Lsi02G010280 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010280
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SBP (S-ribonuclease binding protein) family protein
Location	chr02 : 10803025 .. 10804467 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTCTTTCTAAATTCATTGACTTTATTTCTCTCTCCTAAAATCCCCAAAACAAACTCAATGGATTTGAATTAAAACCCCCAATCTTCTCCCTTCCTTGTCGCCACCTCTATTTCATGCTCTTTATTTTATTTTATTTATATTTCTCTCTTTCTCTCTATTAAGCAAGAAATTGTTGAGAAGATATCTCTAAGTCACAAGAAAAGCAAAGAAGAACCAAACCAACCCAACAAGAAAATTTTCATGGCAGTTGAAGCACGGCGTATGAATCTTCTACCTTCCCAGTTCATCATCCCCAACAACAGGTACATCCCTTAATCGATCTCTTCCTTTTTCAATTCTTTCCTATGAGACTTTGTTTTTTTTTTCTTTTTTCTCAAATGGGCTCTGTTTTATTTCCTCAGAGATTTCATCAAACAGAATCAAGGAATTGTTGATATCTGCAATCAGAATAAAACAAACACCCAGATGATACCGGCAACGGAGACGCCCGGATTATGGCCTTACGCGGCGGTGAAAGCGGTGCTTCCGCCGGAGACTGTGAATAACTTTGCGATGTACGATTGGGGAAAAGCAGAGAGTGGACTGACTTCGAATAACTTCTCGACCGCTCCGACGCGAAAGCGAACGAGACGATCGGTTTATGATGAACCGGGCGGTTCATTCCCACGGAGGTTGTTGGATGAAGAAATCATCAACTCCCACATTCAGCAGCAACAGAGTGAAATCGATCGGTTCATTGCAATTCATGTAAATCCCTGGTGATTTTACCTGTTGATTGGTTTTTGAATTAAACGATGTGATGAAGTTAACATTGGTTTGTTTTGTTTTGTTTTTGGAAAATTACAGAGGGAGAAGATGAGGATGGAAATGGAAGTACGGAAGAAGAGGGAATCAGGGATGTTGGTAAGGGCAATAGAGGAAAGAGTAGTGAAGAAGTTGAAGGAAAAAGAAGAAGAAATAGAAAGAATGGGGAAATTGAATTGGGTATTGCAAGAGAGAGTGAAACGGCTGTGTATGGAGAATCAGGTGTGGAGGGATTTAGCAGAGAGCAATGAAGCCACCGTGAATTCGTTAAGGAACAATTTGGAGCAGGTGATTTTGGCGGCTAATAACGTTGTTGCGGCGGAGGAGGCAGAGTCTAGCTGTGGAAGTACGACGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGAGTAGTGGCGGAGGAGAGCGGTGCCGGAAGTGTGGGGCGGGGGAATCGAGGGTGTTGGTGTTGCCATGCAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACACTTCACACTTGCCCTGTATGTAACTCTACCATTAATGCCAGCGTCCATGTTAATTTTTCTTAGAATTCTCATACCCAATTTACACAAACAAACAAACACAATTCTTTTCTTTTTTAGTAGAAAGAATTATTCTCTCTTTTAA

mRNA sequence

TTTATTTCTTTCTAAATTCATTGACTTTATTTCTCTCTCCTAAAATCCCCAAAACAAACTCAATGGATTTGAATTAAAACCCCCAATCTTCTCCCTTCCTTGTCGCCACCTCTATTTCATGCTCTTTATTTTATTTTATTTATATTTCTCTCTTTCTCTCTATTAAGCAAGAAATTGTTGAGAAGATATCTCTAAGTCACAAGAAAAGCAAAGAAGAACCAAACCAACCCAACAAGAAAATTTTCATGGCAGTTGAAGCACGGCGTATGAATCTTCTACCTTCCCAGTTCATCATCCCCAACAACAGAGATTTCATCAAACAGAATCAAGGAATTGTTGATATCTGCAATCAGAATAAAACAAACACCCAGATGATACCGGCAACGGAGACGCCCGGATTATGGCCTTACGCGGCGGTGAAAGCGGTGCTTCCGCCGGAGACTGTGAATAACTTTGCGATGTACGATTGGGGAAAAGCAGAGAGTGGACTGACTTCGAATAACTTCTCGACCGCTCCGACGCGAAAGCGAACGAGACGATCGGTTTATGATGAACCGGGCGGTTCATTCCCACGGAGGTTGTTGGATGAAGAAATCATCAACTCCCACATTCAGCAGCAACAGAGTGAAATCGATCGGTTCATTGCAATTCATAGGGAGAAGATGAGGATGGAAATGGAAGTACGGAAGAAGAGGGAATCAGGGATGTTGGTAAGGGCAATAGAGGAAAGAGTAGTGAAGAAGTTGAAGGAAAAAGAAGAAGAAATAGAAAGAATGGGGAAATTGAATTGGGTATTGCAAGAGAGAGTGAAACGGCTGTGTATGGAGAATCAGGTGTGGAGGGATTTAGCAGAGAGCAATGAAGCCACCGTGAATTCGTTAAGGAACAATTTGGAGCAGGTGATTTTGGCGGCTAATAACGTTGTTGCGGCGGAGGAGGCAGAGTCTAGCTGTGGAAGTACGACGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGAGTAGTGGCGGAGGAGAGCGGTGCCGGAAGTGTGGGGCGGGGGAATCGAGGGTGTTGGTGTTGCCATGCAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACACTTCACACTTGCCCTGTATGTAACTCTACCATTAATGCCAGCGTCCATGTTAATTTTTCTTAGAATTCTCATACCCAATTTACACAAACAAACAAACACAATTCTTTTCTTTTTTAGTAGAAAGAATTATTCTCTCTTTTAA

Coding sequence (CDS)

