CsGy1G033130 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAGAACCCATGTGATTTTCCTAATTGGTTAAAAAAAAGATATAAATATTTTATTATATTTATTTGTAAATTCATTTGACTTTCTCTCTCTCTCTCTTAAAATCCCAAAACAAACCCAATGGATTTAAATTAAAAACCCCAATCTTCTCCTTCCTTGTCGCCACCTCTATTTCATGCTCTTTATTTATATTTATATTTTTTATATATATACATATTTCTCTCTATTAAGCAAGAAATTGTTGAGAAGATATCTCTAAGTCACAAGAAAAGCAAAGAAGAAACGAAACCAACTCAACAAGAAAATTTTCATGGCAGTTGAAGCACGGCCTATGAATCTTCTACCTTCTCATCAGTTCATCATCCCCAACGACAGGTCCATAATCTCAATCCATATATTTATGTATCTATATCTTCCTTTTCATTTTCTTTTTCTTTTTCAATGCTTTCCTCTAACACACACAACTCTCTCTTATTTTCTCAGAGATTTCATCAAACAGAATCAAGAATTAGCAAACACCCACATGACACCTGTCACGGACACCACCACCCCAGGGATAATATGGCCTTACACGGCCGTCAAACCAGCGGTTACACCGGAGACGACCCTCAATAATTTCGCCACTGTGTACGATTGGGGAAAAGCAGAGAGTGGACTTACATCCAATAACTTCCCATCAACCGCTCCCACCCGAAAGCGAACGAGATCGCGATCCTTTTACGATGAACCCGGGGGGAGGTTGTTGGATGAAGAAATCATAAACTCCCACATTCAGCAACAACAGAGTGAAATGGATCGGTTCATTGCAATCCATGTAAGTCCCAGATTTTTTTTTTTAATTAACTTCTGAGAGTGGGTTTAAAATGAAACGATGTAGACTAGTTGATGAAACTGACATCGGTTTTAAATTACAGAGAGAGAAGATGAGGATTGAAATGGAGATGCGGAAGAAGAGGGAATCGGGGATGTTGGTAAGGGCAATAGAGGAAAGAGTGGTAAAGAAGTTGAAGGAAAAAGAAGAAGAAATAGAAAGAATGGGGAAATTGAATTGGGTGTTGCAAGAGAGAGTGAAACGGCTGTGTGTGGAGAATCAAGTATGGAGGGATTTGGCAGAGAGCAATGAAGCGACGGTGAATTGTTTAAGGAATAATTTGGAGCAGGTGATATTAATGGCGGCAAATAAGAACGTGGGAGGTGTGGCGGGGGCGAAGGAGAAGGAGGAGAAGGCGGAGTCAAGCTGTGGGAGTACAAGTGAGTGTGGAAGGAAGGAGGAGGAGGAGGAGGAGGCGGAGAGTGGTGGTGGAGGAGGGCGGTGCCGGAAGTGTGGGGCGGGGGAATCGAGGGTGTTGGTGTTGCCATGCAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACAATTCACAGTTGCCCAGTATGTAATTCTGCCATTAATGCCAGCGTCCATGTTAATTTTTCTTGAATTCATACCCAACAACACAAACAAACAAACATAATTCTTTTCTTTTTTTGGTACATAAAAATTTATTCTCTCTCTCTTTTTTAACTTCTCATTCTTCCCATTCTTTTCTTTCTTTTTATTTATTATTACTCTCAATTTTTAATTACTTTTATTGTTGATCATAGGTAATTTAAAATTTAAAATTAATTAGCAAAATTAAGTTATGACTAAGATTAAAAAAAATAATAAAAAGAGAGAAAGTAGACCCAATGAAATAGTTGAAATTAATTGTTAATATTAGGTGATCATTTATATTTTATGAAATCTTTATTGGATATATACAAAGGGGAATAATATAATTTTGAATGGATGGACATAAAAATATACGTAGAATATTTAAAAATCATATGTATTTTGTGAGGATTGGAATAAGAAAGAGAGAAGTTTAAATAAGGTTATGGGTGAATGAAGGGATTTTGAAAGGTAGATAGAAGTAGTGGTGGAGTTAGTAAAATTATGGTGGGGGAATGGTATAATTATTCAAATGCGGGTATGGTACATAATATATACATTTAAATAATAATAAGTAAAAAAAAAAAAAGAGGGAGGGCTACGTGGGAGTTCACACGTAGGAGATGGGGTCTGACAGGGAGGAGTGGGGGCCGCCATGTGTGAAGAAAGTGAAGAAAGTGAAGAAAAAATTGAGAGAGTAATTATTATTGTTGTTGTTGGAAAGTTGGATTTTGAGTTTGCATAAAAAAAGAATGGGGGGCATGCTATTTGCTGACACCCTATGGCCAATTCAACCTTATACTAATGCTAATAGTAACTAATTATTAACCCCATCTCTTCCACCTATCTCTTCAATCTATGTAAACAAACTTATCAAAGTTTAATTTAATTAAATACTTTTTTTGTTACTTGTTGTTTATATGTTTATCATAAAAATAATCTTCCATTCACCCTTTCCTTCACTATTTTTTCTTACTTTCATTCTTATCTCTAAAATTTATATTTATTCGGCTGGTATGAAAATAAATATGGATTTTAAAAATTAGAATATAAAAAGGAAAAGGAAAAAGAAAAATAAAAGAGAAAACATGTAGTAAAAATGTACTGCAAAAATCTGTAGCACCTTGTCGGCTAAAACTTTGGAGGGTGCAGTGCCGACAACAGACTATTTTTTTTTTTTAATTTTATCATCC