Carg21446 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21446
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	E3 ubiquitin-protein ligase BOI-like
Location	Cucurbita_argyrosperma_scaffold_103 : 401009 .. 402128 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGACTTCGTTTCTCTCTCTTAAAATCCCTTGAATTAAAACCCAAACTTCCCCTTCCTTCCTCTCTGAATTTCCATGGCAGTTGAAGCACGGCGTATGAATCATCTACCGTCTCCGTTCATCACCAACAATGGGTGCTTGCCTTAACCTGCAACTCTTTTGGGTCTCTGTTTTTCCTCTTATACTCTGTTTTTCTCATCTGGGTTTCGTTCTGTTTCAGAGATTTCATGAAACAGAGTCAAGAAGTTCTTGATATCTACAATTACAAAACGATGCCGGTGGAAACCGCCGGATTATGGCCTTATGTTGCCGGGAAATCCGTGCCGGAGATTGTTAACAATTTCCCCGCCGATAGTGGATTGACTTCCAATAACTTCCCCGCCGCGCCGGTTCGAAAGCGACAGAGACGGTCGGGATACGAGGAACCGCCATGTCCATTCCCTTGCAGGTTGTCGGATGAAGAAATCATTAACTCCCACGTTCAGCAGCAGCAATCGGAAATCGACCGGTTTATTGCGATCCATGTAAGTGGTCTCTCTGTTCCTCTGTTTTTGAATTTGTTTGAAAATTTGGGGAAATTAATTAATGGGTTTTTGTTATTTTTAATGAAATTACAGAGGGAGAAGGTGAGAATGGCAATGGAGATTCGGAAGAAGAGGGAATCTGGAATGTTGGTGAGAGCTATAGAGGAGAGATTGGTGAAGAAATTGAAGGAGAAAGACGAGGAGATTGAAAGAATGGGGAAATTGAATTGGGTATTGCAAGAGAGAGTGAAACGGCTGTGTATGGAGAATCAGCTATGGCGGGATTTGGCGGAGACGAATGAAGCCACCGTCAATTCTCTCAGAACCAACTTGGAGCGGTTGATTTCTGCCGCTAATGACACCGCCGCCGCCGCAAATGATGCAGAGTCTAGCTGTGGGAGTAATAGTGGCTGTGGAATAACAGAGGAGGAGAGCGGCGGTGGAAGGCGGTGCCGGAAGTGTATGGCGGGGGAATCGAGGGTGTTAGTGTTGCCATGTAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACACTGCATACTTGCCCTGTATGTGACTCTGCCATTAATGCCAGCGTCCATGTTAATTTTTCTTAG

mRNA sequence

TTGACTTCGTTTCTCTCTCTTAAAATCCCTTGAATTAAAACCCAAACTTCCCCTTCCTTCCTCTCTGAATTTCCATGGCAGTTGAAGCACGGCGTATGAATCATCTACCGTCTCCGTTCATCACCAACAATGGAGATTTCATGAAACAGAGTCAAGAAGTTCTTGATATCTACAATTACAAAACGATGCCGGTGGAAACCGCCGGATTATGGCCTTATGTTGCCGGGAAATCCGTGCCGGAGATTGTTAACAATTTCCCCGCCGATAGTGGATTGACTTCCAATAACTTCCCCGCCGCGCCGGTTCGAAAGCGACAGAGACGGTCGGGATACGAGGAACCGCCATGTCCATTCCCTTGCAGGTTGTCGGATGAAGAAATCATTAACTCCCACGTTCAGCAGCAGCAATCGGAAATCGACCGGTTTATTGCGATCCATAGGGAGAAGGTGAGAATGGCAATGGAGATTCGGAAGAAGAGGGAATCTGGAATGTTGGTGAGAGCTATAGAGGAGAGATTGGTGAAGAAATTGAAGGAGAAAGACGAGGAGATTGAAAGAATGGGGAAATTGAATTGGGTATTGCAAGAGAGAGTGAAACGGCTGTGTATGGAGAATCAGCTATGGCGGGATTTGGCGGAGACGAATGAAGCCACCGTCAATTCTCTCAGAACCAACTTGGAGCGGTTGATTTCTGCCGCTAATGACACCGCCGCCGCCGCAAATGATGCAGAGTCTAGCTGTGGGAGTAATAGTGGCTGTGGAATAACAGAGGAGGAGAGCGGCGGTGGAAGGCGGTGCCGGAAGTGTATGGCGGGGGAATCGAGGGTGTTAGTGTTGCCATGTAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACACTGCATACTTGCCCTGTATGTGACTCTGCCATTAATGCCAGCGTCCATGTTAATTTTTCTTAG

Coding sequence (CDS)

