Lsi02G007460 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G007460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein, putative
Locationchr02 : 6851037 .. 6853732 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGCTGCAACCAGGGCTCACTGTCATTCAATACTTGGGCAGCGCCTAGTTTCTCCATTTTTTTTTTCTATTGGCTTTCGAAATGAAGCTCTTACAATCTGGAAAACCAATGCATTTGATTGCATTCCGGAGAAATTTGGTGTATTTCTACTCTACGATTGCGAAGGATTCACTTTACAAAAGGATTTCACCGGTGGGTGACCCTAATATCTCTGTAATTCCAGTTCTTGATCAGTGGGTGCTAGAAGGCAGGCCTGTTCAGAGAGAAGAACTTCAGAAGATCGTCAAGGAACTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGGTTTGATTTCTCAGTATTAATTTATGCATTGCTTCGTGAAAGTATGATGGGTTTGCCATTATGTGAGATGATTTCGTTGATTGAAGCAAATGGGTCCAAAGCAAACGATTTGCCATTGTTGAATTTTTAAGATGAATAATGAGTTCATCTCTTTTCCAGCATGGTTTCTCCTTTGAACTTGTTAAGCTACCAGGGTTTCATTTGCTCTAACTAATGAAGCAATGGAATTAGGTTGCCGTGAAACAACTCTAGACTCTTGAGGGAGAAGATCTTATTTTCTATTACCTCGTAGATTGCAAGCAATACTTGATTTGAGCTCAAATTCATGTCTGATAGCTTTCTTTTGCCATTGATAGTTGCTTTGCCGTTCTGCCAATGCTTTGTTTTTGCTGCAGAGTTCACTTTCTTGCACCTATTTTGTTTGCCCTCTCAATTCTCTCTATCTAATTTGTTAGCTCTGCCTCTGCTGAAAAGTTTTAACTTGCAAGAATAATAAATAAATTGGAAAGTGATTTGCTTAACATGTTCTTTCTGACATATCAAGGAAGCCACATTGTGGGGAATTCTTAGCTTATTGATTTCATGTTGAATTGAATTATTCCTATATTTTACACGGTATTCTGGTTCTGACCCATCTCTTGAAACCCCCTTCATCTTCAGATATCAAAATGGATGAGTGATAAAAGATACCTTCCTTTATCGACTGTCGATATCGCGACGCGGATGAATTTGATCTTAAAAGTTCATGGGTTGGAACAAGTAGAAGATTATTTCAATAGCATTCCTAGTCAATTGAAAAAGTTTCAGGTTCATATTGCTCTTCTGAACTGCTATGCCCATGAAAAGTGTGTGGACAAAGCCAATGCCATCCTGCAAAAGATCAAGGAAATGGGTTTTGATAGAACTCCCCTCTCATACAATATCATGATGAATCTTTATTATCAAATTGGAGAATTTGAGAAACTAGATCCTCTTTTGCAAGAAATGAAAGAAAAGGGTGTTTCTTACGATCGATTCACATATAGCATCCAACTAAGTGCATATGCTGCTGCATCTGATATTATGAGAGTCGATAAGATTGTGGAACAAATGGAATCAGATACCAATATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGGTTACCTTAAAGTTGGTTTAATTGACAAATCGGTTTCCATACTGAGGAAATCAGAAGGTCTCCTAGCAACTGCCAAAAGGAGAGGTTATGCATTTGATATCCTCCTCAAACTGTATGCTAAAAGTGGAAAGAAAGACGAGGTACACCGTGTATGGAATCTCTACAAGAAGGAGAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTAGATGATATCAAAGGTGCGGAACGTATTTTCAAGGAGTGGGAGACTCGGAAACTGTCCTACGACTTGCGAATTCCAAACATGTTGGTTGACGCGTATTGTAGAGAAGGTTTATTGGAGAAGGCTGAAGACCTTATAAACAAGACAGTGATTGTAAGAGGCAAGTTTTCTATCGAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCGGAAAGATCAACTACCTCAGGCAGTTGATACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACCACTTCAAGGAAATTTTGGCAACATTTTTGGATGGCAAGCAAGATGTGAAAGAAGCTGACAAAGTCGTTAATCTGTTGAGGTCTGAAGCTAACTCTCTTTTTGCTCCTGATGTATTGATTGAGTGTGATGACTGAATGTGCATAATTTAACTTGTTACTTTTATTATAAAAGAACAGTGAAGGTCTGTTTAATAATTATTGTGTTTCTTAAAAAAAAATGGAAAAAAAAAAAAATCAGTTGTAAAGTTTGGAGAGTTATGAACCATGGAGTCCACAATGTATGTAATTAATAAAACATAAAATTGATATTTTTTAGTTGTGAGAACTGCAAATTTCTTGGACAAACTAGAAGTGGAGTCTACAACTCTATTCTTAATATGAAAACCTTAGCTATTTATAAATTAAGAACCATTTAGTTGAGCACTTAATAACAAATTCTAGAACCCAAAATCAATTTGACGTTAATCCAAAGGGAAGTATCATATTTGGATTAACTTTTGATCAAGAACCAAGAAATATGGAAATTGATTTCTCACTCTAAGTTCGAATATTCTACAAACAAGTTGATCAGACTTACCTGAATGCAACCCTTGCTCAAGAATTGAAAGTGATGATGAAACTCTATCATCTACTAGAGAATTTCATTTTTAAAAAAACCAAAAACTCAAAACTAACCTTACAATGTTCCTCTTCAAACCCTTAAAGCCTATCATGCTTAGCC

