Csa1G145840.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G145840.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Fatty acyl-CoA reductase; contains IPR013120 (Male sterility, NAD-binding), IPR026055 (Fatty acyl-CoA reductase)
Location	Chr1 : 9672068 .. 9673528 (-)
Sequence length	486

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATGGAGTAGTGTTGCACTCAATATCCACCTAACGAATAATTTATTGTCTGTCGCTCATACTAGATTAAAGTCTGTCTGCCGCAAAGCGTTGCGATGCTAGGGATAGCTTCGCGACGCTGACCACCTAATGCTAGCTACCGCATGCATGGAGGACATCATGTTGCATTCTTATTTGTGAGCGACAATGTAATGCTTGGGGCAACGCTTGCTTTCAAGGATATTTTAGGAATTTAGTATATTTTTCTCATTTTTGCTTCAAATTGATCTAGTTTTAGACAATTTCGATCGTCTCTTTTACCTCCCATTGATAATTCAATCATCACATTAAATTTAATAAAATTAACTAATTTCATCTATAAGTTTGTAAATTACTATTTTAGCAGTAGCGGTAGTGAATCCAACTTAAATCACTAATAAATCTTACGGTCTCTCAACCTCAAACTAATAGATAAGAGAAAATTTGACCTTTACATATATATATTTTTAATAAAGATATTGAATTATTAGAAAGTGAACAAGACGTAACAACCTAACTATAGTCAAAGTACAAATAAAATACCATACAAATAATGAAAAAGTCAAATCAAACCCAAAAATAAAGAATTATATACCTCAAAGAAAAACATTTCATTGAAAAGAGCCATCATTGGTCCTACAATAGAAACTCTCACCCATTAATAACAACATAGTAAAAGTTGAAAGCAAACAACTTGACTAACCACCTAGAGAGAACACCAAGACCAAGGAAAAGTATATTATGTTAACTCCAAACGTTACAAATAGCACATCAAACACTTTGACAGACCTTATGCTTCAACTACTTAATTACTTCTACTAAAGTTACAAAAGTACGCATATTTTTAGCGGTAGTTAATATTAGCAATTATTAATTAACAATATTTTTGCCTTTATGCAACAGAACCATTGATAGCCTTGCTGTTGCATATGGTAAAGGGAAAATAACATGTTTCCTTGGAGATGTCAATGCATTGGTAGATGTTGTAAGTAATAACTCAAAACACTTTCATATCCCTCTTAAACTCTTCTTTTCAATGTTTTTCTTATCATGCTAACAGAGAATACAACACTACTCAAACAATTTGATACTACTTTTTGTGTGTATGTATTATTGCACAATATATAGATTCCAGCTGATATGGTCGTGAATGCAATGCTCGTAGCAATGGTAGCTCATGCGAGCCAACTGTCATCATACACTATTTATCATGTGAGTTCCTCCATGAGAAATCCGATAATGTATAGGAAGCTTCAAGAGTATGGATTTCACTACTTTAGTGCAAACCCATGGATCAACAAAGATGGGCAACCTGTTAAGGTTGGAAAGGTCACAATTCTAAACGACATGGCTAGCTTCCATAGATATATGACCATTCGGTATTTGGTATTTCTCAAGGTTTGCTTTCTATCACCATTATCTTTTAATAAGGATATATAA

mRNA sequence

ATGCCATGGAGTAGTGTTGCACTCAATATCCACCTAACGAATAATTTATTGTCTGTCGCTCATACTAGATTAAAGTCTGTCTGCCGCAAAGCAACCATTGATAGCCTTGCTGTTGCATATGGTAAAGGGAAAATAACATGTTTCCTTGGAGATGTCAATGCATTGGTAGATGTTATTCCAGCTGATATGGTCGTGAATGCAATGCTCGTAGCAATGGTAGCTCATGCGAGCCAACTGTCATCATACACTATTTATCATGTGAGTTCCTCCATGAGAAATCCGATAATGTATAGGAAGCTTCAAGAGTATGGATTTCACTACTTTAGTGCAAACCCATGGATCAACAAAGATGGGCAACCTGTTAAGGTTGGAAAGGTCACAATTCTAAACGACATGGCTAGCTTCCATAGATATATGACCATTCGGTATTTGGTATTTCTCAAGGTTTGCTTTCTATCACCATTATCTTTTAATAAGGATATATAA

