 MVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYFTAKPCINKDGRPVKVGKVTVLSN 383

Query: 61  -----------------GLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFK 93
                            GLE+ NTA C+YF G   NL+RKI+ V+RLVDLY P+LFFK
Sbjct: 384 MDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNLNRKIQIVMRLVDLYKPYLFFK 441

[Close]

BLAST of Lsi03G000770 vs. TrEMBL
Match: A0A0B2QI01_GLYSO (Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_006610 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-24
Identity = 61/118 (51.69%), Postives = 72/118 (61.02%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPVR--------- 60
           MVAHA+ PS   IYHV SS+R P+ YG LQEYGF YF A P INKDG+PV+         
Sbjct: 324 MVAHANHPSDDVIYHVGSSVRRPLRYGNLQEYGFRYFTAKPCINKDGRPVKVGKVTVLSN 383

Query: 61  -----------------GLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFK 93
                            GLE+ NTA C+YF G   NL+RKI+ V+RLVDLY P+LFFK
Sbjct: 384 MDSFRRYMFIRYLLVLKGLELANTAFCQYFQGTYLNLNRKIQIVMRLVDLYKPYLFFK 441

[Close]

BLAST of Lsi03G000770 vs. TrEMBL
Match: V7AJX1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G092500g PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-24
Identity = 56/117 (47.86%), Postives = 71/117 (60.68%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPV---------- 60
           M AHA++P+   IYHV SS+R P+ Y  LQ+YGF YF A PWINKDG PV          
Sbjct: 324 MAAHANRPTDDVIYHVGSSVRKPLRYNNLQDYGFRYFTAKPWINKDGSPVKVDKVTVLNN 383

Query: 61  ---------------RGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFK 93
                          +GLE+ NTA C+YF G   NL+RK++ V+RLVDLY P+LFF+
Sbjct: 384 MDSFRRYMFRYLLVLKGLEIANTAFCQYFQGTYLNLNRKVQIVMRLVDLYKPYLFFR 440

[Close]

BLAST of Lsi03G000770 vs. TAIR10
Match: AT3G44540.1 (AT3G44540.1 fatty acid reductase 4)

HSP 1 Score: 63.9 bits (154), Expect = 7.5e-11
Identity = 33/117 (28.21%), Postives = 54/117 (46.15%), Query Frame = 1


Query: 4   HASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQ--------------- 63
           HA +  S  +YHV SS +NP+ + ++ +    YF  NP + +DG                
Sbjct: 325 HAGKLGSQTVYHVGSSCKNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQ 384

Query: 64  -----------PVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                      P++ L ++      +      ++DRKIK  +RLVDLY P++ FKG+
Sbjct: 385 FSFYMTLRYKLPLQMLRLIYVIYPWWNGNKYKDIDRKIKLAMRLVDLYRPYVLFKGI 441

[Close]

BLAST of Lsi03G000770 vs. TAIR10
Match: AT5G22420.1 (AT5G22420.1 fatty acid reductase 7)

HSP 1 Score: 58.5 bits (140), Expect = 3.1e-09
Identity = 34/126 (26.98%), Postives = 58/126 (46.03%), Query Frame = 1


Query: 4   HASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPV--RGLEVVNTALC 63
           H     S+ +YHV SS +NPV+Y ++ E    YF  +P + ++G  +  +   +   A  
Sbjct: 252 HCHDSGSHTVYHVGSSNQNPVIYKQIYEMMSRYFMKSPLVGRNGMLIVPKVTRISTLARF 311

Query: 64  RYFDGMLFNL----------------------DRKIKYVLRLVDLYGPFLFFKGVDWDQD 106
           R +  + + L                      +RK K  +RLV LY P++ FKG+ +D  
Sbjct: 312 RVYTNLRYKLPIQILGLLSVISLSQRDKFALHNRKFKMAMRLVKLYKPYVLFKGI-FDDK 371

[Close]

BLAST of Lsi03G000770 vs. TAIR10
Match: AT4G33790.1 (AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 58.2 bits (139), Expect = 4.1e-09
Identity = 39/134 (29.10%), Postives = 58/134 (43.28%), Query Frame = 1


