Cp4.1LG12g10860 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g10860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Rhodanese-like
Location	Cp4.1LG12 : 9206835 .. 9210770 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGACCTAACTCAAAATGAGCCGTTAATAACCATAAATATAGAATGTATAAATGATCAGCTAATAACCATAAATATAGAATGTATAGATAAATAGAAATGTCTATTTAACTGGCTTACTTCAGTCTCCTAATTAATTATAAAATAAAGATTAAAATAAATAGTATTTCAACCGAATTAAATTTTCCCTGCGGACAGAAAAATAGATAGTATGGATCAATTATTTTTATTTATTTAGAATAAAAATCAATTTACAGATTAGATTGGGTTGGATTTTATCCCAACCCGTCTCCCATTCTTCCAGACATTACAGAGCTCTCTAATGGAGTCGCACTCCCTCTACCTCTCCTCTTCCTCCCTATTTCTCCACAAACTTCCCTCTCTCAAACCAATCTCTCTATCCCCTTCGCTCATTCCCTTCAATTCAAAACCTCTCAGCGTCTTCAATGGCGCCCATCTTCCCACCATTAACAAAACCCCGTTTCAAAACCCTTCCAATCCTTCAACAAAGCCTCTCAAAAACCCCCATTTCCTCTTCGCAAAAACCTCCCCATTTCACCAATTGGTGAAATCCCATCTCCCTTTTGCTCTTACTCAGCTCCTTCTCTCCCCTCTCCCTAGCCTCGCCTTGGAAACCGACCAAGCTTCTTCCGATAAGATAAACTTGGAGTCCATTTTAGTTTCGATTGATGACTTTTTCAACCGATACCCATTTTTTGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTATTTTCTAAGGAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAGAATTCGGGATGACCCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTAGGGTCTCCCAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTATTCAGAGGAGGATCAAGATGGGTTTGTGAAGAAGGTGAAGAACGGCTTTGGAGATGGTGCTGATACTCGAGTATTTGTCCTGGACAAGTAAGTTGTTTCCATTTACTTCAAATGAAAATGGATTTGTGTGATCTTCATACTTTTATTTTAGTTTTTTGCACGCTGGAGGCAGTGGGGAAGATGGAGAGAGATGAGCGAGGGAGGCCAAGAGAGTGAAACATGGGAGAGAGGAAGATTGAGAGAGGGAAAGTGTAACAGCCCCAGCCTACCGCTGGGCTAGCAGATATTGTTCGCTTTGACCCATTACCCGTTAGCCTCACGGTTCTAAAACATGTCTGCTTGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGTTTCACTCTCCAACAGACGTGGGATCTCACAATGTGGAAACTTCTCCCTAGTAGATGCATTTTAAAACCGTGAGGGTGATGACAATACATAACGGGCCAAAGCAGACAATATCTGCTAGAGGTAGATTAAGCTGTTACAGAAAGAGAGAAAGAGAGTAATATGGTGTACTCCATAAATGTGCAGACTTCAATAGCTAACACTGTTGTAGTTATCATGGCCTGAGTCATGTCTTATGGTTTTCCTATTTAGCTAATGGGGCCTAAAACTAAACGGAAGACCCCGAATTTCACTGTTTCAAACTTTGCTGTCTTCCCAATTATATGAGTTCAATTCATAACGTGCTACGCTTTTAATGTCTAAGGTAGTTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGTTCAAGAATGGGTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGTTGGTATGTGTCCTCCTTTTGCTAATCTACTTGATGAATATACTCATGTTTTAGTTGAAGGCTTAATCATGATGCGTTGTAATGTTTATTTTGATTTGTTTTCTTGCCTCCTTTTTGGGGGCTCTTTCTTCTGGTGGCCCCTTAGTTTTGGTATTCTTTCATTTTTTCTCTCAATGAAGTTGGGTTATTCATTGAAAAAAGAGAGTAACGAAAAGTGGGGAAAAATAGCTAAACATCGAAAGCCAAGGTCATCCTCGGGCCTCGTCCTCTTCTAAATCAATGTACCTCCTTCGACATTCTACTCAGGATCTTCAATATTCCCATGTTCGATCTCTTCCATCTCTACCTTGCTCGTGTCCATTTCCTATTAACCACAATCATCATCGTGTTACTTTTCTCTTCTAGGTGGTGGAGTCGAGTGGGTTTCCTAACTCGAGAACTTAGAGGCAAAAATGGTTGACGTTCCTCTAGACACGGTTGGTAGAGCTTGCTTTATGCTTCTCTAGTACCACTAGCATAGGCTACATCCTACAATCACCTATTGTCATAATCCAACTCATCTTCTCTTGGTCATTTTCTTCCTCCATCATTCAAACCAACCATTATTTATGCTTAGAATATGATCCAAAGGTATTGGGTCAAGTCGATTTCTTTATATCAAGGTGTTGTATAAGGAGATACAAGACTCAGCCCATCTATCCACTCTTGGTTGATTGTGCAAGTATATTGAATCTTGTTAGATGACTAATCAACCTAAAAGCTTGAGTTGATGGATTAAGGTAAATTTGATTATATCATTTGTGGATTCCCTATTAGTTGGAGCGGAATTGACTTTAAAGGGGTTCGAATACAAGACCTCTTGCTTTGATCCAATGTTAAATCAGGTTGGCAAGATAGGCGATGGTTCGTTAACCGTCACACCCTTTTATCTTGGCTTCTTAATTTCTAATTGATTTCCATTTTTGTTTGTCCTACGAGAGTTCCAACCTGTTTCCCCACAAGTCATACGATCACTTATTCTTGTTCTGTTATGAAGCTCTTGGGATTTGATCTAACAACCTTGTTGAAGAATAAGACCTTTAGATCTAAATTATTCAAGAACCCCAAAAACGATAAGAATTCATCCCAAGGAACTTCTCAAATCGACCGAAGTTTTTTCATTTTGAAAGTGTATAAAACTTAATCAACCAACGTTAACTATTTGATTCAAGTTAGTACAGCAGTTTTTTTTCGAGTTTTCATTCTCACCCTTAATTTCTCTGTTCAGATTCCATACCTACTACCTGTGTTGATAGTAGGATGAAAAGGTTCTTTAATTTCTTTTCTTTCCAAATCATGACTTGGTGGAATTTAGAAAGCAGAGGTTAGACTCTATTCTAATTTAGGTAAAGCTTTCTGTTACTTATTTTCATCCTCTTTGCAGGCGATACAGGAGTCCTTGTTACCGCCTTCTGTTCACATTAGCAGAAGGAAAAAGGCTAAAGCTTCCAAAAAGTTTGGGACTAATGGAGTTGTTCAACAAAGTGTAGACAAAGAGGCTGTTCCATCTTTGAAATCCTCCAATGGAGATATCCAAACTTCACCCATCCATGTCAATGCATCGTCAGACACCGAGTCCAAGTTGAAAACTCGGTCAAGGTCATCGTCTCCTTATCCAAACGTAAGTTCACTCTGTCAACTAATACATCTTTAAGTATGAACTGATTTTTCACTCTTTATAAGTAGAGAAAAAGAAGGTCTAAGCTCAATTAACATACAAAAGCACATTGTAATTTTTGTATGTTAGATTATCTAGTCCAATATGCTTCTAAGCAATATAAAAACAATCAAAAGCCTTGGAAATGCCTCAAAGGAAACCATTTAATTGGTGGTTTTCCTTAAAACTGCTTGTATCAAGTGTTTCATCTAAAAACACAAGCTTCAAAATTGTCTGAAAGTCACTCAATTAATAGACAATGCATGCTTCATTACATATTGGAGACAATATTAAATTTGATTCAGTAAAAGATGAGTCATGATTTAGTGTTTGTATTTACTTTCATTGTGGATTTTCTGTGCATGTGATTTATAGACTGACTCCGTTTTCTATAACACTGATATATGGCAGTACCCAGATTTGAAACCACCATCTTCTCCCACTCCCTCAAAGCCAAGGAAATGA