mRNA sequence

TTAGCTGCAACCAGGGCTCACTGTCATTCAATACTTGGGCAGCGCCTAGTTTCTCCATTTTTTTTTTCTATTGGCTTTCGAAATGAAGCTCTTACAATCTGGAAAACCAATGCATTTGATTGCATTCCGGAGAAATTTGGTGTATTTCTACTCTACGATTGCGAAGGATTCACTTTACAAAAGGATTTCACCGGTGGGTGACCCTAATATCTCTGTAATTCCAGTTCTTGATCAGTGGGTGCTAGAAGGCAGGCCTGTTCAGAGAGAAGAACTTCAGAAGATCGTCAAGGAACTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCAAAATGGATGAGTGATAAAAGATACCTTCCTTTATCGACTGTCGATATCGCGACGCGGATGAATTTGATCTTAAAAGTTCATGGGTTGGAACAAGTAGAAGATTATTTCAATAGCATTCCTAGTCAATTGAAAAAGTTTCAGGTTCATATTGCTCTTCTGAACTGCTATGCCCATGAAAAGTGTGTGGACAAAGCCAATGCCATCCTGCAAAAGATCAAGGAAATGGGTTTTGATAGAACTCCCCTCTCATACAATATCATGATGAATCTTTATTATCAAATTGGAGAATTTGAGAAACTAGATCCTCTTTTGCAAGAAATGAAAGAAAAGGGTGTTTCTTACGATCGATTCACATATAGCATCCAACTAAGTGCATATGCTGCTGCATCTGATATTATGAGAGTCGATAAGATTGTGGAACAAATGGAATCAGATACCAATATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGGTTACCTTAAAGTTGGTTTAATTGACAAATCGGTTTCCATACTGAGGAAATCAGAAGGTCTCCTAGCAACTGCCAAAAGGAGAGGTTATGCATTTGATATCCTCCTCAAACTGTATGCTAAAAGTGGAAAGAAAGACGAGGTACACCGTGTATGGAATCTCTACAAGAAGGAGAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTAGATGATATCAAAGGTGCGGAACGTATTTTCAAGGAGTGGGAGACTCGGAAACTGTCCTACGACTTGCGAATTCCAAACATGTTGGTTGACGCGTATTGTAGAGAAGGTTTATTGGAGAAGGCTGAAGACCTTATAAACAAGACAGTGATTGTAAGAGGCAAGTTTTCTATCGAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCGGAAAGATCAACTACCTCAGGCAGTTGATACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACCACTTCAAGGAAATTTTGGCAACATTTTTGGATGGCAAGCAAGATGTGAAAGAAGCTGACAAAGTCGTTAATCTGTTGAGGTCTGAAGCTAACTCTCTTTTTGCTCCTGATGTATTGATTGAGTGTGATGACTGAATGTGCATAATTTAACTTGTTACTTTTATTATAAAAGAACAGTGAAGGTCTGTTTAATAATTATTGTGTTTCTTAAAAAAAAATGGAAAAAAAAAAAAATCAGTTGTAAAGTTTGGAGAGTTATGAACCATGGAGTCCACAATGTATGTAATTAATAAAACATAAAATTGATATTTTTTAGTTGTGAGAACTGCAAATTTCTTGGACAAACTAGAAGTGGAGTCTACAACTCTATTCTTAATATGAAAACCTTAGCTATTTATAAATTAAGAACCATTTAGTTGAGCACTTAATAACAAATTCTAGAACCCAAAATCAATTTGACGTTAATCCAAAGGGAAGTATCATATTTGGATTAACTTTTGATCAAGAACCAAGAAATATGGAAATTGATTTCTCACTCTAAGTTCGAATATTCTACAAACAAGTTGATCAGACTTACCTGAATGCAACCCTTGCTCAAGAATTGAAAGTGATGATGAAACTCTATCATCTACTAGAGAATTTCATTTTTAAAAAAACCAAAAACTCAAAACTAACCTTACAATGTTCCTCTTCAAACCCTTAAAGCCTATCATGCTTAGCC

Coding sequence (CDS)

ATGAAGCTCTTACAATCTGGAAAACCAATGCATTTGATTGCATTCCGGAGAAATTTGGTGTATTTCTACTCTACGATTGCGAAGGATTCACTTTACAAAAGGATTTCACCGGTGGGTGACCCTAATATCTCTGTAATTCCAGTTCTTGATCAGTGGGTGCTAGAAGGCAGGCCTGTTCAGAGAGAAGAACTTCAGAAGATCGTCAAGGAACTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCAAAATGGATGAGTGATAAAAGATACCTTCCTTTATCGACTGTCGATATCGCGACGCGGATGAATTTGATCTTAAAAGTTCATGGGTTGGAACAAGTAGAAGATTATTTCAATAGCATTCCTAGTCAATTGAAAAAGTTTCAGGTTCATATTGCTCTTCTGAACTGCTATGCCCATGAAAAGTGTGTGGACAAAGCCAATGCCATCCTGCAAAAGATCAAGGAAATGGGTTTTGATAGAACTCCCCTCTCATACAATATCATGATGAATCTTTATTATCAAATTGGAGAATTTGAGAAACTAGATCCTCTTTTGCAAGAAATGAAAGAAAAGGGTGTTTCTTACGATCGATTCACATATAGCATCCAACTAAGTGCATATGCTGCTGCATCTGATATTATGAGAGTCGATAAGATTGTGGAACAAATGGAATCAGATACCAATATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGGTTACCTTAAAGTTGGTTTAATTGACAAATCGGTTTCCATACTGAGGAAATCAGAAGGTCTCCTAGCAACTGCCAAAAGGAGAGGTTATGCATTTGATATCCTCCTCAAACTGTATGCTAAAAGTGGAAAGAAAGACGAGGTACACCGTGTATGGAATCTCTACAAGAAGGAGAAAGTCTACAACAAAGGTTTCATCAGCATGATAAGATCACTTTTGATATTAGATGATATCAAAGGTGCGGAACGTATTTTCAAGGAGTGGGAGACTCGGAAACTGTCCTACGACTTGCGAATTCCAAACATGTTGGTTGACGCGTATTGTAGAGAAGGTTTATTGGAGAAGGCTGAAGACCTTATAAACAAGACAGTGATTGTAAGAGGCAAGTTTTCTATCGAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCGGAAAGATCAACTACCTCAGGCAGTTGATACACTGAAGAAAGCAGCCAGTTTGTGTCCATCAGAACTGAACCACTTCAAGGAAATTTTGGCAACATTTTTGGATGGCAAGCAAGATGTGAAAGAAGCTGACAAAGTCGTTAATCTGTTGAGGTCTGAAGCTAACTCTCTTTTTGCTCCTGATGTATTGATTGAGTGTGATGACTGA

Protein sequence

MKLLQSGKPMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKKEKVYNKGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILATFLDGKQDVKEADKVVNLLRSEANSLFAPDVLIECDD
Homology
[Close]
BLAST of Lsi02G007460 vs. Swiss-Prot
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 5.0e-89
Identity = 164/416 (39.42%), Postives = 278/416 (66.83%), Query Frame = 1 

Query: 29  DSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMS 88
           D+L +R++  GDP+ S+I VLD W+ +G  V+  EL  I+K LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVDK 148
           + R   +S  D+A R++LI KV GL + E +F +IP + + + ++ ALLNCYA +K + K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLS 208
           A  + Q++KE+GF +  L YN+M+NLY + G++  ++ LL+EM+++ V  D FT + +L 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 AYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLAT 268
           AY+  SD+  ++K + + E+D  + LDW  Y   ANGY+K GL +K++ +LRKSE ++  
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV-N 277

Query: 269 AKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK-EKVYNKGFISMIRSLLILDDIKGAER 328
           A++R +A+++L+  Y  +GKK+EV+R+W+LYK+ +  YN G+IS+I +LL +DDI+  E+
Sbjct: 278 AQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 329 IFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIE---SWCYLAS 388
           I +EWE     +D+RIP++L+  YC++G++EKAE+++N   I+  K+ +E   +W  LA 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVN---ILVQKWRVEDTSTWERLAL 397

Query: 389 GYLRKDQLPQAVDTLKKAASLCPSELNHFKEILAT---FLDGKQDVKEADKVVNLL 438
           GY    ++ +AV+  K+A  +        + +L +   +L+G++D++   K++ LL
Sbjct: 398 GYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

[Close]
BLAST of Lsi02G007460 vs. Swiss-Prot
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-71
Identity = 151/397 (38.04%), Postives = 240/397 (60.45%), Query Frame = 1 

Query: 9   PMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIV 68
           P +LIA R    Y+ + + K +LY +ISP+GDP  SV P L  WV  G+ V   EL +IV
Sbjct: 8   PANLIASR---YYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIV 67

Query: 69  KELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLK 128
            +LR  KRF HALE+SKWM++      S  + A  ++LI +V+G    E+YF ++  Q K
Sbjct: 68  HDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYK 127

Query: 129 KFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLL 188
             + + ALLNCY  ++ V+K+    +K+KEMGF  + L+YN +M LY  IG+ EK+  +L
Sbjct: 128 NDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVL 187

