Csa1G145840 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G145840
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Fatty acyl-CoA reductase; contains IPR013120 (Male sterility, NAD-binding), IPR026055 (Fatty acyl-CoA reductase)
Location	Chr1 : 9672068 .. 9673528 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATGGAGTAGTGTTGCACTCAATATCCACCTAACGAATAATTTATTGTCTGTCGCTCATACTAGATTAAAGTCTGTCTGCCGCAAAGCGTTGCGATGCTAGGGATAGCTTCGCGACGCTGACCACCTAATGCTAGCTACCGCATGCATGGAGGACATCATGTTGCATTCTTATTTGTGAGCGACAATGTAATGCTTGGGGCAACGCTTGCTTTCAAGGATATTTTAGGAATTTAGTATATTTTTCTCATTTTTGCTTCAAATTGATCTAGTTTTAGACAATTTCGATCGTCTCTTTTACCTCCCATTGATAATTCAATCATCACATTAAATTTAATAAAATTAACTAATTTCATCTATAAGTTTGTAAATTACTATTTTAGCAGTAGCGGTAGTGAATCCAACTTAAATCACTAATAAATCTTACGGTCTCTCAACCTCAAACTAATAGATAAGAGAAAATTTGACCTTTACATATATATATTTTTAATAAAGATATTGAATTATTAGAAAGTGAACAAGACGTAACAACCTAACTATAGTCAAAGTACAAATAAAATACCATACAAATAATGAAAAAGTCAAATCAAACCCAAAAATAAAGAATTATATACCTCAAAGAAAAACATTTCATTGAAAAGAGCCATCATTGGTCCTACAATAGAAACTCTCACCCATTAATAACAACATAGTAAAAGTTGAAAGCAAACAACTTGACTAACCACCTAGAGAGAACACCAAGACCAAGGAAAAGTATATTATGTTAACTCCAAACGTTACAAATAGCACATCAAACACTTTGACAGACCTTATGCTTCAACTACTTAATTACTTCTACTAAAGTTACAAAAGTACGCATATTTTTAGCGGTAGTTAATATTAGCAATTATTAATTAACAATATTTTTGCCTTTATGCAACAGAACCATTGATAGCCTTGCTGTTGCATATGGTAAAGGGAAAATAACATGTTTCCTTGGAGATGTCAATGCATTGGTAGATGTTGTAAGTAATAACTCAAAACACTTTCATATCCCTCTTAAACTCTTCTTTTCAATGTTTTTCTTATCATGCTAACAGAGAATACAACACTACTCAAACAATTTGATACTACTTTTTGTGTGTATGTATTATTGCACAATATATAGATTCCAGCTGATATGGTCGTGAATGCAATGCTCGTAGCAATGGTAGCTCATGCGAGCCAACTGTCATCATACACTATTTATCATGTGAGTTCCTCCATGAGAAATCCGATAATGTATAGGAAGCTTCAAGAGTATGGATTTCACTACTTTAGTGCAAACCCATGGATCAACAAAGATGGGCAACCTGTTAAGGTTGGAAAGGTCACAATTCTAAACGACATGGCTAGCTTCCATAGATATATGACCATTCGGTATTTGGTATTTCTCAAGGTTTGCTTTCTATCACCATTATCTTTTAATAAGGATATATAA

mRNA sequence

ATGCCATGGAGTAGTGTTGCACTCAATATCCACCTAACGAATAATTTATTGTCTGTCGCTCATACTAGATTAAAGTCTGTCTGCCGCAAAGCAACCATTGATAGCCTTGCTGTTGCATATGGTAAAGGGAAAATAACATGTTTCCTTGGAGATGTCAATGCATTGGTAGATGTTATTCCAGCTGATATGGTCGTGAATGCAATGCTCGTAGCAATGGTAGCTCATGCGAGCCAACTGTCATCATACACTATTTATCATGTGAGTTCCTCCATGAGAAATCCGATAATGTATAGGAAGCTTCAAGAGTATGGATTTCACTACTTTAGTGCAAACCCATGGATCAACAAAGATGGGCAACCTGTTAAGGTTGGAAAGGTCACAATTCTAAACGACATGGCTAGCTTCCATAGATATATGACCATTCGGTATTTGGTATTTCTCAAGGTTTGCTTTCTATCACCATTATCTTTTAATAAGGATATATAA

