Csa5G517780 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCAGTTCCTTCCTTACTCTCTTCCTTTTCACCACCTCCCTCTCCACAGTCGTTTCTTTTGAATTCCAAGTGGGTGGCCTTAAAGGCTGGGTAGTTCCTCCAGCTAATGACAGTAAAATCTACAATGATTGGGCCTCCGAAAACAGATTCAAAGCTGATGATGCCGTCCGTAAGTAGCGTTCATCTTAAAAATAAATTGATTTCCGTTTCTTCTCATTGGCATTGTGTCTGTGTTTTGTTTTTGAAACAAGGTTTCCGGTACAAGAAGGATTCTGTGATGGAGGTGACGAAAGACGAGTACAAAAGATGTAACTCCACGCAGCCGAGCTTCTTTTCCAACACTGGAAATACCGTCTTCCAATTCAGCCGATCGGGAACTTTTTACTTCATCAGTGGCGCTAATGGACATTGTGAGAAAGGGCAGAGGATGATCGTGAAGGTGATGGCGGATGATGAATCCTCCGAGAAATCATCAGCTGTGAGGACTCCAACTTCTTGGCTTGGGTTTATGAAATTGGTCTCTGCTTCGTTGGCTCTGTCCATTCTGTTTTAG ATGGCTTTCAGTTCCTTCCTTACTCTCTTCCTTTTCACCACCTCCCTCTCCACAGTCGTTTCTTTTGAATTCCAAGTGGGTGGCCTTAAAGGCTGGGTAGTTCCTCCAGCTAATGACAGTAAAATCTACAATGATTGGGCCTCCGAAAACAGATTCAAAGCTGATGATGCCGTCCGTTTCCGGTACAAGAAGGATTCTGTGATGGAGGTGACGAAAGACGAGTACAAAAGATGTAACTCCACGCAGCCGAGCTTCTTTTCCAACACTGGAAATACCGTCTTCCAATTCAGCCGATCGGGAACTTTTTACTTCATCAGTGGCGCTAATGGACATTGTGAGAAAGGGCAGAGGATGATCGTGAAGGTGATGGCGGATGATGAATCCTCCGAGAAATCATCAGCTGTGAGGACTCCAACTTCTTGGCTTGGGTTTATGAAATTGGTCTCTGCTTCGTTGGCTCTGTCCATTCTGTTTTAG ATGGCTTTCAGTTCCTTCCTTACTCTCTTCCTTTTCACCACCTCCCTCTCCACAGTCGTTTCTTTTGAATTCCAAGTGGGTGGCCTTAAAGGCTGGGTAGTTCCTCCAGCTAATGACAGTAAAATCTACAATGATTGGGCCTCCGAAAACAGATTCAAAGCTGATGATGCCGTCCGTTTCCGGTACAAGAAGGATTCTGTGATGGAGGTGACGAAAGACGAGTACAAAAGATGTAACTCCACGCAGCCGAGCTTCTTTTCCAACACTGGAAATACCGTCTTCCAATTCAGCCGATCGGGAACTTTTTACTTCATCAGTGGCGCTAATGGACATTGTGAGAAAGGGCAGAGGATGATCGTGAAGGTGATGGCGGATGATGAATCCTCCGAGAAATCATCAGCTGTGAGGACTCCAACTTCTTGGCTTGGGTTTATGAAATTGGTCTCTGCTTCGTTGGCTCTGTCCATTCTGTTTTAG MAFSSFLTLFLFTTSLSTVVSFEFQVGGLKGWVVPPANDSKIYNDWASENRFKADDAVRFRYKKDSVMEVTKDEYKRCNSTQPSFFSNTGNTVFQFSRSGTFYFISGANGHCEKGQRMIVKVMADDESSEKSSAVRTPTSWLGFMKLVSASLALSILF*
BLAST of Csa5G517780 vs. Swiss-Prot
Match: ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060 PE=1 SV=2) HSP 1 Score: 105.1 bits (261), Expect = 7.0e-22 Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of Csa5G517780 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 4.4e-16 Identity = 53/144 (36.81%), Postives = 75/144 (52.08%), Query Frame = 1
BLAST of Csa5G517780 vs. Swiss-Prot
Match: ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090 PE=1 SV=2) HSP 1 Score: 85.5 bits (210), Expect = 5.7e-16 Identity = 46/124 (37.10%), Postives = 74/124 (59.68%), Query Frame = 1
BLAST of Csa5G517780 vs. Swiss-Prot
Match: ENL1_ORYSJ (Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=ENODL1 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.8e-15 Identity = 44/125 (35.20%), Postives = 67/125 (53.60%), Query Frame = 1
BLAST of Csa5G517780 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 1
BLAST of Csa5G517780 vs. TrEMBL
Match: A0A0A0KUB3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G517780 PE=4 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 3.4e-84 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa5G517780 vs. TrEMBL
Match: A0A059AHX7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02271 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.0e-44 Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = 1
