CsGy1G012070 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G012070
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like
Location	Chr1 : 7589196 .. 7592028 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAATTTCGACCTAAAGTTTTTCTTTACATCAGCTGAAGAGCTCACGTACTTGGGCAGCGCCTAGTTTCTCCATTTTTTCTCCTCTCTTTTGCCTTTCCAAATGAAGCTCTTACAATCTCTAAAACCAATTAATTTGATTGCATTCCGGAGTGAATTCGTGAATTTCTACTCTACAGTTGTGAAGGATAACCTTTACAGAAGGATTTCTCCGGTGGGTGACCCTAATATCTCTGTAACTCCACTTCTTGATCAGTGGGTGTTAGAAGGCAGGCTTGTTCAGCAAGACGAACTTCGGCATATCATCAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGGTTTGATTTCTTATTCATATCTTCGTCGAAGTATGATGGTTTTCATTCGCTCTTATGCGAAATGCTTTTGTTGATTGATGCAAATGGGTCCCAACGATTTGGCATTGTTGATTTTTTAAGATGAATAATGTGTTCATCTATGTTCCAGCATGGTTTCTTCTCCTATGAAATTGCTAAGCCGCCAGGATTTTTTATTTGCTTTGTTGAAATAGACAGTATGTGATAATTGGCGTGGAGTTGCATTGTTTCATGGATAAATGTCTTTTCGTAATTAACCAACTTCGAGAAGGGATATGGCTATTCAAATGGTGATGAATAGTCTACACATATGTCTTTCTTCCCAAATTTTGTTCGCCGGTAAAACATTCTGCCTTTTGTAAATTTTGTTGTTTGTTTATTTTCACAAAGTATCATCCATTGAATCTTGTGTACAATGTGCCGCCTCCAAAAAAAAGTAATTAATTTTTTCTTGAACACAATTACTCATGAAACTTCGACATTAGAGTGAGTAACATTGTTTCTAATGTGAACCAAGTTTTTTATTTCCTGTTTTTTTGGTAATATTATCCATATAACAGCTCTAACCAATGAATTAATGAAATTAGTTCGTCAGGAAACAACTCTAGACTCTTAAGGGAGATGATTTTATTTCTATTTCCTCGTAGATTACATGTCATTCTTGATTCGATCTCAAATTCATGTCTGATAACTATTTTTTGTCATTGATAGTTTGTCTTGCTGTTCTGCCAATGCTTTTTTTTTTCTACTGTAGAGTTCACTTTCATGGAACTAGCTTGCTTTTCCTCTCAATTCATAACTGGCAAGAATAACGAATACATTGGAGAGCATTTGCTTTCCATGTTGTTCTTTCTGACATATCAAAGAAGCCACATTGTGTAGAGTTCTTGGCTTATTGATTTCATATTAAATTGAACTGTTCATTGTGTTTTACCCAGTATTATTGTTTTGACCCATCTCTTCAAACCCCCTTTCATCTTCAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAATACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTGGAAGATTATTTCGATAACATGCCTAGTCAGTTGAAAAGGTACCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTGCGTGGATAAAGCCAATGCCTTCATGCAGAAAATTAAGGAAATGGGTTTTGCTAATTCTCCTCTTCCATACAATATCATGATGAATCTTTATCACCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAAGGGGTGTTTATTATGATCGATTCACATACAGCATCCGAATAAGTGCATATGCTGCTGCATCTGATTTTAGGGGAATCGAAAAGATCATGGAACAAATGGAATCAAATCCGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAGGTTGGCTTAATAGACAAATCCATTTCCATGCTGAAGAAATCAGAAGGTCTCCTAGCAAATGTCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCGCATTTGGAATCTCTACAAGAAAGAAAAAATCTTCAACAAAGGTTTCATCAGCATGATAACATCACTTTTGATATTAGACGATATCAAAGGTGCAGAGCGTATTTACAAGGAATGGGAGACCAGGAAACTGTCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAAAGCTGAAGTGCTTCTAAATGAGATGGTGATTGTAAGACGCAAGTTTTCGGTCGAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAAGATCAACTACCTCAGGCAGTTGAGACACTGAAGTTAGCAGCCAGTGTGTGTCCATCACGACTGAACTACGTCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGTGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAAAAGATGACTCTCATCCTGCTCGTGCTCATGATTACATTGTTGGAGCGATTATGACCGAATCCGCCTAATTTAACTTTTATTCTAAAAGAACCCTTAAGTACTTAAGGGATATTTAGTAAGCAATGGTGATTATCAGTCGGTTAGGTTTTTTTATATAAAAAATTGATCTACCATAGTTGGTTTAGTGAAGTCTCAAAACGTCCTTAACATCGATGAGTAAGGGTCGGTCAGGTTGGTTTAACACTTAAAATATTTTTTGGAAATTCTCGATTTGAAACTTTTCAAAATCGACCCCTCTCATTTTTCGAACGATCGACTTAGGTTTGGTCAATTAGTTCTGTTTTTTTTTATATCATATTCACTCAATTATCGTGTTTCTTAGGGAAAAAAATGAAAATGATAAAAGAATGAAA