ATGGCAGTTGAAGCACGGCGTATGAATCTTCTACCTTCCCAGTTCATCATCCCCAACAACAGAGATTTCATCAAACAGAATCAAGGAATTGTTGATATCTGCAATCAGAATAAAACAAACACCCAGATGATACCGGCAACGGAGACGCCCGGATTATGGCCTTACGCGGCGGTGAAAGCGGTGCTTCCGCCGGAGACTGTGAATAACTTTGCGATGTACGATTGGGGAAAAGCAGAGAGTGGACTGACTTCGAATAACTTCTCGACCGCTCCGACGCGAAAGCGAACGAGACGATCGGTTTATGATGAACCGGGCGGTTCATTCCCACGGAGGTTGTTGGATGAAGAAATCATCAACTCCCACATTCAGCAGCAACAGAGTGAAATCGATCGGTTCATTGCAATTCATAGGGAGAAGATGAGGATGGAAATGGAAGTACGGAAGAAGAGGGAATCAGGGATGTTGGTAAGGGCAATAGAGGAAAGAGTAGTGAAGAAGTTGAAGGAAAAAGAAGAAGAAATAGAAAGAATGGGGAAATTGAATTGGGTATTGCAAGAGAGAGTGAAACGGCTGTGTATGGAGAATCAGGTGTGGAGGGATTTAGCAGAGAGCAATGAAGCCACCGTGAATTCGTTAAGGAACAATTTGGAGCAGGTGATTTTGGCGGCTAATAACGTTGTTGCGGCGGAGGAGGCAGAGTCTAGCTGTGGAAGTACGACGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGAGTAGTGGCGGAGGAGAGCGGTGCCGGAAGTGTGGGGCGGGGGAATCGAGGGTGTTGGTGTTGCCATGCAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACACTTCACACTTGCCCTGTATGTAACTCTACCATTAATGCCAGCGTCCATGTTAATTTTTCTTAG

Protein sequence

MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAAVKAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFPRRLLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANNVVAAEEAESSCGSTTAAAEEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVNFS

Homology

[Close]

BLAST of Lsi02G010280 vs. Swiss-Prot
Match: BRG1_ARATH (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana GN=BRG1 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 3.1e-50
Identity = 143/326 (43.87%), Postives = 192/326 (58.90%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAAVKA 60
           MAVEAR MNL  SQ+I   NR+ +K           N  N Q I     P       ++ 
Sbjct: 1   MAVEARHMNLFSSQYI--TNRECVKSQT--------NMNNGQQIAGGGFPVTIGDRNLQY 60

Query: 61  VLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPG----------GSFPR 120
           + P   +N+F      K+ES LT+ +       KR R S +D                P 
Sbjct: 61  IDP---INSF-----NKSESELTAIS-------KRQRDSTFDSDALIASQKRRAIAFSPA 120

Query: 121 RLLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEK 180
            L+D E++ S IQQQ SEIDRF+A   E +R+E+E R++ ++ ML  A++  ++KKLK K
Sbjct: 121 SLIDAELV-SQIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAK 180

Query: 181 EEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANNVVA-- 240
           +EEI RMGKLNWVLQERVK L +ENQ+WRDLA++NEAT N+LR+NLEQV+   +++ A  
Sbjct: 181 DEEIIRMGKLNWVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDDLDAFR 240

Query: 241 ------AEEAESSCGSTTAAAEEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCTM 300
                 A++AESSCGS        +     +GG   C++CG   + VLVLPCRHLCLCT+
Sbjct: 241 RPLVEEADDAESSCGSCDGG----DVTAVVNGG---CKRCGELTASVLVLPCRHLCLCTV 293

Query: 301 CGST--LHTCPVCNSTINASVHVNFS 307
           CGS+  L TCPVC+  + ASVHVN S
Sbjct: 301 CGSSALLRTCPVCDMVMTASVHVNMS 293

[Close]

BLAST of Lsi02G010280 vs. Swiss-Prot
Match: BOI_ARATH (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana GN=BOI PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.7e-48
Identity = 143/326 (43.87%), Postives = 192/326 (58.90%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAAVK- 60
           MAV+A  MN+  SQFI PN RD +K  +      N N    +      T G  P    + 
Sbjct: 1   MAVQAHHMNIF-SQFISPN-RDCVKFQE------NMNHGEFEF-----TGGEVPLITGES 60

Query: 61  -AVLPPETVNNFAMYDWGKAESGLTSNNFSTAP-TRKRTRRSVYDEPGGSFPRR------ 120
            AV P     NF      KAESGL S NF+  P + KR R   + +      RR      
Sbjct: 61  FAVEPLAAKANF-----NKAESGL-SYNFTVPPLSTKRQRDFQFSDSNAPVKRRSVAFDS 120

Query: 121 ----LLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKL 180
               L++ E+++    QQQSEIDRF+A   EK+R+E+E R++ ++ ML  A++  + KKL
Sbjct: 121 SSPSLINVELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKL 180

Query: 181 KEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVI-----LA 240
           KEK++EI R+  LNWVLQERVK L +ENQ+WRD+A++NEA  N+LR NL+QV+       
Sbjct: 181 KEKDDEIVRIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFP 240

Query: 241 ANNVVAAEEAESSCGSTTAAAEEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCTM 300
             + V  ++AESSCGS     +   E   + GGG  C++CG  E+ VLVLPCRHLCLCT+
Sbjct: 241 TASAVVEDDAESSCGS--CCGDGGGEAVTAVGGG--CKRCGEREASVLVLPCRHLCLCTV 300

Query: 301 CGST--LHTCPVCNSTINASVHVNFS 307
           CG +  L TCPVC+  +NASVHVN S
Sbjct: 301 CGGSALLRTCPVCDMVMNASVHVNMS 303

[Close]

BLAST of Lsi02G010280 vs. Swiss-Prot
Match: BRG2_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana GN=BRG2 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.5e-44
Identity = 136/362 (37.57%), Postives = 192/362 (53.04%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVD----ICNQNKTNTQMIPATETPGLWPYA 60
           MAV+A  + L P Q    +NR+    N  +       CN N+T   ++     P    + 
Sbjct: 1   MAVDAHHLFLSPPQLF--SNRELTMNNNTMEPTSGGFCNNNQTGYGVVSPFSVPN---HT 60

Query: 61  AVKAVLPPETVNNFAMYDWGKAESGLTSNN-------FSTAPTRKRTR---RSVYDEPGG 120
           +      P  ++ +   D     +G  ++        F   PTRKR+R   RS Y     
Sbjct: 61  STTTTATPPLLHVYGGSDTIPTTAGYYADGATNLDCEFFPLPTRKRSRDSSRSNYHHLLL 120

Query: 121 SFPRR-----------------LLDEEI-INSHIQQQQSEIDRFIAIH---REKMRMEME 180
             PR                   L ++I I+SH+ QQQ EIDRF+++H    E+++ E+E
Sbjct: 121 QNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEIDRFVSLHLYQMERVKYEIE 180