ATGGCAGTTGAAGCACGGCGTATGAATCATCTACCGTCTCCGTTCATCACCAACAATGGAGATTTCATGAAACAGAGTCAAGAAGTTCTTGATATCTACAATTACAAAACGATGCCGGTGGAAACCGCCGGATTATGGCCTTATGTTGCCGGGAAATCCGTGCCGGAGATTGTTAACAATTTCCCCGCCGATAGTGGATTGACTTCCAATAACTTCCCCGCCGCGCCGGTTCGAAAGCGACAGAGACGGTCGGGATACGAGGAACCGCCATGTCCATTCCCTTGCAGGTTGTCGGATGAAGAAATCATTAACTCCCACGTTCAGCAGCAGCAATCGGAAATCGACCGGTTTATTGCGATCCATAGGGAGAAGGTGAGAATGGCAATGGAGATTCGGAAGAAGAGGGAATCTGGAATGTTGGTGAGAGCTATAGAGGAGAGATTGGTGAAGAAATTGAAGGAGAAAGACGAGGAGATTGAAAGAATGGGGAAATTGAATTGGGTATTGCAAGAGAGAGTGAAACGGCTGTGTATGGAGAATCAGCTATGGCGGGATTTGGCGGAGACGAATGAAGCCACCGTCAATTCTCTCAGAACCAACTTGGAGCGGTTGATTTCTGCCGCTAATGACACCGCCGCCGCCGCAAATGATGCAGAGTCTAGCTGTGGGAGTAATAGTGGCTGTGGAATAACAGAGGAGGAGAGCGGCGGTGGAAGGCGGTGCCGGAAGTGTATGGCGGGGGAATCGAGGGTGTTAGTGTTGCCATGTAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACACTGCATACTTGCCCTGTATGTGACTCTGCCATTAATGCCAGCGTCCATGTTAATTTTTCTTAG

Protein sequence

MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKSVPEIVNNFPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAESSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS

Homology

[Close]

BLAST of Carg21446 vs. NCBI nr
Match: XP_022927535.1 (BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita moschata])

HSP 1 Score: 571.6 bits (1472), Expect = 1.5e-159
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKSVPEIVNN 60
           MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKSVPEIVNN
Sbjct: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKSVPEIVNN 60

Query: 61  FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI 120
           FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI
Sbjct: 61  FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI 120

Query: 121 HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN 180
           HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN
Sbjct: 121 HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN 180

Query: 181 QLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAESSCGSNSGCGITEEESGGGRR 240
           QLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAESSCGSNSGCGITEEESGGGRR
Sbjct: 181 QLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAESSCGSNSGCGITEEESGGGRR 240

Query: 241 CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 289
           CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS
Sbjct: 241 CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 288

[Close]

BLAST of Carg21446 vs. NCBI nr
Match: XP_023519053.1 (BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.1 bits (1455), Expect = 1.4e-157
Identity = 285/288 (98.96%), Postives = 285/288 (98.96%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKSVPEIVNN 60
           MAVEARRMNHLPSPFITNNGDFMKQSQEVLDI NYKTMPVETAGLWPYVAGKSVPEIVNN
Sbjct: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDICNYKTMPVETAGLWPYVAGKSVPEIVNN 60

Query: 61  FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI 120
           FPADSGLTSNNFPAAP RKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI
Sbjct: 61  FPADSGLTSNNFPAAPARKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI 120

Query: 121 HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN 180
           HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN
Sbjct: 121 HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN 180

Query: 181 QLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAESSCGSNSGCGITEEESGGGRR 240
           QLWRDLAETNEATVNSLRTNLERLISAANDTA AANDAESSCGSNSGCGITEEESGGGRR
Sbjct: 181 QLWRDLAETNEATVNSLRTNLERLISAANDTATAANDAESSCGSNSGCGITEEESGGGRR 240

Query: 241 CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 289
           CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS
Sbjct: 241 CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 288

[Close]

BLAST of Carg21446 vs. NCBI nr
Match: XP_023001155.1 (BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita maxima])

HSP 1 Score: 503.8 bits (1296), Expect = 3.8e-139
Identity = 260/292 (89.04%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKSVPEIVNN 60
           MAVEARRMNHLPSPFITNNGDFMKQSQEVLDI NYKTMP ETAGLWPY++GKSVPEIVNN
Sbjct: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDICNYKTMPAETAGLWPYISGKSVPEIVNN 60

Query: 61  FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI 120
           FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI
Sbjct: 61  FPADSGLTSNNFPAAPVRKRQRRSGYEEPPCPFPCRLSDEEIINSHVQQQQSEIDRFIAI 120

Query: 121 HREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN 180
           HREKVRMAME+RKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN
Sbjct: 121 HREKVRMAMEVRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLNWVLQERVKRLCMEN 180

Query: 181 QLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAE----SSCGSNSGCGITEEESG 240
           QLWRDLAETNEATVNSLRTNLERLISAAN+TAAA NDAE                     
Sbjct: 181 QLWRDLAETNEATVNSLRTNLERLISAANETAAAGNDAEXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 GGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 289
               CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS
Sbjct: 241 XXXXCRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 292

[Close]

BLAST of Carg21446 vs. NCBI nr
Match: XP_008459064.1 (PREDICTED: E3 ubiquitin-protein ligase BOI-like [Cucumis melo])

HSP 1 Score: 320.1 bits (819), Expect = 7.8e-84
Identity = 198/317 (62.46%), Postives = 220/317 (69.40%), Query Frame = 0


Query: 1   MAVEARRMNHLPSP--FITNNGDFMKQSQEVLDIYNYKTMPVETAG-LWPYVAGKS--VP 60
           MAVEAR MN LPS    I NN DF+KQ+QE+   +   T    T G +WPY A K    P
Sbjct: 1   MAVEARPMNLLPSHQFIIPNNRDFIKQNQELASTHMTPTTDTTTPGIIWPYTAVKPAVTP 60

