Lsi02G021500 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G021500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Rhodanese-like
Location	chr02 : 27868165 .. 27872604 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATCCCAATTCCCAACCAATCTCCTTTCTTCCACAGTCATTTACAGAGCTCTCTCTAATGGAGTCCCACTCCCTATACCTCTCTTCCTCCCCATTTCTCCACAGTCATCGCACAATCCACAAACTCCCTTCTCAGAAACCAATCTCTCAATCCCCTTCTCTCATTCCCTTCACCAATTCAAAACCTCTCACCGTCTTCAATGGCGCCCATTTTTCCTCCATTAACAAAACCCCATTTCCAAGCCCCACCACTCCTTCAAACCCCCATTTCCTCTTTGCAAAAACCTCCCCATTTCACCAATTAGAGAAATCCCATCTCCCTTTTGCTCTAACTCAGCTCTTCCTTCTCACCCCTCTCCCTAGCTTCGCCTTGGAAACCGACCAAGCTTCTTCTGATAAGATAAACTTGGAGTCCATTTTGGTTTCAATCGATGACTTCTTCAATAGATACCCCTTTTTTGTTGCTGGGTGTACTTTCATTTGGCTTGTTGTGATACCCTTGATTGATTACTTTTTTCTAAGAAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAAGATCCGAGATGAACCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTGGGGTCTCCTAATTTGAGGATCTTGAATAAGGATGTGTTGCAGGTTGTGTATTCAGAAGAGGATGAAGATGGGTTTTTGAAGAAGGTGAAGAACAGCTTTGGAGAGGGTGCTGATACTCTAGTCTTTGTCCTGGACAAGTAAGTTGTTTCCATATGCTTCAATTGAAAATGGGTTTGTGTGAGCTGTGGAATTTGGAGAGGTTTCTGTGATCTTCAGGCTGTCGTGTTTTTCTCTGTTTAGCTTCTGGGAATTGTGGCTTAATCATTTTAATCCCAATCTGATAACAATTTGCGTTGGGCTTTTAGTTTTTTAAAATTGTGCTTGTTTACTTCTTTTTTTTTAACATTTGAATTTCAAATTTCAAAAACTATTTTTTTCTTTTTTTAACTGCGTTTTCTAAAAAGTTATAACTAAACAAAGAAATTAATTAGTAGTAGTAGTGTTTATAACCTTAATTTTTTTTAAAAAAAATAGTTATCAAATGGGGCTTTGATTTTGTGTTTTTTGGTTTTTGAGAATTAAGTTTATAAAAACTATTCCACGTATGAGTTCTCTGAAATTCAATCTAAGTTTTGAAAACTAAAAAAAATAGTTTTCTAAAAATTTGTATTTGTTTTTGTGATTTGTCTATGACTTCAAATCTTTCCCTATGAAAGATGAAAAGGACTACAAAGAAATTGTGAAAAAATAAGCAATCAAAAACCAAATTATATCAAATGGGGTCTAATCTTTTCAAGTTTTAGTATAATGTAAGCTTTTCAACCTCTTCTGATGTAACAAGCATTCCAGACGGTTATGCACTCTGTTTTACTTTTTTGCAACAAGAAAGAAATTTGGATTTTGATTTTTTGTATTATGATATACAGCACAGTTTAAATAGAGTGAGTTTAGGATGGGTTTTGAGAGCAAAATCTGGGTGGGATGGGTTTTAAGGATGGTGCTTTTGAGTGAAGTAGTTTTGCGTAAGCATATTTGGAGGAAGAATGTATTTCTCTAAAAGAATTTTCAAGTGCCTTTGAACTGTTTTTTCAGAATTTTCAACTCAACATCCGAAATTTTTTGAAAAGAGACTCTTATAACCATCAATTCATAAGAAGCAACCTACGAAATTAGCAAAGAAAGTTGCTAAAGAAACTTGGAAACTTTGGCATTCTGCTAAGCTTTCCTTCATTGAAGCTGATTGATTTCGTTTGCTAAAGAAACTTGAATTTATATATATTTGAGTTACCAAGCCCATTGTTCATATTACTTGCGATCATGTATTATCATGCCCTGAGTCATGTCTTATGATTTTCATATTTAGCTAATATTGCCTTAAACTTAACAGAAGGCTCCAAATTTTGATGTTCCACTGTTTCAAGTTTTACTCTCTTGCCAACTAAATGAGTTCAATTTCATCACGTGCTGTGCTTTTAATGTCCAAGGTAGTTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGTTGGTATGTGTCCTTTCACCATCTACTTGATAAAAATACTCATATTTTGTTGAAGGCTTAATCGTGATGCATTTTAATTTTAATTTTGATTTATTTTCTTGTTCGATAATCATGGTACTATGTCGTTCTGTAATATCCGTTAGGTCTTATTTTGCTTGATTAGAGGTTCTTTCTTTATCTCTTTGTGGAGGTCTTTCTTTTGTTTGCATCTTTCTTTTCTTATGCTCTTGTATTCTTTTATTTTCTTCTCAGTTCATTTTCATTTGTATTCATTTTCTTTAACACTCTTCTGATGTCATGTTAAATCACATACGTTACGATAAATTTAATTTTTCTTTTTTTATACTATCGACAACCTCCCGCTCCCAGTAAAACCCACATTAGCAAGCATTTTTATGATTTTGTCATTAGCATCTTCTGATTTTCCTGTGCCCAACAAGGATGCCTTTTGAACTTTTCAAGTCGACTAAAGTTTTTCGATTTTGAAATTGTATAAAACTTAATCGATCAACATTAACTAATTGATTCCATTTGGTATTACCAGTTTTTTTTTTTCGTGTTTTCTTTCACACCCTTAATATCTCTATTCTGATTCCATATCTACTGCCTGTGTTGACAGTAGGGCGAAAAGGTTCTTTAATTTCTTCTCTTACTTCTCATTCCAGATCTTGACTTAGAGGAATTTAGAAAGCAGAGGTTAAGACTATTTTCCAAAATTTGATAAAGATTTGAATTCCTTATTTTCATCTTCTTTGCAGGCAATACAGGAAAGCTTGTTACCACCTTCTGTTCACATGAACAGAAGGAAAAAGGCTAAAGCTTCCCAAAAGTTGGGGACCAATGGAGTTGTTAAACAAAATGGAGACAATGAGGATGTTCCATCTTTGAAATCCTCCAATGGAGAAATCCAAACGTCACGCCCCCACGTAAATGCATCGCCGGCCACCGAGTCACAGTTGAAAACTCTGTCAAGGCCATCCTCTCCTTATCCAAATGTACGTTCACTCTGCCAACTAATACATTTCAAAGTGTATATTGTTTTTCCACTCTAAGTGGGGTGGGGGGCGCTAAGCTCAGAATTAAAATACAAAACCAAGCACATCACAATTTTTGTATGTTTGACTATCTAATTCAATATGCTTCTAAACATTTAAAAAACAATCAAAAGCCCTTTGAAATGCCCCAAAGGAAACAATTTGATTAGGCTAGGTTTGGTAATCATTTAGTTTTTGGTTTTTGAAAATTAACCCTATTTTTTCTCAATTTCTTATCATGGTTTTCATCTTTTTAGGTAATAGAGTTAAATTCTTAGTCAAATTCCAAAAACAAAAATAAAATTTTAAAAACTACGACCCTATTTGGTAACAATTTGGTTTTTAAAAATTAAGCCTATAAACACATTTTCCACCTCTAAATTTCTTGCTTTGTTTACTTTATACTAATGTTTTCAAAAAAAACCAAGGGAAGTTTTGAAAATTAAAAAAAAAAAAAAAAAGTTTCTAAAAACTTGTTTTTGTTTTTGGAATTTGACTAAGAATTCAACTCAAACTTAAGAAAGATGTAAGACATTGTAAGAAATTGAGAGGAAATAGGCTAAATTTTCAAAAACTAAATGGTTAACAAAGGAGCTTATTTTTTTTTAATTTTCAAAACTTAGCTTGGTGTTTGAAAACATTGGTAGAAATTAGATTACAAAGCAATAAATTTAGCGGTGGAATGAGCATTTATAGACTTAATTTTCAAAAACCAAAAATAAAATGTTTACCAAGTGCCGTTTGTGATTTTCCTTAAATTGCTTGTATCTAAATATACTAGTTTCAAAATTATCTGAAAGTCACTCAGTTAATAGAGAATGCATGTTTCATTACTTATTGGAAACAAAATTAAATTTAACCAAGTAAAAGTTGAAACACTCTTTTTATGTATAGTGCTCTTTTGTATTTACTTTGATTGTGGATTTTCTGTGCATGTGGTTTACAAACTGACTTAATTTTCTTGAACACTGATAAATGGCAGTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGAGAAATGAAAATTCACAAGTTATTTCAGCTTACCATCTTGTTCTGCATAGAGAAGTTGACACAATATTATCAAGAGGCTGCTATTTGTTTCCATGTGGTTGTTGTAAACTCCAATTTTTTGGTAACTAGCTGTATATAATATAATATAATTTAGTCTTTTTGCATCTCAAATATTCCACAATGAATAATTACAACAGGGAAATGGAAGGGATGTTTATACATG