mRNA sequence

CTAATTTCGACCTAAAGTTTTTCTTTACATCAGCTGAAGAGCTCACGTACTTGGGCAGCGCCTAGTTTCTCCATTTTTTCTCCTCTCTTTTGCCTTTCCAAATGAAGCTCTTACAATCTCTAAAACCAATTAATTTGATTGCATTCCGGAGTGAATTCGTGAATTTCTACTCTACAGTTGTGAAGGATAACCTTTACAGAAGGATTTCTCCGGTGGGTGACCCTAATATCTCTGTAACTCCACTTCTTGATCAGTGGGTGTTAGAAGGCAGGCTTGTTCAGCAAGACGAACTTCGGCATATCATCAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAATACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTGGAAGATTATTTCGATAACATGCCTAGTCAGTTGAAAAGGTACCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTGCGTGGATAAAGCCAATGCCTTCATGCAGAAAATTAAGGAAATGGGTTTTGCTAATTCTCCTCTTCCATACAATATCATGATGAATCTTTATCACCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAAGGGGTGTTTATTATGATCGATTCACATACAGCATCCGAATAAGTGCATATGCTGCTGCATCTGATTTTAGGGGAATCGAAAAGATCATGGAACAAATGGAATCAAATCCGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAGGTTGGCTTAATAGACAAATCCATTTCCATGCTGAAGAAATCAGAAGGTCTCCTAGCAAATGTCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCGCATTTGGAATCTCTACAAGAAAGAAAAAATCTTCAACAAAGGTTTCATCAGCATGATAACATCACTTTTGATATTAGACGATATCAAAGGTGCAGAGCGTATTTACAAGGAATGGGAGACCAGGAAACTGTCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAAAGCTGAAGTGCTTCTAAATGAGATGGTGATTGTAAGACGCAAGTTTTCGGTCGAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAAGATCAACTACCTCAGGCAGTTGAGACACTGAAGTTAGCAGCCAGTGTGTGTCCATCACGACTGAACTACGTCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGTGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAAAAGATGACTCTCATCCTGCTCGTGCTCATGATTACATTGTTGGAGCGATTATGACCGAATCCGCCTAATTTAACTTTTATTCTAAAAGAACCCTTAAGTACTTAAGGGATATTTAGTAAGCAATGGTGATTATCAGTCGGTTAGGTTTTTTTATATAAAAAATTGATCTACCATAGTTGGTTTAGTGAAGTCTCAAAACGTCCTTAACATCGATGAGTAAGGGTCGGTCAGGTTGGTTTAACACTTAAAATATTTTTTGGAAATTCTCGATTTGAAACTTTTCAAAATCGACCCCTCTCATTTTTCGAACGATCGACTTAGGTTTGGTCAATTAGTTCTGTTTTTTTTTATATCATATTCACTCAATTATCGTGTTTCTTAGGGAAAAAAATGAAAATGATAAAAGAATGAAA

Coding sequence (CDS)