Query: 181 VRKKRESGMLVRAIEERVVKKLKEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESN 240
            ++KR++  ++ AIE+ +VK+L+ KEEE ER+GK+N  L+ERVK L +ENQ+WRDLA++N
Sbjct: 181 EKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQIWRDLAQTN 240

Query: 241 EATVNSLRNNLEQVILAA----------NNVVAAEEAESSCGSTTAAAEEEEE------E 300
           EAT N LR NLE V+              N+   ++AES CGS+     EE        E
Sbjct: 241 EATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCGSSCGGGGEETVRRRVGLE 300

Query: 301 EESSGGGER-----CRKCGAGESRVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVN 307
            E+    ER     CR CG  ES VL+LPCRHLCLC +CGS++HTCP+C S  NASVHVN
Sbjct: 301 REAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVN 357

[Close]

BLAST of Lsi02G010280 vs. Swiss-Prot
Match: BRG3_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana GN=BRG3 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 6.9e-42
Identity = 96/205 (46.83%), Postives = 141/205 (68.78%), Query Frame = 1


Query: 118 INSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEEEIERM 177
           ++S++QQ   +IDR I+ H E+MRME+E ++K +   +V A+E+ ++K L+ K++EI  +
Sbjct: 130 LSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHI 189

Query: 178 GKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN------VVAAEE 237
           GKLN  L+E+VK LC+ENQ+WRD+A+SNEATVN+LR+NL+QV+ A            A++
Sbjct: 190 GKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADD 249

Query: 238 AESSCGSTTAAAEEEE------EEEESSG----GGERCRKCGAGESRVLVLPCRHLCLCT 297
           A+S CGS      EEE      E +++      G   CR CG GE+ VL+LPCRH+CLC+
Sbjct: 250 AQSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCS 309

Query: 298 MCGSTLHTCPVCNSTINASVHVNFS 307
           +CGS+L+TCP+C S   AS+HVN S
Sbjct: 310 VCGSSLNTCPICKSPKTASLHVNLS 334

[Close]

BLAST of Lsi02G010280 vs. TrEMBL
Match: A0A0A0M3V5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707120 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119
Identity = 257/325 (79.08%), Postives = 271/325 (83.38%), Query Frame = 1


Query: 1   MAVEARRMNLLPS-QFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATET--PGL-WPYA 60
           MAVEAR MNLLPS QFIIPN+RDFIKQNQ +         NT M P T+T  PG+ WPY 
Sbjct: 1   MAVEARPMNLLPSHQFIIPNDRDFIKQNQELA--------NTHMTPVTDTTTPGIIWPYT 60

Query: 61  AVK-AVLPPETVNNFA-MYDWGKAESGLTSNNF-STAPTRKRTR-RSVYDEPGGSFPRRL 120
           AVK AV P  T+NNFA +YDWGKAESGLTSNNF STAPTRKRTR RS YDEPGG    RL
Sbjct: 61  AVKPAVTPETTLNNFATVYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEPGG----RL 120

Query: 121 LDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEE 180
           LDEEIINSHIQQQQSE+DRFIAIHREKMR+EME+RKKRESGMLVRAIEERVVKKLKEKEE
Sbjct: 121 LDEEIINSHIQQQQSEMDRFIAIHREKMRIEMEMRKKRESGMLVRAIEERVVKKLKEKEE 180

Query: 181 EIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN-----VV 240
           EIERMGKLNWVLQERVKRLC+ENQVWRDLAESNEATVN LRNNLEQVIL A N     V 
Sbjct: 181 EIERMGKLNWVLQERVKRLCVENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVA 240

Query: 241 AA----EEAESSCGSTTAAA--EEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCT 300
            A    E+AESSCGST+     EEEEEE ES GGG RCRKCGAGESRVLVLPCRHLCLCT
Sbjct: 241 GAKEKEEKAESSCGSTSECGRKEEEEEEAESGGGGGRCRKCGAGESRVLVLPCRHLCLCT 300

Query: 301 MCGSTLHTCPVCNSTINASVHVNFS 307
           MCGST+H+CPVCNS INASVHVNFS
Sbjct: 301 MCGSTIHSCPVCNSAINASVHVNFS 313

[Close]

BLAST of Lsi02G010280 vs. TrEMBL
Match: M5WG53_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008499mg PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.2e-63
Identity = 166/340 (48.82%), Postives = 216/340 (63.53%), Query Frame = 1


Query: 1   MAVEARRMN---LLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWP-YA 60
           MAVEA+ ++   L+PSQ I   NRDFIK NQG  +I +    +  ++ AT    L P Y 
Sbjct: 1   MAVEAQHLHHAALIPSQLI--PNRDFIKTNQGNANIYSTQMDSGLILSATMPENLLPMYQ 60

Query: 61  AVKAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFPRR----- 120
           +        ++N        +AESGLT NN S AP ++   + + D    S P++     
Sbjct: 61  SPFCEANKASMNK-------QAESGLTYNNIS-APRKRPRDQLINDFNNFSVPQKTKMSV 120

Query: 121 ----LLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKL 180
                +D++I    IQQQQSEIDRFIA H EK+RME+E ++K++S +LV AI+ER+VKKL
Sbjct: 121 GASSFIDQDIA-FQIQQQQSEIDRFIAQHTEKVRMELEEQRKQQSRLLVSAIQERIVKKL 180

Query: 181 KEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN-- 240
           KEK+EEI+RMGKLNWVLQERVK L +ENQ+WRD+A++NEA  NSLR NLEQV+   +   
Sbjct: 181 KEKDEEIQRMGKLNWVLQERVKSLFVENQIWRDMAQTNEAAANSLRTNLEQVLAHVSEEH 240

Query: 241 --------VVAAEEAESSCGSTTAAAEEEEEE----------EESSGGGER-CRKCGAGE 300
                      A++A+SSCGS     +EE  +              GGG+R C++CG  E
Sbjct: 241 QAGGGPPAAAVADDAQSSCGSNDYGRDEEAVDGGDAVVGGGGNGGCGGGDRMCKRCGVRE 300

Query: 301 SRVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVNFS 307
           SRVL+LPCRHLCLCTMCGSTL  CPVCNS +NASVHVNFS
Sbjct: 301 SRVLLLPCRHLCLCTMCGSTLLNCPVCNSVMNASVHVNFS 329

[Close]