mRNA sequence

TTTTATCCCAATTCCCAACCAATCTCCTTTCTTCCACAGTCATTTACAGAGCTCTCTCTAATGGAGTCCCACTCCCTATACCTCTCTTCCTCCCCATTTCTCCACAGTCATCGCACAATCCACAAACTCCCTTCTCAGAAACCAATCTCTCAATCCCCTTCTCTCATTCCCTTCACCAATTCAAAACCTCTCACCGTCTTCAATGGCGCCCATTTTTCCTCCATTAACAAAACCCCATTTCCAAGCCCCACCACTCCTTCAAACCCCCATTTCCTCTTTGCAAAAACCTCCCCATTTCACCAATTAGAGAAATCCCATCTCCCTTTTGCTCTAACTCAGCTCTTCCTTCTCACCCCTCTCCCTAGCTTCGCCTTGGAAACCGACCAAGCTTCTTCTGATAAGATAAACTTGGAGTCCATTTTGGTTTCAATCGATGACTTCTTCAATAGATACCCCTTTTTTGTTGCTGGGTGTACTTTCATTTGGCTTGTTGTGATACCCTTGATTGATTACTTTTTTCTAAGAAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAAGATCCGAGATGAACCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTGGGGTCTCCTAATTTGAGGATCTTGAATAAGGATGTGTTGCAGGTTGTGTATTCAGAAGAGGATGAAGATGGGTTTTTGAAGAAGGTGAAGAACAGCTTTGGAGAGGGTGCTGATACTCTAGTCTTTGTCCTGGACAATTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGTTGGCAATACAGGAAAGCTTGTTACCACCTTCTGTTCACATGAACAGAAGGAAAAAGGCTAAAGCTTCCCAAAAGTTGGGGACCAATGGAGTTGTTAAACAAAATGGAGACAATGAGGATGTTCCATCTTTGAAATCCTCCAATGGAGAAATCCAAACGTCACGCCCCCACGTAAATGCATCGCCGGCCACCGAGTCACAGTTGAAAACTCTGTCAAGGCCATCCTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGAGAAATGAAAATTCACAAGTTATTTCAGCTTACCATCTTGTTCTGCATAGAGAAGTTGACACAATATTATCAAGAGGCTGCTATTTGTTTCCATGTGGTTGTTGTAAACTCCAATTTTTTGGTAACTAGCTGTATATAATATAATATAATTTAGTCTTTTTGCATCTCAAATATTCCACAATGAATAATTACAACAGGGAAATGGAAGGGATGTTTATACATG

Coding sequence (CDS)