mRNA sequence

AGAGACCTAACTCAAAATGAGCCGTTAATAACCATAAATATAGAATGTATAAATGATCAGCTAATAACCATAAATATAGAATGTATAGATAAATAGAAATGTCTATTTAACTGGCTTACTTCAGTCTCCTAATTAATTATAAAATAAAGATTAAAATAAATAGTATTTCAACCGAATTAAATTTTCCCTGCGGACAGAAAAATAGATAGTATGGATCAATTATTTTTATTTATTTAGAATAAAAATCAATTTACAGATTAGATTGGGTTGGATTTTATCCCAACCCGTCTCCCATTCTTCCAGACATTACAGAGCTCTCTAATGGAGTCGCACTCCCTCTACCTCTCCTCTTCCTCCCTATTTCTCCACAAACTTCCCTCTCTCAAACCAATCTCTCTATCCCCTTCGCTCATTCCCTTCAATTCAAAACCTCTCAGCGTCTTCAATGGCGCCCATCTTCCCACCATTAACAAAACCCCGTTTCAAAACCCTTCCAATCCTTCAACAAAGCCTCTCAAAAACCCCCATTTCCTCTTCGCAAAAACCTCCCCATTTCACCAATTGGTGAAATCCCATCTCCCTTTTGCTCTTACTCAGCTCCTTCTCTCCCCTCTCCCTAGCCTCGCCTTGGAAACCGACCAAGCTTCTTCCGATAAGATAAACTTGGAGTCCATTTTAGTTTCGATTGATGACTTTTTCAACCGATACCCATTTTTTGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTATTTTCTAAGGAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAGAATTCGGGATGACCCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTAGGGTCTCCCAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTATTCAGAGGAGGATCAAGATGGGTTTGTGAAGAAGGTGAAGAACGGCTTTGGAGATGGTGCTGATACTCGAGTATTTGTCCTGGACAATTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGTTCAAGAATGGGTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGTTGGCGATACAGGAGTCCTTGTTACCGCCTTCTGTTCACATTAGCAGAAGGAAAAAGGCTAAAGCTTCCAAAAAGTTTGGGACTAATGGAGTTGTTCAACAAAGTGTAGACAAAGAGGCTGTTCCATCTTTGAAATCCTCCAATGGAGATATCCAAACTTCACCCATCCATGTCAATGCATCGTCAGACACCGAGTCCAAGTTGAAAACTCGGTCAAGGTCATCGTCTCCTTATCCAAACACTGACTCCGTTTTCTATAACACTGATATATGGCAGTACCCAGATTTGAAACCACCATCTTCTCCCACTCCCTCAAAGCCAAGGAAATGA

Coding sequence (CDS)

ATGGAGTCGCACTCCCTCTACCTCTCCTCTTCCTCCCTATTTCTCCACAAACTTCCCTCTCTCAAACCAATCTCTCTATCCCCTTCGCTCATTCCCTTCAATTCAAAACCTCTCAGCGTCTTCAATGGCGCCCATCTTCCCACCATTAACAAAACCCCGTTTCAAAACCCTTCCAATCCTTCAACAAAGCCTCTCAAAAACCCCCATTTCCTCTTCGCAAAAACCTCCCCATTTCACCAATTGGTGAAATCCCATCTCCCTTTTGCTCTTACTCAGCTCCTTCTCTCCCCTCTCCCTAGCCTCGCCTTGGAAACCGACCAAGCTTCTTCCGATAAGATAAACTTGGAGTCCATTTTAGTTTCGATTGATGACTTTTTCAACCGATACCCATTTTTTGTTGCTGGGTGTACTTTCATTTGGCTTGTTGGGATACCCTTGATTGACTACTATTTTCTAAGGAAGTACAAGTTCATTTCTGCCATTGATGCGTTTCGCAGAATTCGGGATGACCCAAATGCACAGCTCTTGGATATTAGAGATGAAAAGAGCTTGGCGTTTTTAGGGTCTCCCAATTTGAGGATTTTGAATAAGGATGTGGTGCAGGTTGTGTATTCAGAGGAGGATCAAGATGGGTTTGTGAAGAAGGTGAAGAACGGCTTTGGAGATGGTGCTGATACTCGAGTATTTGTCCTGGACAATTTTGATGGTAACTCCATGAAAGTGGCCGAGTTATTGTTCAAGAATGGGTTCAAGGAGGCTTATGCAATCAAGGATGGTGTTAGGGGCGAAAAAGGGTGGTTGGCGATACAGGAGTCCTTGTTACCGCCTTCTGTTCACATTAGCAGAAGGAAAAAGGCTAAAGCTTCCAAAAAGTTTGGGACTAATGGAGTTGTTCAACAAAGTGTAGACAAAGAGGCTGTTCCATCTTTGAAATCCTCCAATGGAGATATCCAAACTTCACCCATCCATGTCAATGCATCGTCAGACACCGAGTCCAAGTTGAAAACTCGGTCAAGGTCATCGTCTCCTTATCCAAACACTGACTCCGTTTTCTATAACACTGATATATGGCAGTACCCAGATTTGAAACCACCATCTTCTCCCACTCCCTCAAAGCCAAGGAAATGA