ATGAAGCTCTTACAATCTCTAAAACCAATTAATTTGATTGCATTCCGGAGTGAATTCGTGAATTTCTACTCTACAGTTGTGAAGGATAACCTTTACAGAAGGATTTCTCCGGTGGGTGACCCTAATATCTCTGTAACTCCACTTCTTGATCAGTGGGTGTTAGAAGGCAGGCTTGTTCAGCAAGACGAACTTCGGCATATCATCAAGGAGCTTAGGGTTTACAAGCGGTTCAAACATGCTCTTGAGATATCAAAGTGGATGAGTGATAAAAGATACTTTCCTTTATCGACTGCTGATATCGCAATACGGATGAATTTGATCTTAAGAGTTCATGGGTTGGAACAAGTGGAAGATTATTTCGATAACATGCCTAGTCAGTTGAAAAGGTACCAAGTTCATATAGCTCTTCTTAACTGCTATGCGCATGAAAAGTGCGTGGATAAAGCCAATGCCTTCATGCAGAAAATTAAGGAAATGGGTTTTGCTAATTCTCCTCTTCCATACAATATCATGATGAATCTTTATCACCAAATTGGAGAATTTGAGAGATTAGATTCTCTGTTGAAAGAAATGAAAGAAAGGGGTGTTTATTATGATCGATTCACATACAGCATCCGAATAAGTGCATATGCTGCTGCATCTGATTTTAGGGGAATCGAAAAGATCATGGAACAAATGGAATCAAATCCGAGTATTGTTCTAGATTGGAACTGTTATGTCATTGCTGCAAATGCTTACAATAAGGTTGGCTTAATAGACAAATCCATTTCCATGCTGAAGAAATCAGAAGGTCTCCTAGCAAATGTCAAAAAGAAAGGTTTTGCATTTAATGTCTACCTCAAACTATATGCCAGAAATGGAAAGAAAGACGAGATACACCGCATTTGGAATCTCTACAAGAAAGAAAAAATCTTCAACAAAGGTTTCATCAGCATGATAACATCACTTTTGATATTAGACGATATCAAAGGTGCAGAGCGTATTTACAAGGAATGGGAGACCAGGAAACTGTCATACGACTTGCGGATTCCAAACTTGTTGGTTGATGCGTATTGTAGAGCTGGTCTAATGGAGAAAGCTGAAGTGCTTCTAAATGAGATGGTGATTGTAAGACGCAAGTTTTCGGTCGAGTCGTGGTGCTATTTAGCGAGTGGATATCTTCAGAAAGATCAACTACCTCAGGCAGTTGAGACACTGAAGTTAGCAGCCAGTGTGTGTCCATCACGACTGAACTACGTCAAGGAAATTTTGGCAGCATTTTTGGATGGGAAGCAAGATGTGGAAGAAACTGAGAAAGTGGTTAATTTGTTGAGGGAAAAAGATGACTCTCATCCTGCTCGTGCTCATGATTACATTGTTGGAGCGATTATGACCGAATCCGCCTAA

Protein sequence

MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA

Homology

[Close]

BLAST of CsGy1G012070 vs. NCBI nr
Match: XP_011653157.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus] >KGN64672.1 hypothetical protein Csa_1G073790 [Cucumis sativus])

HSP 1 Score: 785.4 bits (2027), Expect = 1.0e-223
Identity = 459/461 (99.57%), Postives = 460/461 (99.78%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
           QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360
           KEKIFNKGFISMITSL +LDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420
           EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA 462
           LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA 461

[Close]

BLAST of CsGy1G012070 vs. NCBI nr
Match: XP_008442434.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 672.2 bits (1733), Expect = 1.3e-189
Identity = 398/453 (87.86%), Postives = 420/453 (92.72%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQS+KP NLIA R   VNFYST VKDNLYRRISPVGDPNISV P+LDQWVLEGR+VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELRVYKRFKHALEISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +NMPSQLKRY VHIALLNCYAHEKCVDKANAF+QKIKEMG+A S LPYNIMM  XXXXXX
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N SIVLDWNCYV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           IAANAYNKVGLIDKS+SMLKKSEG LA  KKKG AFNVYLKLYARNGKKDE+HRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360
           KEKIFNKGFISMI SLLILDDI+GAE IYKEWET+KLSYD+RIPNLLVDAYCRAGL+EKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420
           E L+NE+V VR KFSVESWCYLASGYLQKDQLPQAVETLK AAS+CPS LNYVKEILAAF
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 454
            DGKQDVEE EKVVNLLREKD+ +PARAHD +V
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453