BLAST of Lsi02G010280 vs. TrEMBL
Match: A0A0B2PFD3_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_023630 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60
Identity = 161/339 (47.49%), Postives = 202/339 (59.59%), Query Frame = 1


Query: 1   MAVEA--RRMNLLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAAV 60
           MAVEA    MNL PSQ +    R+ +K N G           T+   A  TP L      
Sbjct: 1   MAVEAPPHNMNLFPSQLLTA--REMMKPNLGFY-----TAQQTEAAAAAATPLL------ 60

Query: 61  KAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGG------------ 120
                     + A+    +++SGLT +  +TAPTRKR+R S+   P              
Sbjct: 61  ---------QSTALPFLHQSDSGLTCHVTTTAPTRKRSRDSITTVPNALLPLPQKNKLSS 120

Query: 121 ----SFPRRLLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEER 180
               S P  +LD+E++  H Q QQSEIDRFI  H EK+RMEM  ++ R+S ML+ AI+E 
Sbjct: 121 SSSSSPPPSILDQELL-FHFQNQQSEIDRFIVQHTEKVRMEMAEQRVRQSRMLITAIQEA 180

Query: 181 VVKKLKEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILA 240
           V KKLKEK+EEI+R+GKLNWVLQERVK +C+ENQ+W++LA++NEAT N+LRNNLEQV+  
Sbjct: 181 VAKKLKEKDEEIQRVGKLNWVLQERVKSICVENQIWKELAQTNEATANNLRNNLEQVLAH 240

Query: 241 A------NNVVAAEEAESSCGSTTAAAEEEEEEEESSGGGER---------CRKCGAGES 300
                  +N  A E AESSC S         EEEE  GG ER         C +CG  ES
Sbjct: 241 VSEDHHNHNHHAVEAAESSCASNNNNNHPHREEEEVCGGYERNDGVLGKRMCNQCGVRES 300

Query: 301 RVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVNFS 307
            VL+LPCRHLCLCTMCGST+H CP+C S INASVHVN+S
Sbjct: 301 IVLLLPCRHLCLCTMCGSTVHNCPLCQSGINASVHVNYS 316

[Close]

BLAST of Lsi02G010280 vs. TrEMBL
Match: A0A061GDM4_THECC (SBP family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_029357 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.0e-60
Identity = 171/338 (50.59%), Postives = 211/338 (62.43%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICN-QNKTNTQMIPAT-ETPGLWPYAAV 60
           MAVEAR MNL P Q I   N DFIK NQG  +I N Q  +   ++ A  E   L+P    
Sbjct: 1   MAVEARHMNLFPPQLI--TNSDFIKTNQGSGNIYNTQMDSCVPLVDAMQEASQLFPLYQS 60

Query: 61  KAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFP--------- 120
               P     +       KA+SGLT N   +AP RKR R S +     S+P         
Sbjct: 61  LVCDPTSAKTSI-----NKADSGLTYNIPVSAP-RKRPRDS-FINGFDSYPVSQKNKISG 120

Query: 121 -RRLLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLK 180
              +LD++I+ S IQQQQ EIDRFIA H EK+R+E+E R+KR+S ML+ AI+E V+KKLK
Sbjct: 121 VSSVLDDDIL-SQIQQQQQEIDRFIAEHTEKVRLELEERRKRQSRMLITAIQEGVMKKLK 180

Query: 181 EKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVI-------- 240
           EK+EEI+RMGKLNWVLQERVK L +ENQ+WRDLA++NEAT NSLR NLEQV+        
Sbjct: 181 EKDEEIQRMGKLNWVLQERVKSLYVENQLWRDLAQTNEATANSLRTNLEQVLAHVSEERH 240

Query: 241 LAANNVVAAEEAESSCGSTTAA-AEEEEEEEESSGGG----------ERCRKCGAGESRV 300
           ++      A++AESSCGS+     +    + +  GGG           +CRKCG  ES V
Sbjct: 241 VSGGAAALADDAESSCGSSDEGWRKVVPPQPQGRGGGLQDKAVVGHNRKCRKCGEKESSV 300

Query: 301 LVLPCRHLCLCTMCGSTL-HTCPVCNSTINASVHVNFS 307
           L+LPCRHLCLCTMCGSTL  TCPVC+S  NASVHVN S
Sbjct: 301 LLLPCRHLCLCTMCGSTLVGTCPVCDSVTNASVHVNMS 328

[Close]

BLAST of Lsi02G010280 vs. TrEMBL
Match: A0A061GKA6_THECC (SBP family protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_029357 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.3e-60
Identity = 170/336 (50.60%), Postives = 212/336 (63.10%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICN-QNKTNTQMIPAT-ETPGLWPYAAV 60
           MAVEAR MNL P Q +I N+ DFIK NQG  +I N Q  +   ++ A  E   L+P    
Sbjct: 1   MAVEARHMNLFPPQ-LITNSSDFIKTNQGSGNIYNTQMDSCVPLVDAMQEASQLFPLYQS 60

Query: 61  KAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFP--------- 120
               P     +       KA+SGLT N   +AP RKR R S +     S+P         
Sbjct: 61  LVCDPTSAKTSI-----NKADSGLTYNIPVSAP-RKRPRDS-FINGFDSYPVSQKNKISG 120

Query: 121 -RRLLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLK 180
              +LD++I+ S IQQQQ EIDRFIA H EK+R+E+E R+KR+S ML+ AI+E V+KKLK
Sbjct: 121 VSSVLDDDIL-SQIQQQQQEIDRFIAEHTEKVRLELEERRKRQSRMLITAIQEGVMKKLK 180

Query: 181 EKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVI-------- 240
           EK+EEI+RMGKLNWVLQERVK L +ENQ+WRDLA++NEAT NSLR NLEQV+        
Sbjct: 181 EKDEEIQRMGKLNWVLQERVKSLYVENQLWRDLAQTNEATANSLRTNLEQVLAHVSEERH 240

Query: 241 LAANNVVAAEEAESSCGSTTAA-AEEEEEEEESSGGG----------ERCRKCGAGESRV 300
           ++      A++AESSCGS+     +    + +  GGG           +CRKCG  ES V
Sbjct: 241 VSGGAAALADDAESSCGSSDEGWRKVVPPQPQGRGGGLQDKAVVGHNRKCRKCGEKESSV 300