Query: 189 QEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLK 248
           +EMKE+ V+ D ++Y I ++A+ A  D+ R+   +  ME   +I +DWN Y +AA  Y+ 
Sbjct: 188 EEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYID 247

Query: 249 VGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK--EKVYN 308
            G  D++V +L+ SE  L   K+ G  ++ L+ LYA+ GKK EV R+W+L K   ++  N
Sbjct: 248 GGDCDRAVELLKMSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRIN 307

Query: 309 KGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINK 368
           + ++++++SL+ +D +  AE +  EW++    YD R+PN ++  Y  + + EKAE ++ +
Sbjct: 308 QDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAML-E 367

Query: 369 TVIVRGKFSI-ESWCYLASGYLRKDQLPQAVDTLKKA 403
            +  RGK +  ESW  +A+ Y  K  L  A   +K A
Sbjct: 368 DLARRGKATTPESWELVATAYAEKGTLENAFKCMKTA 398

[Close]
BLAST of Lsi02G007460 vs. Swiss-Prot
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 265.4 bits (677), Expect = 1.2e-69
Identity = 151/438 (34.47%), Postives = 250/438 (57.08%), Query Frame = 1 

Query: 20  VYFYSTIAKD--------SLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKEL 79
           VY Y T+  +        ++YK+IS +  P +    VL+QW   GR + + EL ++VKEL
Sbjct: 50  VYGYGTVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKEL 109

Query: 80  RVYKRFKHALEISKWMSDK-RYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKF 139
           R YKR   ALE+  WM+++     LS  D A +++LI KV G+   E++F  +P   K  
Sbjct: 110 RKYKRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDR 169

Query: 140 QVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQE 199
           +V+ +LLN Y   K  +KA A+L  +++ G+   PL +N+MM LY  + E++K+D ++ E
Sbjct: 170 RVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFE 229

Query: 200 MKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVG 259
           MK+K +  D ++Y+I LS+  +   + +++ + +QM+SD +I  +W  +   A  Y+K+G
Sbjct: 230 MKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMG 289

Query: 260 LIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK--EKVYNKG 319
             +K+   LRK E  +    R  Y +  LL LY   G K E++RVW++YK     + N G
Sbjct: 290 ETEKAEDALRKVEARITGRNRIPYHY--LLSLYGSLGNKKELYRVWHVYKSVVPSIPNLG 349

Query: 320 FISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTV 379
           + +++ SL+ + DI+GAE++++EW   K SYD RIPN+L++AY +   LE AE L +  V
Sbjct: 350 YHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMV 409

Query: 380 IVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILAT----FLDGK 439
            + GK S  +W  LA G+ RK  + +A+  L+ A S   S     K ++ +      + +
Sbjct: 410 EMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEE 469

Query: 440 QDVKEADKVVNLLRSEAN 443
            DV   + V+ LLR   +
Sbjct: 470 SDVTSKEAVLELLRQSGD 485

[Close]
BLAST of Lsi02G007460 vs. Swiss-Prot
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 230.3 bits (586), Expect = 4.1e-59
Identity = 132/339 (38.94%), Postives = 198/339 (58.41%), Query Frame = 1 

Query: 34  RISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMSDKRYL 93
           RI+     N  +IPVL+QW  +G  V    ++ I+K+LR   +   AL++S+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAH-EKCVDKANAI 153
            L   D A R++LI  V GLE+ E +F SIP   +   V+ +LLN YA  +K + KA A 
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 LQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAA 213
            QK++++G    P+ YN MM+LY  +   EK++ LL EMK+  V  D  T +  L  Y+A
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 ASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLATAKRR 273
             D+  ++K + + E    I L+W+  +  A  YL+     K++ +LR +E L+   K  
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLV-DQKSL 280

Query: 274 GYAFDILLKLYAKSGKKDEVHRVWNLYKKE--KVYNKGFISMIRSLLILDDIKGAERIFK 333
             A+D L+KLY ++G ++EV RVW LYK +  +  N G+ ++IRSLL +DDI GAE I+K
Sbjct: 281 KSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVI 370
            WE+  L +D RIP ML   Y   G+ EKAE L+N   I
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTI 378

[Close]
BLAST of Lsi02G007460 vs. Swiss-Prot
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN=At1g60770 PE=2 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-58
Identity = 129/427 (30.21%), Postives = 237/427 (55.50%), Query Frame = 1 

Query: 28  KDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWM 87
           ++ LY R+   G   + V   L+Q++   + V + E+   +K+LR    +  AL++S+ M
Sbjct: 22  EEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM 81

Query: 88  SDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVD 147
            ++R +  +  D A  ++L+ K   +   E+YF  +P   K    + +LLNCY  E   +
Sbjct: 82  -EERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTE 141

Query: 148 KANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQL 207
           KA  +L K+KE+    + +SYN +M LY + GE EK+  ++QE+K + V  D +TY++ +
Sbjct: 142 KAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWM 201

Query: 208 SAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLA 267
            A AA +DI  V++++E+M  D  +  DW  Y   A+ Y+  GL  K+   L++ E  + 
Sbjct: 202 RALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELE--MK 261

Query: 268 TAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK--EKVYNKGFISMIRSLLILDDIKGA 327
             +R   A+  L+ LY + GK  EV+R+W   +    K  N  +++MI+ L+ L+D+ GA
Sbjct: 262 NTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGA 321

Query: 328 ERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASG 387
           E +FKEW+    +YD+RI N+L+ AY +EGL++KA +L  K     GK + ++W      
Sbjct: 322 ETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDY 381

Query: 388 YLRKDQLPQAVDTLKKAASLCPSELNHF------KEILATFLDGKQDVKEADKVVNLLRS 447
           Y++   + +A++ + KA S+   +   +         L ++ + K+DV  A+ ++ +L++
Sbjct: 382 YVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKN 441

[Close]
BLAST of Lsi02G007460 vs. TrEMBL
Match: A0A0A0LV44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073790 PE=4 SV=1)

HSP 1 Score: 718.8 bits (1854), Expect = 4.3e-204
Identity = 345/443 (77.88%), Postives = 403/443 (90.97%), Query Frame = 1 

Query: 1   MKLLQSGKPMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQ 60
           MKLLQS KP++LIAFR   V FYST+ KD+LY+RISPVGDPNISV P+LDQWVLEGR VQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  REELQKIVKELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYF 120
           ++EL+ I+KELRVYKRFKHALEISKWMSDKRY PLST DIA RMNLIL+VHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGE 180
           +++PSQLK++QVHIALLNCYAHEKCVDKANA +QKIKEMGF  +PL YNIMMNLY+QIGE
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGE 180

Query: 181 FEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYV 240
           FE+LD LL+EMKE+GV YDRFTYSI++SAYAAASD   ++KI+EQMES+ +IVLDWNCYV
Sbjct: 181 FERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYV 240

Query: 241 IAANGYLKVGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYK 300
           IAAN Y KVGLIDKS+S+L+KSEGLLA  K++G+AF++ LKLYA++GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKVYNKGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKA 360
           KEK++NKGFISMI SL +LDDIKGAERI+KEWETRKLSYDLRIPN+LVDAYCR GL+EKA
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EDLINKTVIVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILATF 420
           E L+N+ VIVR KFS+ESWCYLASGYL+KDQLPQAV+TLK AAS+CPS LN+ KEILA F
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 LDGKQDVKEADKVVNLLRSEANS 444
           LDGKQDV+E +KVVNLLR + +S
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDS 443