Protein sequence

MESHSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNPSTKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGTNGVVQQSVDKEAVPSLKSSNGDIQTSPIHVNASSDTESKLKTRSRSSSPYPNTDSVFYNTDIWQYPDLKPPSSPTPSKPRK

Homology

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BLAST of Cp4.1LG12g10860 vs. Swiss-Prot
Match: STR4A_ARATH (Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thaliana GN=STR4A PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.9e-63
Identity = 135/244 (55.33%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 52  TPFQNPSNP-STKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALET-DQAS 111
           +P +N + P ST  +  P     K  P H L K++L   ++QL+++  P LA E+ D  S
Sbjct: 11  SPLRNLTKPCSTSQIPKPIQNSTKQPPIHLLTKTNLSVTISQLIITS-PVLASESFDSIS 70

Query: 112 SD----KINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFR 171
           SD    KI+LESILV+ID+FFN+YPFFVAGCTF +LV  P + +Y LRKYK ISA++AFR
Sbjct: 71  SDPSSGKIDLESILVTIDNFFNKYPFFVAGCTFTYLVVYPAVMFY-LRKYKPISAMNAFR 130

Query: 172 RIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGAD 231
           +++++ ++QLLDIRD K+LA L SPNL+ L K  VQV +SE D++GF+ KVK  F D  +
Sbjct: 131 KLKNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKGSFSDAEN 190

Query: 232 TRVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKK 290
           T V VLDNFDGNS KVAELL KNGFKEAY I+ G RG+ GWLAIQE LLPP VH+   K 
Sbjct: 191 TVVCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGWLAIQEELLPPPVHMYTAKN 250

[Close]

BLAST of Cp4.1LG12g10860 vs. Swiss-Prot
Match: STR4_ARATH (Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana GN=STR4 PE=1 SV=2)

HSP 1 Score: 119.8 bits (299), Expect = 6.5e-26
Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 1


Query: 102 ALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRK----YKF 161
           AL+    +S   + + ++  I +F    P  +AG   +  + +P +    L K    +  
Sbjct: 75  ALQQSMTTSSSFDSDGLIEGISNFVTDNPLVIAGG--VAALAVPFVLSQVLNKKPKSWGV 134

Query: 162 ISAIDAFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVK 221
            SA +A+ ++  D NAQLLDIR       +GSPN++ L K  V  VY+ ED+ GF+KK+ 
Sbjct: 135 ESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLS 194

Query: 222 NGFGDGADTRVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWL 268
             F D  +T +++LD FDGNS  VAEL+  NGFK AYAIKDG  G +GWL
Sbjct: 195 LKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL 242

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BLAST of Cp4.1LG12g10860 vs. TrEMBL
Match: A0A0A0K8H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368730 PE=4 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.6e-148
Identity = 294/383 (76.76%), Postives = 317/383 (82.77%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFL------HKLPSLKPISLSPSLIPF-NSKPLSVFNGAHLPTINKTP 60
           MESHSLYLSSSS  L      HKL S KPIS  PSLIPF NSKPL+VFNG    +IN+TP
Sbjct: 1   MESHSLYLSSSSPSLQSHRAIHKLSSQKPISPPPSLIPFANSKPLTVFNGPRFSSINRTP 60

Query: 61  FQNPSNPSTKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLL-SPLPSLALETDQASSDK 120
           F +P+ PS     NP FLFAKTSPF QL+K H PFALTQLLL +PLPS ALETD ASSDK
Sbjct: 61  FPSPTIPS-----NPPFLFAKTSPFLQLMKPHFPFALTQLLLLTPLPSFALETDLASSDK 120

Query: 121 INLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPN 180
           I+LESILVSID+FFNRYPFFVAGCTFIWLV IP IDYYF+RKYKFISAI+AFR+IRD+PN
Sbjct: 121 ISLESILVSIDEFFNRYPFFVAGCTFIWLVVIPSIDYYFIRKYKFISAINAFRKIRDEPN 180

Query: 181 AQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLD 240
           AQLLD+R+EKSLA LGSPNLRILNKDVV+VVYSEED+DGFVKKVK  FGD ADT VFVLD
Sbjct: 181 AQLLDVREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDDADTIVFVLD 240

Query: 241 NFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKF 300
           NFDGNSMK AELL KNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVH+ RRKK KAS K 
Sbjct: 241 NFDGNSMKAAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASPKL 300

Query: 301 GTNGVVQQSVDKEAVPSLKSSNGDIQTSPIHVNASSDTESKLKTRSRSSSPYPNTDSVFY 360
           GTNGVVQQ+ D EAVPSLKSSN +IQ S +HVNASS  ES+LKT+SR SSPYPN      
Sbjct: 301 GTNGVVQQNGDNEAVPSLKSSNREIQPSHVHVNASSPAESQLKTQSRPSSPYPN------ 360