[Close]

BLAST of CsGy1G012070 vs. NCBI nr
Match: XP_008442448.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis melo])

HSP 1 Score: 639.8 bits (1649), Expect = 7.1e-180
Identity = 371/467 (79.44%), Postives = 403/467 (86.30%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQS+K INLIAFR E VNFYST V D+LYRR+SPVGDPNIS+ P+LDQWV EGR VQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
             ELR IIKELRVYKR+KHALE+SKWMSDK   PLSTADIA RMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +NMPS+LKRYQVHIALLNCYAHEKCVDKANA +QKIKE+GFA +P PYNIMM        
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            N SIVLDWNCYV
Sbjct: 181 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIEKITEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLA-NVKKKGFAFNVYLKLYARNGKKDEIHRIWNLY 300
           +AA+AY KVGLIDKSISMLKKSE LLA   + K  AFN+YL LYA+NGKKDE +RIWNLY
Sbjct: 241 VAADAYYKVGLIDKSISMLKKSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLY 300

Query: 301 KKEKIFNKGFISMITSLLILDDIKGAERIYKE-----WETRKLSYDLRIPNLLVDAYCRA 360
           KKEK+FNKGFISMITSLLILDDIKGA RI +E     WET+KLSYDLRIPNLLVDAYCRA
Sbjct: 301 KKEKVFNKGFISMITSLLILDDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRA 360

Query: 361 GLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVK 420
           GLME+AEVL+ EM+ VRRKFSV+SWCY+ASGYLQKDQLP+AVETLK+AAS+CPS+L+YVK
Sbjct: 361 GLMEEAEVLVYEMMTVRRKFSVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVK 420

Query: 421 EILAAFLDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA 462
           EILAAFLDGKQDVEE EKVVNLLREKD+SHPAR HDY   AIMTESA
Sbjct: 421 EILAAFLDGKQDVEEVEKVVNLLREKDNSHPARGHDY---AIMTESA 464

[Close]

BLAST of CsGy1G012070 vs. NCBI nr
Match: XP_022140106.1 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momordica charantia])

HSP 1 Score: 544.7 bits (1402), Expect = 3.1e-151
Identity = 322/453 (71.08%), Postives = 380/453 (83.89%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLL   K ++ +AFR    +FYS + +D+LYRRISPVGDPN+SV P+LDQWV EGR VQ
Sbjct: 1   MKLLVPGKQVHPVAFRRILGHFYSMIARDSLYRRISPVGDPNVSVIPVLDQWVREGRPVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELR+YKR KHALEISKWM DKRY PLS+ DIA RMNLILRVHGLEQVEDYF
Sbjct: 61  REELQKIIKELRIYKRSKHALEISKWMGDKRYLPLSSVDIATRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +++PSQLK++QVH+ALLNCYAHEKCVDKANA +QKIKEMGF  +PLPYNIMM       X
Sbjct: 121 NSIPSQLKKFQVHVALLNCYAHEKCVDKANAILQKIKEMGFDGAPLPYNIMMNLYYQIGX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P IV DW+CYV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDPRIVPDWSCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           IAAN Y KVGL+DKS+SML+KSE LLA  K++G AF++ LKLYA +GKKDE+HRIW LYK
Sbjct: 241 IAANGYLKVGLVDKSLSMLRKSEALLATAKRRGSAFDILLKLYAESGKKDELHRIWKLYK 300

Query: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360
           KEK++NKG++SM+ SLLILDDI+ AE I+K+WET KLS DLRIPN+L++AYCR GLMEKA
Sbjct: 301 KEKVYNKGYMSMMRSLLILDDIEAAEHIFKDWETWKLSNDLRIPNMLIEAYCRRGLMEKA 360