Query: 13  IYHVSSSMRNPVLYGKLQE------------------------------YGFHYFRANPW 72
           IYHV SS+RNP+   K  E                                FH +    +
Sbjct: 337 IYHVGSSLRNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRY 396

Query: 73  INKDGQPVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGVDWDQDHGP 117
           +      ++GLE+VN  LC+ F+      ++KI ++ RLVDLY P+LFF G+ +D  +  
Sbjct: 397 LIA----LKGLELVNIILCKLFEKEFQYFNKKINFIFRLVDLYQPYLFFYGI-FDDSNTE 456

[Close]

BLAST of Lsi03G000770 vs. TAIR10
Match: AT3G44560.1 (AT3G44560.1 fatty acid reductase 8)

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 35/122 (28.69%), Postives = 57/122 (46.72%), Query Frame = 1


Query: 4   HASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQ--------------- 63
           HA     + +Y V SS +NP++YG+++E  F YF  N   +++G                
Sbjct: 326 HAGGSKVHMVYQVGSSHQNPIIYGEIREILFCYFTKNSLRSRNGSMITVSKMKLIPTLAL 385

Query: 64  -----------PVRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGVDWD 100
                      PV+ L++V+            N +RKI  V+RLV LY P++ FKG+  D
Sbjct: 386 FSLYMTIRYKLPVQLLKLVDIIYPSREGDEYKNKNRKIDMVMRLVKLYEPYVLFKGIFDD 445

[Close]

BLAST of Lsi03G000770 vs. TAIR10
Match: AT5G22500.1 (AT5G22500.1 fatty acid reductase 1)

HSP 1 Score: 54.3 bits (129), Expect = 5.9e-08
Identity = 35/113 (30.97%), Postives = 53/113 (46.90%), Query Frame = 1


Query: 3   AHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPVRGLEVVNTALCR 62
           AH+      AIYHV SS +NPV +G+L ++   YF   P I ++G P+  + V  T L  
Sbjct: 322 AHSGDTGIQAIYHVGSSCKNPVTFGQLHDFTARYFAKRPLIGRNGSPI--IVVKGTILST 381

Query: 63  YFDGMLFNLDRKIKY-----VLRLVDLYGPFLFFKGVDWDQDHGPTIRDWDRK 111
                 F+L   ++Y     +LRL+++  P+           HG    D  RK
Sbjct: 382 MAQ---FSLYMTLRYKLPLQILRLINIVYPW----------SHGDNYSDLSRK 419

[Close]

BLAST of Lsi03G000770 vs. NCBI nr
Match: gi|659071836|ref|XP_008462145.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 4.2e-40
Identity = 85/120 (70.83%), Postives = 90/120 (75.00%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPVR--------- 60
           MVAHASQPSSYAIYHVSSSMRNPV+YGKLQEYGFHYF ANPWINKDGQPVR         
Sbjct: 323 MVAHASQPSSYAIYHVSSSMRNPVMYGKLQEYGFHYFSANPWINKDGQPVRVGKVTILKD 382

Query: 61  -----------------GLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                            GLEV+N ALC YFDG+LFN +RKIKYVLRLVDLYGP+LFFKGV
Sbjct: 383 MASFHRYMTIRYLVFLKGLEVLNIALCHYFDGILFNFNRKIKYVLRLVDLYGPYLFFKGV 442

[Close]

BLAST of Lsi03G000770 vs. NCBI nr
Match: gi|659071834|ref|XP_008462137.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 172.6 bits (436), Expect = 4.2e-40
Identity = 85/120 (70.83%), Postives = 90/120 (75.00%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPVR--------- 60
           MVAHASQPSSYAIYHVSSSMRNPV+YGKLQEYGFHYF ANPWINKDGQPVR         
Sbjct: 323 MVAHASQPSSYAIYHVSSSMRNPVMYGKLQEYGFHYFSANPWINKDGQPVRVGKVTILKD 382