Query: 61  E-IVNNF--------PADSGLTSNNFPA-APVRKRQR-RSGYEEPPCPFPCRLSDEEIIN 120
           E  +NNF         A+SGLTSNNFP+ AP RKR R RS Y+EP      RL DEEIIN
Sbjct: 61  EATLNNFATTMYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEP----GGRLLDEEIIN 120

Query: 121 SHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGK 180
           SH+QQQQSE+DRFIAIHREK+R+ MEIRKKRESGMLVRAIEER+VKKLKEK+EEIERMGK
Sbjct: 121 SHIQQQQSEMDRFIAIHREKMRIEMEIRKKRESGMLVRAIEERVVKKLKEKEEEIERMGK 180

Query: 181 LNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLI-SAANDTAAAANDA----- 240
           LNWVLQERVKRLCMENQ+WRDLAE+NEATVN LR NLE++I  AAN        A     
Sbjct: 181 LNWVLQERVKRLCMENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVAGAXXXXX 240

Query: 241 -------ESSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHT 289
                                        CRKC AGESRVLVLPCRHLCLCTMCGST+H+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKCGAGESRVLVLPCRHLCLCTMCGSTIHS 300

[Close]

BLAST of Carg21446 vs. NCBI nr
Match: XP_004145480.2 (PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Cucumis sativus] >KGN66896.1 hypothetical protein Csa_1G707120 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 5.6e-82
Identity = 194/317 (61.20%), Postives = 220/317 (69.40%), Query Frame = 0


Query: 1   MAVEARRMNHLPSP--FITNNGDFMKQSQEVLDIYNYKTMPVETAG-LWPYVAGKS--VP 60
           MAVEAR MN LPS    I N+ DF+KQ+QE+ + +        T G +WPY A K    P
Sbjct: 1   MAVEARPMNLLPSHQFIIPNDRDFIKQNQELANTHMTPVTDTTTPGIIWPYTAVKPAVTP 60

Query: 61  E-IVNNF-------PADSGLTSNNFPA-APVRKRQR-RSGYEEPPCPFPCRLSDEEIINS 120
           E  +NNF        A+SGLTSNNFP+ AP RKR R RS Y+EP      RL DEEIINS
Sbjct: 61  ETTLNNFATVYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEP----GGRLLDEEIINS 120

Query: 121 HVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKL 180
           H+QQQQSE+DRFIAIHREK+R+ ME+RKKRESGMLVRAIEER+VKKLKEK+EEIERMGKL
Sbjct: 121 HIQQQQSEMDRFIAIHREKMRIEMEMRKKRESGMLVRAIEERVVKKLKEKEEEIERMGKL 180

Query: 181 NWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLI-SAANDTAAAANDA------ 240
           NWVLQERVKRLC+ENQ+WRDLAE+NEATVN LR NLE++I  AAN        A      
Sbjct: 181 NWVLQERVKRLCVENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVAGAXXXXXX 240

Query: 241 -------ESSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHT 289
                                        CRKC AGESRVLVLPCRHLCLCTMCGST+H+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKCGAGESRVLVLPCRHLCLCTMCGSTIHS 300

[Close]

BLAST of Carg21446 vs. TAIR10
Match: AT5G45100.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 208.0 bits (528), Expect = 7.8e-54
Identity = 140/311 (45.02%), Postives = 185/311 (59.49%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGK---SVPEI 60
           MAVEAR MN   S +ITN      Q+       N         G +P   G       + 
Sbjct: 1   MAVEARHMNLFSSQYITNRECVKSQT-------NMNNGQQIAGGGFPVTIGDRNLQYIDP 60

Query: 61  VNNF-PADSGLTSNNFPAAPVRKRQRRSGYEEPP----------CPFPCRLSDEEIINSH 120
           +N+F  ++S LT+       + KRQR S ++                P  L D E++ S 
Sbjct: 61  INSFNKSESELTA-------ISKRQRDSTFDSDALIASQKRRAIAFSPASLIDAELV-SQ 120

Query: 121 VQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLN 180
           +QQQ SEIDRF+A   E +R+ +E R++ ++ ML  A++  ++KKLK KDEEI RMGKLN
Sbjct: 121 IQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLN 180

Query: 181 WVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAANDTAA-------AANDAE 240
           WVLQERVK L +ENQ+WRDLA+TNEAT N+LR+NLE++++  +D  A        A+DAE
Sbjct: 181 WVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDDLDAFRRPLVEEADDAE 240

Query: 241 SSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGST--LHTCPVCDS 289
           SSCGS  G  +T   +GG +RC +  A    VLVLPCRHLCLCT+CGS+  L TCPVCD 
Sbjct: 241 SSCGSCDGGDVTAVVNGGCKRCGELTAS---VLVLPCRHLCLCTVCGSSALLRTCPVCDM 293

[Close]

BLAST of Carg21446 vs. TAIR10
Match: AT4G19700.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 138/310 (44.52%), Postives = 189/310 (60.97%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKS-----VP 60
           MAV+A  MN + S FI+ N D +K  QE ++   ++     T G  P + G+S     + 
Sbjct: 1   MAVQAHHMN-IFSQFISPNRDCVK-FQENMNHGEFEF----TGGEVPLITGESFAVEPLA 60