CCAGAACCCATGTGATTTTCCTAATTGGTTAAAAAAAAGATATAAATATTTTATTATATTTATTTGTAAATTCATTTGACTTTCTCTCTCTCTCTCTTAAAATCCCAAAACAAACCCAATGGATTTAAATTAAAAACCCCAATCTTCTCCTTCCTTGTCGCCACCTCTATTTCATGCTCTTTATTTATATTTATATTTTTTATATATATACATATTTCTCTCTATTAAGCAAGAAATTGTTGAGAAGATATCTCTAAGTCACAAGAAAAGCAAAGAAGAAACGAAACCAACTCAACAAGAAAATTTTCATGGCAGTTGAAGCACGGCCTATGAATCTTCTACCTTCTCATCAGTTCATCATCCCCAACGACAGAGATTTCATCAAACAGAATCAAGAATTAGCAAACACCCACATGACACCTGTCACGGACACCACCACCCCAGGGATAATATGGCCTTACACGGCCGTCAAACCAGCGGTTACACCGGAGACGACCCTCAATAATTTCGCCACTGTGTACGATTGGGGAAAAGCAGAGAGTGGACTTACATCCAATAACTTCCCATCAACCGCTCCCACCCGAAAGCGAACGAGATCGCGATCCTTTTACGATGAACCCGGGGGGAGGTTGTTGGATGAAGAAATCATAAACTCCCACATTCAGCAACAACAGAGTGAAATGGATCGGTTCATTGCAATCCATAGAGAGAAGATGAGGATTGAAATGGAGATGCGGAAGAAGAGGGAATCGGGGATGTTGGTAAGGGCAATAGAGGAAAGAGTGGTAAAGAAGTTGAAGGAAAAAGAAGAAGAAATAGAAAGAATGGGGAAATTGAATTGGGTGTTGCAAGAGAGAGTGAAACGGCTGTGTGTGGAGAATCAAGTATGGAGGGATTTGGCAGAGAGCAATGAAGCGACGGTGAATTGTTTAAGGAATAATTTGGAGCAGGTGATATTAATGGCGGCAAATAAGAACGTGGGAGGTGTGGCGGGGGCGAAGGAGAAGGAGGAGAAGGCGGAGTCAAGCTGTGGGAGTACAAGTGAGTGTGGAAGGAAGGAGGAGGAGGAGGAGGAGGCGGAGAGTGGTGGTGGAGGAGGGCGGTGCCGGAAGTGTGGGGCGGGGGAATCGAGGGTGTTGGTGTTGCCATGCAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACAATTCACAGTTGCCCAGTATGTAATTCTGCCATTAATGCCAGCGTCCATGTTAATTTTTCTTGAATTCATACCCAACAACACAAACAAACAAACATAATTCTTTTCTTTTTTTGGTACATAAAAATTTATTCTCTCTCTCTTTTTTAACTTCTCATTCTTCCCATTCTTTTCTTTCTTTTTATTTATTATTACTCTCAATTTTTAATTACTTTTATTGTTGATCATAGGTAATTTAAAATTTAAAATTAATTAGCAAAATTAAGTTATGACTAAGATTAAAAAAAATAATAAAAAGAGAGAAAGTAGACCCAATGAAATAGTTGAAATTAATTGTTAATATTAGGTGATCATTTATATTTTATGAAATCTTTATTGGATATATACAAAGGGGAATAATATAATTTTGAATGGATGGACATAAAAATATACGTAGAATATTTAAAAATCATATGTATTTTGTGAGGATTGGAATAAGAAAGAGAGAAGTTTAAATAAGGTTATGGGTGAATGAAGGGATTTTGAAAGGTAGATAGAAGTAGTGGTGGAGTTAGTAAAATTATGGTGGGGGAATGGTATAATTATTCAAATGCGGGTATGGTACATAATATATACATTTAAATAATAATAAGTAAAAAAAAAAAAAGAGGGAGGGCTACGTGGGAGTTCACACGTAGGAGATGGGGTCTGACAGGGAGGAGTGGGGGCCGCCATGTGTGAAGAAAGTGAAGAAAGTGAAGAAAAAATTGAGAGAGTAATTATTATTGTTGTTGTTGGAAAGTTGGATTTTGAGTTTGCATAAAAAAAGAATGGGGGGCATGCTATTTGCTGACACCCTATGGCCAATTCAACCTTATACTAATGCTAATAGTAACTAATTATTAACCCCATCTCTTCCACCTATCTCTTCAATCTATGTAAACAAACTTATCAAAGTTTAATTTAATTAAATACTTTTTTTGTTACTTGTTGTTTATATGTTTATCATAAAAATAATCTTCCATTCACCCTTTCCTTCACTATTTTTTCTTACTTTCATTCTTATCTCTAAAATTTATATTTATTCGGCTGGTATGAAAATAAATATGGATTTTAAAAATTAGAATATAAAAAGGAAAAGGAAAAAGAAAAATAAAAGAGAAAACATGTAGTAAAAATGTACTGCAAAAATCTGTAGCACCTTGTCGGCTAAAACTTTGGAGGGTGCAGTGCCGACAACAGACTATTTTTTTTTTTTAATTTTATCATCC