[Close]
BLAST of Lsi02G007460 vs. TrEMBL
Match: W9RYV8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014527 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 1.7e-128
Identity = 225/436 (51.61%), Postives = 325/436 (74.54%), Query Frame = 1 

Query: 21  YFYSTIA-------KDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRV 80
           +FYS+I+       ++ LY+RISPVG+PN+SV+P+L+QWV EG+PV + ELQ+I+KELR+
Sbjct: 42  FFYSSISNPTNTNIEERLYRRISPVGNPNVSVVPILEQWVQEGKPVSQIELQRIIKELRI 101

Query: 81  YKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVH 140
           +KRF HALEIS+WMSDKRY+ LST D+A R++LI KVHGL++  +YFN IP+ LK F+V+
Sbjct: 102 FKRFHHALEISQWMSDKRYMHLSTKDVAARLDLISKVHGLDEAVNYFNDIPAALKIFEVY 161

Query: 141 IALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKE 200
             LLNCYA+EK V+KA  I+Q++++M   +TP+ YNIMMNLYY   +++KLD L+ EM+E
Sbjct: 162 STLLNCYANEKSVEKAEEIMQQMRDMWDHKTPICYNIMMNLYYHTEDYDKLDSLMSEMEE 221

Query: 201 KGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLID 260
           KG+ +D +T+SI++SAY A SD+  V+KI+E++ES   +VLDWN Y +AA+ +L VGL+D
Sbjct: 222 KGIPFDTYTFSIRMSAYVAISDVEGVNKIMEKVESYPGLVLDWNFYSVAASSHLNVGLVD 281

Query: 261 KSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKKEKVYNKGFISMI 320
           K+V +L+K E  L T  R+ +AFD LLK YA  G +DE++R+W+LYKKEK++NKG+ SMI
Sbjct: 282 KAVEMLKKLEDRLPTVNRKSFAFDALLKSYALIGNRDELYRIWDLYKKEKLFNKGYKSMI 341

Query: 321 RSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGK 380
            SLL +DD++GA +I++EWE+R L +D  IP++++D Y R+GLLEKAE L++K +    +
Sbjct: 342 CSLLRIDDVEGAAKIYEEWESRGLPFDFLIPDLMIDTYFRKGLLEKAEALVDKAIAKGDE 401

Query: 381 FSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILAT---FLDGKQDVKEA 440
            S+E W YL    L  +Q+ +AV+ LKKA S+        KE L+    +LDGK D++ A
Sbjct: 402 SSVELWYYLVIRSLEHNQISKAVEALKKAISVWSPGSKPSKETLSVCLEYLDGKVDIEGA 461

Query: 441 DKVVNLLRSEANSLFA 447
              +NLLR+E  S  A
Sbjct: 462 QMSINLLRTEGISYAA 477

[Close]
BLAST of Lsi02G007460 vs. TrEMBL
Match: A0A0A0LSC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073800 PE=4 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 9.7e-124
Identity = 234/368 (63.59%), Postives = 275/368 (74.73%), Query Frame = 1 

Query: 87  MSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCV 146
           MSDKRY PLST DIATRMNLIL+VHGLEQVEDYFN++PSQLK+ QVHIALLNCYAHEK  
Sbjct: 1   MSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYA 60

Query: 147 DKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQ 206
           DKANA+LQKIKEMGF +T L YNI MNLY+QIGEFE+LD     +KE  V +D+FTY+ +
Sbjct: 61  DKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLD---SPLKETDVDHDQFTYTTR 120

Query: 207 LSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLL 266
                                      L+WNCYVIAAN Y KVGLIDKS+S+L+KSEGLL
Sbjct: 121 ---------------------------LNWNCYVIAANAYNKVGLIDKSISMLKKSEGLL 180

Query: 267 ATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKKEKVYNKGFISMIRSLLILDDIKGAE 326
           A  K++G+AF++ LKLYA++GKKDE+H +WNLYKKEK++NKGFISMI SL +LDDIKGAE
Sbjct: 181 ANVKKKGFAFNVYLKLYARNGKKDEIHLIWNLYKKEKIFNKGFISMITSLFVLDDIKGAE 240

Query: 327 RIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASGY 386
           RI+KEWET+KLSYDLRIPN+LVDAYCR                             ASGY
Sbjct: 241 RIYKEWETQKLSYDLRIPNLLVDAYCR----------------------------AASGY 300

Query: 387 LRKDQLPQAVDTLKKAASLCPSELNHFKEILATFLDGKQDVKEADKVVNLLRSEANS--L 446
           L+KDQLPQAV+TLKKAASLCPSELN+ KEILA FLDGKQD +E +KVVNLLR + +S   
Sbjct: 301 LQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPA 310

Query: 447 FAPDVLIE 453
            A D+L+E
Sbjct: 361 RAHDILVE 310

[Close]
BLAST of Lsi02G007460 vs. TrEMBL
Match: A0A068TUA9_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029177001 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 4.8e-123
Identity = 213/416 (51.20%), Postives = 309/416 (74.28%), Query Frame = 1 

Query: 29  DSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMS 88
           ++LYKRISP+GDP ISV+PVLDQW  EGRPV ++ L+ IVKEL+ YKR+KHALE+S+WM+
Sbjct: 40  NNLYKRISPLGDPKISVVPVLDQWAAEGRPVHKQYLESIVKELKAYKRYKHALEVSRWMT 99

Query: 89  DKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVDK 148
           +KRY+PL  +D++ ++NLI +VHGL++ E+ FN++ S+LK F  HIALLNCY HEK V+K
Sbjct: 100 EKRYMPLRELDVSIQINLIHRVHGLKEAENCFNNVSSKLKGFNAHIALLNCYVHEKSVEK 159

Query: 149 ANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLS 208
           A A++QK++EMG+  +PL YN+MMNL+Y +G ++KLD L+ EM+ +G+ +D FT +I+LS
Sbjct: 160 AEALMQKMREMGYANSPLPYNLMMNLHYGLGNYKKLDDLMNEMEGRGIKFDPFTLTIRLS 219

Query: 209 AYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLAT 268
           AYAAASD   VDKI + ME D  IV D++ Y + A GYLKVG +DK++ IL+K E L  T
Sbjct: 220 AYAAASDAEGVDKIAKMMEIDPLIVPDFSVYAVVAQGYLKVGQLDKALPILKKMEELAVT 279

Query: 269 AKRRGYAFDILLKLYAKSGKKDEVHRVWNLYK-KEKVYNKGFISMIRSLLILDDIKGAER 328
            ++  + +D LLKLYA   ++D+V R+W +YK K+K+ NKG+++M+ SLL   D+ G E 
Sbjct: 280 TRKGKFPYDFLLKLYAGMQRRDDVLRIWEMYKQKQKINNKGYMTMMSSLLSFGDVGGIED 339

Query: 329 IFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASGYL 388
           IFKEWE+R LSYD R+PN+L+ AYCR G LEKAE LI+K +   G+    +W Y+A GY+
Sbjct: 340 IFKEWESRGLSYDFRVPNVLIHAYCRNGELEKAEALIDKGLSEGGEPFATTWFYMALGYI 399