Query: 361 NTDIWQYPDLKPPSSPTPSKPRK 376
                 YPDLKPPSSP PSKP K
Sbjct: 361 ------YPDLKPPSSPMPSKPGK 366

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BLAST of Cp4.1LG12g10860 vs. TrEMBL
Match: M5VJ90_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007412mg PE=4 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 1.6e-87
Identity = 209/384 (54.43%), Postives = 255/384 (66.41%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNP 60
           MES S+ LS S    + L + KP++  P  +P NS  +S+       +   T   N  + 
Sbjct: 1   MESLSMILSCSPPLQNHLKTQKPVTSGPISLPQNSTSISIVASQPFNSFPSTK-NNLQSQ 60

Query: 61  STKPLKNPHFLFAKTSPFHQ-LVKSHLPFALTQLLLSP---LPSLALETDQAS----SDK 120
           S+K ++NP  L  KTSPF Q L ++ L F LT+L+ +    LP  A E   +S    SD+
Sbjct: 61  SSKSVQNPS-LILKTSPFSQGLTRNRLYFLLTELITTTAFTLPGFASEAAVSSTEQVSDR 120

Query: 121 INLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPN 180
           INLE+ILVSIDDFFNR PFFVAGCTF+WLV IPL+  Y LRKYKF+  IDAFR++RDDPN
Sbjct: 121 INLEAILVSIDDFFNRNPFFVAGCTFVWLVVIPLVQEY-LRKYKFVLVIDAFRKLRDDPN 180

Query: 181 AQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLD 240
            QLLDIRDEKSL +L SPNL+ILNK  VQV +SE+D+DGFVKKV   FG+ ADT + VL 
Sbjct: 181 VQLLDIRDEKSLKYLKSPNLKILNKATVQVPFSEDDEDGFVKKVLERFGNPADTALCVLG 240

Query: 241 NFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKF 300
           NFDG S+KVAELLFKNGFKEAYAIK GV G KGWL  QE+LLPPS+HI  +KK + S+K 
Sbjct: 241 NFDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVETSQKT 300

Query: 301 GTN-GVVQQSVDKEAVPSLKS-SNGDIQ-TSPIHVNASSDTESKLKTRSRSSSPYPNTDS 360
           G N GVV+ + D     S  S S G+ Q T       S+D+ S +K   RSSSPYP+   
Sbjct: 301 GMNGGVVRGNEDSNGAASAGSFSIGESQRTDNGRTAKSTDSVSHVKNGFRSSSPYPS--- 360

Query: 361 VFYNTDIWQYPDLKPPSSPTPSKP 374
                    YPDLKPPSSPTPSKP
Sbjct: 361 ---------YPDLKPPSSPTPSKP 369

[Close]

BLAST of Cp4.1LG12g10860 vs. TrEMBL
Match: W9QZC5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007426 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 4.0e-83
Identity = 203/390 (52.05%), Postives = 247/390 (63.33%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFLHKLPSLKPISLSP-SLI--PFNSKPLSVFNGAHLPTINKTPFQNP 60
           MES +     S    + L + KP++  P SL+  P ++   S     H P+   T     
Sbjct: 39  MESLATLFFRSPPIKNHLKTQKPLTSKPFSLLHKPLSTSQTSNSRETHFPSSENTHILL- 98

Query: 61  SNPSTKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLL-----LSPLPSLALETDQAS--- 120
            NP++ PL+    L   +S F  L ++HL F L+ L+     L  LP  A E+  +S   
Sbjct: 99  RNPTSDPLQRHQILLKSSSFFQPLSETHLSFVLSGLITATTTLYSLPCSASESVVSSTEQ 158

Query: 121 -SDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIR 180
            SDKINLESILVSID FFNRYPFFVAGCTFIWL  IP+   YF RKYKFI AIDAFR++R
Sbjct: 159 VSDKINLESILVSIDGFFNRYPFFVAGCTFIWLFVIPVTQGYF-RKYKFIYAIDAFRKLR 218

Query: 181 DDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRV 240
           DDPN QLLDIR+EK L  L SPNL+ILNK  VQV +SE+D+DGFVKKV   F +   T V
Sbjct: 219 DDPNVQLLDIREEKILRSLKSPNLKILNKSAVQVPFSEDDEDGFVKKVLGNFKEPEYTVV 278

Query: 241 FVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKA 300
            +LDN DGNSMKVAELLFKNGFK AYAIK GV G+KGWL IQE+LLPPS+HI  +KK KA
Sbjct: 279 CILDNLDGNSMKVAELLFKNGFKAAYAIKGGVAGKKGWLEIQETLLPPSLHIYPQKKRKA 338

Query: 301 SKKFGTNG-VVQQSVDKEAVPSLKSSNGDIQTSPIHVNASSDTESKL--KTRSRSSSPYP 360
           S++ G NG V++ + D  A+   + S+        H   ++ T S L  K  +RSSSPYP
Sbjct: 339 SQELGENGRVIRSNEDNGAIGESQGSD--------HAQVANSTMSTLDKKNGARSSSPYP 398

Query: 361 NTDSVFYNTDIWQYPDLKPPSSPTPSKPRK 376
           N            YPDLKPPSSPTPSKP K
Sbjct: 399 N------------YPDLKPPSSPTPSKPSK 406

[Close]

BLAST of Cp4.1LG12g10860 vs. TrEMBL
Match: E0CW02_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00750 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 7.6e-82
Identity = 204/381 (53.54%), Postives = 248/381 (65.09%), Query Frame = 1


Query: 1   MESHSLY--LSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPS 60
           MES   Y  L  S  F +    LKPI+L P+ IP N KP +    AH P  +   F+  S
Sbjct: 1   MESLHSYRVLPPSKPFQNHPKILKPIALLPNSIPIN-KPTT----AHPPHNHLFIFKT-S 60

Query: 61  NPSTKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALETDQASSDKINLESI 120
           +PS  P  +P FL     P       HL   L+    +PLP  A ET  +++DKINLESI
Sbjct: 61  SPSPSP--SPAFL--SQFPLKPDKIPHLLLGLSSF--APLPCFASETVVSANDKINLESI 120

Query: 121 LVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNAQLLDI 180
           +VSIDDFFNR PFFVAG TFIWLV +PL   Y L+K+KFISAI+AFR++RDDPNAQLLDI
Sbjct: 121 VVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEY-LKKFKFISAINAFRKLRDDPNAQLLDI 180