Query: 61  EIVNNFPADSGLTSNNFPAAPV-RKRQRRSGYEEPPCPFPCR----------LSDEEIIN 120
              N   A+SGL S NF   P+  KRQR   + +   P   R          L + E+++
Sbjct: 61  AKANFNKAESGL-SYNFTVPPLSTKRQRDFQFSDSNAPVKRRSVAFDSSSPSLINVELVS 120

Query: 121 SHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGK 180
               QQQSEIDRF+A   EK+R+ +E R++ ++ ML  A++  + KKLKEKD+EI R+  
Sbjct: 121 QIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRN 180

Query: 181 LNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAAND----TAAAANDAES 240
           LNWVLQERVK L +ENQ+WRD+A+TNEA  N+LRTNL+++++        +A   +DAES
Sbjct: 181 LNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVEDDAES 240

Query: 241 SCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGST--LHTCPVCDSA 289
           SCGS  G G  E  +  G  C++C   E+ VLVLPCRHLCLCT+CG +  L TCPVCD  
Sbjct: 241 SCGSCCGDGGGEAVTAVGGGCKRCGEREASVLVLPCRHLCLCTVCGGSALLRTCPVCDMV 300

[Close]

BLAST of Carg21446 vs. TAIR10
Match: AT3G12920.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 95/206 (46.12%), Postives = 140/206 (67.96%), Query Frame = 0


Query: 103 INSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERM 162
           ++S+VQQ   +IDR I+ H E++RM +E ++K +   +V A+E+ L+K L+ KD+EI  +
Sbjct: 130 LSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHI 189

Query: 163 GKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAA-----NDTAAAAND 222
           GKLN  L+E+VK LC+ENQ+WRD+A++NEATVN+LR+NL+++++A       +    A+D
Sbjct: 190 GKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADD 249

Query: 223 AESSCGSNSGCGITEEESG---------------GGRRCRKCMAGESRVLVLPCRHLCLC 282
           A+S CGSN   G +EEE                 G   CR C  GE+ VL+LPCRH+CLC
Sbjct: 250 AQSCCGSNDE-GDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLC 309

Query: 283 TMCGSTLHTCPVCDSAINASVHVNFS 289
           ++CGS+L+TCP+C S   AS+HVN S
Sbjct: 310 SVCGSSLNTCPICKSPKTASLHVNLS 334

[Close]

BLAST of Carg21446 vs. TAIR10
Match: AT1G79110.1 (zinc ion binding)

HSP 1 Score: 156.8 bits (395), Expect = 2.1e-38
Identity = 93/213 (43.66%), Postives = 128/213 (60.09%), Query Frame = 0


Query: 103 INSHVQQQQSEIDRFIAIH---REKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEI 162
           I+SH+ QQQ EIDRF+++H    E+V+  +E ++KR++  ++ AIE+ LVK+L+ K+EE 
Sbjct: 145 ISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEER 204

Query: 163 ERMGKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAE 222
           ER+GK+N  L+ERVK L +ENQ+WRDLA+TNEAT N LRTNLE +++   D +  A   +
Sbjct: 205 ERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEK 264

Query: 223 S------------------------SCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLP 282
           +                                            CR C   ES VL+LP
Sbjct: 265 NMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRNCGEEESCVLLLP 324

Query: 283 CRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 289
           CRHLCLC +CGS++HTCP+C S  NASVHVN S
Sbjct: 325 CRHLCLCGVCGSSVHTCPICTSPKNASVHVNMS 357

[Close]

BLAST of Carg21446 vs. TAIR10
Match: AT1G45976.1 (S-ribonuclease binding protein 1)

HSP 1 Score: 98.6 bits (244), Expect = 6.7e-21
Identity = 62/180 (34.44%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 103 INSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERM 162
           I+  +Q+Q ++IDRF+ I  +++R A+  + KR     V  +EE++V+KL+EKDEE+ER+
Sbjct: 139 IDRELQRQDADIDRFLKIQGDQLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELERI 198

Query: 163 GKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAESSC 222
            + N  L+ R+++L ME + W+  A+ NE  + +L  NL+R      D+     D+E   
Sbjct: 199 NRKNKELEVRMEQLTMEAEAWQQRAKYNENMIAALNYNLDRAQGRPRDSIEGCGDSE--V 258

Query: 223 GSNSGCGITEEESGGGRR----CRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCDSA 279
              + C    + S    +    CR C   E  +L+LPC H+CLC  C   L +CP+C S+
Sbjct: 259 DDTASCFNGRDNSNNNTKTMMMCRFCGVREMCMLLLPCNHMCLCKECERKLSSCPLCQSS 316

[Close]

BLAST of Carg21446 vs. Swiss-Prot
Match: sp|Q9FHE4|BRG1_ARATH (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 140/311 (45.02%), Postives = 185/311 (59.49%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGK---SVPEI 60
           MAVEAR MN   S +ITN      Q+       N         G +P   G       + 
Sbjct: 1   MAVEARHMNLFSSQYITNRECVKSQT-------NMNNGQQIAGGGFPVTIGDRNLQYIDP 60

Query: 61  VNNF-PADSGLTSNNFPAAPVRKRQRRSGYEEPP----------CPFPCRLSDEEIINSH 120
           +N+F  ++S LT+       + KRQR S ++                P  L D E++ S 
Sbjct: 61  INSFNKSESELTA-------ISKRQRDSTFDSDALIASQKRRAIAFSPASLIDAELV-SQ 120