Query: 389 RKDQLPQAVDTLKKAASLCPSELNHFKEILATFLDGKQ--DVKEADKVVNLLRSEA 442
           + +Q+ +AV+ LKKA   CP +     E L T L+  +  DV+++++ + L++ E+
Sbjct: 400 KDNQISKAVEALKKAILKCPPDHKPNTETLNTCLEHMERGDVEKSEEFIKLIKKES 455

[Close]
BLAST of Lsi02G007460 vs. TrEMBL
Match: A0A067JGJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03056 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 3.2e-119
Identity = 215/411 (52.31%), Postives = 303/411 (73.72%), Query Frame = 1 

Query: 31  LYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMSDK 90
           LY+RISPVGD  +S++P+LDQW+ EGR V R +L   +KELR YKR+ HALEI  WM+DK
Sbjct: 48  LYRRISPVGDHKVSIVPILDQWIEEGRSVNRFQLIGAIKELRYYKRYSHALEILTWMTDK 107

Query: 91  RYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVDKAN 150
           RY  L + DIA R++L+ KVHG+E+ E YFN++P +LK  +V+  LL+CYAH   V+KA 
Sbjct: 108 RYFALCSPDIALRLDLMSKVHGIEEAEKYFNNVPQKLKVVEVYGGLLHCYAHATHVEKAE 167

Query: 151 AILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLSAY 210
           A++QK++++GFDRT  +YN M+NLYY+ G FEKLD L+ EM+E G+ YD+ T S+QLSAY
Sbjct: 168 ALMQKMRDLGFDRTLFTYNDMLNLYYRTGNFEKLDALVHEMEENGIVYDKITISLQLSAY 227

Query: 211 AAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLATAK 270
           AA S+I  ++K++++MESD  IVLDW  Y  AA GY K GL DK++ +L+KSE L+ +  
Sbjct: 228 AAVSNIEGMEKVIKKMESDRKIVLDWITYSAAATGYAKAGLADKALEMLKKSERLITS-- 287

Query: 271 RRGYAFDILLKLYAKSGKKDEVHRVWNLY-KKEKVYNKGFISMIRSLLILDDIKGAERIF 330
           +R  A++ L+  YA  GKKDEV R+W LY KKEKVYNKG+  +I SLL  DDI+ AE+IF
Sbjct: 288 KRSRAYEGLITQYATLGKKDEVLRIWELYRKKEKVYNKGYTRIITSLLKFDDIESAEKIF 347

Query: 331 KEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASGYLRK 390
           +EWE++ L YD++IPN L+ AY R+GLLE+AE+LI++ V   GK +  +WC+LA+GYL K
Sbjct: 348 EEWESQNLFYDIQIPNCLIGAYSRKGLLERAENLIDRAVSKGGKTNALTWCHLATGYLLK 407

Query: 391 DQLPQAVDTLKKAASLCPSELNHFKEILATFLD---GKQDVKEADKVVNLL 438
           DQ  QAV+T+KKA  +   +    KE LA+ L+   G+++ ++ ++ + LL
Sbjct: 408 DQTAQAVETMKKAKVVLQPDRMPSKERLASCLENLKGEENFEKVEEFIKLL 456

[Close]
BLAST of Lsi02G007460 vs. TAIR10
Match: AT2G20710.1 (AT2G20710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 329.7 bits (844), Expect = 2.8e-90
Identity = 164/416 (39.42%), Postives = 278/416 (66.83%), Query Frame = 1 

Query: 29  DSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMS 88
           D+L +R++  GDP+ S+I VLD W+ +G  V+  EL  I+K LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVDK 148
           + R   +S  D+A R++LI KV GL + E +F +IP + + + ++ ALLNCYA +K + K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLS 208
           A  + Q++KE+GF +  L YN+M+NLY + G++  ++ LL+EM+++ V  D FT + +L 
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 AYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLAT 268
           AY+  SD+  ++K + + E+D  + LDW  Y   ANGY+K GL +K++ +LRKSE ++  
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV-N 277

Query: 269 AKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK-EKVYNKGFISMIRSLLILDDIKGAER 328
           A++R +A+++L+  Y  +GKK+EV+R+W+LYK+ +  YN G+IS+I +LL +DDI+  E+
Sbjct: 278 AQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 329 IFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIE---SWCYLAS 388
           I +EWE     +D+RIP++L+  YC++G++EKAE+++N   I+  K+ +E   +W  LA 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVN---ILVQKWRVEDTSTWERLAL 397

Query: 389 GYLRKDQLPQAVDTLKKAASLCPSELNHFKEILAT---FLDGKQDVKEADKVVNLL 438
           GY    ++ +AV+  K+A  +        + +L +   +L+G++D++   K++ LL
Sbjct: 398 GYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449

[Close]
BLAST of Lsi02G007460 vs. TAIR10
Match: AT4G21705.1 (AT4G21705.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 271.6 bits (693), Expect = 9.1e-73
Identity = 151/397 (38.04%), Postives = 240/397 (60.45%), Query Frame = 1 

Query: 9   PMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIV 68
           P +LIA R    Y+ + + K +LY +ISP+GDP  SV P L  WV  G+ V   EL +IV
Sbjct: 8   PANLIASR---YYYTNRVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIV 67

Query: 69  KELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLK 128
            +LR  KRF HALE+SKWM++      S  + A  ++LI +V+G    E+YF ++  Q K
Sbjct: 68  HDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYK 127

Query: 129 KFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLL 188
             + + ALLNCY  ++ V+K+    +K+KEMGF  + L+YN +M LY  IG+ EK+  +L
Sbjct: 128 NDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVL 187

Query: 189 QEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLK 248
           +EMKE+ V+ D ++Y I ++A+ A  D+ R+   +  ME   +I +DWN Y +AA  Y+ 
Sbjct: 188 EEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYID 247

Query: 249 VGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK--EKVYN 308
            G  D++V +L+ SE  L   K+ G  ++ L+ LYA+ GKK EV R+W+L K   ++  N
Sbjct: 248 GGDCDRAVELLKMSENRL--EKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRIN 307

Query: 309 KGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINK 368
           + ++++++SL+ +D +  AE +  EW++    YD R+PN ++  Y  + + EKAE ++ +
Sbjct: 308 QDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAML-E 367

Query: 369 TVIVRGKFSI-ESWCYLASGYLRKDQLPQAVDTLKKA 403
            +  RGK +  ESW  +A+ Y  K  L  A   +K A
Sbjct: 368 DLARRGKATTPESWELVATAYAEKGTLENAFKCMKTA 398

[Close]
BLAST of Lsi02G007460 vs. TAIR10
Match: AT1G02150.1 (AT1G02150.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 265.4 bits (677), Expect = 6.5e-71
Identity = 151/438 (34.47%), Postives = 250/438 (57.08%), Query Frame = 1 

Query: 20  VYFYSTIAKD--------SLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKEL 79
           VY Y T+  +        ++YK+IS +  P +    VL+QW   GR + + EL ++VKEL
Sbjct: 50  VYGYGTVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKEL 109

Query: 80  RVYKRFKHALEISKWMSDK-RYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKF 139
           R YKR   ALE+  WM+++     LS  D A +++LI KV G+   E++F  +P   K  
Sbjct: 110 RKYKRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDR 169