Query: 181 RDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLDNFDGNS 240
           RD KSLA+LGSPNL+ILNK VVQV +S++D+D F+K V   F D  +T V VLDNFDGNS
Sbjct: 181 RDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFLKVVSTKFADPNNTTVCVLDNFDGNS 240

Query: 241 MKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFGTN-GV 300
           MKVAELLFKNGFKEAYAI+ G+RG+ GW AIQE+LLPPSVHI  +KK K S++   N G+
Sbjct: 241 MKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENLLPPSVHIYPKKKVKMSRQPEVNGGI 300

Query: 301 VQQSVDKEAVPSLKS----SNGDIQTSPIHVNASSDTESKLKTRSRSSSPYPNTDSVFYN 360
           + +  D     S  S    S+  +    +     S  ++KL   SRSSSPYPN       
Sbjct: 301 IIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKSTPQAKL--GSRSSSPYPN------- 354

Query: 361 TDIWQYPDLKPPSSPTPSKPR 375
                YPDLKPPSSPTP+KPR
Sbjct: 361 -----YPDLKPPSSPTPAKPR 354

[Close]

BLAST of Cp4.1LG12g10860 vs. TrEMBL
Match: G7KSH3_MEDTR (Rhodanese/cell cycle control phosphatase superfamily protein, putative OS=Medicago truncatula GN=MTR_7g080890 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.8e-81
Identity = 201/388 (51.80%), Postives = 255/388 (65.72%), Query Frame = 1


Query: 4   HSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNPSTK 63
           HSL + S SL L   P  K   L      F +KP S+ +       N  P  + S P   
Sbjct: 5   HSL-MDSLSLHLSYPPFPKTQKL------FTTKPFSLLS-------NPNPLHSSSFPQ-- 64

Query: 64  PLKNPHFLFAKTSPFHQLV-------KSHLPFALTQLLLSPLPSLALETD---QASSDKI 123
               PHF   K S  H  +       KS   F++  L  +P  SLA+E     ++ + +I
Sbjct: 65  ----PHFN-KKISISHSPIPLQNLFKKSTFSFSIINLF-TPFQSLAVEAPTLTESDAGRI 124

Query: 124 NLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNA 183
           NLESILVSIDDFFNRYPFFVAGC+FI+LV IPL + YF RKYKF+SAIDAFR++RD+ ++
Sbjct: 125 NLESILVSIDDFFNRYPFFVAGCSFIYLVAIPLAEEYF-RKYKFVSAIDAFRKLRDEADS 184

Query: 184 QLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLDN 243
           QLLDIRD K++ FLGSP+L+++NK+VVQ  + E ++DGFVKKV   F D ++T VFVLD+
Sbjct: 185 QLLDIRDRKNVKFLGSPSLKMVNKEVVQFEFVEGNEDGFVKKVLERFKDASNTAVFVLDS 244

Query: 244 FDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFG 303
           FDGNSMKVAELLFKNGFKEAYAIK GVRG++GW+AIQ++LLPPSVHI+RRKK K  K+  
Sbjct: 245 FDGNSMKVAELLFKNGFKEAYAIKGGVRGQQGWMAIQDTLLPPSVHINRRKKTKVPKELN 304

Query: 304 T--NGVVQQSVDKEAVPSLKSSN----GDIQTSPIHVNASSDTESKLKTRS-RSSSPYPN 363
           T  NG +QQS +K    SL SS+    G+ +T   HV  S ++  ++K  S  SSSPYPN
Sbjct: 305 TNGNGAIQQSDNKN--ESLVSSDTPAVGNQETENDHVKKSVESNPEMKISSVVSSSPYPN 355

Query: 364 TDSVFYNTDIWQYPDLKPPSSPTPSKPR 375
                       YPDLKPPSSP+PSKP+
Sbjct: 365 ------------YPDLKPPSSPSPSKPQ 355

[Close]

BLAST of Cp4.1LG12g10860 vs. TAIR10
Match: AT3G25480.1 (AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein)

HSP 1 Score: 243.4 bits (620), Expect = 2.2e-64
Identity = 135/244 (55.33%), Postives = 174/244 (71.31%), Query Frame = 1


Query: 52  TPFQNPSNP-STKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSPLPSLALET-DQAS 111
           +P +N + P ST  +  P     K  P H L K++L   ++QL+++  P LA E+ D  S
Sbjct: 11  SPLRNLTKPCSTSQIPKPIQNSTKQPPIHLLTKTNLSVTISQLIITS-PVLASESFDSIS 70

Query: 112 SD----KINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFR 171
           SD    KI+LESILV+ID+FFN+YPFFVAGCTF +LV  P + +Y LRKYK ISA++AFR
Sbjct: 71  SDPSSGKIDLESILVTIDNFFNKYPFFVAGCTFTYLVVYPAVMFY-LRKYKPISAMNAFR 130

Query: 172 RIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGAD 231
           +++++ ++QLLDIRD K+LA L SPNL+ L K  VQV +SE D++GF+ KVK  F D  +
Sbjct: 131 KLKNESDSQLLDIRDVKTLALLASPNLKFLGKSSVQVPFSENDEEGFLTKVKGSFSDAEN 190

Query: 232 TRVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKK 290
           T V VLDNFDGNS KVAELL KNGFKEAY I+ G RG+ GWLAIQE LLPP VH+   K 
Sbjct: 191 TVVCVLDNFDGNSSKVAELLIKNGFKEAYYIRGGARGKNGWLAIQEELLPPPVHMYTAKN 250

[Close]

BLAST of Cp4.1LG12g10860 vs. TAIR10
Match: AT4G01050.1 (AT4G01050.1 thylakoid rhodanese-like)

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-27
Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 1


Query: 102 ALETDQASSDKINLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRK----YKF 161
           AL+    +S   + + ++  I +F    P  +AG   +  + +P +    L K    +  
Sbjct: 75  ALQQSMTTSSSFDSDGLIEGISNFVTDNPLVIAGG--VAALAVPFVLSQVLNKKPKSWGV 134

