Lsi02G016180 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G016180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Early nodulin-like protein 1
Location	chr02 : 22047984 .. 22048703 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCACAACGTGCAATCAGCCATGGATGAACAAAATCAACCACCCACTATTCCTCTCAACTCCCATTTACGCCACTATAAATTTCTCCTCCAATTAACCTTCACTTCCATTATTCAATTCAATTCAATTCCTTCTGTGGAAACTACCATCATTATTAATGGCTTCCAACTCCTTCTTCACTCTCCTTCTTCTCGCCACCTCCCTCTCCGCCGTCGCTTCTTTTGAGTTCCAAGTCGGTGGCGTCAAAGGCTGGGTGGTTCCGCCGGTTAACGACAGCAAAATCTACAACGATTGGGCCTCAGAAAACAGATTCAGAGCCGGCGATACCGTCCGTAAGTTCTGATCATCTCAACAACACCTATCGATTAAACTTCCCCTTCCACATTCACATTGTCTCTGTTTGTTTGTTGCTTTTGGATTAGGTTTCCGGTACAAGAAGGACTCGGTGATGGAAGTGACAGAAGAAGAGTACAAAAGATGCAACTCTACACAGCCGAGTTTCTTCTCCAACACCGGCAACACGGTCTTCCAATTCGGCCGATCGGGAACTTTCTACTTCATCAGCGGTGCTAATGGCCACTGCGAGAGAGGGCAGAGGATGATCGTGAAGGTGATGGCCGAAGATGAATCTTCTGAGAAATCCTCCGCCGTGAGGGCTCCAATTTCGCCGCTAGGGTTTCTAAAATTCGTCTCTGCTCCGTTGGCTCTGTCCATTCTGTTT

mRNA sequence

GCCACAACGTGCAATCAGCCATGGATGAACAAAATCAACCACCCACTATTCCTCTCAACTCCCATTTACGCCACTATAAATTTCTCCTCCAATTAACCTTCACTTCCATTATTCAATTCAATTCAATTCCTTCTGTGGAAACTACCATCATTATTAATGGCTTCCAACTCCTTCTTCACTCTCCTTCTTCTCGCCACCTCCCTCTCCGCCTCGGTGGCGTCAAAGGCTGGGTGGTTCCGCCGGTTAACGACAGCAAAATCTACAACGATTGGGCCTCAGAAAACAGATTCAGAGCCGGCGATACCGTCCGTTTCCGGTACAAGAAGGACTCGGTGATGGAAGTGACAGAAGAAGAGTACAAAAGATGCAACTCTACACAGCCGAGTTTCTTCTCCAACACCGGCAACACGGTCTTCCAATTCGGCCGATCGGGAACTTTCTACTTCATCAGCGGTGCTAATGGCCACTGCGAGAGAGGGCAGAGGATGATCGTGAAGGTGATGGCCGAAGATGAATCTTCTGAGAAATCCTCCGCCGTGAGGGCTCCAATTTCGCCGCTAGGGTTTCTAAAATTCGTCTCTGCTCCGTTGGCTCTGTCCATTCTGTTT

Coding sequence (CDS)

ATGGATGAACAAAATCAACCACCCACTATTCCTCTCAACTCCCATTTACGCCACTATAAATTTCTCCTCCAATTAACCTTCACTTCCATTATTCAATTCAATTCAATTCCTTCTGTGGAAACTACCATCATTATTAATGGCTTCCAACTCCTTCTTCACTCTCCTTCTTCTCGCCACCTCCCTCTCCGCCTCGGTGGCGTCAAAGGCTGGGTGGTTCCGCCGGTTAACGACAGCAAAATCTACAACGATTGGGCCTCAGAAAACAGATTCAGAGCCGGCGATACCGTCCGTTTCCGGTACAAGAAGGACTCGGTGATGGAAGTGACAGAAGAAGAGTACAAAAGATGCAACTCTACACAGCCGAGTTTCTTCTCCAACACCGGCAACACGGTCTTCCAATTCGGCCGATCGGGAACTTTCTACTTCATCAGCGGTGCTAATGGCCACTGCGAGAGAGGGCAGAGGATGATCGTGAAGGTGATGGCCGAAGATGAATCTTCTGAGAAATCCTCCGCCGTGAGGGCTCCAATTTCGCCGCTAGGGTTTCTAAAATTCGTCTCTGCTCCGTTGGCTCTGTCCATTCTGTTT