Coding sequence (CDS)

ATGCCATGGAGTAGTGTTGCACTCAATATCCACCTAACGAATAATTTATTGTCTGTCGCTCATACTAGATTAAAGTCTGTCTGCCGCAAAGCAACCATTGATAGCCTTGCTGTTGCATATGGTAAAGGGAAAATAACATGTTTCCTTGGAGATGTCAATGCATTGGTAGATGTTATTCCAGCTGATATGGTCGTGAATGCAATGCTCGTAGCAATGGTAGCTCATGCGAGCCAACTGTCATCATACACTATTTATCATGTGAGTTCCTCCATGAGAAATCCGATAATGTATAGGAAGCTTCAAGAGTATGGATTTCACTACTTTAGTGCAAACCCATGGATCAACAAAGATGGGCAACCTGTTAAGGTTGGAAAGGTCACAATTCTAAACGACATGGCTAGCTTCCATAGATATATGACCATTCGGTATTTGGTATTTCTCAAGGTTTGCTTTCTATCACCATTATCTTTTAATAAGGATATATAA

Protein sequence

MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI*

Homology

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BLAST of Csa1G145840 vs. Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.1e-34
Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAV YGKGK+TCFL D++A+ DV+PADMVVN++LV+M A A +     IYHV SS+
Sbjct: 286 TIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSL 345

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+   K  E  + YFS  PW NK+G+ VKVG + IL+ M SFHRYMTIRYL+ LK
Sbjct: 346 RNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK 401

[Close]

BLAST of Csa1G145840 vs. Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-28
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDS+ VAYGKG++ CFL D N+++D+IP DMV NAM+ A   HA +L S T+YHV SS 
Sbjct: 282 TIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSC 341

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NPI + ++ +    YF+ NP + +DG  + V K TIL+ MA F  YMT+RY + L++
Sbjct: 342 KNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQM 399

[Close]

BLAST of Csa1G145840 vs. Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.6e-27
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ VAYGKG++ CFL D N++ D+IPADMVVNAM+ A  AH+       IYHV SS 
Sbjct: 280 TLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSC 339

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + +L ++   YF+  P I ++G P+ V K TIL+ MA F  YMT+RY + L++
Sbjct: 340 KNPVTFGQLHDFTARYFAKRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQI 397

[Close]

BLAST of Csa1G145840 vs. Swiss-Prot
Match: FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTI-YHVSSS 91
           TID++ V YGKG++ C L   + ++D+IPADMVVNA +VAMVAHA+Q     + YHV SS
Sbjct: 283 TIDNVPVYYGKGRLRCMLCGPSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSS 342

Query: 92  MRNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
             NP+    L E    YF+ NPWIN D  PV VG+  + +  ++FH Y+T+ +L+ LKV
Sbjct: 343 AANPMKLSALPEMAHRYFTKNPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKV 401

[Close]

BLAST of Csa1G145840 vs. Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ +AYGKG + CFL DVN++ D+IP DMV NAM+ A   HA     + +YHV SS 
Sbjct: 283 TVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSH 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + ++ E    YF+ NP  +++G  + V KV  +  MA F  YMT+RY + L++
Sbjct: 343 QNPVTFGEIHEIAVRYFTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQL 400

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BLAST of Csa1G145840 vs. TrEMBL
Match: A0A0A0LVM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145840 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 2.9e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60
           MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP
Sbjct: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60

Query: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120
           ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP
Sbjct: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120