Query: 162 ISAIDAFRRIRDDPNAQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVK 221
            SA +A+ ++  D NAQLLDIR       +GSPN++ L K  V  VY+ ED+ GF+KK+ 
Sbjct: 135 ESAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLS 194

Query: 222 NGFGDGADTRVFVLDNFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWL 268
             F D  +T +++LD FDGNS  VAEL+  NGFK AYAIKDG  G +GWL
Sbjct: 195 LKFKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWL 242

[Close]

BLAST of Cp4.1LG12g10860 vs. NCBI nr
Match: gi|659116494|ref|XP_008458097.1| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-150
Identity = 297/381 (77.95%), Postives = 317/381 (83.20%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFL------HKLPSLKPISLSPSLIPF-NSKPLSVFNGAHLPTINKTP 60
           MESHSLYLSSSS FL      HKL S KPIS  PSLIPF NSKPL+VFNG H  +IN+T 
Sbjct: 1   MESHSLYLSSSSPFLSSHRTIHKLSSEKPISRPPSLIPFANSKPLTVFNGPHFSSINRTS 60

Query: 61  FQNPSNPSTKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLL-SPLPSLALETDQASSDK 120
           F +P+ PS     NP FLFAKTSP  QL K H PFALTQLLL +PLPS ALETD ASSDK
Sbjct: 61  FPSPTIPS-----NPRFLFAKTSPILQLTKPHFPFALTQLLLLTPLPSFALETDLASSDK 120

Query: 121 INLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPN 180
           INLESILVSID+FFNRYPFFVAGCTFIWLV IPLIDYYF+RKYKFISAIDAFR+IRD+PN
Sbjct: 121 INLESILVSIDEFFNRYPFFVAGCTFIWLVVIPLIDYYFIRKYKFISAIDAFRKIRDEPN 180

Query: 181 AQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLD 240
           AQLLD+R+EKSLA LGSPNLRILNKDVV+VVYSEED+DGFVKKVK  FGD ADT VFVLD
Sbjct: 181 AQLLDVREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDCADTIVFVLD 240

Query: 241 NFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKF 300
           NFDGNSMKVAELL KNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVH+ RRKK KAS+K 
Sbjct: 241 NFDGNSMKVAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASQKL 300

Query: 301 GTNGVVQQSVDKEAVPSLKSSNGDIQTSPIHVNASSDTESKLKTRSRSSSPYPNTDSVFY 360
           GTNGVVQQ+ D E VPSLKSSN +IQ S +HVNASS  ES+LKT SR SSPYPN      
Sbjct: 301 GTNGVVQQNGDNETVPSLKSSNREIQPSQVHVNASSPAESQLKTWSRPSSPYPN------ 360

Query: 361 NTDIWQYPDLKPPSSPTPSKP 374
                 YPDLKPPSSPTPSKP
Sbjct: 361 ------YPDLKPPSSPTPSKP 364

[Close]

BLAST of Cp4.1LG12g10860 vs. NCBI nr
Match: gi|778727151|ref|XP_004149316.2| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis sativus])

HSP 1 Score: 533.9 bits (1374), Expect = 2.3e-148
Identity = 294/383 (76.76%), Postives = 317/383 (82.77%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFL------HKLPSLKPISLSPSLIPF-NSKPLSVFNGAHLPTINKTP 60
           MESHSLYLSSSS  L      HKL S KPIS  PSLIPF NSKPL+VFNG    +IN+TP
Sbjct: 1   MESHSLYLSSSSPSLQSHRAIHKLSSQKPISPPPSLIPFANSKPLTVFNGPRFSSINRTP 60

Query: 61  FQNPSNPSTKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLL-SPLPSLALETDQASSDK 120
           F +P+ PS     NP FLFAKTSPF QL+K H PFALTQLLL +PLPS ALETD ASSDK
Sbjct: 61  FPSPTIPS-----NPPFLFAKTSPFLQLMKPHFPFALTQLLLLTPLPSFALETDLASSDK 120

Query: 121 INLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPN 180
           I+LESILVSID+FFNRYPFFVAGCTFIWLV IP IDYYF+RKYKFISAI+AFR+IRD+PN
Sbjct: 121 ISLESILVSIDEFFNRYPFFVAGCTFIWLVVIPSIDYYFIRKYKFISAINAFRKIRDEPN 180

Query: 181 AQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLD 240
           AQLLD+R+EKSLA LGSPNLRILNKDVV+VVYSEED+DGFVKKVK  FGD ADT VFVLD
Sbjct: 181 AQLLDVREEKSLAVLGSPNLRILNKDVVRVVYSEEDEDGFVKKVKKSFGDDADTIVFVLD 240

Query: 241 NFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKF 300
           NFDGNSMK AELL KNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVH+ RRKK KAS K 
Sbjct: 241 NFDGNSMKAAELLVKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHMKRRKKGKASPKL 300

Query: 301 GTNGVVQQSVDKEAVPSLKSSNGDIQTSPIHVNASSDTESKLKTRSRSSSPYPNTDSVFY 360
           GTNGVVQQ+ D EAVPSLKSSN +IQ S +HVNASS  ES+LKT+SR SSPYPN      
Sbjct: 301 GTNGVVQQNGDNEAVPSLKSSNREIQPSHVHVNASSPAESQLKTQSRPSSPYPN------ 360

Query: 361 NTDIWQYPDLKPPSSPTPSKPRK 376
                 YPDLKPPSSP PSKP K
Sbjct: 361 ------YPDLKPPSSPMPSKPGK 366

[Close]

BLAST of Cp4.1LG12g10860 vs. NCBI nr
Match: gi|595792369|ref|XP_007199933.1| (hypothetical protein PRUPE_ppa007412mg [Prunus persica])

HSP 1 Score: 331.3 bits (848), Expect = 2.3e-87
Identity = 209/384 (54.43%), Postives = 255/384 (66.41%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNP 60
           MES S+ LS S    + L + KP++  P  +P NS  +S+       +   T   N  + 
Sbjct: 1   MESLSMILSCSPPLQNHLKTQKPVTSGPISLPQNSTSISIVASQPFNSFPSTK-NNLQSQ 60