Query: 121 VQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKLN 180
           +QQQ SEIDRF+A   E +R+ +E R++ ++ ML  A++  ++KKLK KDEEI RMGKLN
Sbjct: 121 IQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKDEEIIRMGKLN 180

Query: 181 WVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAANDTAA-------AANDAE 240
           WVLQERVK L +ENQ+WRDLA+TNEAT N+LR+NLE++++  +D  A        A+DAE
Sbjct: 181 WVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDDLDAFRRPLVEEADDAE 240

Query: 241 SSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGST--LHTCPVCDS 289
           SSCGS  G  +T   +GG +RC +  A    VLVLPCRHLCLCT+CGS+  L TCPVCD 
Sbjct: 241 SSCGSCDGGDVTAVVNGGCKRCGELTAS---VLVLPCRHLCLCTVCGSSALLRTCPVCDM 293

[Close]

BLAST of Carg21446 vs. Swiss-Prot
Match: sp|O81851|BOI_ARATH (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51
Identity = 138/310 (44.52%), Postives = 189/310 (60.97%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYKTMPVETAGLWPYVAGKS-----VP 60
           MAV+A  MN + S FI+ N D +K  QE ++   ++     T G  P + G+S     + 
Sbjct: 1   MAVQAHHMN-IFSQFISPNRDCVK-FQENMNHGEFEF----TGGEVPLITGESFAVEPLA 60

Query: 61  EIVNNFPADSGLTSNNFPAAPV-RKRQRRSGYEEPPCPFPCR----------LSDEEIIN 120
              N   A+SGL S NF   P+  KRQR   + +   P   R          L + E+++
Sbjct: 61  AKANFNKAESGL-SYNFTVPPLSTKRQRDFQFSDSNAPVKRRSVAFDSSSPSLINVELVS 120

Query: 121 SHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGK 180
               QQQSEIDRF+A   EK+R+ +E R++ ++ ML  A++  + KKLKEKD+EI R+  
Sbjct: 121 QIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEKDDEIVRIRN 180

Query: 181 LNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAAND----TAAAANDAES 240
           LNWVLQERVK L +ENQ+WRD+A+TNEA  N+LRTNL+++++        +A   +DAES
Sbjct: 181 LNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTASAVVEDDAES 240

Query: 241 SCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGST--LHTCPVCDSA 289
           SCGS  G G  E  +  G  C++C   E+ VLVLPCRHLCLCT+CG +  L TCPVCD  
Sbjct: 241 SCGSCCGDGGGEAVTAVGGGCKRCGEREASVLVLPCRHLCLCTVCGGSALLRTCPVCDMV 300

[Close]

BLAST of Carg21446 vs. Swiss-Prot
Match: sp|Q9LDD1|BRG3_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-41
Identity = 95/206 (46.12%), Postives = 140/206 (67.96%), Query Frame = 0


Query: 103 INSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERM 162
           ++S+VQQ   +IDR I+ H E++RM +E ++K +   +V A+E+ L+K L+ KD+EI  +
Sbjct: 130 LSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDEINHI 189

Query: 163 GKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAA-----NDTAAAAND 222
           GKLN  L+E+VK LC+ENQ+WRD+A++NEATVN+LR+NL+++++A       +    A+D
Sbjct: 190 GKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPTVADD 249

Query: 223 AESSCGSNSGCGITEEESG---------------GGRRCRKCMAGESRVLVLPCRHLCLC 282
           A+S CGSN   G +EEE                 G   CR C  GE+ VL+LPCRH+CLC
Sbjct: 250 AQSCCGSNDE-GDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCRHMCLC 309

Query: 283 TMCGSTLHTCPVCDSAINASVHVNFS 289
           ++CGS+L+TCP+C S   AS+HVN S
Sbjct: 310 SVCGSSLNTCPICKSPKTASLHVNLS 334

[Close]

BLAST of Carg21446 vs. Swiss-Prot
Match: sp|F4IDI6|BRG2_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 3.7e-37
Identity = 93/213 (43.66%), Postives = 128/213 (60.09%), Query Frame = 0


Query: 103 INSHVQQQQSEIDRFIAIH---REKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEI 162
           I+SH+ QQQ EIDRF+++H    E+V+  +E ++KR++  ++ AIE+ LVK+L+ K+EE 
Sbjct: 145 ISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEER 204

Query: 163 ERMGKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAANDTAAAANDAE 222
           ER+GK+N  L+ERVK L +ENQ+WRDLA+TNEAT N LRTNLE +++   D +  A   +
Sbjct: 205 ERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLEK 264

Query: 223 S------------------------SCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLP 282
           +                                            CR C   ES VL+LP
Sbjct: 265 NMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRNCGEEESCVLLLP 324

Query: 283 CRHLCLCTMCGSTLHTCPVCDSAINASVHVNFS 289
           CRHLCLC +CGS++HTCP+C S  NASVHVN S
Sbjct: 325 CRHLCLCGVCGSSVHTCPICTSPKNASVHVNMS 357

[Close]

BLAST of Carg21446 vs. Swiss-Prot
Match: sp|O60291|MGRN1_HUMAN (E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens OX=9606 GN=MGRN1 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 4.2e-04
Identity = 22/58 (37.93%), Postives = 30/58 (51.72%), Query Frame = 0