Protein sequence

MDEQNQPPTIPLNSHLRHYKFLLQLTFTSIIQFNSIPSVETTIIINGFQLLLHSPSSRHLPLRLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPSFFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPLGFLKFVSAPLALSILF

Homology

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BLAST of Lsi02G016180 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 8.1e-20
Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1


Query: 64  LGGVKG-WVVPPVNDSKIYNDWASENRFRAGDTVRFRYK--KDSVMEVTEEEYKRCNSTQ 123
           +GG  G W +PP + S  + +WA + RF+ GD + FRY+  KDSV+EVT+E Y  CN+T 
Sbjct: 33  VGGKSGDWKIPP-SSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTN 92

Query: 124 PSFFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPL 183
           P      G T  +  RSG FYFISGANGHCE+GQ++ + V+     S + S +    SP+
Sbjct: 93  PLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI-----SPRHSVISPAPSPV 148

[Close]

BLAST of Lsi02G016180 vs. Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.6e-14
Identity = 38/100 (38.00%), Postives = 63/100 (63.00%), Query Frame = 1


Query: 65  GGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRY--KKDSVMEVTEEEYKRCNSTQPS 124
           G    W +P  + S+  N WA   RFR GDT+ ++Y  +KDSV++VT++ Y  CN+T P+
Sbjct: 30  GKTSSWKIPS-SPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYINCNTTNPA 89

Query: 125 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMA 163
              + G+T  +  RSG ++FISG+  +C  G+++ + VM+
Sbjct: 90  ANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVVMS 128

[Close]

BLAST of Lsi02G016180 vs. Swiss-Prot
Match: ENL1_ORYSJ (Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=ENODL1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.3e-13
Identity = 41/104 (39.42%), Postives = 60/104 (57.69%), Query Frame = 1


Query: 65  GGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKD---SVMEVTEEEYKRCNSTQP 124
           GG  GWVV P      +N WA  NRF+  DT+ F +  +   SV++VTE ++  C++  P
Sbjct: 34  GGRDGWVVDPAES---FNYWAERNRFQVNDTIVFLHDDEVGGSVLQVTEGDFDTCSTGNP 93

Query: 125 SFFSN---TGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMA 163
                    G +VF+F RSG F+FISG    C++GQ++ + VMA
Sbjct: 94  VQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYIIVMA 134

[Close]

BLAST of Lsi02G016180 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.6e-13
Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRY--KKDSVMEVTEEEYKRCNSTQ 122
           ++G   GW      D   Y  WAS N+F  GD++ F Y  K  +V++V +E++K CNS+ 
Sbjct: 5   KVGDSTGWTTLVPYD---YAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSS 64

Query: 123 PSFFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKV 161
           P+    +G       R GTFYF+ G  GHC+ GQ++ +KV
Sbjct: 65  PAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101

[Close]

BLAST of Lsi02G016180 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.2e-12
Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = 1


Query: 64  LGGVKGWVV-PPVNDSKIYNDWASENRFRAGDTVRFRYKK--DSVMEVTEEEYKRCNSTQ 123
           +GG   WV  PP N    Y  W+ +NRF   DT+ F Y K  DSV+EV + +Y  CN+  
Sbjct: 33  VGGSGAWVTNPPEN----YESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKN 92

Query: 124 PSFFSNTGNTVFQFGRSGTFYFISGANGHCERGQRM-IVKVMAEDESSEKSSAVRAP 177
           P    + G++     R G FYFISG   +C++GQ++ +V + A   S+ +S    AP
Sbjct: 93  PIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAP 145

[Close]

BLAST of Lsi02G016180 vs. TrEMBL
Match: A0A0A0KUB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517780 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.6e-60
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++GG+KGWVVPP NDSKIYNDWASENRF+A D VRFRYKKDSVMEVT++EYKRCNSTQPS
Sbjct: 25  QVGGLKGWVVPPANDSKIYNDWASENRFKADDAVRFRYKKDSVMEVTKDEYKRCNSTQPS 84