Query: 140 QVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQE 199
           +V+ +LLN Y   K  +KA A+L  +++ G+   PL +N+MM LY  + E++K+D ++ E
Sbjct: 170 RVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFE 229

Query: 200 MKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVG 259
           MK+K +  D ++Y+I LS+  +   + +++ + +QM+SD +I  +W  +   A  Y+K+G
Sbjct: 230 MKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMG 289

Query: 260 LIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK--EKVYNKG 319
             +K+   LRK E  +    R  Y +  LL LY   G K E++RVW++YK     + N G
Sbjct: 290 ETEKAEDALRKVEARITGRNRIPYHY--LLSLYGSLGNKKELYRVWHVYKSVVPSIPNLG 349

Query: 320 FISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTV 379
           + +++ SL+ + DI+GAE++++EW   K SYD RIPN+L++AY +   LE AE L +  V
Sbjct: 350 YHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMV 409

Query: 380 IVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILAT----FLDGK 439
            + GK S  +W  LA G+ RK  + +A+  L+ A S   S     K ++ +      + +
Sbjct: 410 EMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEE 469

Query: 440 QDVKEADKVVNLLRSEAN 443
            DV   + V+ LLR   +
Sbjct: 470 SDVTSKEAVLELLRQSGD 485

[Close]
BLAST of Lsi02G007460 vs. TAIR10
Match: AT1G28020.1 (AT1G28020.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 230.3 bits (586), Expect = 2.3e-60
Identity = 132/339 (38.94%), Postives = 198/339 (58.41%), Query Frame = 1 

Query: 34  RISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMSDKRYL 93
           RI+     N  +IPVL+QW  +G  V    ++ I+K+LR   +   AL++S+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAH-EKCVDKANAI 153
            L   D A R++LI  V GLE+ E +F SIP   +   V+ +LLN YA  +K + KA A 
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 LQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAA 213
            QK++++G    P+ YN MM+LY  +   EK++ LL EMK+  V  D  T +  L  Y+A
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 ASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLATAKRR 273
             D+  ++K + + E    I L+W+  +  A  YL+     K++ +LR +E L+   K  
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLV-DQKSL 280

Query: 274 GYAFDILLKLYAKSGKKDEVHRVWNLYKKE--KVYNKGFISMIRSLLILDDIKGAERIFK 333
             A+D L+KLY ++G ++EV RVW LYK +  +  N G+ ++IRSLL +DDI GAE I+K
Sbjct: 281 KSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVI 370
            WE+  L +D RIP ML   Y   G+ EKAE L+N   I
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTI 378

[Close]
BLAST of Lsi02G007460 vs. TAIR10
Match: AT1G60770.1 (AT1G60770.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 228.8 bits (582), Expect = 6.8e-60
Identity = 129/427 (30.21%), Postives = 237/427 (55.50%), Query Frame = 1 

Query: 28  KDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWM 87
           ++ LY R+   G   + V   L+Q++   + V + E+   +K+LR    +  AL++S+ M
Sbjct: 22  EEPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM 81

Query: 88  SDKRYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVD 147
            ++R +  +  D A  ++L+ K   +   E+YF  +P   K    + +LLNCY  E   +
Sbjct: 82  -EERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTE 141

Query: 148 KANAILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQL 207
           KA  +L K+KE+    + +SYN +M LY + GE EK+  ++QE+K + V  D +TY++ +
Sbjct: 142 KAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWM 201

Query: 208 SAYAAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLA 267
            A AA +DI  V++++E+M  D  +  DW  Y   A+ Y+  GL  K+   L++ E  + 
Sbjct: 202 RALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELE--MK 261

Query: 268 TAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYKK--EKVYNKGFISMIRSLLILDDIKGA 327
             +R   A+  L+ LY + GK  EV+R+W   +    K  N  +++MI+ L+ L+D+ GA
Sbjct: 262 NTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGA 321

Query: 328 ERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASG 387
           E +FKEW+    +YD+RI N+L+ AY +EGL++KA +L  K     GK + ++W      
Sbjct: 322 ETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDY 381

Query: 388 YLRKDQLPQAVDTLKKAASLCPSELNHF------KEILATFLDGKQDVKEADKVVNLLRS 447
           Y++   + +A++ + KA S+   +   +         L ++ + K+DV  A+ ++ +L++
Sbjct: 382 YVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKN 441

[Close]
BLAST of Lsi02G007460 vs. NCBI nr
Match: gi|659068040|ref|XP_008442434.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 737.6 bits (1903), Expect = 1.3e-209
Identity = 361/454 (79.52%), Postives = 415/454 (91.41%), Query Frame = 1 

Query: 1   MKLLQSGKPMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQ 60
           MKLLQS KP +LIA RR LV FYST  KD+LY+RISPVGDPNISVIPVLDQWVLEGR VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  REELQKIVKELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYF 120
           +EELQKI+KELRVYKRFKHALEISKWMSDKRYLPLST D+ATRMNLIL+VHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGE 180
           N++PSQLK++ VHIALLNCYAHEKCVDKANA LQKIKEMG+ ++ L YNIMMNLY+QIGE
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLYHQIGE 180

Query: 181 FEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYV 240
           FE+LD LL+EMKEKGV YDRFTYSI+LSAYAAASD   ++K++EQMES+T+IVLDWNCYV
Sbjct: 181 FERLDSLLKEMKEKGVYYDRFTYSIRLSAYAAASDCTGIEKMMEQMESNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYK 300
           IAAN Y KVGLIDKSVS+L+KSEG LAT K++G+AF++ LKLYA++GKKDEVHR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKVYNKGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKA 360
           KEK++NKGFISMIRSLLILDDI+GAE I+KEWET+KLSYD+RIPN+LVDAYCR GL+EKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EDLINKTVIVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILATF 420
           E+L+N+ V VRGKFS+ESWCYLASGYL+KDQLPQAV+TLKKAASLCPSELN+ KEILA F
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 LDGKQDVKEADKVVNLLRSE--ANSLFAPDVLIE 453
            DGKQDV+EA+KVVNLLR +   N   A D+L+E
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILVE 454

[Close]
BLAST of Lsi02G007460 vs. NCBI nr
Match: gi|778658728|ref|XP_011653157.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 718.8 bits (1854), Expect = 6.1e-204
Identity = 345/443 (77.88%), Postives = 403/443 (90.97%), Query Frame = 1 

Query: 1   MKLLQSGKPMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQ 60
           MKLLQS KP++LIAFR   V FYST+ KD+LY+RISPVGDPNISV P+LDQWVLEGR VQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  REELQKIVKELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYF 120
           ++EL+ I+KELRVYKRFKHALEISKWMSDKRY PLST DIA RMNLIL+VHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGE 180
           +++PSQLK++QVHIALLNCYAHEKCVDKANA +QKIKEMGF  +PL YNIMMNLY+QIGE
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGE 180

Query: 181 FEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYV 240
           FE+LD LL+EMKE+GV YDRFTYSI++SAYAAASD   ++KI+EQMES+ +IVLDWNCYV
Sbjct: 181 FERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYV 240