Query: 301 LVLPCRHLCLCTMCGSTL-HTCPVCNSTINASVHVN 305
           L+LPCRHLCLCTMCGSTL  TCPVC+S  NASVHVN
Sbjct: 301 LLLPCRHLCLCTMCGSTLVGTCPVCDSVTNASVHVN 327

[Close]

BLAST of Lsi02G010280 vs. TAIR10
Match: AT5G45100.1 (AT5G45100.1 SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-51
Identity = 143/326 (43.87%), Postives = 192/326 (58.90%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAAVKA 60
           MAVEAR MNL  SQ+I   NR+ +K           N  N Q I     P       ++ 
Sbjct: 1   MAVEARHMNLFSSQYI--TNRECVKSQT--------NMNNGQQIAGGGFPVTIGDRNLQY 60

Query: 61  VLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPG----------GSFPR 120
           + P   +N+F      K+ES LT+ +       KR R S +D                P 
Sbjct: 61  IDP---INSF-----NKSESELTAIS-------KRQRDSTFDSDALIASQKRRAIAFSPA 120

Query: 121 RLLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEK 180
            L+D E++ S IQQQ SEIDRF+A   E +R+E+E R++ ++ ML  A++  ++KKLK K
Sbjct: 121 SLIDAELV-SQIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAK 180

Query: 181 EEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANNVVA-- 240
           +EEI RMGKLNWVLQERVK L +ENQ+WRDLA++NEAT N+LR+NLEQV+   +++ A  
Sbjct: 181 DEEIIRMGKLNWVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDDLDAFR 240

Query: 241 ------AEEAESSCGSTTAAAEEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCTM 300
                 A++AESSCGS        +     +GG   C++CG   + VLVLPCRHLCLCT+
Sbjct: 241 RPLVEEADDAESSCGSCDGG----DVTAVVNGG---CKRCGELTASVLVLPCRHLCLCTV 293

Query: 301 CGST--LHTCPVCNSTINASVHVNFS 307
           CGS+  L TCPVC+  + ASVHVN S
Sbjct: 301 CGSSALLRTCPVCDMVMTASVHVNMS 293

[Close]

BLAST of Lsi02G010280 vs. TAIR10
Match: AT4G19700.1 (AT4G19700.1 SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 194.5 bits (493), Expect = 9.5e-50
Identity = 143/326 (43.87%), Postives = 192/326 (58.90%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAAVK- 60
           MAV+A  MN+  SQFI PN RD +K  +      N N    +      T G  P    + 
Sbjct: 1   MAVQAHHMNIF-SQFISPN-RDCVKFQE------NMNHGEFEF-----TGGEVPLITGES 60

Query: 61  -AVLPPETVNNFAMYDWGKAESGLTSNNFSTAP-TRKRTRRSVYDEPGGSFPRR------ 120
            AV P     NF      KAESGL S NF+  P + KR R   + +      RR      
Sbjct: 61  FAVEPLAAKANF-----NKAESGL-SYNFTVPPLSTKRQRDFQFSDSNAPVKRRSVAFDS 120

Query: 121 ----LLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKL 180
               L++ E+++    QQQSEIDRF+A   EK+R+E+E R++ ++ ML  A++  + KKL
Sbjct: 121 SSPSLINVELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKL 180

Query: 181 KEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVI-----LA 240
           KEK++EI R+  LNWVLQERVK L +ENQ+WRD+A++NEA  N+LR NL+QV+       
Sbjct: 181 KEKDDEIVRIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFP 240

Query: 241 ANNVVAAEEAESSCGSTTAAAEEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCTM 300
             + V  ++AESSCGS     +   E   + GGG  C++CG  E+ VLVLPCRHLCLCT+
Sbjct: 241 TASAVVEDDAESSCGS--CCGDGGGEAVTAVGGG--CKRCGEREASVLVLPCRHLCLCTV 300

Query: 301 CGST--LHTCPVCNSTINASVHVNFS 307
           CG +  L TCPVC+  +NASVHVN S
Sbjct: 301 CGGSALLRTCPVCDMVMNASVHVNMS 303

[Close]

BLAST of Lsi02G010280 vs. TAIR10
Match: AT1G79110.1 (AT1G79110.1 zinc ion binding)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-45
Identity = 136/362 (37.57%), Postives = 192/362 (53.04%), Query Frame = 1


Query: 1   MAVEARRMNLLPSQFIIPNNRDFIKQNQGIVD----ICNQNKTNTQMIPATETPGLWPYA 60
           MAV+A  + L P Q    +NR+    N  +       CN N+T   ++     P    + 
Sbjct: 1   MAVDAHHLFLSPPQLF--SNRELTMNNNTMEPTSGGFCNNNQTGYGVVSPFSVPN---HT 60

Query: 61  AVKAVLPPETVNNFAMYDWGKAESGLTSNN-------FSTAPTRKRTR---RSVYDEPGG 120
           +      P  ++ +   D     +G  ++        F   PTRKR+R   RS Y     
Sbjct: 61  STTTTATPPLLHVYGGSDTIPTTAGYYADGATNLDCEFFPLPTRKRSRDSSRSNYHHLLL 120

Query: 121 SFPRR-----------------LLDEEI-INSHIQQQQSEIDRFIAIH---REKMRMEME 180
             PR                   L ++I I+SH+ QQQ EIDRF+++H    E+++ E+E
Sbjct: 121 QNPRSSSCVNAATTTTTTTLFSFLGQDIDISSHMNQQQHEIDRFVSLHLYQMERVKYEIE 180

Query: 181 VRKKRESGMLVRAIEERVVKKLKEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESN 240
            ++KR++  ++ AIE+ +VK+L+ KEEE ER+GK+N  L+ERVK L +ENQ+WRDLA++N
Sbjct: 181 EKRKRQARTIMEAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQIWRDLAQTN 240

Query: 241 EATVNSLRNNLEQVILAA----------NNVVAAEEAESSCGSTTAAAEEEEE------E 300
           EAT N LR NLE V+              N+   ++AES CGS+     EE        E
Sbjct: 241 EATANHLRTNLEHVLAQVKDVSRGAGLEKNMNEEDDAESCCGSSCGGGGEETVRRRVGLE 300

Query: 301 EESSGGGER-----CRKCGAGESRVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVN 307
            E+    ER     CR CG  ES VL+LPCRHLCLC +CGS++HTCP+C S  NASVHVN
Sbjct: 301 REAQDKAERRRRRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVN 357

[Close]