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPLGF 182
           FFSNTGNTVFQF RSGTFYFISGANGHCE+GQRMIVKVMA+DESSEKSSAVR P S LGF
Sbjct: 85  FFSNTGNTVFQFSRSGTFYFISGANGHCEKGQRMIVKVMADDESSEKSSAVRTPTSWLGF 144

Query: 183 LKFVSAPLALSILF 197
           +K VSA LALSILF
Sbjct: 145 MKLVSASLALSILF 158

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BLAST of Lsi02G016180 vs. TrEMBL
Match: A0A059AHX7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02271 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.3e-42
Identity = 86/143 (60.14%), Postives = 108/143 (75.52%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++GG +GWVVPP NDSK+YNDWASENRFR GDT+RF+YKKDSVMEVTE EYK CNST+PS
Sbjct: 18  QVGGAEGWVVPPANDSKVYNDWASENRFRPGDTLRFKYKKDSVMEVTEAEYKNCNSTRPS 77

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDE-----------SSEKSS 182
           FFSNTGNTV+    SG FYFISG +GHC++GQRMIVKV++ +E           SS  S+
Sbjct: 78  FFSNTGNTVYALDHSGPFYFISGVSGHCQKGQRMIVKVLSSEESEASGGSRGSSSSASSA 137

Query: 183 AVRAPISPLGFLKFVSAPLALSI 195
           +  A  S +GFL ++ + +  S+
Sbjct: 138 SYAAGFSKIGFLLYLLSYITSSL 160

[Close]

BLAST of Lsi02G016180 vs. TrEMBL
Match: A0A067E373_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038631mg PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.2e-42
Identity = 91/163 (55.83%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 38  SVETTIIINGFQLLLHSPSSRHLPL-----RLGGVKGWVVPPVNDSKIYNDWASENRFRA 97
           SV  T+++    L +   S  HLP+     ++GG +GWVVPP NDSKIYNDWASENRF+ 
Sbjct: 12  SVNLTLLL----LAIIISSIHHLPVHSLEFQVGGNRGWVVPPANDSKIYNDWASENRFQV 71

Query: 98  GDTVRFRYKKDSVMEVTEEEYKRCNSTQPSFFSNTGNTVFQFGRSGTFYFISGANGHCER 157
           GDT+RF+YKKDSVMEVT++EYK+CNST P FFSNTGNT F+    G FYFISGA+GHCE+
Sbjct: 72  GDTIRFKYKKDSVMEVTDKEYKKCNSTHPIFFSNTGNTAFRLDHPGPFYFISGASGHCEK 131

Query: 158 GQRMIVKVMAEDESSEKSS---AVRAPISPLGFLKFVSAPLAL 193
           GQRMI+KVM  +ESS  +      ++  SP   L    + LA+
Sbjct: 132 GQRMIIKVMYHEESSPSTGDDHGHKSSASPAAVLALAVSKLAI 170

[Close]

BLAST of Lsi02G016180 vs. TrEMBL
Match: V4TJ30_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017887mg PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.2e-42
Identity = 91/163 (55.83%), Postives = 115/163 (70.55%), Query Frame = 1


Query: 38  SVETTIIINGFQLLLHSPSSRHLPL-----RLGGVKGWVVPPVNDSKIYNDWASENRFRA 97
           SV  T+++    L +   S  HLP+     ++GG +GWVVPP NDSKIYNDWASENRF+ 
Sbjct: 12  SVNLTLLL----LAIIISSIHHLPVHSLEFQVGGNRGWVVPPANDSKIYNDWASENRFQV 71

Query: 98  GDTVRFRYKKDSVMEVTEEEYKRCNSTQPSFFSNTGNTVFQFGRSGTFYFISGANGHCER 157
           GDT+RF+YKKDSVMEVT++EYK+CNST P FFSNTGNT F+    G FYFISGA+GHCE+
Sbjct: 72  GDTIRFKYKKDSVMEVTDKEYKKCNSTHPIFFSNTGNTAFRLDHPGPFYFISGASGHCEK 131