Coding sequence (CDS)

ATGCCATGGAGTAGTGTTGCACTCAATATCCACCTAACGAATAATTTATTGTCTGTCGCTCATACTAGATTAAAGTCTGTCTGCCGCAAAGCAACCATTGATAGCCTTGCTGTTGCATATGGTAAAGGGAAAATAACATGTTTCCTTGGAGATGTCAATGCATTGGTAGATGTTATTCCAGCTGATATGGTCGTGAATGCAATGCTCGTAGCAATGGTAGCTCATGCGAGCCAACTGTCATCATACACTATTTATCATGTGAGTTCCTCCATGAGAAATCCGATAATGTATAGGAAGCTTCAAGAGTATGGATTTCACTACTTTAGTGCAAACCCATGGATCAACAAAGATGGGCAACCTGTTAAGGTTGGAAAGGTCACAATTCTAAACGACATGGCTAGCTTCCATAGATATATGACCATTCGGTATTTGGTATTTCTCAAGGTTTGCTTTCTATCACCATTATCTTTTAATAAGGATATATAA

Protein sequence

MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI*

Homology

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BLAST of Csa1G145840.1 vs. Swiss-Prot
Match: FACR3_ARATH (Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.1e-34
Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAV YGKGK+TCFL D++A+ DV+PADMVVN++LV+M A A +     IYHV SS+
Sbjct: 286 TIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSL 345

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+   K  E  + YFS  PW NK+G+ VKVG + IL+ M SFHRYMTIRYL+ LK
Sbjct: 346 RNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK 401

[Close]

BLAST of Csa1G145840.1 vs. Swiss-Prot
Match: FACR4_ARATH (Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-28
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDS+ VAYGKG++ CFL D N+++D+IP DMV NAM+ A   HA +L S T+YHV SS 
Sbjct: 282 TIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSC 341

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NPI + ++ +    YF+ NP + +DG  + V K TIL+ MA F  YMT+RY + L++
Sbjct: 342 KNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQM 399

[Close]

BLAST of Csa1G145840.1 vs. Swiss-Prot
Match: FACR1_ARATH (Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.6e-27
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ VAYGKG++ CFL D N++ D+IPADMVVNAM+ A  AH+       IYHV SS 
Sbjct: 280 TLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSC 339

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + +L ++   YF+  P I ++G P+ V K TIL+ MA F  YMT+RY + L++
Sbjct: 340 KNPVTFGQLHDFTARYFAKRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQI 397

[Close]

BLAST of Csa1G145840.1 vs. Swiss-Prot
Match: FAR_SIMCH (Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-25
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTI-YHVSSS 91
           TID++ V YGKG++ C L   + ++D+IPADMVVNA +VAMVAHA+Q     + YHV SS
Sbjct: 283 TIDNVPVYYGKGRLRCMLCGPSTIIDLIPADMVVNATIVAMVAHANQRYVEPVTYHVGSS 342

Query: 92  MRNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
             NP+    L E    YF+ NPWIN D  PV VG+  + +  ++FH Y+T+ +L+ LKV
Sbjct: 343 AANPMKLSALPEMAHRYFTKNPWINPDRNPVHVGRAMVFSSFSTFHLYLTLNFLLPLKV 401

[Close]

BLAST of Csa1G145840.1 vs. Swiss-Prot
Match: FACR5_ARATH (Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ +AYGKG + CFL DVN++ D+IP DMV NAM+ A   HA     + +YHV SS 
Sbjct: 283 TVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSH 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + ++ E    YF+ NP  +++G  + V KV  +  MA F  YMT+RY + L++
Sbjct: 343 QNPVTFGEIHEIAVRYFTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQL 400

[Close]

BLAST of Csa1G145840.1 vs. TrEMBL
Match: A0A0A0LVM4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145840 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 2.9e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60
           MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP
Sbjct: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60

Query: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120
           ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP
Sbjct: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120

Query: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 162
           VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI
Sbjct: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 161

[Close]