Query: 61  STKPLKNPHFLFAKTSPFHQ-LVKSHLPFALTQLLLSP---LPSLALETDQAS----SDK 120
           S+K ++NP  L  KTSPF Q L ++ L F LT+L+ +    LP  A E   +S    SD+
Sbjct: 61  SSKSVQNPS-LILKTSPFSQGLTRNRLYFLLTELITTTAFTLPGFASEAAVSSTEQVSDR 120

Query: 121 INLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPN 180
           INLE+ILVSIDDFFNR PFFVAGCTF+WLV IPL+  Y LRKYKF+  IDAFR++RDDPN
Sbjct: 121 INLEAILVSIDDFFNRNPFFVAGCTFVWLVVIPLVQEY-LRKYKFVLVIDAFRKLRDDPN 180

Query: 181 AQLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLD 240
            QLLDIRDEKSL +L SPNL+ILNK  VQV +SE+D+DGFVKKV   FG+ ADT + VL 
Sbjct: 181 VQLLDIRDEKSLKYLKSPNLKILNKATVQVPFSEDDEDGFVKKVLERFGNPADTALCVLG 240

Query: 241 NFDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKF 300
           NFDG S+KVAELLFKNGFKEAYAIK GV G KGWL  QE+LLPPS+HI  +KK + S+K 
Sbjct: 241 NFDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVETSQKT 300

Query: 301 GTN-GVVQQSVDKEAVPSLKS-SNGDIQ-TSPIHVNASSDTESKLKTRSRSSSPYPNTDS 360
           G N GVV+ + D     S  S S G+ Q T       S+D+ S +K   RSSSPYP+   
Sbjct: 301 GMNGGVVRGNEDSNGAASAGSFSIGESQRTDNGRTAKSTDSVSHVKNGFRSSSPYPS--- 360

Query: 361 VFYNTDIWQYPDLKPPSSPTPSKP 374
                    YPDLKPPSSPTPSKP
Sbjct: 361 ---------YPDLKPPSSPTPSKP 369

[Close]

BLAST of Cp4.1LG12g10860 vs. NCBI nr
Match: gi|694429734|ref|XP_009342380.1| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 327.8 bits (839), Expect = 2.5e-86
Identity = 202/382 (52.88%), Postives = 256/382 (67.02%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNP 60
           MES S+ LS S    + L + KP +  P+ +P  +  +   + + LP  +++ F +  N 
Sbjct: 1   MESLSMILSFSPPPQNHLKAQKPSTSPPTSLP-QTTTIPAISTSLLPNSSQSQFPSTKNT 60

Query: 61  STKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSP---LPSLALETDQAS----SDKI 120
              P+    FL   T   H+L K+ L F LT+L+ +    LPS A E+  ++    SDKI
Sbjct: 61  PHTPI----FLLKPTHFPHRLPKTQLKFLLTELIATTPFALPSFASESAASAPEQVSDKI 120

Query: 121 NLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNA 180
           NLESILVSIDDFFNR PFFVAGCTF+WLV IPL+  Y LRKYKF+  IDAFR++RDDPNA
Sbjct: 121 NLESILVSIDDFFNRNPFFVAGCTFVWLVVIPLVQAY-LRKYKFVLVIDAFRKLRDDPNA 180

Query: 181 QLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLDN 240
           QLLDIRDEKSL +L SPNL+ILNK  VQV +SE+D+ GFVK+V   F + A+T + +L N
Sbjct: 181 QLLDIRDEKSLGYLKSPNLKILNKGTVQVPFSEDDEAGFVKRVLERFANPAETVLCILGN 240

Query: 241 FDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFG 300
           FDG S+KVAELLFKNGFKEAYAIK GV G KGWL  QE+LLPPS+HI  +KK K +++  
Sbjct: 241 FDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVKTTQETV 300

Query: 301 TNGVVQQSVDKE-AVPSLKSSNGDIQTSPI-HVNASSDTESKLKTRSRSSSPYPNTDSVF 360
           TNGVV++  D   AV S   S G+ QT+     N S+D+ S++K  SRSSSPY +     
Sbjct: 301 TNGVVREKEDSNGAVTSRNLSTGESQTTDNGRTNKSTDSASQMKNGSRSSSPYSS----- 360

Query: 361 YNTDIWQYPDLKPPSSPTPSKP 374
                  YPDLKPPSSPTPSKP
Sbjct: 361 -------YPDLKPPSSPTPSKP 364

[Close]

BLAST of Cp4.1LG12g10860 vs. NCBI nr
Match: gi|657981065|ref|XP_008382545.1| (PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Malus domestica])

HSP 1 Score: 323.9 bits (829), Expect = 3.6e-85
Identity = 205/382 (53.66%), Postives = 254/382 (66.49%), Query Frame = 1


Query: 1   MESHSLYLSSSSLFLHKLPSLKPISLSPSLIPFNSKPLSVFNGAHLPTINKTPFQNPSNP 60
           MES S+ LS S    + L + KP +  P+ +P  +   ++     LP  N +  Q PS  
Sbjct: 1   MESLSMILSFSPPPQNHLKAQKPSTSPPTSLPQTTTIPAI--STSLPP-NSSHAQFPSTK 60

Query: 61  STKPLKNPHFLFAKTSPFHQLVKSHLPFALTQLLLSP---LPSLALETDQAS----SDKI 120
           +T     P FL   T   H+L K+ L F LT+L+ +    LPS A E+  ++    SDKI
Sbjct: 61  NTP--HTPIFLLKPTHFPHRLPKTQLTFLLTELIATTPFALPSFASESAASAPEQVSDKI 120

Query: 121 NLESILVSIDDFFNRYPFFVAGCTFIWLVGIPLIDYYFLRKYKFISAIDAFRRIRDDPNA 180
           NLES+LVSIDDFFNR PFFVAGCTF+WLV IPL+  Y LRKYKF+  IDAFR++RDDPNA
Sbjct: 121 NLESVLVSIDDFFNRNPFFVAGCTFVWLVVIPLVQAY-LRKYKFVLVIDAFRKLRDDPNA 180