Query: 158 GQRMIVKVMAEDESSEKSS---AVRAPISPLGFLKFVSAPLAL 193
           GQRMI+KVM  +ESS  +      ++  SP   L    + LA+
Sbjct: 132 GQRMIIKVMYHEESSPSTGDDHGHKSSASPAAVLALAVSKLAI 170

[Close]

BLAST of Lsi02G016180 vs. TrEMBL
Match: M5XG59_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022055mg PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.5e-41
Identity = 82/118 (69.49%), Postives = 101/118 (85.59%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++GG K WVVPP NDSKIYNDWAS NRF+ GDT+RF+YKK+SVMEVTEEE+K+CNST+P+
Sbjct: 33  QVGGTKDWVVPPTNDSKIYNDWASGNRFQVGDTIRFKYKKNSVMEVTEEEFKKCNSTRPN 92

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDE---SSEKSSAVRAPI 178
           FFSNTGNTV+ F  +G+FYFISGA+GHC+RGQRMIVKVM+ +E   S  +SS  RA +
Sbjct: 93  FFSNTGNTVYLFDHAGSFYFISGASGHCQRGQRMIVKVMSLEESPSSDRRSSGSRAAV 150

[Close]

BLAST of Lsi02G016180 vs. TAIR10
Match: AT1G48940.1 (AT1G48940.1 early nodulin-like protein 6)

HSP 1 Score: 137.9 bits (346), Expect = 6.8e-33
Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 1


Query: 65  GGVKGWVVPPV-NDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPSF 124
           GG  GW++P   N S I+N WAS+NRF+ GDT+RF+YKKDSV+ VTE+EYK+C +T+P  
Sbjct: 29  GGENGWIIPQSSNQSDIFNQWASKNRFKVGDTIRFKYKKDSVLVVTEDEYKKCQTTKPEL 88

Query: 125 FSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKS 171
           +SN  +TVF+  R G FYFISG +GHCE+GQ+MI+KVM E ES+ +S
Sbjct: 89  YSNHDDTVFKLDRPGLFYFISGVSGHCEQGQKMIIKVM-EVESTPQS 134

[Close]

BLAST of Lsi02G016180 vs. TAIR10
Match: AT5G14345.1 (AT5G14345.1 early nodulin-like protein 21)

HSP 1 Score: 137.5 bits (345), Expect = 8.8e-33
Identity = 58/102 (56.86%), Postives = 80/102 (78.43%), Query Frame = 1


Query: 70  WVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPSFFSNTGN 129
           WVVPP N S+ +NDWAS  RF+ GD ++F+YKKDSVM+VT+E YK+CNS+ P F+SNTG 
Sbjct: 24  WVVPPANSSESFNDWASNKRFQVGDIIQFKYKKDSVMQVTKESYKQCNSSHPRFYSNTGK 83

Query: 130 TVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSS 172
           T F F  S  +YFISG +GHCE+GQ+MIV+V++ D ++  ++
Sbjct: 84  TRFMFDHSVPYYFISGTSGHCEKGQKMIVEVISRDHTTTSAA 125

[Close]

BLAST of Lsi02G016180 vs. TAIR10
Match: AT3G18590.1 (AT3G18590.1 early nodulin-like protein 5)

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-31
Identity = 59/106 (55.66%), Postives = 79/106 (74.53%), Query Frame = 1


Query: 64  LGGVKGWVVPPVND-SKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 123
           +GG  GW+VP        +N WAS+NRF+ GDT+RF+Y KDSV+ V+EEEYK+C +T+P 
Sbjct: 29  VGGENGWIVPKSKTLGDAFNQWASDNRFKVGDTLRFKYTKDSVLVVSEEEYKKCKATKPQ 88

Query: 124 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSE 169
            +SN  +TVF+  R G FYFISG +GHCE+GQ+MIVKVM  + S+E
Sbjct: 89  LYSNNEDTVFKLDRPGLFYFISGVSGHCEKGQKMIVKVMETESSTE 134

[Close]

BLAST of Lsi02G016180 vs. TAIR10
Match: AT1G79800.1 (AT1G79800.1 early nodulin-like protein 7)