BLAST of Csa1G145840.1 vs. TrEMBL
Match: A0A151TNW3_CAJCA (Fatty acyl-CoA reductase 3 OS=Cajanus cajan GN=KK1_022396 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-41
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VDVIPADMVVNA+LVA VAHA   S   IYHV SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDVIPADMVVNAILVATVAHAKHPSDDVIYHVGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           R P+ Y  LQ+YG  YF+A PWINKDG+PVKVGKVT+L+DM SF RYM IRYL+ LK
Sbjct: 344 RRPVRYSNLQDYGLRYFTAKPWINKDGRPVKVGKVTVLSDMDSFRRYMFIRYLLMLK 400

[Close]

BLAST of Csa1G145840.1 vs. TrEMBL
Match: I1LKT6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G185000 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-41
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VD IPADMVVNA+LVAMVAHA++ S   IYH+ SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCF 151
           R P+ Y KLQEYGF YF+A P I+KDG+PVKVGKVT+L++M SF RYM IRYL+ LK   
Sbjct: 344 RRPLRYGKLQEYGFRYFTAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLE 403

Query: 152 LSPLSF 158
           L+  +F
Sbjct: 404 LANTAF 409

[Close]

BLAST of Csa1G145840.1 vs. TrEMBL
Match: A0A0L9V682_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g139200 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-41
Identity = 84/126 (66.67%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A++D IPADMVVNA+LVAMVAHA++ S   IY++ SS+
Sbjct: 40  TIDSLAVAYGKGKLTCFLGDLKAIIDAIPADMVVNAILVAMVAHANRPSDDVIYNIGSSV 99

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCF 151
           R P+ Y  LQ+YG  YF+A PWINKDG+PVKVGKVT+L++M SF RYM IRYLV LK   
Sbjct: 100 RKPLRYSNLQDYGLRYFTAKPWINKDGRPVKVGKVTVLDNMDSFRRYMFIRYLVVLKGLE 159

Query: 152 LSPLSF 158
           L+  +F
Sbjct: 160 LANTAF 165

[Close]

BLAST of Csa1G145840.1 vs. TrEMBL
Match: A0A0B2S090_GLYSO (Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_008194 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 8.1e-41
Identity = 86/126 (68.25%), Postives = 104/126 (82.54%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VD IPADMVVNA+LVAMVAHA++ S   IYH+ SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDAIPADMVVNAILVAMVAHANRPSDDVIYHIGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKVCF 151
           R P+ Y KLQEYGF YF+A P I+KDG+PVKVGKVT+L++M SF RYM IRYL+ LK   
Sbjct: 344 RRPLRYGKLQEYGFRYFTAKPCISKDGRPVKVGKVTVLSNMDSFRRYMFIRYLLVLKGLE 403

Query: 152 LSPLSF 158
           L+  +F
Sbjct: 404 LANTAF 409

[Close]

BLAST of Csa1G145840.1 vs. TAIR10
Match: AT4G33790.1 (AT4G33790.1 Jojoba acyl CoA reductase-related male sterility protein)

HSP 1 Score: 144.8 bits (364), Expect = 4.6e-35
Identity = 71/117 (60.68%), Postives = 86/117 (73.50%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAV YGKGK+TCFL D++A+ DV+PADMVVN++LV+M A A +     IYHV SS+
Sbjct: 286 TIDSLAVGYGKGKLTCFLCDLDAVSDVMPADMVVNSILVSMAAQAGKQEEI-IYHVGSSL 345

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+   K  E  + YFS  PW NK+G+ VKVG + IL+ M SFHRYMTIRYL+ LK
Sbjct: 346 RNPMKNSKFPELAYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALK 401

[Close]

BLAST of Csa1G145840.1 vs. TAIR10
Match: AT3G44540.1 (AT3G44540.1 fatty acid reductase 4)

HSP 1 Score: 126.3 bits (316), Expect = 1.7e-29
Identity = 58/118 (49.15%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDS+ VAYGKG++ CFL D N+++D+IP DMV NAM+ A   HA +L S T+YHV SS 
Sbjct: 282 TIDSVIVAYGKGRLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSC 341

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NPI + ++ +    YF+ NP + +DG  + V K TIL+ MA F  YMT+RY + L++
Sbjct: 342 KNPITFEQIHDLAASYFTKNPLVRRDGSSILVSKGTILSTMAQFSFYMTLRYKLPLQM 399

[Close]

BLAST of Csa1G145840.1 vs. TAIR10
Match: AT5G22500.1 (AT5G22500.1 fatty acid reductase 1)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28
Identity = 57/118 (48.31%), Postives = 79/118 (66.95%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ VAYGKG++ CFL D N++ D+IPADMVVNAM+ A  AH+       IYHV SS 
Sbjct: 280 TLDSVIVAYGKGRLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSC 339