Query: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420
           E L+N+ V  + KFSV SWCYLA+ Y+QKDQL   VE LK AA++CP  LN+ KEILA F
Sbjct: 361 EALINKAVTGKSKFSVHSWCYLANAYIQKDQLQHTVEALKKAATLCPPELNHFKEILATF 420

Query: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 454
           L+GKQDV+E EKVV LLR + +S    AHD ++
Sbjct: 421 LEGKQDVKEAEKVVGLLRAEANS--LFAHDVLI 451

[Close]

BLAST of CsGy1G012070 vs. NCBI nr
Match: XP_011653151.1 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 540.0 bits (1390), Expect = 7.7e-150
Identity = 283/358 (79.05%), Postives = 289/358 (80.73%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQSLKPINLIAFR EFVNFYSTVVKD+LYRRISPVGDPNISVTPLLDQWVLE  LVQ
Sbjct: 1   MKLLQSLKPINLIAFRREFVNFYSTVVKDSLYRRISPVGDPNISVTPLLDQWVLESGLVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
           QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIA RMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +NMPSQLKR QVHIALLNCYAHEK  DKANA +QKIKEMGFA + LPYNI M        
Sbjct: 121 NNMPSQLKRCQVHIALLNCYAHEKYADKANAVLQKIKEMGFAKTSLPYNITM---NLYHQ 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
                                                          XN SIVLDWNCYV
Sbjct: 181 IGEFERLDSPLKETDVDHDQFTYTTRLSAYATAFDFTGIEKIMEQMEXNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIH IWNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHLIWNLYK 300

Query: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLME 359
           KEKIFNKGFISMITSL +LDDIKGAERIYKEWET+KLSYDLRIPNLLVDAYCRAGLME
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETQKLSYDLRIPNLLVDAYCRAGLME 355

[Close]

BLAST of CsGy1G012070 vs. TAIR10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 271.6 bits (693), Expect = 9.2e-73
Identity = 148/416 (35.58%), Postives = 231/416 (55.53%), Query Frame = 0


Query: 29  DNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMS 88
           D L RR++  GDP+ S+  +LD W+ +G LV+  EL  IIK LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDK 148
           + R   +S  D+AIR++LI +V GL + E +F+ +P + + Y ++ ALLNCYA +K + K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 208
           A    Q++KE+GF    LPYN+M+                                    
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 XXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLAN 268
                               +  + LDW  Y   AN Y K GL +K++ ML+KSE ++ N
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV-N 277

Query: 269 VKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK-EKIFNKGFISMITSLLILDDIKGAER 328
            +K+  A+ V +  Y   GKK+E++R+W+LYK+ +  +N G+IS+I++LL +DDI+  E+
Sbjct: 278 AQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 329 IYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYL 388
           I +EWE     +D+RIP+LL+  YC+ G+MEKAE ++N +V   R     +W  LA GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 389 QKDQLPQAVETLKLAASVCPSRLNYVKEILAA---FLDGKQDVEETEKVVNLLREK 441
              ++ +AVE  K A  V        + +L +   +L+G++D+E   K++ LL E+
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER 452

[Close]

BLAST of CsGy1G012070 vs. TAIR10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-57
Identity = 136/407 (33.42%), Postives = 204/407 (50.12%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           M +L+ + P NLIA R  + N    V K  LY +ISP+GDP  SV P L  WV  G+ V 
Sbjct: 1   MNILRRI-PANLIASRYYYTN---RVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVS 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
             EL  I+ +LR  KRF HALE+SKWM++      S  + A+ ++LI RV+G    E+YF
Sbjct: 61  VAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +N+  Q K  + + ALLNCY  ++ V+K+    +K+KEMGF  S L YN +M        
Sbjct: 121 ENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQ 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
                                                              I +DWN Y 
Sbjct: 181 HEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYA 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           +AA  Y   G  D+++ +LK SE  L   KK G  +N  + LYAR GKK E+ R+W+L K
Sbjct: 241 VAAKFYIDGGDCDRAVELLKMSENRLE--KKDGEGYNHLITLYARLGKKIEVLRLWDLEK 300