ATGGAGTCCCACTCCCTATACCTCTCTTCCTCCCCATTTCTCCACAGTCATCGCACAATCCACAAACTCCCTTCTCAGAAACCAATCTCTCAATCCCCTTCTCTCATTCCCTTCACCAATTCAAAACCTCTCACCGTCTTCAATGGCGCCCATTTTTCCTCCATTAACAAAACCCCATTTCCAAGCCCCACCACTCCTTCAAACCCCCATTTCCTCTTTGCAAAAACCTCCCCATTTCACCAATTAGAGAAATCCCATCTCCCTTTTGCTCTAACTCAGCTCTTCCTTCTCACCCCTCTCCCTAGCTTCGCCTTGGAAACCGACCAAGCTTCTTCTGATAAGATAAACTTGGAGTCCATTTTGGTTTCAATCGATGACTTCTTCAATAGATACCCCTTTTTTGTTGCTGGGTGTACTTTCATTTGGCTTGTTGTGATACCCTTGATTGATTACTTTTTTCTAAGAAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAAGATCCGAGATGAACCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTGGGGTCTCCTAATTTGAGGATCTTGAATAAGGATGTGTTGCAGGTTGTGTATTCAGAAGAGGATGAAGATGGGTTTTTGAAGAAGGTGAAGAACAGCTTTGGAGAGGGTGCTGATACTCTAGTCTTTGTCCTGGACAATTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGGTCAAGAATGGCTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGTTGGCAATACAGGAAAGCTTGTTACCACCTTCTGTTCACATGAACAGAAGGAAAAAGGCTAAAGCTTCCCAAAAGTTGGGGACCAATGGAGTTGTTAAACAAAATGGAGACAATGAGGATGTTCCATCTTTGAAATCCTCCAATGGAGAAATCCAAACGTCACGCCCCCACGTAAATGCATCGCCGGCCACCGAGTCACAGTTGAAAACTCTGTCAAGGCCATCCTCTCCTTATCCAAATTACCCAGATTTGAAACCACCATCTTCTCCAACTCCCTCAAAGCCAGAGAAATGA

Protein sequence

MESHSLYLSSSPFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTPFPSPTTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTPLPSFALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGVVKQNGDNEDVPSLKSSNGEIQTSRPHVNASPATESQLKTLSRPSSPYPNYPDLKPPSSPTPSKPEK

Homology

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BLAST of Lsi02G021500 vs. Swiss-Prot
Match: STR4A_ARATH (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.1e-65
Identity = 133/232 (57.33%), Postives = 169/232 (72.84%), Query Frame = 1


Query: 75  KTSPFHQLEKSHLPFALTQLFLLTPL---PSFALETDQASSDKINLESILVSIDDFFNRY 134
           K  P H L K++L   ++QL + +P+    SF   +   SS KI+LESILV+ID+FFN+Y
Sbjct: 34  KQPPIHLLTKTNLSVTISQLIITSPVLASESFDSISSDPSSGKIDLESILVTIDNFFNKY 93

Query: 135 PFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLDIRDEKSLAFLGS 194
           PFFVAGCTF +LVV P +  F+LRKYK ISA++AFRK+++E ++QLLDIRD K+LA L S
Sbjct: 94  PFFVAGCTFTYLVVYPAV-MFYLRKYKPISAMNAFRKLKNESDSQLLDIRDVKTLALLAS 153

Query: 195 PNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGNSMKVAELLVKNG 254
           PNL+ L K  +QV +SE DE+GFL KVK SF +  +T+V VLDNFDGNS KVAELL+KNG
Sbjct: 154 PNLKFLGKSSVQVPFSENDEEGFLTKVKGSFSDAENTVVCVLDNFDGNSSKVAELLIKNG 213

Query: 255 FKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGVVKQN 304
           FKEAY I+ G RG+ GWLAIQE LLPP VHM   K  K+S     + V  +N
Sbjct: 214 FKEAYYIRGGARGKNGWLAIQEELLPPPVHMYTAKNVKSSNNNEASVVGTEN 264

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BLAST of Lsi02G021500 vs. Swiss-Prot
Match: STR4_ARATH (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=STR4 PE=1 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-25
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1


Query: 104 ALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRK----YKF 163
           AL+    +S   + + ++  I +F    P  +AG   +  + +P +    L K    +  
Sbjct: 75  ALQQSMTTSSSFDSDGLIEGISNFVTDNPLVIAGG--VAALAVPFVLSQVLNKKPKSWGV 134

Query: 164 ISAIDAFRKIRDEPNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVK 223
            SA +A+ K+  + NAQLLDIR       +GSPN++ L K  +  VY+ ED+ GFLKK+ 
Sbjct: 135 ESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLS 194

Query: 224 NSFGEGADTLVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWL 270
             F +  +T +++LD FDGNS  VAEL+  NGFK AYAIKDG  G +GWL
Sbjct: 195 LKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL 242

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BLAST of Lsi02G021500 vs. TrEMBL
Match: A0A0A0K8H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368730 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 6.1e-169
Identity = 315/366 (86.07%), Postives = 329/366 (89.89%), Query Frame = 1


Query: 1   MESHSLYLSSS-PFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTP 60
           MESHSLYLSSS P L SHR IHKL SQKPIS  PSLIPF NSKPLTVFNG  FSSIN+TP
Sbjct: 1   MESHSLYLSSSSPSLQSHRAIHKLSSQKPISPPPSLIPFANSKPLTVFNGPRFSSINRTP 60

Query: 61  FPSPTTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTPLPSFALETDQASSDKINLES 120
           FPSPT PSNP FLFAKTSPF QL K H PFALTQL LLTPLPSFALETD ASSDKI+LES
Sbjct: 61  FPSPTIPSNPPFLFAKTSPFLQLMKPHFPFALTQLLLLTPLPSFALETDLASSDKISLES 120

Query: 121 ILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLD 180
           ILVSID+FFNRYPFFVAGCTFIWLVVIP IDY+F+RKYKFISAI+AFRKIRDEPNAQLLD
Sbjct: 121 ILVSIDEFFNRYPFFVAGCTFIWLVVIPSIDYYFIRKYKFISAINAFRKIRDEPNAQLLD 180