Query: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 162
           VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI
Sbjct: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 161

[Close]

BLAST of Csa1G145840 vs. TrEMBL
Match: A0A151TNW3_CAJCA (Fatty acyl-CoA reductase 3 OS=Cajanus cajan GN=KK1_022396 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-41
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VDVIPADMVVNA+LVA VAHA   S   IYHV SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDVIPADMVVNAILVATVAHAKHPSDDVIYHVGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           R P+ Y  LQ+YG  YF+A PWINKDG+PVKVGKVT+L+DM SF RYM IRYL+ LK
Sbjct: 344 RRPVRYSNLQDYGLRYFTAKPWINKDGRPVKVGKVTVLSDMDSFRRYMFIRYLLMLK 400

[Close]

BLAST of Csa1G145840 vs. TrEMBL
Match: I1LKT6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G185000 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-41
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VD IPADMVVNA+LVAMVAHA++ S   IYH+ SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCF 151
           R P+ Y KLQEYGF YF+A P I+KDG+PVKVGKVT+L++M SF RYM IRYL+ LK   
Sbjct: 344 RRPLRYGKLQEYGFRYFTAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLE 403

Query: 152 LSPLSF 158
           L+  +F
Sbjct: 404 LANTAF 409

[Close]

BLAST of Csa1G145840 vs. TrEMBL
Match: A0A0L9V682_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g139200 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-41
Identity = 84/126 (66.67%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A++D IPADMVVNA+LVAMVAHA++ S   IY++ SS+
Sbjct: 40  TIDSLAVAYGKGKLTCFLGDLKAIIDAIPADMVVNAILVAMVAHANRPSDDVIYNIGSSV 99

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCF 151
           R P+ Y  LQ+YG  YF+A PWINKDG+PVKVGKVT+L++M SF RYM IRYLV LK   
Sbjct: 100 RKPLRYSNLQDYGLRYFTAKPWINKDGRPVKVGKVTVLDNMDSFRRYMFIRYLVVLKGLE 159

Query: 152 LSPLSF 158
           L+  +F
Sbjct: 160 LANTAF 165

[Close]

BLAST of Csa1G145840 vs. TrEMBL
Match: A0A0B2S090_GLYSO (Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_008194 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-41
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VD IPADMVVNA+LVAMVAHA++ S   IYH+ SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCF 151
           R P+ Y KLQEYGF YF+A P I+KDG+PVKVGKVT+L++M SF RYM IRYL+ LK   
Sbjct: 344 RRPLRYGKLQEYGFRYFTAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLE 403

Query: 152 LSPLSF 158
           L+  +F
Sbjct: 404 LANTAF 409

[Close]

BLAST of Csa1G145840 vs. TAIR10
Match: AT4G33790.1 (AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 144.8 bits (364), Expect = 4.6e-35
Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAV YGKGK+TCFL D++A+ DV+PADMVVN++LV+M A A +     IYHV SS+
Sbjct: 286 TIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSL 345

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+   K  E  + YFS  PW NK+G+ VKVG + IL+ M SFHRYMTIRYL+ LK
Sbjct: 346 RNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK 401

[Close]

BLAST of Csa1G145840 vs. TAIR10
Match: AT3G44540.1 (AT3G44540.1 fatty acid reductase 4)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-29
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDS+ VAYGKG++ CFL D N+++D+IP DMV NAM+ A   HA +L S T+YHV SS 
Sbjct: 282 TIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSC 341

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NPI + ++ +    YF+ NP + +DG  + V K TIL+ MA F  YMT+RY + L++
Sbjct: 342 KNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQM 399

[Close]

BLAST of Csa1G145840 vs. TAIR10
Match: AT5G22500.1 (AT5G22500.1 fatty acid reductase 1)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ VAYGKG++ CFL D N++ D+IPADMVVNAM+ A  AH+       IYHV SS 
Sbjct: 280 TLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSC 339