Query: 301 K--EKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLME 360
              ++  N+ +++++ SL+ +D +  AE +  EW++    YD R+PN ++  Y    + E
Sbjct: 301 DVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEE 360

Query: 361 KAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASV 406
           KAE +L ++    +  + ESW  +A+ Y +K  L  A + +K A  V
Sbjct: 361 KAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGV 401

[Close]

BLAST of CsGy1G012070 vs. TAIR10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-49
Identity = 181/420 (43.10%), Postives = 263/420 (62.62%), Query Frame = 0


Query: 31  LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
           +Y++IS +  P +    +L+QW   GR + + EL  ++KELR YKR   ALE+  WM+++
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 91  -RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKA 150
              F LS +D AI+++LI +V G+   E++F  +P   K  +V+ +LLN Y   K  +KA
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 151 NAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 210
            A +  +++ G+A  PLP+N+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 189 EALLNTMRDKGYALHPLPFNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 248

Query: 211 XXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANV 270
           XXXXXXXXXXXXXXXXXX + SI  +W  +   A  Y K+G  +K+   L+K E  +   
Sbjct: 249 XXXXXXXXXXXXXXXXXXSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG- 308

Query: 271 KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLLILDDIKGAER 330
            +    ++  L LY   G K E++R+W++YK     I N G+ ++++SL+ + DI+GAE+
Sbjct: 309 -RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 368

Query: 331 IYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYL 390
           +Y+EW   K SYD RIPNLL++AY +   +E AE L + MV +  K S  +W  LA G+ 
Sbjct: 369 VYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHT 428

Query: 391 QKDQLPQAVETLKLAASVCPSRLNYVKEILA-----AFLDGKQDVEETEKVVNLLREKDD 443
           +K  + +A+  L+ A S   S  N+  ++L         + + DV   E V+ LLR+  D
Sbjct: 429 RKRCISEALTCLRNAFSAEGSS-NWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485

[Close]

BLAST of CsGy1G012070 vs. TAIR10
Match: AT1G28020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 170.6 bits (431), Expect = 2.2e-42
Identity = 109/345 (31.59%), Postives = 168/345 (48.70%), Query Frame = 0


Query: 34  RISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYF 93
           RI+     N  + P+L+QW  +G  V    +R IIK+LR   +   AL++S+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAH-EKCVDKANAF 153
            L   D A R++LI  V GLE+ E +F+++P   +   V+ +LLN YA  +K + KA A 
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 MQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213
            QK++++G    P+PYN MM                                        
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 XXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANVKKK 273
                              I L+W+  +  A AY +     K++ ML+ +E L+     K
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLK 280

Query: 274 GFAFNVYLKLYARNGKKDEIHRIWNLYKKE--KIFNKGFISMITSLLILDDIKGAERIYK 333
             A++  +KLY   G ++E+ R+W LYK +  +  N G+ ++I SLL +DDI GAE IYK
Sbjct: 281 S-AYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFS 376
            WE+  L +D RIP +L   Y   G+ EKAE L+N   I  R+ +
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMN 384

[Close]

BLAST of CsGy1G012070 vs. TAIR10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-37
Identity = 103/382 (26.96%), Postives = 179/382 (46.86%), Query Frame = 0


Query: 24  STVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEI 83
           S+V   N  + I     P  SVT LL + +  G  V   ELR I K L    R+  AL++
Sbjct: 33  SSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQM 92

Query: 84  SKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNM----PSQLKRYQVHIALLNC 143
            +WM +++    S  DIA+R++LI++ HGL+Q E+YF+ +     S       ++ LL  
Sbjct: 93  MEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRA 152

Query: 144 YAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXX 203
           Y   K V +A A M+K+  +GF  +P P+N MM                           
Sbjct: 153 YVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRN 212

Query: 204 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISML 263
                                        + S+ + W+     AN Y K G  +K+  +L
Sbjct: 213 VLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVL 272