BLAST of Lsi02G010280 vs. TAIR10
Match: AT3G12920.1 (AT3G12920.1 SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 172.6 bits (436), Expect = 3.9e-43
Identity = 96/205 (46.83%), Postives = 141/205 (68.78%), Query Frame = 1


Query: 118 INSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEEEIERM 177
           ++S++QQ   +IDR I+ H E+MRME+E ++K +   +V A+E+ ++K L+ K++EI  +
Sbjct: 130 LSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHI 189

Query: 178 GKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN------VVAAEE 237
           GKLN  L+E+VK LC+ENQ+WRD+A+SNEATVN+LR+NL+QV+ A            A++
Sbjct: 190 GKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADD 249

Query: 238 AESSCGSTTAAAEEEE------EEEESSG----GGERCRKCGAGESRVLVLPCRHLCLCT 297
           A+S CGS      EEE      E +++      G   CR CG GE+ VL+LPCRH+CLC+
Sbjct: 250 AQSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLCS 309

Query: 298 MCGSTLHTCPVCNSTINASVHVNFS 307
           +CGS+L+TCP+C S   AS+HVN S
Sbjct: 310 VCGSSLNTCPICKSPKTASLHVNLS 334

[Close]

BLAST of Lsi02G010280 vs. TAIR10
Match: AT4G35070.1 (AT4G35070.1 SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-19
Identity = 66/187 (35.29%), Postives = 105/187 (56.15%), Query Frame = 1


Query: 115 EEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEEEI 174
           +  + + +++Q+ EID+FI I  E++R  ++ ++KRE  M++R +E + +  + +KEEE+
Sbjct: 71  QSFLAAQMEKQKQEIDQFIKIQNERLRYVLQEQRKREMEMILRKMESKALLLMSQKEEEM 130

Query: 175 ERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANNVVAAEEAE- 234
            +    N  L++ ++++ MENQ W+ +A  NEA V +L   LEQV   A     A EAE 
Sbjct: 131 SKALNKNMELEDLLRKMEMENQTWQRMARENEAIVQTLNTTLEQVRERAATCYDAGEAEV 190

Query: 235 ----SSCGSTTAAAEEEEEEEESSGGGERCRKCGA-GESRVLVLPCRHLCLCTMCGSTLH 294
               S CG          ++ + S     C  CG+ G +RVL LPCRHLC C  C   L 
Sbjct: 191 EDEGSFCGGEGDGNSLPAKKMKMSSC---CCNCGSNGVTRVLFLPCRHLCCCMDCEEGLL 250

Query: 295 TCPVCNS 296
            CP+CN+
Sbjct: 251 LCPICNT 254

[Close]

BLAST of Lsi02G010280 vs. NCBI nr
Match: gi|659118328|ref|XP_008459064.1| (PREDICTED: E3 ubiquitin-protein ligase BOI-like [Cucumis melo])

HSP 1 Score: 440.3 bits (1131), Expect = 2.8e-120
Identity = 258/325 (79.38%), Postives = 272/325 (83.69%), Query Frame = 1


Query: 1   MAVEARRMNLLPS-QFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATET--PGL-WPYA 60
           MAVEAR MNLLPS QFIIPNNRDFIKQNQ +         +T M P T+T  PG+ WPY 
Sbjct: 1   MAVEARPMNLLPSHQFIIPNNRDFIKQNQELA--------STHMTPTTDTTTPGIIWPYT 60

Query: 61  AVK-AVLPPETVNNFA--MYDWGKAESGLTSNNF-STAPTRKRTR-RSVYDEPGGSFPRR 120
           AVK AV P  T+NNFA  MYDWGKAESGLTSNNF STAPTRKRTR RS YDEPGG    R
Sbjct: 61  AVKPAVTPEATLNNFATTMYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEPGG----R 120

Query: 121 LLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKE 180
           LLDEEIINSHIQQQQSE+DRFIAIHREKMR+EME+RKKRESGMLVRAIEERVVKKLKEKE
Sbjct: 121 LLDEEIINSHIQQQQSEMDRFIAIHREKMRIEMEIRKKRESGMLVRAIEERVVKKLKEKE 180

Query: 181 EEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN-----V 240
           EEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVN LRNNLEQVIL A N     V
Sbjct: 181 EEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGV 240

Query: 241 VAA----EEAESSCGSTTAAAEEEEEEEES-SGGGERCRKCGAGESRVLVLPCRHLCLCT 300
             A    E+AESSCGST+    +EEEEEE+ SGGG RCRKCGAGESRVLVLPCRHLCLCT
Sbjct: 241 AGAKEKEEKAESSCGSTSECGRKEEEEEEAESGGGGRCRKCGAGESRVLVLPCRHLCLCT 300

Query: 301 MCGSTLHTCPVCNSTINASVHVNFS 307
           MCGST+H+CPVCNS INASVHVNFS
Sbjct: 301 MCGSTIHSCPVCNSAINASVHVNFS 313

[Close]

BLAST of Lsi02G010280 vs. NCBI nr
Match: gi|778664604|ref|XP_004145480.2| (PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Cucumis sativus])

HSP 1 Score: 437.2 bits (1123), Expect = 2.4e-119
Identity = 257/325 (79.08%), Postives = 271/325 (83.38%), Query Frame = 1


Query: 1   MAVEARRMNLLPS-QFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATET--PGL-WPYA 60
           MAVEAR MNLLPS QFIIPN+RDFIKQNQ +         NT M P T+T  PG+ WPY 
Sbjct: 1   MAVEARPMNLLPSHQFIIPNDRDFIKQNQELA--------NTHMTPVTDTTTPGIIWPYT 60

Query: 61  AVK-AVLPPETVNNFA-MYDWGKAESGLTSNNF-STAPTRKRTR-RSVYDEPGGSFPRRL 120
           AVK AV P  T+NNFA +YDWGKAESGLTSNNF STAPTRKRTR RS YDEPGG    RL
Sbjct: 61  AVKPAVTPETTLNNFATVYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEPGG----RL 120

Query: 121 LDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEE 180
           LDEEIINSHIQQQQSE+DRFIAIHREKMR+EME+RKKRESGMLVRAIEERVVKKLKEKEE
Sbjct: 121 LDEEIINSHIQQQQSEMDRFIAIHREKMRIEMEMRKKRESGMLVRAIEERVVKKLKEKEE 180