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++G   GW VP  NDS +Y+ WAS NRF  GD++ F Y KDSVMEV +  +  CN + P 
Sbjct: 35  KVGDEFGWRVPLQNDSAVYSHWASSNRFHIGDSLSFVYDKDSVMEVDKWGFYHCNGSDPI 94

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPL 181
              + GN+ F   R G FYFISG+N HC  GQR+IV+VM   +  +  +++   +SPL
Sbjct: 95  TAFDNGNSTFDLDRPGLFYFISGSNQHCTSGQRLIVEVMHIHQHHDHDASMPPSMSPL 152

[Close]

BLAST of Lsi02G016180 vs. TAIR10
Match: AT2G25060.1 (AT2G25060.1 early nodulin-like protein 14)

HSP 1 Score: 98.6 bits (244), Expect = 4.5e-21
Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1


Query: 64  LGGVKG-WVVPPVNDSKIYNDWASENRFRAGDTVRFRYK--KDSVMEVTEEEYKRCNSTQ 123
           +GG  G W +PP + S  + +WA + RF+ GD + FRY+  KDSV+EVT+E Y  CN+T 
Sbjct: 33  VGGKSGDWKIPP-SSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAYNSCNTTN 92

Query: 124 PSFFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPL 183
           P      G T  +  RSG FYFISGANGHCE+GQ++ + V+     S + S +    SP+
Sbjct: 93  PLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI-----SPRHSVISPAPSPV 148

[Close]

BLAST of Lsi02G016180 vs. NCBI nr
Match: gi|700196154|gb|KGN51331.1| (hypothetical protein Csa_5G517780 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 8.0e-60
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++GG+KGWVVPP NDSKIYNDWASENRF+A D VRFRYKKDSVMEVT++EYKRCNSTQPS
Sbjct: 25  QVGGLKGWVVPPANDSKIYNDWASENRFKADDAVRFRYKKDSVMEVTKDEYKRCNSTQPS 84

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPLGF 182
           FFSNTGNTVFQF RSGTFYFISGANGHCE+GQRMIVKVMA+DESSEKSSAVR P S LGF
Sbjct: 85  FFSNTGNTVFQFSRSGTFYFISGANGHCEKGQRMIVKVMADDESSEKSSAVRTPTSWLGF 144

Query: 183 LKFVSAPLALSILF 197
           +K VSA LALSILF
Sbjct: 145 MKLVSASLALSILF 158

[Close]

BLAST of Lsi02G016180 vs. NCBI nr
Match: gi|778708582|ref|XP_004142840.2| (PREDICTED: early nodulin-like protein 1 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 8.0e-60
Identity = 116/134 (86.57%), Postives = 125/134 (93.28%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++GG+KGWVVPP NDSKIYNDWASENRF+A D VRFRYKKDSVMEVT++EYKRCNSTQPS
Sbjct: 30  QVGGLKGWVVPPANDSKIYNDWASENRFKADDAVRFRYKKDSVMEVTKDEYKRCNSTQPS 89

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSSAVRAPISPLGF 182
           FFSNTGNTVFQF RSGTFYFISGANGHCE+GQRMIVKVMA+DESSEKSSAVR P S LGF
Sbjct: 90  FFSNTGNTVFQFSRSGTFYFISGANGHCEKGQRMIVKVMADDESSEKSSAVRTPTSWLGF 149

Query: 183 LKFVSAPLALSILF 197
           +K VSA LALSILF
Sbjct: 150 MKLVSASLALSILF 163

[Close]

BLAST of Lsi02G016180 vs. NCBI nr
Match: gi|659117915|ref|XP_008458853.1| (PREDICTED: early nodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 6.7e-59
Identity = 117/136 (86.03%), Postives = 126/136 (92.65%), Query Frame = 1


Query: 63  RLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKRCNSTQPS 122
           ++GG+KGWVVPP NDSKIYNDWASENRF+AGDTVRFRYKKDSVMEVT EEYKRCNSTQPS
Sbjct: 25  QVGGLKGWVVPPANDSKIYNDWASENRFKAGDTVRFRYKKDSVMEVTNEEYKRCNSTQPS 84