BLAST of Csa5G517780 vs. TrEMBL
Match: B9SLS7_RICCO (Mavicyanin, putative OS=Ricinus communis GN=RCOM_0530970 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 7.7e-44 Identity = 85/127 (66.93%), Postives = 105/127 (82.68%), Query Frame = 1
BLAST of Csa5G517780 vs. TrEMBL
Match: V4TJ30_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017887mg PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43 Identity = 89/128 (69.53%), Postives = 100/128 (78.12%), Query Frame = 1
BLAST of Csa5G517780 vs. TrEMBL
Match: A0A067E373_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038631mg PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 1.0e-43 Identity = 89/128 (69.53%), Postives = 100/128 (78.12%), Query Frame = 1
BLAST of Csa5G517780 vs. TAIR10
Match: AT1G48940.1 (AT1G48940.1 early nodulin-like protein 6) HSP 1 Score: 145.2 bits (365), Expect = 3.4e-35 Identity = 74/167 (44.31%), Postives = 106/167 (63.47%), Query Frame = 1
BLAST of Csa5G517780 vs. TAIR10
Match: AT5G14345.1 (AT5G14345.1 early nodulin-like protein 21) HSP 1 Score: 144.4 bits (363), Expect = 5.9e-35 Identity = 66/128 (51.56%), Postives = 91/128 (71.09%), Query Frame = 1
BLAST of Csa5G517780 vs. TAIR10
Match: AT3G18590.1 (AT3G18590.1 early nodulin-like protein 5) HSP 1 Score: 140.6 bits (353), Expect = 8.5e-34 Identity = 66/126 (52.38%), Postives = 89/126 (70.63%), Query Frame = 1
BLAST of Csa5G517780 vs. TAIR10
Match: AT1G79800.1 (AT1G79800.1 early nodulin-like protein 7) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24 Identity = 54/113 (47.79%), Postives = 67/113 (59.29%), Query Frame = 1
BLAST of Csa5G517780 vs. TAIR10
Match: AT2G25060.1 (AT2G25060.1 early nodulin-like protein 14) HSP 1 Score: 105.1 bits (261), Expect = 3.9e-23 Identity = 57/126 (45.24%), Postives = 77/126 (61.11%), Query Frame = 1
BLAST of Csa5G517780 vs. NCBI nr
Match: gi|700196154|gb|KGN51331.1| (hypothetical protein Csa_5G517780 [Cucumis sativus]) HSP 1 Score: 318.9 bits (816), Expect = 4.9e-84 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa5G517780 vs. NCBI nr
Match: gi|778708582|ref|XP_004142840.2| (PREDICTED: early nodulin-like protein 1 [Cucumis sativus]) HSP 1 Score: 318.9 bits (816), Expect = 4.9e-84 Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1
BLAST of Csa5G517780 vs. NCBI nr
Match: gi|659117915|ref|XP_008458853.1| (PREDICTED: early nodulin-like protein 1 [Cucumis melo]) HSP 1 Score: 279.6 bits (714), Expect = 3.3e-72 Identity = 140/160 (87.50%), Postives = 145/160 (90.62%), Query Frame = 1
BLAST of Csa5G517780 vs. NCBI nr
Match: gi|1009124290|ref|XP_015878987.1| (PREDICTED: stellacyanin-like [Ziziphus jujuba]) HSP 1 Score: 191.0 bits (484), Expect = 1.5e-45 Identity = 97/161 (60.25%), Postives = 115/161 (71.43%), Query Frame = 1
BLAST of Csa5G517780 vs. NCBI nr
Match: gi|702486846|ref|XP_010034648.1| (PREDICTED: mavicyanin [Eucalyptus grandis]) HSP 1 Score: 189.5 bits (480), Expect = 4.5e-45 Identity = 90/148 (60.81%), Postives = 112/148 (75.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|