ATGGCAGTTGAAGCACGGCCTATGAATCTTCTACCTTCTCATCAGTTCATCATCCCCAACGACAGAGATTTCATCAAACAGAATCAAGAATTAGCAAACACCCACATGACACCTGTCACGGACACCACCACCCCAGGGATAATATGGCCTTACACGGCCGTCAAACCAGCGGTTACACCGGAGACGACCCTCAATAATTTCGCCACTGTGTACGATTGGGGAAAAGCAGAGAGTGGACTTACATCCAATAACTTCCCATCAACCGCTCCCACCCGAAAGCGAACGAGATCGCGATCCTTTTACGATGAACCCGGGGGGAGGTTGTTGGATGAAGAAATCATAAACTCCCACATTCAGCAACAACAGAGTGAAATGGATCGGTTCATTGCAATCCATAGAGAGAAGATGAGGATTGAAATGGAGATGCGGAAGAAGAGGGAATCGGGGATGTTGGTAAGGGCAATAGAGGAAAGAGTGGTAAAGAAGTTGAAGGAAAAAGAAGAAGAAATAGAAAGAATGGGGAAATTGAATTGGGTGTTGCAAGAGAGAGTGAAACGGCTGTGTGTGGAGAATCAAGTATGGAGGGATTTGGCAGAGAGCAATGAAGCGACGGTGAATTGTTTAAGGAATAATTTGGAGCAGGTGATATTAATGGCGGCAAATAAGAACGTGGGAGGTGTGGCGGGGGCGAAGGAGAAGGAGGAGAAGGCGGAGTCAAGCTGTGGGAGTACAAGTGAGTGTGGAAGGAAGGAGGAGGAGGAGGAGGAGGCGGAGAGTGGTGGTGGAGGAGGGCGGTGCCGGAAGTGTGGGGCGGGGGAATCGAGGGTGTTGGTGTTGCCATGCAGGCATCTTTGTTTGTGTACAATGTGTGGGTCCACAATTCACAGTTGCCCAGTATGTAATTCTGCCATTAATGCCAGCGTCCATGTTAATTTTTCTTGA MAVEARPMNLLPSHQFIIPNDRDFIKQNQELANTHMTPVTDTTTPGIIWPYTAVKPAVTPETTLNNFATVYDWGKAESGLTSNNFPSTAPTRKRTRSRSFYDEPGGRLLDEEIINSHIQQQQSEMDRFIAIHREKMRIEMEMRKKRESGMLVRAIEERVVKKLKEKEEEIERMGKLNWVLQERVKRLCVENQVWRDLAESNEATVNCLRNNLEQVILMAANKNVGGVAGAKEKEEKAESSCGSTSECGRKEEEEEEAESGGGGGRCRKCGAGESRVLVLPCRHLCLCTMCGSTIHSCPVCNSAINASVHVNFS
BLAST of CsGy1G033130 vs. NCBI nr
Match: XP_004145480.2 (PREDICTED: BOI-related E3 ubiquitin-protein ligase 1-like [Cucumis sativus] >KGN66896.1 hypothetical protein Csa_1G707120 [Cucumis sativus]) HSP 1 Score: 537.0 bits (1382), Expect = 4.4e-149 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of CsGy1G033130 vs. NCBI nr
Match: XP_008459064.1 (PREDICTED: E3 ubiquitin-protein ligase BOI-like [Cucumis melo]) HSP 1 Score: 516.9 bits (1330), Expect = 4.7e-143 Identity = 305/314 (97.13%), Postives = 310/314 (98.73%), Query Frame = 0
BLAST of CsGy1G033130 vs. NCBI nr
Match: XP_022927535.1 (BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita moschata]) HSP 1 Score: 313.9 bits (803), Expect = 6.1e-82 Identity = 194/317 (61.20%), Postives = 220/317 (69.40%), Query Frame = 0
BLAST of CsGy1G033130 vs. NCBI nr
Match: XP_023519053.1 (BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 311.2 bits (796), Expect = 3.9e-81 Identity = 194/317 (61.20%), Postives = 219/317 (69.09%), Query Frame = 0
BLAST of CsGy1G033130 vs. NCBI nr
Match: XP_023001155.1 (BOI-related E3 ubiquitin-protein ligase 1-like [Cucurbita maxima]) HSP 1 Score: 310.1 bits (793), Expect = 8.7e-81 Identity = 218/317 (68.77%), Postives = 245/317 (77.29%), Query Frame = 0
BLAST of CsGy1G033130 vs. TAIR10
Match: AT4G19700.1 (SBP (S-ribonuclease binding protein) family protein) HSP 1 Score: 177.6 bits (449), Expect = 1.2e-44 Identity = 131/328 (39.94%), Postives = 173/328 (52.74%), Query Frame = 0
BLAST of CsGy1G033130 vs. TAIR10
Match: AT5G45100.1 (SBP (S-ribonuclease binding protein) family protein) HSP 1 Score: 174.9 bits (442), Expect = 8.0e-44 Identity = 127/322 (39.44%), Postives = 173/322 (53.73%), Query Frame = 0
BLAST of CsGy1G033130 vs. TAIR10