Query: 181 EIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN-----VV 240
           EIERMGKLNWVLQERVKRLC+ENQVWRDLAESNEATVN LRNNLEQVIL A N     V 
Sbjct: 181 EIERMGKLNWVLQERVKRLCVENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVA 240

Query: 241 AA----EEAESSCGSTTAAA--EEEEEEEESSGGGERCRKCGAGESRVLVLPCRHLCLCT 300
            A    E+AESSCGST+     EEEEEE ES GGG RCRKCGAGESRVLVLPCRHLCLCT
Sbjct: 241 GAKEKEEKAESSCGSTSECGRKEEEEEEAESGGGGGRCRKCGAGESRVLVLPCRHLCLCT 300

Query: 301 MCGSTLHTCPVCNSTINASVHVNFS 307
           MCGST+H+CPVCNS INASVHVNFS
Sbjct: 301 MCGSTIHSCPVCNSAINASVHVNFS 313

[Close]

BLAST of Lsi02G010280 vs. NCBI nr
Match: gi|595863416|ref|XP_007211578.1| (hypothetical protein PRUPE_ppa008499mg [Prunus persica])

HSP 1 Score: 250.8 bits (639), Expect = 3.2e-63
Identity = 166/340 (48.82%), Postives = 216/340 (63.53%), Query Frame = 1


Query: 1   MAVEARRMN---LLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWP-YA 60
           MAVEA+ ++   L+PSQ I   NRDFIK NQG  +I +    +  ++ AT    L P Y 
Sbjct: 1   MAVEAQHLHHAALIPSQLI--PNRDFIKTNQGNANIYSTQMDSGLILSATMPENLLPMYQ 60

Query: 61  AVKAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFPRR----- 120
           +        ++N        +AESGLT NN S AP ++   + + D    S P++     
Sbjct: 61  SPFCEANKASMNK-------QAESGLTYNNIS-APRKRPRDQLINDFNNFSVPQKTKMSV 120

Query: 121 ----LLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKL 180
                +D++I    IQQQQSEIDRFIA H EK+RME+E ++K++S +LV AI+ER+VKKL
Sbjct: 121 GASSFIDQDIA-FQIQQQQSEIDRFIAQHTEKVRMELEEQRKQQSRLLVSAIQERIVKKL 180

Query: 181 KEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN-- 240
           KEK+EEI+RMGKLNWVLQERVK L +ENQ+WRD+A++NEA  NSLR NLEQV+   +   
Sbjct: 181 KEKDEEIQRMGKLNWVLQERVKSLFVENQIWRDMAQTNEAAANSLRTNLEQVLAHVSEEH 240

Query: 241 --------VVAAEEAESSCGSTTAAAEEEEEE----------EESSGGGER-CRKCGAGE 300
                      A++A+SSCGS     +EE  +              GGG+R C++CG  E
Sbjct: 241 QAGGGPPAAAVADDAQSSCGSNDYGRDEEAVDGGDAVVGGGGNGGCGGGDRMCKRCGVRE 300

Query: 301 SRVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVNFS 307
           SRVL+LPCRHLCLCTMCGSTL  CPVCNS +NASVHVNFS
Sbjct: 301 SRVLLLPCRHLCLCTMCGSTLLNCPVCNSVMNASVHVNFS 329

[Close]

BLAST of Lsi02G010280 vs. NCBI nr
Match: gi|645238681|ref|XP_008225790.1| (PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Prunus mume])

HSP 1 Score: 248.1 bits (632), Expect = 2.1e-62
Identity = 164/340 (48.24%), Postives = 214/340 (62.94%), Query Frame = 1


Query: 1   MAVEARRMN---LLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWP-YA 60
           MAVEA+  +   L+PSQ I   NRDFIK NQG  +I +    +  ++  T    L P Y 
Sbjct: 1   MAVEAQHHHHAGLIPSQLI--PNRDFIKTNQGTANIYSTQMDSGLLLSTTMPENLLPMYQ 60

Query: 61  AVKAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFPRR----- 120
           +        ++N        +AESGLT NN S AP ++   + + D    S P++     
Sbjct: 61  SPFCEANKASMNK-------QAESGLTYNNIS-APRKRPRDQLINDFNNFSVPQKSKMSV 120

Query: 121 ----LLDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKL 180
                +D++I    IQQQQSEIDRFIA H EK+RME+E ++K++S +LV AI+ER+VKKL
Sbjct: 121 GASSFIDQDIA-FQIQQQQSEIDRFIAQHTEKVRMELEEQRKQQSRLLVSAIQERIVKKL 180

Query: 181 KEKEEEIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN-- 240
           KEK+EEI+RMGKLNWVLQERVK L +ENQ+WRD+A++NEA  NSLR NLEQV+   +   
Sbjct: 181 KEKDEEIQRMGKLNWVLQERVKSLFLENQIWRDMAQTNEAAANSLRTNLEQVLAHVSEEH 240

Query: 241 --------VVAAEEAESSCGSTTAAAEEEEEE----------EESSGGGER-CRKCGAGE 300
                      A++A+SSCGS     +E+  +              GGG+R C++CG  E
Sbjct: 241 QAGGGPAAAAVADDAQSSCGSNDYGRDEDAVDGGDAVVGGGGNGGCGGGDRMCKRCGVRE 300

Query: 301 SRVLVLPCRHLCLCTMCGSTLHTCPVCNSTINASVHVNFS 307
           SRVL+LPCRHLCLCTMCGSTL  CPVCNS +NASVHVNFS
Sbjct: 301 SRVLLLPCRHLCLCTMCGSTLLNCPVCNSVMNASVHVNFS 329

[Close]

BLAST of Lsi02G010280 vs. NCBI nr
Match: gi|694343202|ref|XP_009357271.1| (PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Pyrus x bretschneideri])

HSP 1 Score: 243.4 bits (620), Expect = 5.1e-61
Identity = 165/332 (49.70%), Postives = 206/332 (62.05%), Query Frame = 1


Query: 1   MAVEARRMN---LLPSQFIIPNNRDFIKQNQGIVDICNQNKTNTQMIPATETPGLWPYAA 60
           MAVEA+  +   L+P Q I   NRDFIK NQG     N N  + QM          P   
Sbjct: 1   MAVEAQHHHHVVLIPPQLI--PNRDFIKTNQG-----NPNIYSAQMDSGLLLSTAMPENL 60