Query: 61  -----------------GLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                            GLEV+N ALC YFDG+LFN +RKIKYVLRLVDLYGP+LFFKGV
Sbjct: 383 MASFHRYMTIRYLVFLKGLEVLNIALCHYFDGILFNFNRKIKYVLRLVDLYGPYLFFKGV 442

[Close]

BLAST of Lsi03G000770 vs. NCBI nr
Match: gi|449443606|ref|XP_004139568.1| (PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus])

HSP 1 Score: 162.5 bits (410), Expect = 4.4e-37
Identity = 80/120 (66.67%), Postives = 87/120 (72.50%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPV---------- 60
           MVAHASQ SSY IYHVSSSMRNP++Y KLQEYGFHYF ANPWINKDGQPV          
Sbjct: 323 MVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILND 382

Query: 61  ----------------RGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                           +GLEV+N ALC YFDG+LFN +RKIKYVLRLVDLYGP+LFFKGV
Sbjct: 383 MASFHRYMTIRYLVFLKGLEVLNIALCHYFDGILFNFNRKIKYVLRLVDLYGPYLFFKGV 442

[Close]

BLAST of Lsi03G000770 vs. NCBI nr
Match: gi|703074584|ref|XP_010089855.1| (Fatty acyl-CoA reductase 3 [Morus notabilis])

HSP 1 Score: 121.7 bits (304), Expect = 8.6e-25
Identity = 61/121 (50.41%), Postives = 77/121 (63.64%), Query Frame = 1


Query: 1   MVAHASQPSSY-AIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQP---------- 60
           + AHA+QPSS   IY V SS+RNPV Y  LQ+YGF YF   PWINKDG+P          
Sbjct: 322 IAAHANQPSSENVIYQVGSSVRNPVRYSNLQDYGFRYFSKKPWINKDGKPIKVRKVLVLG 381

Query: 61  ----------------VRGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKG 95
                           ++GLE+VNTA C+YF GM  +L+RKI++V+RLV+LY P+LFFKG
Sbjct: 382 DMASFRRYMSVRYLLFLKGLELVNTAFCQYFQGMYLDLNRKIQFVMRLVELYRPYLFFKG 441

[Close]

BLAST of Lsi03G000770 vs. NCBI nr
Match: gi|922367351|ref|XP_013455842.1| (gland-specific fatty acyl-CoA reductase [Medicago truncatula])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 59/120 (49.17%), Postives = 78/120 (65.00%), Query Frame = 1


Query: 1   MVAHASQPSSYAIYHVSSSMRNPVLYGKLQEYGFHYFRANPWINKDGQPV---------- 60
           +VAHA+ P++ AIYHV SS+R P++Y  LQE+GF +F+A P+INKDG+PV          
Sbjct: 322 IVAHANHPNNDAIYHVGSSIRRPLMYSDLQEFGFRHFKAKPYINKDGKPVKVGKVTVFSN 381

Query: 61  ----------------RGLEVVNTALCRYFDGMLFNLDRKIKYVLRLVDLYGPFLFFKGV 95
                           +GLE+ NTALC+YF G   +L RKI+ V+RLVDLY P+LFFKGV
Sbjct: 382 MDSFSRFMFIRYLLMLKGLEIANTALCQYFKGTYLDLKRKIQIVMRLVDLYKPYLFFKGV 441

The following BLAST results are available for this feature:

BLAST of Lsi03G000770 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAR_SIMCH	6.8e-14	37.19	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1	[more]
FACR4_ARATH	1.3e-09	28.21	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1	[more]
FACR7_ARATH	5.6e-08	26.98	Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7 PE=3 SV=1	[more]
FACR3_ARATH	7.3e-08	29.10	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1	[more]
FACR8_ARATH	4.7e-07	28.69	Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2 SV=1	[more]