Query: 264 KKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLL 323
           + +E +L    + G+ F   + LYA  G K+ + R+W + K    +I    +I +++SL+
Sbjct: 273 EDAEKMLNRSNRLGYFF--LITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLV 332

Query: 324 ILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVE 383
              D++ AER++ EWE +  +YD+R+ N+L+ AY R G + KAE L   ++      + +
Sbjct: 333 KTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYK 392

Query: 384 SWCYLASGYLQKDQLPQAVETL 400
           +W  L  G+++ + + +A++ +
Sbjct: 393 TWEILMEGWVKCENMEKAIDAM 412

[Close]

BLAST of CsGy1G012070 vs. Swiss-Prot
Match: sp|Q9SKU6|PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-71
Identity = 148/416 (35.58%), Postives = 231/416 (55.53%), Query Frame = 0


Query: 29  DNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMS 88
           D L RR++  GDP+ S+  +LD W+ +G LV+  EL  IIK LR + RF HAL+IS WMS
Sbjct: 38  DTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMS 97

Query: 89  DKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDK 148
           + R   +S  D+AIR++LI +V GL + E +F+ +P + + Y ++ ALLNCYA +K + K
Sbjct: 98  EHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHK 157

Query: 149 ANAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 208
           A    Q++KE+GF    LPYN+M+                                    
Sbjct: 158 AEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLH 217

Query: 209 XXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLAN 268
                               +  + LDW  Y   AN Y K GL +K++ ML+KSE ++ N
Sbjct: 218 AYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMV-N 277

Query: 269 VKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK-EKIFNKGFISMITSLLILDDIKGAER 328
            +K+  A+ V +  Y   GKK+E++R+W+LYK+ +  +N G+IS+I++LL +DDI+  E+
Sbjct: 278 AQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEK 337

Query: 329 IYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYL 388
           I +EWE     +D+RIP+LL+  YC+ G+MEKAE ++N +V   R     +W  LA GY 
Sbjct: 338 IMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYK 397

Query: 389 QKDQLPQAVETLKLAASVCPSRLNYVKEILAA---FLDGKQDVEETEKVVNLLREK 441
              ++ +AVE  K A  V        + +L +   +L+G++D+E   K++ LL E+
Sbjct: 398 MAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER 452

[Close]

BLAST of CsGy1G012070 vs. Swiss-Prot
Match: sp|Q84JR3|PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.6e-56
Identity = 136/407 (33.42%), Postives = 204/407 (50.12%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           M +L+ + P NLIA R  + N    V K  LY +ISP+GDP  SV P L  WV  G+ V 
Sbjct: 1   MNILRRI-PANLIASRYYYTN---RVKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVS 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
             EL  I+ +LR  KRF HALE+SKWM++      S  + A+ ++LI RV+G    E+YF
Sbjct: 61  VAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +N+  Q K  + + ALLNCY  ++ V+K+    +K+KEMGF  S L YN +M        
Sbjct: 121 ENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQ 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
                                                              I +DWN Y 
Sbjct: 181 HEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYA 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           +AA  Y   G  D+++ +LK SE  L   KK G  +N  + LYAR GKK E+ R+W+L K
Sbjct: 241 VAAKFYIDGGDCDRAVELLKMSENRLE--KKDGEGYNHLITLYARLGKKIEVLRLWDLEK 300

Query: 301 K--EKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLME 360
              ++  N+ +++++ SL+ +D +  AE +  EW++    YD R+PN ++  Y    + E
Sbjct: 301 DVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEE 360

Query: 361 KAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASV 406
           KAE +L ++    +  + ESW  +A+ Y +K  L  A + +K A  V
Sbjct: 361 KAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGV 401

[Close]

BLAST of CsGy1G012070 vs. Swiss-Prot
Match: sp|Q8LPS6|PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 193.7 bits (491), Expect = 4.4e-48
Identity = 181/420 (43.10%), Postives = 263/420 (62.62%), Query Frame = 0


Query: 31  LYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDK 90
           +Y++IS +  P +    +L+QW   GR + + EL  ++KELR YKR   ALE+  WM+++
Sbjct: 69  IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNR 128