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + +L ++   YF+  P I ++G P+ V K TIL+ MA F  YMT+RY + L++
Sbjct: 340 KNPVTFGQLHDFTARYFAKRPLIGRNGSPIIVVKGTILSTMAQFSLYMTLRYKLPLQI 397

[Close]

BLAST of Csa1G145840.1 vs. TAIR10
Match: AT3G44550.1 (AT3G44550.1 fatty acid reductase 5)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24
Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ +AYGKG + CFL DVN++ D+IP DMV NAM+ A   HA     + +YHV SS 
Sbjct: 283 TVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVYHVGSSH 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLKV 150
           +NP+ + ++ E    YF+ NP  +++G  + V KV  +  MA F  YMT+RY + L++
Sbjct: 343 QNPVTFGEIHEIAVRYFTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKLPLQL 400

[Close]

BLAST of Csa1G145840.1 vs. TAIR10
Match: AT3G44560.1 (AT3G44560.1 fatty acid reductase 8)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-24
Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           T+DS+ +AYGKG + CFL DVN++ D+IPADMV NAM+ A   HA     + +Y V SS 
Sbjct: 283 TVDSVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAAAATHAGGSKVHMVYQVGSSH 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRY 144
           +NPI+Y +++E  F YF+ N   +++G  + V K+ ++  +A F  YMTIRY
Sbjct: 343 QNPIIYGEIREILFCYFTKNSLRSRNGSMITVSKMKLIPTLALFSLYMTIRY 394

[Close]

BLAST of Csa1G145840.1 vs. NCBI nr
Match: gi|700209786|gb|KGN64882.1| (hypothetical protein Csa_1G145840 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 4.1e-86
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1


Query: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60
           MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP
Sbjct: 1   MPWSSVALNIHLTNNLLSVAHTRLKSVCRKATIDSLAVAYGKGKITCFLGDVNALVDVIP 60

Query: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120
           ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP
Sbjct: 61  ADMVVNAMLVAMVAHASQLSSYTIYHVSSSMRNPIMYRKLQEYGFHYFSANPWINKDGQP 120

Query: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 162
           VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI
Sbjct: 121 VKVGKVTILNDMASFHRYMTIRYLVFLKVCFLSPLSFNKDI 161

[Close]

BLAST of Csa1G145840.1 vs. NCBI nr
Match: gi|449443606|ref|XP_004139568.1| (PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 1.5e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM
Sbjct: 283 TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK
Sbjct: 343 RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 399

[Close]

BLAST of Csa1G145840.1 vs. NCBI nr
Match: gi|659071834|ref|XP_008462137.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQ SSY IYHVSSSM
Sbjct: 283 TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQPSSYAIYHVSSSM 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+MY KLQEYGFHYFSANPWINKDGQPV+VGKVTIL DMASFHRYMTIRYLVFLK
Sbjct: 343 RNPVMYGKLQEYGFHYFSANPWINKDGQPVRVGKVTILKDMASFHRYMTIRYLVFLK 399

[Close]

BLAST of Csa1G145840.1 vs. NCBI nr
Match: gi|659071836|ref|XP_008462145.1| (PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 3.4e-56
Identity = 111/117 (94.87%), Postives = 113/117 (96.58%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQ SSY IYHVSSSM
Sbjct: 283 TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQPSSYAIYHVSSSM 342

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           RNP+MY KLQEYGFHYFSANPWINKDGQPV+VGKVTIL DMASFHRYMTIRYLVFLK
Sbjct: 343 RNPVMYGKLQEYGFHYFSANPWINKDGQPVRVGKVTILKDMASFHRYMTIRYLVFLK 399

[Close]

BLAST of Csa1G145840.1 vs. NCBI nr
Match: gi|1012357570|gb|KYP68755.1| (Fatty acyl-CoA reductase 3 [Cajanus cajan])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 85/117 (72.65%), Postives = 97/117 (82.91%), Query Frame = 1