Query: 241 IAANGYLKVGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYK 300
           IAAN Y KVGLIDKS+S+L+KSEGLLA  K++G+AF++ LKLYA++GKKDE+HR+WNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKVYNKGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLEKA 360
           KEK++NKGFISMI SL +LDDIKGAERI+KEWETRKLSYDLRIPN+LVDAYCR GL+EKA
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EDLINKTVIVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFKEILATF 420
           E L+N+ VIVR KFS+ESWCYLASGYL+KDQLPQAV+TLK AAS+CPS LN+ KEILA F
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 LDGKQDVKEADKVVNLLRSEANS 444
           LDGKQDV+E +KVVNLLR + +S
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDS 443

[Close]
BLAST of Lsi02G007460 vs. NCBI nr
Match: gi|659068042|ref|XP_008442448.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 672.2 bits (1733), Expect = 6.5e-190
Identity = 331/449 (73.72%), Postives = 394/449 (87.75%), Query Frame = 1 

Query: 1   MKLLQSGKPMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQ 60
           MKLLQS K ++LIAFRR LV FYST   D LY+R+SPVGDPNIS++P+LDQWV EGRPVQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  REELQKIVKELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYF 120
             EL+ I+KELRVYKR+KHALE+SKWMSDK  LPLST DIATRMNLIL+VHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGE 180
           N++PS+LK++QVHIALLNCYAHEKCVDKANA+LQKIKE+GF  TP  YNIMMNLY+QIGE
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 FEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYV 240
           FE+LD L++EMKE+G+ YDRFTYSI+LSAYA ASD   ++KI EQMES+T+IVLDWNCYV
Sbjct: 181 FERLDSLMKEMKERGLYYDRFTYSIRLSAYATASDCAGIEKITEQMESNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLIDKSVSILRKSEGLLA-TAKRRGYAFDILLKLYAKSGKKDEVHRVWNLY 300
           +AA+ Y KVGLIDKS+S+L+KSE LLA TA+ + +AF+I L LYAK+GKKDE +R+WNLY
Sbjct: 241 VAADAYYKVGLIDKSISMLKKSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLY 300

Query: 301 KKEKVYNKGFISMIRSLLILDDIKGAERIFKE-----WETRKLSYDLRIPNMLVDAYCRE 360
           KKEKV+NKGFISMI SLLILDDIKGA RI +E     WET+KLSYDLRIPN+LVDAYCR 
Sbjct: 301 KKEKVFNKGFISMITSLLILDDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRA 360

Query: 361 GLLEKAEDLINKTVIVRGKFSIESWCYLASGYLRKDQLPQAVDTLKKAASLCPSELNHFK 420
           GL+E+AE L+ + + VR KFS++SWCY+ASGYL+KDQLP+AV+TLK AASLCPS+L++ K
Sbjct: 361 GLMEEAEVLVYEMMTVRRKFSVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVK 420

Query: 421 EILATFLDGKQDVKEADKVVNLLRSEANS 444
           EILA FLDGKQDV+E +KVVNLLR + NS
Sbjct: 421 EILAAFLDGKQDVEEVEKVVNLLREKDNS 449

[Close]
BLAST of Lsi02G007460 vs. NCBI nr
Match: gi|778658725|ref|XP_011653151.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 1.2e-154
Identity = 269/358 (75.14%), Postives = 315/358 (87.99%), Query Frame = 1 

Query: 1   MKLLQSGKPMHLIAFRRNLVYFYSTIAKDSLYKRISPVGDPNISVIPVLDQWVLEGRPVQ 60
           MKLLQS KP++LIAFRR  V FYST+ KDSLY+RISPVGDPNISV P+LDQWVLE   VQ
Sbjct: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60

Query: 61  REELQKIVKELRVYKRFKHALEISKWMSDKRYLPLSTVDIATRMNLILKVHGLEQVEDYF 120
           ++EL+ I+KELRVYKRFKHALEISKWMSDKRY PLST DIATRMNLIL+VHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 NSIPSQLKKFQVHIALLNCYAHEKCVDKANAILQKIKEMGFDRTPLSYNIMMNLYYQIGE 180
           N++PSQLK+ QVHIALLNCYAHEK  DKANA+LQKIKEMGF +T L YNI MNLY+QIGE
Sbjct: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGE 180

Query: 181 FEKLDPLLQEMKEKGVSYDRFTYSIQLSAYAAASDIMRVDKIVEQMESDTNIVLDWNCYV 240
           FE+LD     +KE  V +D+FTY+ +LSAYA A D   ++KI+EQME +T+IVLDWNCYV
Sbjct: 181 FERLD---SPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQMEXNTSIVLDWNCYV 240

Query: 241 IAANGYLKVGLIDKSVSILRKSEGLLATAKRRGYAFDILLKLYAKSGKKDEVHRVWNLYK 300
           IAAN Y KVGLIDKS+S+L+KSEGLLA  K++G+AF++ LKLYA++GKKDE+H +WNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHLIWNLYK 300

Query: 301 KEKVYNKGFISMIRSLLILDDIKGAERIFKEWETRKLSYDLRIPNMLVDAYCREGLLE 359
           KEK++NKGFISMI SL +LDDIKGAERI+KEWET+KLSYDLRIPN+LVDAYCR GL+E
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETQKLSYDLRIPNLLVDAYCRAGLME 355

[Close]
BLAST of Lsi02G007460 vs. NCBI nr
Match: gi|731437627|ref|XP_010647278.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Vitis vinifera])

HSP 1 Score: 486.9 bits (1252), Expect = 3.9e-134
Identity = 238/414 (57.49%), Postives = 320/414 (77.29%), Query Frame = 1 

Query: 31  LYKRISPVGDPNISVIPVLDQWVLEGRPVQREELQKIVKELRVYKRFKHALEISKWMSDK 90
           LY RISP+GD  IS++PVLD+WV +GR V  EEL+ I+++L  Y+RFKHALEIS+WMSDK
Sbjct: 44  LYWRISPLGDSKISMVPVLDEWVQKGRTVNEEELRDIIQKLNHYRRFKHALEISQWMSDK 103

Query: 91  RYLPLSTVDIATRMNLILKVHGLEQVEDYFNSIPSQLKKFQVHIALLNCYAHEKCVDKAN 150
           RY+PL   DIA RMNLILKVHGLEQVE+YFN+I   LK +QV+IALLNCYA EK VDKA 
Sbjct: 104 RYIPLMPRDIALRMNLILKVHGLEQVENYFNNIHKNLKTYQVYIALLNCYALEKSVDKAE 163

Query: 151 AILQKIKEMGFDRTPLSYNIMMNLYYQIGEFEKLDPLLQEMKEKGVSYDRFTYSIQLSAY 210
           AI+Q+++++GF RT L YN +MN+YY++G +EKLD L+ EM+EKG+  D+FT +I+LSAY
Sbjct: 164 AIMQRLRDLGFVRTALGYNTLMNVYYRMGNWEKLDILMHEMEEKGIFCDKFTLAIRLSAY 223

Query: 211 AAASDIMRVDKIVEQMESDTNIVLDWNCYVIAANGYLKVGLIDKSVSILRKSEGLLATAK 270
           AAAS+I+ +D IV +MESD  I+LDWN Y + A+GYLKVGL+DK++ +++K E L+  AK
Sbjct: 224 AAASNIVGIDNIVTRMESDPRIILDWNSYAVVAHGYLKVGLVDKTLVMMKKLEELI-DAK 283