Query: 123 FFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDES--SEKSSAVRAPISPL 182
           FFSNTGNTVFQF RSGTFYFISGA+GHCE+GQRMIVKVMA+DES  SEKSSAVR PIS L
Sbjct: 85  FFSNTGNTVFQFNRSGTFYFISGASGHCEKGQRMIVKVMADDESSDSEKSSAVRTPISWL 144

Query: 183 GFLKFVSAPLALSILF 197
           G +KFVSA LAL I+F
Sbjct: 145 GIMKFVSASLALYIVF 160

[Close]

BLAST of Lsi02G016180 vs. NCBI nr
Match: gi|694389383|ref|XP_009370321.1| (PREDICTED: mavicyanin-like [Pyrus x bretschneideri])

HSP 1 Score: 184.9 bits (468), Expect = 1.4e-43
Identity = 91/143 (63.64%), Postives = 106/143 (74.13%), Query Frame = 1


Query: 56  SSRHLPLRLGGVKGWVVPPVNDSKIYNDWASENRFRAGDTVRFRYKKDSVMEVTEEEYKR 115
           S+     ++GG K WVVPP ND+KIYNDWASENRF+ GDT+RF YKKDSVMEVTE EYK+
Sbjct: 25  SASAFEFQVGGNKDWVVPPANDTKIYNDWASENRFQVGDTIRFHYKKDSVMEVTEAEYKK 84

Query: 116 CNSTQPSFFSNTGNTVFQFGRSGTFYFISGANGHCERGQRMIVKVMAEDESSEKSS---- 175
           CNST+PSFFSNTGNTV+ F  SG+FYFISGA GHCERGQRMIVKVMA +E    S     
Sbjct: 85  CNSTRPSFFSNTGNTVYTFNHSGSFYFISGAAGHCERGQRMIVKVMAAEEEDSPSGGDAK 144

Query: 176 -AVRAPISPLGFLKFVSAPLALS 194
            +  A +S +G  K V A   +S
Sbjct: 145 RSSGAAVSSVGVFKHVLARFVMS 167

[Close]

BLAST of Lsi02G016180 vs. NCBI nr
Match: gi|1009124290|ref|XP_015878987.1| (PREDICTED: stellacyanin-like [Ziziphus jujuba])

HSP 1 Score: 183.3 bits (464), Expect = 4.0e-43
Identity = 95/174 (54.60%), Postives = 120/174 (68.97%), Query Frame = 1


Query: 32  QFNSIPSVETTIIINGFQLLLHSPSSRHLPLRLGGVKGWVVPPVNDSKIYNDWASENRFR 91
           Q+ S+ +    +++    L L S S+     ++GG +GWVVPP ND+KIYNDWASENRF+
Sbjct: 4   QYYSMKNRAVVLLLILVLLYLQSFSAFSFEFQVGGAQGWVVPPANDTKIYNDWASENRFQ 63

Query: 92  AGDTVRFRYKKDSVMEVTEEEYKRCNSTQPSFFSNTGNTVFQFGRSGTFYFISGANGHCE 151
            GDT+RFRYKKDSVMEV E +YK+CNST P FFSNTGNTVF+F  SG FYFISG +GHC+
Sbjct: 64  PGDTIRFRYKKDSVMEVREADYKKCNSTHPIFFSNTGNTVFRFNHSGLFYFISGVSGHCD 123

Query: 152 RGQRMIVKVMAEDESS-----EKSSAVRAPISPLGFLKFVSAPLAL----SILF 197
           +GQR+I+KVMA +ESS     + S +  A    LG  K V    AL    S+LF
Sbjct: 124 KGQRVIIKVMASEESSSSPGGKSSGSPAAAALSLGVSKLVFVQFALCYAASVLF 177

The following BLAST results are available for this feature:

BLAST of Lsi02G016180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ENL1_ARATH	8.1e-20	44.26	Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2	[more]
ENL3_ARATH	6.6e-14	38.00	Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2	[more]
ENL1_ORYSJ	4.3e-13	39.42	Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=ENODL1 PE=1 SV=1	[more]
MAVI_CUCPE	5.6e-13	38.00	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]
ENL2_ARATH	1.2e-12	37.61	Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1	[more]