Query: 232 EEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTL----HTCPVCDSAINASVHV 286
           +E S     C  C++     L+LPCRHLCLCT C  TL    + CP+C     A + +
Sbjct: 269 DENSDNSNECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQI 326

[Close]

BLAST of Carg21446 vs. TrEMBL
Match: tr|A0A1S3C8U5|A0A1S3C8U5_CUCME (E3 ubiquitin-protein ligase BOI-like OS=Cucumis melo OX=3656 GN=LOC103498284 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.1e-84
Identity = 198/317 (62.46%), Postives = 220/317 (69.40%), Query Frame = 0


Query: 1   MAVEARRMNHLPSP--FITNNGDFMKQSQEVLDIYNYKTMPVETAG-LWPYVAGKS--VP 60
           MAVEAR MN LPS    I NN DF+KQ+QE+   +   T    T G +WPY A K    P
Sbjct: 1   MAVEARPMNLLPSHQFIIPNNRDFIKQNQELASTHMTPTTDTTTPGIIWPYTAVKPAVTP 60

Query: 61  E-IVNNF--------PADSGLTSNNFPA-APVRKRQR-RSGYEEPPCPFPCRLSDEEIIN 120
           E  +NNF         A+SGLTSNNFP+ AP RKR R RS Y+EP      RL DEEIIN
Sbjct: 61  EATLNNFATTMYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEP----GGRLLDEEIIN 120

Query: 121 SHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGK 180
           SH+QQQQSE+DRFIAIHREK+R+ MEIRKKRESGMLVRAIEER+VKKLKEK+EEIERMGK
Sbjct: 121 SHIQQQQSEMDRFIAIHREKMRIEMEIRKKRESGMLVRAIEERVVKKLKEKEEEIERMGK 180

Query: 181 LNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLI-SAANDTAAAANDA----- 240
           LNWVLQERVKRLCMENQ+WRDLAE+NEATVN LR NLE++I  AAN        A     
Sbjct: 181 LNWVLQERVKRLCMENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVAGAXXXXX 240

Query: 241 -------ESSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHT 289
                                        CRKC AGESRVLVLPCRHLCLCTMCGST+H+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKCGAGESRVLVLPCRHLCLCTMCGSTIHS 300

[Close]

BLAST of Carg21446 vs. TrEMBL
Match: tr|A0A0A0M3V5|A0A0A0M3V5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G707120 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.7e-82
Identity = 194/317 (61.20%), Postives = 220/317 (69.40%), Query Frame = 0


Query: 1   MAVEARRMNHLPSP--FITNNGDFMKQSQEVLDIYNYKTMPVETAG-LWPYVAGKS--VP 60
           MAVEAR MN LPS    I N+ DF+KQ+QE+ + +        T G +WPY A K    P
Sbjct: 1   MAVEARPMNLLPSHQFIIPNDRDFIKQNQELANTHMTPVTDTTTPGIIWPYTAVKPAVTP 60

Query: 61  E-IVNNF-------PADSGLTSNNFPA-APVRKRQR-RSGYEEPPCPFPCRLSDEEIINS 120
           E  +NNF        A+SGLTSNNFP+ AP RKR R RS Y+EP      RL DEEIINS
Sbjct: 61  ETTLNNFATVYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEP----GGRLLDEEIINS 120

Query: 121 HVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIERMGKL 180
           H+QQQQSE+DRFIAIHREK+R+ ME+RKKRESGMLVRAIEER+VKKLKEK+EEIERMGKL
Sbjct: 121 HIQQQQSEMDRFIAIHREKMRIEMEMRKKRESGMLVRAIEERVVKKLKEKEEEIERMGKL 180

Query: 181 NWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLI-SAANDTAAAANDA------ 240
           NWVLQERVKRLC+ENQ+WRDLAE+NEATVN LR NLE++I  AAN        A      
Sbjct: 181 NWVLQERVKRLCVENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVAGAXXXXXX 240

Query: 241 -------ESSCGSNSGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHT 289
                                        CRKC AGESRVLVLPCRHLCLCTMCGST+H+
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKCGAGESRVLVLPCRHLCLCTMCGSTIHS 300

[Close]

BLAST of Carg21446 vs. TrEMBL
Match: tr|A0A061GKA6|A0A061GKA6_THECC (SBP family protein, putative isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_029357 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.0e-65
Identity = 170/331 (51.36%), Postives = 213/331 (64.35%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYK---TMPV-----ETAGLWPYVAG- 60
           MAVEAR MN  P   ITN+ DF+K +Q   +IYN +    +P+     E + L+P     
Sbjct: 1   MAVEARHMNLFPPQLITNSSDFIKTNQGSGNIYNTQMDSCVPLVDAMQEASQLFPLYQSL 60

Query: 61  ----KSVPEIVNNFPADSGLTSNNFPAAPVRKRQRRS---GYEEPPCPFPCRLS------ 120
                S    +N   ADSGLT  N P +  RKR R S   G++  P     ++S      
Sbjct: 61  VCDPTSAKTSINK--ADSGLT-YNIPVSAPRKRPRDSFINGFDSYPVSQKNKISGVSSVL 120