Query: 181 IRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGN 240
           +R+EKSLA LGSPNLRILNKDV++VVYSEEDEDGF+KKVK SFG+ ADT+VFVLDNFDGN
Sbjct: 181 VREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDDADTIVFVLDNFDGN 240

Query: 241 SMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGV 300
           SMK AELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM RRKK KAS KLGTNGV
Sbjct: 241 SMKAAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASPKLGTNGV 300

Query: 301 VKQNGDNEDVPSLKSSNGEIQTSRPHVNASPATESQLKTLSRPSSPYPNYPDLKPPSSPT 360
           V+QNGDNE VPSLKSSN EIQ S  HVNAS   ESQLKT SRPSSPYPNYPDLKPPSSP 
Sbjct: 301 VQQNGDNEAVPSLKSSNREIQPSHVHVNASSPAESQLKTQSRPSSPYPNYPDLKPPSSPM 360

Query: 361 PSKPEK 366
           PSKP K
Sbjct: 361 PSKPGK 366

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BLAST of Lsi02G021500 vs. TrEMBL
Match: M5VJ90_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007412mg PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 8.1e-89
Identity = 212/377 (56.23%), Postives = 253/377 (67.11%), Query Frame = 1


Query: 1   MESHSLYLSSSPFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSI----N 60
           MES S+ LS SP L +H     L +QKP++  P  +P  NS  +++     F+S     N
Sbjct: 1   MESLSMILSCSPPLQNH-----LKTQKPVTSGPISLP-QNSTSISIVASQPFNSFPSTKN 60

Query: 61  KTPFPSPTTPSNPHFLFAKTSPFHQ-LEKSHLPFALTQLFLLTP--LPSFALETDQAS-- 120
                S  +  NP  L  KTSPF Q L ++ L F LT+L   T   LP FA E   +S  
Sbjct: 61  NLQSQSSKSVQNPS-LILKTSPFSQGLTRNRLYFLLTELITTTAFTLPGFASEAAVSSTE 120

Query: 121 --SDKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKI 180
             SD+INLE+ILVSIDDFFNR PFFVAGCTF+WLVVIPL+  + LRKYKF+  IDAFRK+
Sbjct: 121 QVSDRINLEAILVSIDDFFNRNPFFVAGCTFVWLVVIPLVQEY-LRKYKFVLVIDAFRKL 180

Query: 181 RDEPNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTL 240
           RD+PN QLLDIRDEKSL +L SPNL+ILNK  +QV +SE+DEDGF+KKV   FG  ADT 
Sbjct: 181 RDDPNVQLLDIRDEKSLKYLKSPNLKILNKATVQVPFSEDDEDGFVKKVLERFGNPADTA 240

Query: 241 VFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAK 300
           + VL NFDG S+KVAELL KNGFKEAYAIK GV G KGWL  QE+LLPPS+H+  +KK +
Sbjct: 241 LCVLGNFDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVE 300

Query: 301 ASQKLGTN-GVVKQNGDNEDVPSLKS-SNGEIQ-TSRPHVNASPATESQLKTLSRPSSPY 360
            SQK G N GVV+ N D+    S  S S GE Q T       S  + S +K   R SSPY
Sbjct: 301 TSQKTGMNGGVVRGNEDSNGAASAGSFSIGESQRTDNGRTAKSTDSVSHVKNGFRSSSPY 360

Query: 361 PNYPDLKPPSSPTPSKP 364
           P+YPDLKPPSSPTPSKP
Sbjct: 361 PSYPDLKPPSSPTPSKP 369

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BLAST of Lsi02G021500 vs. TrEMBL
Match: E0CW02_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00750 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.2e-85
Identity = 193/366 (52.73%), Postives = 237/366 (64.75%), Query Frame = 1


Query: 14  LHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTPFPSPTTPSNPH--- 73
           LHS+R    LP  KP    P ++     KP+ +         N  P   PTT   PH   
Sbjct: 4   LHSYRV---LPPSKPFQNHPKIL-----KPIALLP-------NSIPINKPTTAHPPHNHL 63

Query: 74  FLFAKTSPFHQ----------LEKSHLPFALTQLFLLTPLPSFALETDQASSDKINLESI 133
           F+F  +SP             L+   +P  L  L    PLP FA ET  +++DKINLESI
Sbjct: 64  FIFKTSSPSPSPSPAFLSQFPLKPDKIPHLLLGLSSFAPLPCFASETVVSANDKINLESI 123

Query: 134 LVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLDI 193
           +VSIDDFFNR PFFVAG TFIWLVV+PL   + L+K+KFISAI+AFRK+RD+PNAQLLDI
Sbjct: 124 VVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEY-LKKFKFISAINAFRKLRDDPNAQLLDI 183

Query: 194 RDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGNS 253
           RD KSLA+LGSPNL+ILNK V+QV +S++DED FLK V   F +  +T V VLDNFDGNS
Sbjct: 184 RDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFLKVVSTKFADPNNTTVCVLDNFDGNS 243

Query: 254 MKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGVV 313
           MKVAELL KNGFKEAYAI+ G+RG+ GW AIQE+LLPPSVH+  +KK K S++   NG +
Sbjct: 244 MKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENLLPPSVHIYPKKKVKMSRQPEVNGGI 303

Query: 314 KQNGDNEDVPSLKSS---NGEIQTSRPHVNASPATESQLKTLSRPSSPYPNYPDLKPPSS 364
              G++    S  +S   +        +V     +  Q K  SR SSPYPNYPDLKPPSS
Sbjct: 304 IIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKSTPQAKLGSRSSSPYPNYPDLKPPSS 353

[Close]

BLAST of Lsi02G021500 vs. TrEMBL
Match: W9QZC5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007426 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 3.2e-85
Identity = 213/389 (54.76%), Postives = 257/389 (66.07%), Query Frame = 1