Match: AT1G79110.1 (zinc ion binding) HSP 1 Score: 160.6 bits (405), Expect = 1.6e-39 Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 0
BLAST of CsGy1G033130 vs. TAIR10
Match: AT3G12920.1 (SBP (S-ribonuclease binding protein) family protein) HSP 1 Score: 153.3 bits (386), Expect = 2.5e-37 Identity = 95/259 (36.68%), Postives = 143/259 (55.21%), Query Frame = 0
BLAST of CsGy1G033130 vs. TAIR10
Match: AT1G32740.1 (SBP (S-ribonuclease binding protein) family protein) HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18 Identity = 63/204 (30.88%), Postives = 99/204 (48.53%), Query Frame = 0
BLAST of CsGy1G033130 vs. Swiss-Prot
Match: sp|O81851|BOI_ARATH (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 2.2e-43 Identity = 131/328 (39.94%), Postives = 173/328 (52.74%), Query Frame = 0
BLAST of CsGy1G033130 vs. Swiss-Prot
Match: sp|Q9FHE4|BRG1_ARATH (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42 Identity = 127/322 (39.44%), Postives = 173/322 (53.73%), Query Frame = 0
BLAST of CsGy1G033130 vs. Swiss-Prot
Match: sp|F4IDI6|BRG2_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.8e-38 Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 0
BLAST of CsGy1G033130 vs. Swiss-Prot
Match: sp|Q9LDD1|BRG3_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 4.5e-36 Identity = 95/259 (36.68%), Postives = 143/259 (55.21%), Query Frame = 0
BLAST of CsGy1G033130 vs. TrEMBL
Match: tr|A0A0A0M3V5|A0A0A0M3V5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G707120 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 2.9e-149 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of CsGy1G033130 vs. TrEMBL
Match: tr|A0A1S3C8U5|A0A1S3C8U5_CUCME (E3 ubiquitin-protein ligase BOI-like OS=Cucumis melo OX=3656 GN=LOC103498284 PE=4 SV=1) HSP 1 Score: 516.9 bits (1330), Expect = 3.1e-143 Identity = 305/314 (97.13%), Postives = 310/314 (98.73%), Query Frame = 0
BLAST of CsGy1G033130 vs. TrEMBL
Match: tr|A0A061GKA6|A0A061GKA6_THECC (SBP family protein, putative isoform 2 (Fragment) OS=Theobroma cacao OX=3641 GN=TCM_029357 PE=4 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54 Identity = 158/342 (46.20%), Postives = 200/342 (58.48%), Query Frame = 0
BLAST of CsGy1G033130 vs. TrEMBL
Match: tr|A0A061GDM4|A0A061GDM4_THECC (SBP family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029357 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.8e-53 Identity = 159/344 (46.22%), Postives = 201/344 (58.43%), Query Frame = 0
BLAST of CsGy1G033130 vs. TrEMBL
Match: tr|M5WG53|M5WG53_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G108500 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 8.7e-53 Identity = 182/338 (53.85%), Postives = 222/338 (65.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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