Query: 121 DEEIINSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEE 180
           D++I+ S +QQQQ EIDRFIA H EKVR+ +E R+KR+S ML+ AI+E ++KKLKEKDEE
Sbjct: 121 DDDIL-SQIQQQQQEIDRFIAEHTEKVRLELEERRKRQSRMLITAIQEGVMKKLKEKDEE 180

Query: 181 IERMGKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAAND-------T 240
           I+RMGKLNWVLQERVK L +ENQLWRDLA+TNEAT NSLRTNLE++++  ++        
Sbjct: 181 IQRMGKLNWVLQERVKSLYVENQLWRDLAQTNEATANSLRTNLEQVLAHVSEERHVSGGA 240

Query: 241 AAAANDAESSCGSNS--------------GCGITEEE-SGGGRRCRKCMAGESRVLVLPC 287
           AA A+DAESSCGS+               G G+ ++   G  R+CRKC   ES VL+LPC
Sbjct: 241 AALADDAESSCGSSDEGWRKVVPPQPQGRGGGLQDKAVVGHNRKCRKCGEKESSVLLLPC 300

[Close]

BLAST of Carg21446 vs. TrEMBL
Match: tr|A0A061GDM4|A0A061GDM4_THECC (SBP family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029357 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 7.7e-64
Identity = 171/333 (51.35%), Postives = 214/333 (64.26%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLDIYNYK---TMPV-----ETAGLWPYVAG- 60
           MAVEAR MN  P   ITN+ DF+K +Q   +IYN +    +P+     E + L+P     
Sbjct: 1   MAVEARHMNLFPPQLITNS-DFIKTNQGSGNIYNTQMDSCVPLVDAMQEASQLFPLYQSL 60

Query: 61  ----KSVPEIVNNFPADSGLTSNNFPAAPVRKRQRRS---GYEEPPCPFPCRLS------ 120
                S    +N   ADSGLT  N P +  RKR R S   G++  P     ++S      
Sbjct: 61  VCDPTSAKTSINK--ADSGLT-YNIPVSAPRKRPRDSFINGFDSYPVSQKNKISGVSSVL 120

Query: 121 DEEIINSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEE 180
           D++I+ S +QQQQ EIDRFIA H EKVR+ +E R+KR+S ML+ AI+E ++KKLKEKDEE
Sbjct: 121 DDDIL-SQIQQQQQEIDRFIAEHTEKVRLELEERRKRQSRMLITAIQEGVMKKLKEKDEE 180

Query: 181 IERMGKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLISAAND-------T 240
           I+RMGKLNWVLQERVK L +ENQLWRDLA+TNEAT NSLRTNLE++++  ++        
Sbjct: 181 IQRMGKLNWVLQERVKSLYVENQLWRDLAQTNEATANSLRTNLEQVLAHVSEERHVSGGA 240

Query: 241 AAAANDAESSCGSNS--------------GCGITEEE-SGGGRRCRKCMAGESRVLVLPC 289
           AA A+DAESSCGS+               G G+ ++   G  R+CRKC   ES VL+LPC
Sbjct: 241 AALADDAESSCGSSDEGWRKVVPPQPQGRGGGLQDKAVVGHNRKCRKCGEKESSVLLLPC 300

[Close]

BLAST of Carg21446 vs. TrEMBL
Match: tr|V7BSH5|V7BSH5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G132000g PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 155/312 (49.68%), Postives = 196/312 (62.82%), Query Frame = 0


Query: 1   MAVEARRMNHLPSPFITNNGDFMKQSQEVLD-------IYNYK---TMPVETAGLWPYVA 60
           MAV+A  MN LPS  +TN  + +K +Q+          IYN +    +P+  A +   + 
Sbjct: 1   MAVDATYMNLLPSQLLTNR-EIIKSNQQQHHHQLNFDYIYNTQMDSPLPLPPAAMPESLL 60

Query: 61  GKSVPEIVNNFPADSGLTSNNFPAAPVRKRQRRSGYEE----PP------CPFPCRLSDE 120
                   +   ADSGLT N     P+++++ R    E    PP       P P  LS E
Sbjct: 61  SLYQSSFCDPNKADSGLTYN----LPLQRKRSRDFTSELTSLPPHHKNKISPQPSLLSQE 120

Query: 121 EIINSHVQQQQSEIDRFIAIHREKVRMAMEIRKKRESGMLVRAIEERLVKKLKEKDEEIE 180
             I    Q QQSEIDR +A H EKVRM +E +K R+S +L  AI+E + KKLKEKDEEI+
Sbjct: 121 --ILYQFQHQQSEIDRVLAQHTEKVRMELEGQKMRQSRILASAIQEAMAKKLKEKDEEIQ 180

Query: 181 RMGKLNWVLQERVKRLCMENQLWRDLAETNEATVNSLRTNLERLIS-AANDTAAAANDAE 240
           RMGKLNW LQERVK L +ENQ+WRDLA+TNE T N LRTNLE++++ A  + AA A+DA+
Sbjct: 181 RMGKLNWALQERVKNLSVENQIWRDLAQTNETTANYLRTNLEQVLAHAGEERAAVADDAQ 240

Query: 241 SSCGSN---SGCGITEEESGGGRRCRKCMAGESRVLVLPCRHLCLCTMCGSTLHTCPVCD 289
           SSCGSN    GC  T    GG R CR C A ES VL+LPCRHLCLCTMCGST+  CP+CD
Sbjct: 241 SSCGSNDAVEGCEDTAASGGGARLCRSCGARESVVLLLPCRHLCLCTMCGSTVRNCPICD 300