BLAST of Lsi02G016180 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUB3_CUCSA	5.6e-60	86.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517780 PE=4 SV=1	[more]
A0A059AHX7_EUCGR	2.3e-42	60.14	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02271 PE=4 SV=1	[more]
A0A067E373_CITSI	5.2e-42	55.83	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038631mg PE=4 SV=1	[more]
V4TJ30_9ROSI	5.2e-42	55.83	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017887mg PE=4 SV=1	[more]
M5XG59_PRUPE	1.5e-41	69.49	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022055mg PE=4 SV=1	[more]

BLAST of Lsi02G016180 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48940.1	6.8e-33	58.88	early nodulin-like protein 6	[more]
AT5G14345.1	8.8e-33	56.86	early nodulin-like protein 21	[more]
AT3G18590.1	2.2e-31	55.66	early nodulin-like protein 5	[more]
AT1G79800.1	2.6e-24	44.92	early nodulin-like protein 7	[more]
AT2G25060.1	4.5e-21	44.26	early nodulin-like protein 14	[more]

BLAST of Lsi02G016180 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700196154\|gb\|KGN51331.1\|	8.0e-60	86.57	hypothetical protein Csa_5G517780 [Cucumis sativus]	[more]
gi\|778708582\|ref\|XP_004142840.2\|	8.0e-60	86.57	PREDICTED: early nodulin-like protein 1 [Cucumis sativus]	[more]
gi\|659117915\|ref\|XP_008458853.1\|	6.7e-59	86.03	PREDICTED: early nodulin-like protein 1 [Cucumis melo]	[more]
gi\|694389383\|ref\|XP_009370321.1\|	1.4e-43	63.64	PREDICTED: mavicyanin-like [Pyrus x bretschneideri]	[more]
gi\|1009124290\|ref\|XP_015878987.1\|	4.0e-43	54.60	PREDICTED: stellacyanin-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0008150	biological_process
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G016180.1	Lsi02G016180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 98..160 score: 2.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 78..154 score: 8.9
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 60..162 score: 36
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 64..164 score: 1.4
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 63..161 score: 6.09
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 28..172 score: 1.4
None	No IPR available	PANTHER	PTHR33021:SF49	EARLY NODULIN-LIKE PROTEIN 21	coord: 28..172 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G016180	Csa5G517780	Cucumber (Chinese Long) v2	culsiB347
Lsi02G016180	CSPI05G17920	Wild cucumber (PI 183967)	cpilsiB351
Lsi02G016180	Cucsa.010990	Cucumber (Gy14) v1	cgylsiB318
Lsi02G016180	CmaCh04G026600	Cucurbita maxima (Rimu)	cmalsiB651
Lsi02G016180	CmoCh04G027870	Cucurbita moschata (Rifu)	cmolsiB640
Lsi02G016180	Cla004646	Watermelon (97103) v1	lsiwmB170
Lsi02G016180	MELO3C021611	Melon (DHL92) v3.5.1	lsimeB162
Lsi02G016180	ClCG09G019550	Watermelon (Charleston Gray)	lsiwcgB155
Lsi02G016180	MELO3C021611.2	Melon (DHL92) v3.6.1	lsimedB171
Lsi02G016180	Cla97C09G181000	Watermelon (97103) v2	lsiwmbB208
Lsi02G016180	Bhi06G000510	Wax gourd	lsiwgoB207
Lsi02G016180	Cp4.1LG01g23710	Cucurbita pepo (Zucchini)	cpelsiB336
Lsi02G016180	CsGy5G017590	Cucumber (Gy14) v2	cgyblsiB318
Lsi02G016180	Carg04484	Silver-seed gourd	carlsiB623
Lsi02G016180	CsaV3_5G026830	Cucumber (Chinese Long) v3	cuclsiB370

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G016180	Cucurbita maxima (Rimu)	cmalsiB272
Lsi02G016180	Cucurbita moschata (Rifu)	cmolsiB261
Lsi02G016180	Cucurbita pepo (Zucchini)	cpelsiB141
Lsi02G016180	Silver-seed gourd	carlsiB232