Query: 181 QLLDIRDEKSLAFLGSPNLRILNKDVVQVVYSEEDQDGFVKKVKNGFGDGADTRVFVLDN 240
           QLLDIRD+KSL +L SPNL+ILNK  VQV +SE+D+ GFVK+V   F + A+T + VL N
Sbjct: 181 QLLDIRDQKSLGYLKSPNLKILNKGTVQVPFSEDDEAGFVKRVLERFANPAETVLCVLGN 240

Query: 241 FDGNSMKVAELLFKNGFKEAYAIKDGVRGEKGWLAIQESLLPPSVHISRRKKAKASKKFG 300
           FDG S+KVAELLFKNGFKEAYAIK GV G KGWL  QE+LLPPS+HI  +KK K S++  
Sbjct: 241 FDGISIKVAELLFKNGFKEAYAIKGGVGGTKGWLESQETLLPPSMHIYPKKKVKTSQETV 300

Query: 301 TNGVVQQSVDKE-AVPSLKSSNGDIQTSPI-HVNASSDTESKLKTRSRSSSPYPNTDSVF 360
           TNGVV+   D   AV S   S G+ QT+       S+D+ S++K  SRSSSPYP+     
Sbjct: 301 TNGVVRGKEDSNGAVTSRNLSTGESQTTDNGRTTKSTDSASQMKNGSRSSSPYPS----- 360

Query: 361 YNTDIWQYPDLKPPSSPTPSKP 374
                  YPDLKPPSSPTPSKP
Sbjct: 361 -------YPDLKPPSSPTPSKP 364

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STR4A_ARATH	3.9e-63	55.33	Rhodanese-like domain-containing protein 4A, chloroplastic OS=Arabidopsis thalia...	[more]
STR4_ARATH	6.5e-26	39.41	Rhodanese-like domain-containing protein 4, chloroplastic OS=Arabidopsis thalian...	[more]

BLAST of Cp4.1LG12g10860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8H6_CUCSA	1.6e-148	76.76	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G368730 PE=4 SV=1	[more]
M5VJ90_PRUPE	1.6e-87	54.43	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007412mg PE=4 SV=1	[more]
W9QZC5_9ROSA	4.0e-83	52.05	Uncharacterized protein OS=Morus notabilis GN=L484_007426 PE=4 SV=1	[more]
E0CW02_VITVI	7.6e-82	53.54	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00750 PE=4 SV=...	[more]
G7KSH3_MEDTR	3.8e-81	51.80	Rhodanese/cell cycle control phosphatase superfamily protein, putative OS=Medica...	[more]

BLAST of Cp4.1LG12g10860 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25480.1	2.2e-64	55.33	Rhodanese/Cell cycle control phosphatase superfamily protein	[more]
AT4G01050.1	3.6e-27	39.41	thylakoid rhodanese-like	[more]

BLAST of Cp4.1LG12g10860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659116494\|ref\|XP_008458097.1\|	1.1e-150	77.95	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis m...	[more]
gi\|778727151\|ref\|XP_004149316.2\|	2.3e-148	76.76	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Cucumis s...	[more]
gi\|595792369\|ref\|XP_007199933.1\|	2.3e-87	54.43	hypothetical protein PRUPE_ppa007412mg [Prunus persica]	[more]
gi\|694429734\|ref\|XP_009342380.1\|	2.5e-86	52.88	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Pyrus x b...	[more]
gi\|657981065\|ref\|XP_008382545.1\|	3.6e-85	53.66	PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Malus dom...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001763	Rhodanese-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10860.1	Cp4.1LG12g10860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001763	Rhodanese-like domain	GENE3D	G3DSA:3.40.250.10		coord: 154..277 score: 2.1
IPR001763	Rhodanese-like domain	PROFILE	PS50206	RHODANESE_3	coord: 169..271 score: 8
IPR001763	Rhodanese-like domain	unknown	SSF52821	Rhodanese/Cell cycle control phosphatase	coord: 141..261 score: 1.98
None	No IPR available	PANTHER	PTHR11177	CHITINASE	coord: 159..275 score: 6.5
None	No IPR available	PANTHER	PTHR11177:SF167	RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC	coord: 159..275 score: 6.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g10860	Cucsa.387900	Cucumber (Gy14) v1	cgycpeB1027
Cp4.1LG12g10860	CmaCh17G013010	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g10860	CmoCh17G012730	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g10860	Cla014886	Watermelon (97103) v1	cpewmB135
Cp4.1LG12g10860	Csa7G368730	Cucumber (Chinese Long) v2	cpecuB157
Cp4.1LG12g10860	MELO3C021127	Melon (DHL92) v3.5.1	cpemeB119
Cp4.1LG12g10860	ClCG09G008340	Watermelon (Charleston Gray)	cpewcgB129
Cp4.1LG12g10860	CSPI07G14950	Wild cucumber (PI 183967)	cpecpiB159
Cp4.1LG12g10860	Lsi02G021500	Bottle gourd (USVL1VR-Ls)	cpelsiB111
Cp4.1LG12g10860	MELO3C021127.2	Melon (DHL92) v3.6.1	cpemedB146
Cp4.1LG12g10860	CsaV3_7G026740	Cucumber (Chinese Long) v3	cpecucB0182
Cp4.1LG12g10860	Bhi09G001033	Wax gourd	cpewgoB0209
Cp4.1LG12g10860	CsGy7G013460	Cucumber (Gy14) v2	cgybcpeB900
Cp4.1LG12g10860	Carg11482	Silver-seed gourd	carcpeB0018

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g10860	Cucurbita pepo (Zucchini)	cpecpeB153
Cp4.1LG12g10860	Cucurbita pepo (Zucchini)	cpecpeB160
Cp4.1LG12g10860	Cucurbita maxima (Rimu)	cmacpeB896
Cp4.1LG12g10860	Cucurbita moschata (Rifu)	cmocpeB834
Cp4.1LG12g10860	Silver-seed gourd	carcpeB0116