BLAST of Lsi03G000770 vs. TrEMBL


Match Name	E-value	Identity	Description
W9R5G3_9ROSA	6.0e-25	50.41	Fatty acyl-CoA reductase 3 OS=Morus notabilis GN=L484_022372 PE=4 SV=1	[more]
A0A072ULF3_MEDTR	7.8e-25	49.17	Gland-specific fatty acyl-CoA reductase OS=Medicago truncatula GN=MTR_4g053785 P...	[more]
I1LRE5_SOYBN	1.3e-24	51.69	Uncharacterized protein OS=Glycine max GN=GLYMA_12G087400 PE=4 SV=1	[more]
A0A0B2QI01_GLYSO	1.3e-24	51.69	Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_006610 PE=4 SV=1	[more]
V7AJX1_PHAVU	3.9e-24	47.86	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G092500g PE=4 SV=1	[more]

BLAST of Lsi03G000770 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44540.1	7.5e-11	28.21	fatty acid reductase 4	[more]
AT5G22420.1	3.1e-09	26.98	fatty acid reductase 7	[more]
AT4G33790.1	4.1e-09	29.10	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G44560.1	2.7e-08	28.69	fatty acid reductase 8	[more]
AT5G22500.1	5.9e-08	30.97	fatty acid reductase 1	[more]

BLAST of Lsi03G000770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659071836\|ref\|XP_008462145.1\|	4.2e-40	70.83	PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo]	[more]
gi\|659071834\|ref\|XP_008462137.1\|	4.2e-40	70.83	PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo]	[more]
gi\|449443606\|ref\|XP_004139568.1\|	4.4e-37	66.67	PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus]	[more]
gi\|703074584\|ref\|XP_010089855.1\|	8.6e-25	50.41	Fatty acyl-CoA reductase 3 [Morus notabilis]	[more]
gi\|922367351\|ref\|XP_013455842.1\|	1.1e-24	49.17	gland-specific fatty acyl-CoA reductase [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Vocabulary: **INTERPRO**
Term	Definition
IPR026055	FAR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006629	lipid metabolic process
biological_process	GO:0035336	long-chain fatty-acyl-CoA metabolic process
biological_process	GO:0010345	suberin biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G000770.1	Lsi03G000770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 1..94 score: 4.2
None	No IPR available	PANTHER	PTHR11011:SF40	SUBFAMILY NOT NAMED	coord: 1..94 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi03G000770	Csa1G145840	Cucumber (Chinese Long) v2	culsiB044
Lsi03G000770	CSPI01G14210	Wild cucumber (PI 183967)	cpilsiB046
Lsi03G000770	Cucsa.200150	Cucumber (Gy14) v1	cgylsiB343
Lsi03G000770	Cla001678	Watermelon (97103) v1	lsiwmB261
Lsi03G000770	ClCG01G012910	Watermelon (Charleston Gray)	lsiwcgB231
Lsi03G000770	MELO3C004822.2	Melon (DHL92) v3.6.1	lsimedB255
Lsi03G000770	Cla97C01G011960	Watermelon (97103) v2	lsiwmbB217
Lsi03G000770	Bhi08G000093	Wax gourd	lsiwgoB337
Lsi03G000770	CsGy1G014170	Cucumber (Gy14) v2	cgyblsiB041
Lsi03G000770	CsaV3_1G014400	Cucumber (Chinese Long) v3	cuclsiB048

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G000770	Cucurbita moschata (Rifu)	cmolsiB158
Lsi03G000770	Cucurbita moschata (Rifu)	cmolsiB203
Lsi03G000770	Cucurbita pepo (Zucchini)	cpelsiB429
Lsi03G000770	Cucurbita pepo (Zucchini)	cpelsiB670
Lsi03G000770	Melon (DHL92) v3.5.1	lsimeB244
Lsi03G000770	Watermelon (Charleston Gray)	lsiwcgB234
Lsi03G000770	Watermelon (97103) v1	lsiwmB270
Lsi03G000770	Watermelon (97103) v1	lsiwmB263
Lsi03G000770	Silver-seed gourd	carlsiB149
Lsi03G000770	Watermelon (97103) v2	lsiwmbB227
Lsi03G000770	Bottle gourd (USVL1VR-Ls)	lsilsiB042
Lsi03G000770	Cucurbita maxima (Rimu)	cmalsiB168
Lsi03G000770	Cucurbita maxima (Rimu)	cmalsiB212