Query: 1   MESHSLYLSSSPFLHSHRTIHKLPSQKPISQSP-SLIPFTNSKPLTVFNGAHFSSINKTP 60
           MES +     SP + +H     L +QKP++  P SL+     KPL+    +  S+  +T 
Sbjct: 39  MESLATLFFRSPPIKNH-----LKTQKPLTSKPFSLL----HKPLST---SQTSNSRETH 98

Query: 61  FPS----------PTT-PSNPHFLFAKTSPFHQ-LEKSHLPFALTQLFLLTP----LPSF 120
           FPS          PT+ P   H +  K+S F Q L ++HL F L+ L   T     LP  
Sbjct: 99  FPSSENTHILLRNPTSDPLQRHQILLKSSSFFQPLSETHLSFVLSGLITATTTLYSLPCS 158

Query: 121 ALETDQAS----SDKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKF 180
           A E+  +S    SDKINLESILVSID FFNRYPFFVAGCTFIWL VIP+   +F RKYKF
Sbjct: 159 ASESVVSSTEQVSDKINLESILVSIDGFFNRYPFFVAGCTFIWLFVIPVTQGYF-RKYKF 218

Query: 181 ISAIDAFRKIRDEPNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVK 240
           I AIDAFRK+RD+PN QLLDIR+EK L  L SPNL+ILNK  +QV +SE+DEDGF+KKV 
Sbjct: 219 IYAIDAFRKLRDDPNVQLLDIREEKILRSLKSPNLKILNKSAVQVPFSEDDEDGFVKKVL 278

Query: 241 NSFGEGADTLVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPS 300
            +F E   T+V +LDN DGNSMKVAELL KNGFK AYAIK GV G+KGWL IQE+LLPPS
Sbjct: 279 GNFKEPEYTVVCILDNLDGNSMKVAELLFKNGFKAAYAIKGGVAGKKGWLEIQETLLPPS 338

Query: 301 VHMNRRKKAKASQKLGTNG-VVKQNGDNEDVPSLKSSNGEIQTSRPHVNASPATESQL-- 360
           +H+  +KK KASQ+LG NG V++ N DN  +       GE Q S  H   + +T S L  
Sbjct: 339 LHIYPQKKRKASQELGENGRVIRSNEDNGAI-------GESQGS-DHAQVANSTMSTLDK 398

Query: 361 KTLSRPSSPYPNYPDLKPPSSPTPSKPEK 366
           K  +R SSPYPNYPDLKPPSSPTPSKP K
Sbjct: 399 KNGARSSSPYPNYPDLKPPSSPTPSKPSK 406

[Close]

BLAST of Lsi02G021500 vs. TrEMBL
Match: A0A059A4G8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02359 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-82
Identity = 193/374 (51.60%), Postives = 237/374 (63.37%), Query Frame = 1


Query: 1   MESHSLYLSSS---PFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINK 60
           MES S+ LSSS   PFL+  + +    S +PIS                           
Sbjct: 1   MESLSIILSSSSSLPFLNHPKALKPTSSSRPIS--------------------------- 60

Query: 61  TPFPSPTTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTPLPSFALETDQAS-----S 120
            P PS +TP NPHFL  K   F  L  +  P       L   LP  A E   +      S
Sbjct: 61  LPMPSISTPENPHFLLLKGRSF-PLHFTRAPLCFPLFHLFNSLPCLASEGALSPAAGQVS 120

Query: 121 DKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDE 180
           D+INLES+LVSIDDFFNR PFFVAGCTF+WLVV+P+ +Y+ LRKYK++SAIDAFRK+RD+
Sbjct: 121 DRINLESVLVSIDDFFNRNPFFVAGCTFVWLVVVPVAEYY-LRKYKYVSAIDAFRKLRDD 180

Query: 181 PNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFV 240
           P+AQLLDIRD KS+A + SP+L  ++K  + V + E  ED F K V  SF + ADT++ +
Sbjct: 181 PSAQLLDIRDRKSVAAMASPDLMYVSKAAVHVPFDEGREDEFAKAVLASFEDPADTVLCI 240

Query: 241 LDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQ 300
           LDNFDGNSMKVAELL KNGFKEAYAIK GVRGEKGWLAIQESLLPPSVHM+ +KK+K  +
Sbjct: 241 LDNFDGNSMKVAELLFKNGFKEAYAIKGGVRGEKGWLAIQESLLPPSVHMSPKKKSK--R 300

Query: 301 KLGTNGVVKQNGDN--EDVPSLKSSNGEIQT-SRPHVNASPATESQLKTLSRPSSPYPNY 360
           + G NG V Q   N  E   S   + GE Q     + +A        +T+SR SSPYPNY
Sbjct: 301 EFGMNGAVSQKNGNKAEGSSSPTVAEGENQVLDHGNQDAMAVPTPSERTVSRSSSPYPNY 343

Query: 361 PDLKPPSSPTPSKP 364
           P++KPP+SPTPSKP
Sbjct: 361 PEMKPPASPTPSKP 343

[Close]

BLAST of Lsi02G021500 vs. TAIR10
Match: AT3G25480.1 (AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-66
Identity = 133/232 (57.33%), Postives = 169/232 (72.84%), Query Frame = 1


Query: 75  KTSPFHQLEKSHLPFALTQLFLLTPL---PSFALETDQASSDKINLESILVSIDDFFNRY 134
           K  P H L K++L   ++QL + +P+    SF   +   SS KI+LESILV+ID+FFN+Y
Sbjct: 34  KQPPIHLLTKTNLSVTISQLIITSPVLASESFDSISSDPSSGKIDLESILVTIDNFFNKY 93

Query: 135 PFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLDIRDEKSLAFLGS 194
           PFFVAGCTF +LVV P +  F+LRKYK ISA++AFRK+++E ++QLLDIRD K+LA L S
Sbjct: 94  PFFVAGCTFTYLVVYPAV-MFYLRKYKPISAMNAFRKLKNESDSQLLDIRDVKTLALLAS 153

Query: 195 PNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGNSMKVAELLVKNG 254
           PNL+ L K  +QV +SE DE+GFL KVK SF +  +T+V VLDNFDGNS KVAELL+KNG
Sbjct: 154 PNLKFLGKSSVQVPFSENDEEGFLTKVKGSFSDAENTVVCVLDNFDGNSSKVAELLIKNG 213