Query: 32  TIDSLAVAYGKGKITCFLGDVNALVDVIPADMVVNAMLVAMVAHASQLSSYTIYHVSSSM 91
           TIDSLAVAYGKGK+TCFLGD+ A+VDVIPADMVVNA+LVA VAHA   S   IYHV SS+
Sbjct: 284 TIDSLAVAYGKGKLTCFLGDLKAIVDVIPADMVVNAILVATVAHAKHPSDDVIYHVGSSV 343

Query: 92  RNPIMYRKLQEYGFHYFSANPWINKDGQPVKVGKVTILNDMASFHRYMTIRYLVFLK 149
           R P+ Y  LQ+YG  YF+A PWINKDG+PVKVGKVT+L+DM SF RYM IRYL+ LK
Sbjct: 344 RRPVRYSNLQDYGLRYFTAKPWINKDGRPVKVGKVTVLSDMDSFRRYMFIRYLLMLK 400

The following BLAST results are available for this feature:

BLAST of Csa1G145840.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FACR3_ARATH	8.1e-34	60.68	Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2 SV=1	[more]
FACR4_ARATH	3.0e-28	49.15	Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4 PE=2 SV=1	[more]
FACR1_ARATH	5.6e-27	48.31	Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2 SV=1	[more]
FAR_SIMCH	1.1e-25	47.90	Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis PE=1 SV=1	[more]
FACR5_ARATH	2.2e-23	43.22	Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5 PE=2 SV=1	[more]

BLAST of Csa1G145840.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVM4_CUCSA	2.9e-86	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G145840 PE=4 SV=1	[more]
A0A151TNW3_CAJCA	1.3e-41	72.65	Fatty acyl-CoA reductase 3 OS=Cajanus cajan GN=KK1_022396 PE=4 SV=1	[more]
I1LKT6_SOYBN	8.1e-41	68.25	Uncharacterized protein OS=Glycine max GN=GLYMA_11G185000 PE=4 SV=1	[more]
A0A0L9V682_PHAAN	8.1e-41	66.67	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g139200 PE=4 SV=1	[more]
A0A0B2S090_GLYSO	8.1e-41	68.25	Fatty acyl-CoA reductase 3 OS=Glycine soja GN=glysoja_008194 PE=4 SV=1	[more]

BLAST of Csa1G145840.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33790.1	4.6e-35	60.68	Jojoba acyl CoA reductase-related male sterility protein	[more]
AT3G44540.1	1.7e-29	49.15	fatty acid reductase 4	[more]
AT5G22500.1	3.2e-28	48.31	fatty acid reductase 1	[more]
AT3G44550.1	1.2e-24	43.22	fatty acid reductase 5	[more]
AT3G44560.1	4.7e-24	45.54	fatty acid reductase 8	[more]

BLAST of Csa1G145840.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209786\|gb\|KGN64882.1\|	4.1e-86	100.00	hypothetical protein Csa_1G145840 [Cucumis sativus]	[more]
gi\|449443606\|ref\|XP_004139568.1\|	1.5e-59	100.00	PREDICTED: LOW QUALITY PROTEIN: fatty acyl-CoA reductase 3 [Cucumis sativus]	[more]
gi\|659071834\|ref\|XP_008462137.1\|	3.4e-56	94.87	PREDICTED: fatty acyl-CoA reductase 3-like isoform X1 [Cucumis melo]	[more]
gi\|659071836\|ref\|XP_008462145.1\|	3.4e-56	94.87	PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Cucumis melo]	[more]
gi\|1012357570\|gb\|KYP68755.1\|	1.8e-41	72.65	Fatty acyl-CoA reductase 3 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR013120	Male_sterile_NAD-bd
IPR026055	FAR

Vocabulary: **Molecular Function**
Term	Definition
GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G145840	Csa1G145840	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa1G145840.1	Csa1G145840.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa1G145840.1.cds3	Csa1G145840.1.cds3	CDS
Csa1G145840.1.cds2	Csa1G145840.1.cds2	CDS
Csa1G145840.1.cds1	Csa1G145840.1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013120	Male sterility, NAD-binding	PFAM	PF07993	NAD_binding_4	coord: 31..68 score: 8.
IPR026055	Fatty acyl-CoA reductase	PANTHER	PTHR11011	MALE STERILITY PROTEIN 2-RELATED	coord: 32..148 score: 8.4
None	No IPR available	PANTHER	PTHR11011:SF25	FATTY ACYL-COA REDUCTASE 3-RELATED	coord: 32..148 score: 8.4