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + +L ++   YF+  P I ++G P+ V K TIL+ MA F  YMT+RY + L++
Sbjct: 340 KNPVTFGQLHDFTARYFAKRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQI 397

[Close]

BLAST of Csa1G145840 vs. TAIR10
Match: AT3G44550.1 (AT3G44550.1 fatty acid reductase 5)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ +AYGKG + CFL DVN++ D+IP DMV NAM+ A   HA     + +YHV SS 
Sbjct: 283 TVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSH 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + ++ E    YF+ NP  +++G  + V KV  +  MA F  YMT+RY + L++
Sbjct: 343 QNPVTFGEIHEIAVRYFTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQL 400

[Close]

BLAST of Csa1G145840 vs. TAIR10
Match: AT3G44560.1 (AT3G44560.1 fatty acid reductase 8)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-24
Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ +AYGKG + CFL DVN++ D+IPADMV NAM+ A   HA     + +Y V SS 
Sbjct: 283 TVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSH 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRY 144
           +NPI+Y +++E  F YF+ N   +++G  + V K+ ++  +A F  YMTIRY
Sbjct: 343 QNPIIYGEIREILFCYFTKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRY 394

[Close]

BLAST of Csa1G145840 vs. NCBI nr
Match: gi|700209786|gb|KGN64882.1| (hypothetical protein Csa_1G145840 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 4.1e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60
           MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP
Sbjct: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60

Query: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120
           ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP
Sbjct: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120

Query: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 162
           VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI
Sbjct: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 161

[Close]

BLAST of Csa1G145840 vs. NCBI nr
Match: gi|449443606|ref|XP_004139568.1| (PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 1.5e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM
Sbjct: 283 TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK
Sbjct: 343 RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 399

[Close]

BLAST of Csa1G145840 vs. NCBI nr
Match: gi|659071834|ref|XP_008462137.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQ SSY IYHVSSSM
Sbjct: 283 TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQPSSYAIYHVSSSM 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+MY KLQEYGFHYFSANPWINKDGQPV+VGKVTIL DMASFHRYMTIRYLVFLK
Sbjct: 343 RNPVMYGKLQEYGFHYFSANPWINKDGQPVRVGKVTILKDMASFHRYMTIRYLVFLK 399

[Close]

BLAST of Csa1G145840 vs. NCBI nr
Match: gi|659071836|ref|XP_008462145.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQ SSY IYHVSSSM
Sbjct: 283 TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQPSSYAIYHVSSSM 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+MY KLQEYGFHYFSANPWINKDGQPV+VGKVTIL DMASFHRYMTIRYLVFLK
Sbjct: 343 RNPVMYGKLQEYGFHYFSANPWINKDGQPVRVGKVTILKDMASFHRYMTIRYLVFLK 399

[Close]

BLAST of Csa1G145840 vs. NCBI nr
Match: gi|1012357570|gb|KYP68755.1| (Fatty acyl-CoA reductase 3 [Cajanus cajan])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VDVIPADMVVNA+LVA VAHA   S   IYHV SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDVIPADMVVNAILVATVAHAKHPSDDVIYHVGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           R P+ Y  LQ+YG  YF+A PWINKDG+PVKVGKVT+L+DM SF RYM IRYL+ LK
Sbjct: 344 RRPVRYSNLQDYGLRYFTAKPWINKDGRPVKVGKVTVLSDMDSFRRYMFIRYLLMLK 400

The following BLAST results are available for this feature:

BLAST of Csa1G145840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FACR3_ARATH	8.1e-34	60.68	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1	[more]
FACR4_ARATH	3.0e-28	49.15	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1	[more]
FACR1_ARATH	5.6e-27	48.31	Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1	[more]
FAR_SIMCH	1.1e-25	47.90	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1	[more]
FACR5_ARATH	2.2e-23	43.22	Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1	[more]