Query: 61  VKAVLPPETVNNFAMYDWGKAESGLTSNNFSTAPTRKRTRRSVYDEPGGSFPRR-----L 120
           +     P    N A  +   A+SGLT NN S AP ++   + + D    S P++      
Sbjct: 61  LPMYQSPFYDANKASMNKEAADSGLTYNNIS-APRKRPREQLINDFNNFSVPQKTKISSF 120

Query: 121 LDEEIINSHIQQQQSEIDRFIAIHREKMRMEMEVRKKRESGMLVRAIEERVVKKLKEKEE 180
           LD++I    IQQQQSEID FIA H EK+R+E+E ++K++S MLV  I++R+VKKLKEK+E
Sbjct: 121 LDQDIA-FQIQQQQSEIDHFIAQHTEKVRLELEEQRKQQSRMLVSEIQDRIVKKLKEKDE 180

Query: 181 EIERMGKLNWVLQERVKRLCMENQVWRDLAESNEATVNSLRNNLEQVILAANN------- 240
           EI+RMGKLNWVLQERVK L  ENQ+WRDLA++NEAT NSLR NLEQV+   N+       
Sbjct: 181 EIQRMGKLNWVLQERVKSLFAENQIWRDLAQTNEATANSLRTNLEQVLAHVNDDHHAGGS 240

Query: 241 ----VVAAEEAESSCGSTTAAAEEEEEEEES------SGGGER-CRKCGAGESRVLVLPC 300
                  A++A+S CGS     + E  +  +      SGGG+R C+ CG  ESRVL+LPC
Sbjct: 241 GAMATALADDAQSFCGSNEYGRDIEAVDSGNAAVRGGSGGGDRMCKSCGGRESRVLLLPC 300

Query: 301 RHLCLCTMCGSTLHTCPVCNSTINASVHVNFS 307
           RHLCLCTMCGSTL  CP CNS INASVHVNFS
Sbjct: 301 RHLCLCTMCGSTLLNCPACNSVINASVHVNFS 323

The following BLAST results are available for this feature:

BLAST of Lsi02G010280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BRG1_ARATH	3.1e-50	43.87	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana GN=BRG1 PE=1 S...	[more]
BOI_ARATH	1.7e-48	43.87	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana GN=BOI PE=1 SV=1	[more]
BRG2_ARATH	2.5e-44	37.57	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana GN=BR...	[more]
BRG3_ARATH	6.9e-42	46.83	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana GN=BR...	[more]

BLAST of Lsi02G010280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3V5_CUCSA	1.7e-119	79.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707120 PE=4 SV=1	[more]
M5WG53_PRUPE	2.2e-63	48.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008499mg PE=4 SV=1	[more]
A0A0B2PFD3_GLYSO	1.0e-60	47.49	Uncharacterized protein OS=Glycine soja GN=glysoja_023630 PE=4 SV=1	[more]
A0A061GDM4_THECC	1.0e-60	50.59	SBP family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_029357 PE=4 SV=...	[more]
A0A061GKA6_THECC	1.3e-60	50.60	SBP family protein, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_0293...	[more]

BLAST of Lsi02G010280 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45100.1	1.7e-51	43.87	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G19700.1	9.5e-50	43.87	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G79110.1	1.4e-45	37.57	zinc ion binding	[more]
AT3G12920.1	3.9e-43	46.83	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G35070.1	1.3e-19	35.29	SBP (S-ribonuclease binding protein) family protein	[more]

BLAST of Lsi02G010280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118328\|ref\|XP_008459064.1\|	2.8e-120	79.38	PREDICTED: E3 ubiquitin-protein ligase BOI-like [Cucumis melo]	[more]
gi\|778664604\|ref\|XP_004145480.2\|	2.4e-119	79.08	PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Cucumis sativus]	[more]
gi\|595863416\|ref\|XP_007211578.1\|	3.2e-63	48.82	hypothetical protein PRUPE_ppa008499mg [Prunus persica]	[more]
gi\|645238681\|ref\|XP_008225790.1\|	2.1e-62	48.24	PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Prunus mume]	[more]
gi\|694343202\|ref\|XP_009357271.1\|	5.1e-61	49.70	PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Pyrus x bretschneider...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0031347	regulation of defense response
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010280.1	Lsi02G010280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 259..294 score:
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 243..300 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 213..249 score: -coord: 156..177 scor
None	No IPR available	PANTHER	PTHR10044	INHIBITOR OF APOPTOSIS	coord: 1..306 score: 8.3E
None	No IPR available	PANTHER	PTHR10044:SF121	SUBFAMILY NOT NAMED	coord: 1..306 score: 8.3E
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 258..298 score: 1.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G010280	Csa1G707120	Cucumber (Chinese Long) v2	culsiB026
Lsi02G010280	CSPI01G34670	Wild cucumber (PI 183967)	cpilsiB034
Lsi02G010280	Cucsa.236480	Cucumber (Gy14) v1	cgylsiB386
Lsi02G010280	CmaCh13G004350	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010280	CmaCh18G005470	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010280	CmoCh18G005270	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G010280	CmoCh13G004690	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010280	Cla000996	Watermelon (97103) v1	lsiwmB206
Lsi02G010280	MELO3C021779	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010280	ClCG01G009390	Watermelon (Charleston Gray)	lsiwcgB177
Lsi02G010280	MELO3C021779.2	Melon (DHL92) v3.6.1	lsimedB190
Lsi02G010280	Cla97C01G009450	Watermelon (97103) v2	lsiwmbB153
Lsi02G010280	Bhi08G000762	Wax gourd	lsiwgoB255
Lsi02G010280	Cp4.1LG20g06100	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010280	Cp4.1LG09g06910	Cucurbita pepo (Zucchini)	cpelsiB026
Lsi02G010280	CsGy1G033130	Cucumber (Gy14) v2	cgyblsiB022
Lsi02G010280	Carg21446	Silver-seed gourd	carlsiB362
Lsi02G010280	Carg25414	Silver-seed gourd	carlsiB408
Lsi02G010280	CsaV3_1G046530	Cucumber (Chinese Long) v3	cuclsiB034

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010280	Cucumber (Chinese Long) v3	cuclsiB026
Lsi02G010280	Cucumber (Gy14) v1	cgylsiB385
Lsi02G010280	Wild cucumber (PI 183967)	cpilsiB026
Lsi02G010280	Cucumber (Chinese Long) v2	culsiB033
Lsi02G010280	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010280	Cucumber (Gy14) v2	cgyblsiB030