The following BLAST results are available for this feature:

BLAST of Carg21446 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927535.1	1.5e-159	100.00	BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita moschata]	[more]
XP_023519053.1	1.4e-157	98.96	BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001155.1	3.8e-139	89.04	BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita maxima]	[more]
XP_008459064.1	7.8e-84	62.46	PREDICTED: E3 ubiquitin-protein ligase BOI-like [Cucumis melo]	[more]
XP_004145480.2	5.6e-82	61.20	PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Cucumis sativus] >KGN...	[more]

BLAST of Carg21446 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45100.1	7.8e-54	45.02	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G19700.1	1.1e-52	44.52	SBP (S-ribonuclease binding protein) family protein	[more]
AT3G12920.1	1.1e-42	46.12	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G79110.1	2.1e-38	43.66	zinc ion binding	[more]
AT1G45976.1	6.7e-21	34.44	S-ribonuclease binding protein 1	[more]

BLAST of Carg21446 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FHE4\|BRG1_ARATH	1.4e-52	45.02	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
sp\|O81851\|BOI_ARATH	2.0e-51	44.52	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]
sp\|Q9LDD1\|BRG3_ARATH	1.9e-41	46.12	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
sp\|F4IDI6\|BRG2_ARATH	3.7e-37	43.66	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]
sp\|O60291\|MGRN1_HUMAN	4.2e-04	37.93	E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens OX=9606 GN=MGRN1 PE=1 SV=2	[more]

BLAST of Carg21446 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8U5\|A0A1S3C8U5_CUCME	5.1e-84	62.46	E3 ubiquitin-protein ligase BOI-like OS=Cucumis melo OX=3656 GN=LOC103498284 PE=...	[more]
tr\|A0A0A0M3V5\|A0A0A0M3V5_CUCSA	3.7e-82	61.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G707120 PE=4 SV=1	[more]
tr\|A0A061GKA6\|A0A061GKA6_THECC	7.0e-65	51.36	SBP family protein, putative isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=...	[more]
tr\|A0A061GDM4\|A0A061GDM4_THECC	7.7e-64	51.35	SBP family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029357 ...	[more]
tr\|V7BSH5\|V7BSH5_PHAVU	1.8e-60	49.68	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G132000g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR017066	E3ligase_BOI_like
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21446-RA	Carg21446-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 141..161
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 240..280 e-value: 2.3E-8 score: 33.7
None	No IPR available	PANTHER	PTHR42647	FAMILY NOT NAMED	coord: 1..288
None	No IPR available	PANTHER	PTHR42647:SF12	BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-RELATED	coord: 1..288
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 224..287 e-value: 6.2E-11 score: 43.6
IPR017066	E3 ubiquitin-protein ligase BOI-like	PIRSF	PIRSF036836	SBP1_RNase_bind	coord: 73..288 e-value: 5.4E-64 score: 214.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 241..276 score: 9.081

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21446	Cla000996	Watermelon (97103) v1	carwmB0397
Carg21446	Csa1G707120	Cucumber (Chinese Long) v2	carcuB0429
Carg21446	MELO3C021779	Melon (DHL92) v3.5.1	carmeB0400
Carg21446	ClCG01G009390	Watermelon (Charleston Gray)	carwcgB0392
Carg21446	CSPI01G34670	Wild cucumber (PI 183967)	carcpiB0433
Carg21446	Cucsa.236480	Cucumber (Gy14) v1	carcgyB0464
Carg21446	CmaCh18G005470	Cucurbita maxima (Rimu)	carcmaB0552
Carg21446	CmaCh13G004350	Cucurbita maxima (Rimu)	carcmaB0551
Carg21446	CmoCh18G005270	Cucurbita moschata (Rifu)	carcmoB0537
Carg21446	CmoCh13G004690	Cucurbita moschata (Rifu)	carcmoB0536
Carg21446	Lsi02G010280	Bottle gourd (USVL1VR-Ls)	carlsiB362
Carg21446	Cp4.1LG09g06910	Cucurbita pepo (Zucchini)	carcpeB0551
Carg21446	Cp4.1LG20g06100	Cucurbita pepo (Zucchini)	carcpeB0553
Carg21446	CsGy1G033130	Cucumber (Gy14) v2	carcgybB0406
Carg21446	MELO3C021779.2	Melon (DHL92) v3.6.1	carmedB0404
Carg21446	CsaV3_1G046530	Cucumber (Chinese Long) v3	carcucB0431
Carg21446	Cla97C01G009450	Watermelon (97103) v2	carwmbB0421
Carg21446	Bhi08G000762	Wax gourd	carwgoB0484

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21446	Carg25414	Silver-seed gourd	carcarB420

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21446	Cucumber (Gy14) v2	carcgybB0403
Carg21446	Cucumber (Gy14) v1	carcgyB0465
Carg21446	Cucurbita maxima (Rimu)	carcmaB0553
Carg21446	Wild cucumber (PI 183967)	carcpiB0431
Carg21446	Cucumber (Chinese Long) v2	carcuB0427
Carg21446	Cucumber (Chinese Long) v3	carcucB0429
Carg21446	Watermelon (Charleston Gray)	carwcgB0390