BLAST of Csa1G145840 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVM4_CUCSA	2.9e-86	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145840 PE=4 SV=1	[more]
A0A151TNW3_CAJCA	1.3e-41	72.65	Fatty acyl-CoA reductase 3 OS=Cajanus cajan GN=KK1_022396 PE=4 SV=1	[more]
I1LKT6_SOYBN	8.1e-41	68.25	Uncharacterized protein OS=Glycine max GN=GLYMA_11G185000 PE=4 SV=1	[more]
A0A0L9V682_PHAAN	8.1e-41	66.67	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g139200 PE=4 SV=1	[more]
A0A0B2S090_GLYSO	8.1e-41	68.25	Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_008194 PE=4 SV=1	[more]

BLAST of Csa1G145840 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33790.1	4.6e-35	60.68	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G44540.1	1.7e-29	49.15	fatty acid reductase 4	[more]
AT5G22500.1	3.2e-28	48.31	fatty acid reductase 1	[more]
AT3G44550.1	1.2e-24	43.22	fatty acid reductase 5	[more]
AT3G44560.1	4.7e-24	45.54	fatty acid reductase 8	[more]

BLAST of Csa1G145840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209786\|gb\|KGN64882.1\|	4.1e-86	100.00	hypothetical protein Csa_1G145840 [Cucumis sativus]	[more]
gi\|449443606\|ref\|XP_004139568.1\|	1.5e-59	100.00	PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus]	[more]
gi\|659071834\|ref\|XP_008462137.1\|	3.4e-56	94.87	PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo]	[more]
gi\|659071836\|ref\|XP_008462145.1\|	3.4e-56	94.87	PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo]	[more]
gi\|1012357570\|gb\|KYP68755.1\|	1.8e-41	72.65	Fatty acyl-CoA reductase 3 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013120	Male_sterile_NAD-bd
IPR026055	FAR

Vocabulary: **Molecular Function**
Term	Definition
GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G145840.1	Csa1G145840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013120	Male sterility, NAD-binding	PFAM	PF07993	NAD_binding_4	coord: 31..68 score: 8.
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 32..148 score: 8.4
None	No IPR available	PANTHER	PTHR11011:SF25	FATTY ACYL-COA REDUCTASE 3-RELATED	coord: 32..148 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G145840	Cla001678	Watermelon (97103) v1	cuwmB045
Csa1G145840	ClCG01G012910	Watermelon (Charleston Gray)	cuwcgB024
Csa1G145840	Lsi03G000770	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G145840	MELO3C004822.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G145840	CSPI01G14210	Wild cucumber (PI 183967)	cpicuB000
Csa1G145840	Cucsa.200150	Cucumber (Gy14) v1	cgycuB305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G145840	Melon (DHL92) v3.5.1	cumeB015
Csa1G145840	Watermelon (Charleston Gray)	cuwcgB028
Csa1G145840	Watermelon (97103) v1	cuwmB065
Csa1G145840	Cucurbita pepo (Zucchini)	cpecuB516
Csa1G145840	Cucurbita pepo (Zucchini)	cpecuB808
Csa1G145840	Bottle gourd (USVL1VR-Ls)	culsiB005
Csa1G145840	Cucumber (Gy14) v2	cgybcuB001
Csa1G145840	Silver-seed gourd	carcuB0185
Csa1G145840	Watermelon (97103) v2	cuwmbB009
Csa1G145840	Watermelon (97103) v2	cuwmbB026
Csa1G145840	Wax gourd	cuwgoB049
Csa1G145840	Cucurbita maxima (Rimu)	cmacuB163
Csa1G145840	Cucurbita maxima (Rimu)	cmacuB203
Csa1G145840	Cucurbita maxima (Rimu)	cmacuB579
Csa1G145840	Cucurbita moschata (Rifu)	cmocuB148
Csa1G145840	Cucurbita moschata (Rifu)	cmocuB188