Query: 271 RRGYAFDILLKLYAKSGKKDEVHRVWNLY-KKEKVYNKGFISMIRSLLILDDIKGAERIF 330
               AFD LLKLYA++ ++DE+ RVW LY KKEK+YNKG+++MI SLL  DDI  AE++ 
Sbjct: 284 GSNVAFDNLLKLYAETRQRDELDRVWMLYKKKEKIYNKGYMAMISSLLKFDDIDAAEKVL 343

Query: 331 KEWETRKLSYDLRIPNMLVDAYCREGLLEKAEDLINKTVIVRGKFSIESWCYLASGYLRK 390
           +EWE+R+LSYD R+PN L+DAYCR+GL EKAE L+NK +   G   +++W YLA+GYL  
Sbjct: 344 EEWESRRLSYDFRVPNFLIDAYCRKGLTEKAEALVNKILTKGGNPLVDTWFYLANGYLED 403

Query: 391 DQLPQAVDTLKKAASLCPSELNHFKEILAT---FLDGKQDVKEADKVVNLLRSE 441
            Q+P+AV+ LKKA  +CP      K  LAT   +L+G +DV+ A + +  L++E
Sbjct: 404 SQIPKAVEALKKAVVVCPPNWKPSKNTLATCLEYLEGNRDVEGAGEFIRFLQNE 456

The following BLAST results are available for this feature:
BLAST of Lsi02G007460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP166_ARATH5.0e-8939.42Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
PP334_ARATH1.6e-7138.04Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop... [more]
PPR3_ARATH1.2e-6934.47Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana GN... [more]
PPR61_ARATH4.1e-5938.94Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th... [more]
PPR86_ARATH1.2e-5830.21Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana GN... [more]
BLAST of Lsi02G007460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LV44_CUCSA4.3e-20477.88Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073790 PE=4 SV=1[more]
W9RYV8_9ROSA1.7e-12851.61Uncharacterized protein OS=Morus notabilis GN=L484_014527 PE=4 SV=1[more]
A0A0A0LSC2_CUCSA9.7e-12463.59Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073800 PE=4 SV=1[more]
A0A068TUA9_COFCA4.8e-12351.20Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029177001 PE=4 SV=1[more]
A0A067JGJ7_JATCU3.2e-11952.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03056 PE=4 SV=1[more]
BLAST of Lsi02G007460 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G20710.12.8e-9039.42 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G21705.19.1e-7338.04 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G02150.16.5e-7134.47 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G28020.12.3e-6038.94 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G60770.16.8e-6030.21 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Lsi02G007460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659068040|ref|XP_008442434.1|1.3e-20979.52PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
gi|778658728|ref|XP_011653157.1|6.1e-20477.88PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
gi|659068042|ref|XP_008442448.1|6.5e-19073.72PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
gi|778658725|ref|XP_011653151.1|1.2e-15475.14PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... [more]
gi|731437627|ref|XP_010647278.1|3.9e-13457.49PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009058 biosynthetic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G007460.1Lsi02G007460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 135..161
score: 0.073coord: 345..366
score: 0.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 167..211
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 167..199
score: 1.5E-4coord: 345..365
score: 0.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 199..229
score: 6.993coord: 340..375
score: 7.706coord: 129..163
score: 6.862coord: 272..306
score: 6.873coord: 164..198
score: 9
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 338..430
score: 4.8E-8coord: 130..181
score: 4.8E-8coord: 238..269
score: 4.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 330..429
score: 9.48E-6coord: 241..273
score: 9.4
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 28..438
score: 2.5E
NoneNo IPR availablePANTHERPTHR24015:SF644PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 28..438
score: 2.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G007460CsGy1G012070Cucumber (Gy14) v2cgyblsiB018
Lsi02G007460CsaV3_1G012240Cucumber (Chinese Long) v3cuclsiB022
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G007460Silver-seed gourdcarlsiB135
Lsi02G007460Silver-seed gourdcarlsiB150
Lsi02G007460Silver-seed gourdcarlsiB586
Lsi02G007460Silver-seed gourdcarlsiB866
Lsi02G007460Cucumber (Chinese Long) v3cuclsiB291
Lsi02G007460Cucumber (Chinese Long) v3cuclsiB465
Lsi02G007460Watermelon (97103) v2lsiwmbB154
Lsi02G007460Watermelon (97103) v2lsiwmbB169
Lsi02G007460Watermelon (97103) v2lsiwmbB176
Lsi02G007460Wax gourdlsiwgoB234
Lsi02G007460Wax gourdlsiwgoB247
Lsi02G007460Wax gourdlsiwgoB276
Lsi02G007460Bottle gourd (USVL1VR-Ls)lsilsiB066
Lsi02G007460Bottle gourd (USVL1VR-Ls)lsilsiB098
Lsi02G007460Cucumber (Gy14) v1cgylsiB023
Lsi02G007460Cucumber (Gy14) v1cgylsiB184
Lsi02G007460Cucumber (Gy14) v1cgylsiB194
Lsi02G007460Cucurbita maxima (Rimu)cmalsiB020
Lsi02G007460Cucurbita maxima (Rimu)cmalsiB207
Lsi02G007460Cucurbita maxima (Rimu)cmalsiB369
Lsi02G007460Cucurbita maxima (Rimu)cmalsiB414
Lsi02G007460Cucurbita maxima (Rimu)cmalsiB796
Lsi02G007460Cucurbita moschata (Rifu)cmolsiB008
Lsi02G007460Cucurbita moschata (Rifu)cmolsiB197
Lsi02G007460Cucurbita moschata (Rifu)cmolsiB356
Lsi02G007460Cucurbita moschata (Rifu)cmolsiB399
Lsi02G007460Cucurbita moschata (Rifu)cmolsiB783
Lsi02G007460Cucurbita pepo (Zucchini)cpelsiB026
Lsi02G007460Cucurbita pepo (Zucchini)cpelsiB402
Lsi02G007460Cucurbita pepo (Zucchini)cpelsiB417
Lsi02G007460Cucurbita pepo (Zucchini)cpelsiB635
Lsi02G007460Wild cucumber (PI 183967)cpilsiB021
Lsi02G007460Wild cucumber (PI 183967)cpilsiB273
Lsi02G007460Wild cucumber (PI 183967)cpilsiB444
Lsi02G007460Wild cucumber (PI 183967)cpilsiB521
Lsi02G007460Cucumber (Chinese Long) v2culsiB022
Lsi02G007460Cucumber (Chinese Long) v2culsiB274
Lsi02G007460Cucumber (Chinese Long) v2culsiB438
Lsi02G007460Cucumber (Chinese Long) v2culsiB508
Lsi02G007460Melon (DHL92) v3.5.1lsimeB179
Lsi02G007460Melon (DHL92) v3.5.1lsimeB228
Lsi02G007460Watermelon (Charleston Gray)lsiwcgB167
Lsi02G007460Watermelon (Charleston Gray)lsiwcgB170
Lsi02G007460Watermelon (Charleston Gray)lsiwcgB184
Lsi02G007460Watermelon (97103) v1lsiwmB184
Lsi02G007460Watermelon (97103) v1lsiwmB200
Lsi02G007460Watermelon (97103) v1lsiwmB219
Lsi02G007460Cucumber (Gy14) v2cgyblsiB252
Lsi02G007460Cucumber (Gy14) v2cgyblsiB401
Lsi02G007460Melon (DHL92) v3.6.1lsimedB189
Lsi02G007460Melon (DHL92) v3.6.1lsimedB239