Query: 255 FKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGVVKQN 304
           FKEAY I+ G RG+ GWLAIQE LLPP VHM   K  K+S     + V  +N
Sbjct: 214 FKEAYYIRGGARGKNGWLAIQEELLPPPVHMYTAKNVKSSNNNEASVVGTEN 264

[Close]

BLAST of Lsi02G021500 vs. TAIR10
Match: AT4G01050.1 (AT4G01050.1 thylakoid rhodanese-like)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-26
Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1


Query: 104 ALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRK----YKF 163
           AL+    +S   + + ++  I +F    P  +AG   +  + +P +    L K    +  
Sbjct: 75  ALQQSMTTSSSFDSDGLIEGISNFVTDNPLVIAGG--VAALAVPFVLSQVLNKKPKSWGV 134

Query: 164 ISAIDAFRKIRDEPNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVK 223
            SA +A+ K+  + NAQLLDIR       +GSPN++ L K  +  VY+ ED+ GFLKK+ 
Sbjct: 135 ESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLS 194

Query: 224 NSFGEGADTLVFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWL 270
             F +  +T +++LD FDGNS  VAEL+  NGFK AYAIKDG  G +GWL
Sbjct: 195 LKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL 242

[Close]

BLAST of Lsi02G021500 vs. NCBI nr
Match: gi|659116494|ref|XP_008458097.1| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis melo])

HSP 1 Score: 615.9 bits (1587), Expect = 4.5e-173
Identity = 320/364 (87.91%), Postives = 335/364 (92.03%), Query Frame = 1


Query: 1   MESHSLYLSSS-PFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTP 60
           MESHSLYLSSS PFL SHRTIHKL S+KPIS+ PSLIPF NSKPLTVFNG HFSSIN+T 
Sbjct: 1   MESHSLYLSSSSPFLSSHRTIHKLSSEKPISRPPSLIPFANSKPLTVFNGPHFSSINRTS 60

Query: 61  FPSPTTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTPLPSFALETDQASSDKINLES 120
           FPSPT PSNP FLFAKTSP  QL K H PFALTQL LLTPLPSFALETD ASSDKINLES
Sbjct: 61  FPSPTIPSNPRFLFAKTSPILQLTKPHFPFALTQLLLLTPLPSFALETDLASSDKINLES 120

Query: 121 ILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLD 180
           ILVSID+FFNRYPFFVAGCTFIWLVVIPLIDY+F+RKYKFISAIDAFRKIRDEPNAQLLD
Sbjct: 121 ILVSIDEFFNRYPFFVAGCTFIWLVVIPLIDYYFIRKYKFISAIDAFRKIRDEPNAQLLD 180

Query: 181 IRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGN 240
           +R+EKSLA LGSPNLRILNKDV++VVYSEEDEDGF+KKVK SFG+ ADT+VFVLDNFDGN
Sbjct: 181 VREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDCADTIVFVLDNFDGN 240

Query: 241 SMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGV 300
           SMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM RRKK KASQKLGTNGV
Sbjct: 241 SMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASQKLGTNGV 300

Query: 301 VKQNGDNEDVPSLKSSNGEIQTSRPHVNASPATESQLKTLSRPSSPYPNYPDLKPPSSPT 360
           V+QNGDNE VPSLKSSN EIQ S+ HVNAS   ESQLKT SRPSSPYPNYPDLKPPSSPT
Sbjct: 301 VQQNGDNETVPSLKSSNREIQPSQVHVNASSPAESQLKTWSRPSSPYPNYPDLKPPSSPT 360

Query: 361 PSKP 364
           PSKP
Sbjct: 361 PSKP 364

[Close]

BLAST of Lsi02G021500 vs. NCBI nr
Match: gi|778727151|ref|XP_004149316.2| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 8.7e-169
Identity = 315/366 (86.07%), Postives = 329/366 (89.89%), Query Frame = 1


Query: 1   MESHSLYLSSS-PFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTP 60
           MESHSLYLSSS P L SHR IHKL SQKPIS  PSLIPF NSKPLTVFNG  FSSIN+TP
Sbjct: 1   MESHSLYLSSSSPSLQSHRAIHKLSSQKPISPPPSLIPFANSKPLTVFNGPRFSSINRTP 60

Query: 61  FPSPTTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTPLPSFALETDQASSDKINLES 120
           FPSPT PSNP FLFAKTSPF QL K H PFALTQL LLTPLPSFALETD ASSDKI+LES
Sbjct: 61  FPSPTIPSNPPFLFAKTSPFLQLMKPHFPFALTQLLLLTPLPSFALETDLASSDKISLES 120

Query: 121 ILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEPNAQLLD 180
           ILVSID+FFNRYPFFVAGCTFIWLVVIP IDY+F+RKYKFISAI+AFRKIRDEPNAQLLD
Sbjct: 121 ILVSIDEFFNRYPFFVAGCTFIWLVVIPSIDYYFIRKYKFISAINAFRKIRDEPNAQLLD 180

Query: 181 IRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVLDNFDGN 240
           +R+EKSLA LGSPNLRILNKDV++VVYSEEDEDGF+KKVK SFG+ ADT+VFVLDNFDGN
Sbjct: 181 VREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDDADTIVFVLDNFDGN 240

Query: 241 SMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQKLGTNGV 300
           SMK AELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHM RRKK KAS KLGTNGV
Sbjct: 241 SMKAAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASPKLGTNGV 300

Query: 301 VKQNGDNEDVPSLKSSNGEIQTSRPHVNASPATESQLKTLSRPSSPYPNYPDLKPPSSPT 360
           V+QNGDNE VPSLKSSN EIQ S  HVNAS   ESQLKT SRPSSPYPNYPDLKPPSSP 
Sbjct: 301 VQQNGDNEAVPSLKSSNREIQPSHVHVNASSPAESQLKTQSRPSSPYPNYPDLKPPSSPM 360

Query: 361 PSKPEK 366
           PSKP K
Sbjct: 361 PSKPGK 366

[Close]

BLAST of Lsi02G021500 vs. NCBI nr
Match: gi|694429734|ref|XP_009342380.1| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 345.9 bits (886), Expect = 8.6e-92
Identity = 209/372 (56.18%), Postives = 258/372 (69.35%), Query Frame = 1


Query: 1   MESHSLYLSSSPFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTPF 60
           MES S+ LS SP   +H     L +QKP +  P+ +P T + P    + +   + +++ F
Sbjct: 1   MESLSMILSFSPPPQNH-----LKAQKPSTSPPTSLPQTTTIP--AISTSLLPNSSQSQF 60

Query: 61  PSP-TTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTP--LPSFALETDQAS----SD 120
           PS   TP  P FL   T   H+L K+ L F LT+L   TP  LPSFA E+  ++    SD
Sbjct: 61  PSTKNTPHTPIFLLKPTHFPHRLPKTQLKFLLTELIATTPFALPSFASESAASAPEQVSD 120

Query: 121 KINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEP 180
           KINLESILVSIDDFFNR PFFVAGCTF+WLVVIPL+  + LRKYKF+  IDAFRK+RD+P
Sbjct: 121 KINLESILVSIDDFFNRNPFFVAGCTFVWLVVIPLVQAY-LRKYKFVLVIDAFRKLRDDP 180

Query: 181 NAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVL 240
           NAQLLDIRDEKSL +L SPNL+ILNK  +QV +SE+DE GF+K+V   F   A+T++ +L
Sbjct: 181 NAQLLDIRDEKSLGYLKSPNLKILNKGTVQVPFSEDDEAGFVKRVLERFANPAETVLCIL 240

Query: 241 DNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQK 300
            NFDG S+KVAELL KNGFKEAYAIK GV G KGWL  QE+LLPPS+H+  +KK K +Q+
Sbjct: 241 GNFDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVKTTQE 300

Query: 301 LGTNGVVKQNGD-NEDVPSLKSSNGEIQTS-RPHVNASPATESQLKTLSRPSSPYPNYPD 360
             TNGVV++  D N  V S   S GE QT+     N S  + SQ+K  SR SSPY +YPD
Sbjct: 301 TVTNGVVREKEDSNGAVTSRNLSTGESQTTDNGRTNKSTDSASQMKNGSRSSSPYSSYPD 360

Query: 361 LKPPSSPTPSKP 364
           LKPPSSPTPSKP
Sbjct: 361 LKPPSSPTPSKP 364

[Close]

BLAST of Lsi02G021500 vs. NCBI nr
Match: gi|657981065|ref|XP_008382545.1| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Malus domestica])

HSP 1 Score: 342.8 bits (878), Expect = 7.3e-91
Identity = 211/372 (56.72%), Postives = 254/372 (68.28%), Query Frame = 1


Query: 1   MESHSLYLSSSPFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSINKTPF 60
           MES S+ LS SP   +H     L +QKP +  P+ +P T + P    +    SS     F
Sbjct: 1   MESLSMILSFSPPPQNH-----LKAQKPSTSPPTSLPQTTTIPAISTSLPPNSS--HAQF 60

Query: 61  PSP-TTPSNPHFLFAKTSPFHQLEKSHLPFALTQLFLLTP--LPSFALETDQAS----SD 120
           PS   TP  P FL   T   H+L K+ L F LT+L   TP  LPSFA E+  ++    SD
Sbjct: 61  PSTKNTPHTPIFLLKPTHFPHRLPKTQLTFLLTELIATTPFALPSFASESAASAPEQVSD 120

Query: 121 KINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKIRDEP 180
           KINLES+LVSIDDFFNR PFFVAGCTF+WLVVIPL+  + LRKYKF+  IDAFRK+RD+P
Sbjct: 121 KINLESVLVSIDDFFNRNPFFVAGCTFVWLVVIPLVQAY-LRKYKFVLVIDAFRKLRDDP 180

Query: 181 NAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTLVFVL 240
           NAQLLDIRD+KSL +L SPNL+ILNK  +QV +SE+DE GF+K+V   F   A+T++ VL
Sbjct: 181 NAQLLDIRDQKSLGYLKSPNLKILNKGTVQVPFSEDDEAGFVKRVLERFANPAETVLCVL 240

Query: 241 DNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAKASQK 300
            NFDG S+KVAELL KNGFKEAYAIK GV G KGWL  QE+LLPPS+H+  +KK K SQ+
Sbjct: 241 GNFDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVKTSQE 300

Query: 301 LGTNGVVKQNGD-NEDVPSLKSSNGEIQTS-RPHVNASPATESQLKTLSRPSSPYPNYPD 360
             TNGVV+   D N  V S   S GE QT+       S  + SQ+K  SR SSPYP+YPD
Sbjct: 301 TVTNGVVRGKEDSNGAVTSRNLSTGESQTTDNGRTTKSTDSASQMKNGSRSSSPYPSYPD 360

Query: 361 LKPPSSPTPSKP 364
           LKPPSSPTPSKP
Sbjct: 361 LKPPSSPTPSKP 364

[Close]

BLAST of Lsi02G021500 vs. NCBI nr
Match: gi|595792369|ref|XP_007199933.1| (hypothetical protein PRUPE_ppa007412mg [Prunus persica])

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 212/377 (56.23%), Postives = 253/377 (67.11%), Query Frame = 1


Query: 1   MESHSLYLSSSPFLHSHRTIHKLPSQKPISQSPSLIPFTNSKPLTVFNGAHFSSI----N 60
           MES S+ LS SP L +H     L +QKP++  P  +P  NS  +++     F+S     N
Sbjct: 1   MESLSMILSCSPPLQNH-----LKTQKPVTSGPISLP-QNSTSISIVASQPFNSFPSTKN 60

Query: 61  KTPFPSPTTPSNPHFLFAKTSPFHQ-LEKSHLPFALTQLFLLTP--LPSFALETDQAS-- 120
                S  +  NP  L  KTSPF Q L ++ L F LT+L   T   LP FA E   +S  
Sbjct: 61  NLQSQSSKSVQNPS-LILKTSPFSQGLTRNRLYFLLTELITTTAFTLPGFASEAAVSSTE 120

Query: 121 --SDKINLESILVSIDDFFNRYPFFVAGCTFIWLVVIPLIDYFFLRKYKFISAIDAFRKI 180
             SD+INLE+ILVSIDDFFNR PFFVAGCTF+WLVVIPL+  + LRKYKF+  IDAFRK+
Sbjct: 121 QVSDRINLEAILVSIDDFFNRNPFFVAGCTFVWLVVIPLVQEY-LRKYKFVLVIDAFRKL 180

Query: 181 RDEPNAQLLDIRDEKSLAFLGSPNLRILNKDVLQVVYSEEDEDGFLKKVKNSFGEGADTL 240
           RD+PN QLLDIRDEKSL +L SPNL+ILNK  +QV +SE+DEDGF+KKV   FG  ADT 
Sbjct: 181 RDDPNVQLLDIRDEKSLKYLKSPNLKILNKATVQVPFSEDDEDGFVKKVLERFGNPADTA 240

Query: 241 VFVLDNFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMNRRKKAK 300
           + VL NFDG S+KVAELL KNGFKEAYAIK GV G KGWL  QE+LLPPS+H+  +KK +
Sbjct: 241 LCVLGNFDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVE 300

Query: 301 ASQKLGTN-GVVKQNGDNEDVPSLKS-SNGEIQ-TSRPHVNASPATESQLKTLSRPSSPY 360
            SQK G N GVV+ N D+    S  S S GE Q T       S  + S +K   R SSPY
Sbjct: 301 TSQKTGMNGGVVRGNEDSNGAASAGSFSIGESQRTDNGRTAKSTDSVSHVKNGFRSSSPY 360

Query: 361 PNYPDLKPPSSPTPSKP 364
           P+YPDLKPPSSPTPSKP
Sbjct: 361 PSYPDLKPPSSPTPSKP 369

The following BLAST results are available for this feature:

BLAST of Lsi02G021500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STR4A_ARATH	3.1e-65	57.33	Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thalia...	[more]
STR4_ARATH	1.8e-25	38.82	Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of Lsi02G021500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8H6_CUCSA	6.1e-169	86.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368730 PE=4 SV=1	[more]
M5VJ90_PRUPE	8.1e-89	56.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007412mg PE=4 SV=1	[more]
E0CW02_VITVI	3.2e-85	52.73	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00750 PE=4 SV=...	[more]
W9QZC5_9ROSA	3.2e-85	54.76	Uncharacterized protein OS=Morus notabilis GN=L484_007426 PE=4 SV=1	[more]
A0A059A4G8_EUCGR	1.5e-82	51.60	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K02359 PE=4 SV=1	[more]

BLAST of Lsi02G021500 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25480.1	1.7e-66	57.33	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT4G01050.1	1.0e-26	38.82	thylakoid rhodanese-like	[more]

BLAST of Lsi02G021500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116494\|ref\|XP_008458097.1\|	4.5e-173	87.91	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis m...	[more]
gi\|778727151\|ref\|XP_004149316.2\|	8.7e-169	86.07	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis s...	[more]
gi\|694429734\|ref\|XP_009342380.1\|	8.6e-92	56.18	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Pyrus x b...	[more]
gi\|657981065\|ref\|XP_008382545.1\|	7.3e-91	56.72	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Malus dom...	[more]
gi\|595792369\|ref\|XP_007199933.1\|	1.2e-88	56.23	hypothetical protein PRUPE_ppa007412mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001763	Rhodanese-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G021500.1	Lsi02G021500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	GENE3D	G3DSA:3.40.250.10		coord: 156..281 score: 3.6
IPR001763	Rhodanese-like domain	PROFILE	PS50206	RHODANESE_3	coord: 171..273 score: 8
IPR001763	Rhodanese-like domain	unknown	SSF52821	Rhodanese/Cell cycle control phosphatase	coord: 146..263 score: 1.8
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 161..277 score: 1.1
None	No IPR available	PANTHER	PTHR11177:SF167	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 161..277 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G021500	Csa7G368730	Cucumber (Chinese Long) v2	culsiB503
Lsi02G021500	CSPI07G14950	Wild cucumber (PI 183967)	cpilsiB517
Lsi02G021500	Cucsa.387900	Cucumber (Gy14) v1	cgylsiB631
Lsi02G021500	CmaCh17G013010	Cucurbita maxima (Rimu)	cmalsiB346
Lsi02G021500	CmoCh17G012730	Cucurbita moschata (Rifu)	cmolsiB334
Lsi02G021500	Cla014886	Watermelon (97103) v1	lsiwmB175
Lsi02G021500	MELO3C021127	Melon (DHL92) v3.5.1	lsimeB187
Lsi02G021500	ClCG09G008340	Watermelon (Charleston Gray)	lsiwcgB159
Lsi02G021500	MELO3C021127.2	Melon (DHL92) v3.6.1	lsimedB197
Lsi02G021500	Cla97C09G171080	Watermelon (97103) v2	lsiwmbB212
Lsi02G021500	Bhi09G001033	Wax gourd	lsiwgoB281
Lsi02G021500	Cp4.1LG12g10860	Cucurbita pepo (Zucchini)	cpelsiB111
Lsi02G021500	CsGy7G013460	Cucumber (Gy14) v2	cgyblsiB472
Lsi02G021500	Carg11482	Silver-seed gourd	carlsiB012
Lsi02G021500	CsaV3_7G026740	Cucumber (Chinese Long) v3	cuclsiB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G021500	Silver-seed gourd	carlsiB074
Lsi02G021500	Cucurbita maxima (Rimu)	cmalsiB822
Lsi02G021500	Cucurbita moschata (Rifu)	cmolsiB809
Lsi02G021500	Cucurbita pepo (Zucchini)	cpelsiB258