Query: 91  -RYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKA 150
              F LS +D AI+++LI +V G+   E++F  +P   K  +V+ +LLN Y   K  +KA
Sbjct: 129 GERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKA 188

Query: 151 NAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 210
            A +  +++ G+A  PLP+N+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 189 EALLNTMRDKGYALHPLPFNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 248

Query: 211 XXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANV 270
           XXXXXXXXXXXXXXXXXX + SI  +W  +   A  Y K+G  +K+   L+K E  +   
Sbjct: 249 XXXXXXXXXXXXXXXXXXSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITG- 308

Query: 271 KKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLLILDDIKGAER 330
            +    ++  L LY   G K E++R+W++YK     I N G+ ++++SL+ + DI+GAE+
Sbjct: 309 -RNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEK 368

Query: 331 IYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGYL 390
           +Y+EW   K SYD RIPNLL++AY +   +E AE L + MV +  K S  +W  LA G+ 
Sbjct: 369 VYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHT 428

Query: 391 QKDQLPQAVETLKLAASVCPSRLNYVKEILA-----AFLDGKQDVEETEKVVNLLREKDD 443
           +K  + +A+  L+ A S   S  N+  ++L         + + DV   E V+ LLR+  D
Sbjct: 429 RKRCISEALTCLRNAFSAEGSS-NWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGD 485

[Close]

BLAST of CsGy1G012070 vs. Swiss-Prot
Match: sp|Q9C7F1|PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 4.0e-41
Identity = 109/345 (31.59%), Postives = 168/345 (48.70%), Query Frame = 0


Query: 34  RISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEISKWMSDKRYF 93
           RI+     N  + P+L+QW  +G  V    +R IIK+LR   +   AL++S+WMS ++  
Sbjct: 41  RITDALHRNAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKIC 100

Query: 94  PLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAH-EKCVDKANAF 153
            L   D A R++LI  V GLE+ E +F+++P   +   V+ +LLN YA  +K + KA A 
Sbjct: 101 NLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEAT 160

Query: 154 MQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 213
            QK++++G    P+PYN MM                                        
Sbjct: 161 FQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSA 220

Query: 214 XXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLLANVKKK 273
                              I L+W+  +  A AY +     K++ ML+ +E L+     K
Sbjct: 221 VCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLK 280

Query: 274 GFAFNVYLKLYARNGKKDEIHRIWNLYKKE--KIFNKGFISMITSLLILDDIKGAERIYK 333
             A++  +KLY   G ++E+ R+W LYK +  +  N G+ ++I SLL +DDI GAE IYK
Sbjct: 281 S-AYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYK 340

Query: 334 EWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFS 376
            WE+  L +D RIP +L   Y   G+ EKAE L+N   I  R+ +
Sbjct: 341 VWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLMNSKTIKDRRMN 384

[Close]

BLAST of CsGy1G012070 vs. Swiss-Prot
Match: sp|Q3E911|PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.3e-36
Identity = 103/382 (26.96%), Postives = 179/382 (46.86%), Query Frame = 0


Query: 24  STVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELRHIIKELRVYKRFKHALEI 83
           S+V   N  + I     P  SVT LL + +  G  V   ELR I K L    R+  AL++
Sbjct: 33  SSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQM 92

Query: 84  SKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNM----PSQLKRYQVHIALLNC 143
            +WM +++    S  DIA+R++LI++ HGL+Q E+YF+ +     S       ++ LL  
Sbjct: 93  MEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRA 152

Query: 144 YAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXX 203
           Y   K V +A A M+K+  +GF  +P P+N MM                           
Sbjct: 153 YVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRN 212

Query: 204 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISML 263
                                        + S+ + W+     AN Y K G  +K+  +L
Sbjct: 213 VLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVL 272

Query: 264 KKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKK--EKIFNKGFISMITSLL 323
           + +E +L    + G+ F   + LYA  G K+ + R+W + K    +I    +I +++SL+
Sbjct: 273 EDAEKMLNRSNRLGYFF--LITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLV 332

Query: 324 ILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVE 383
              D++ AER++ EWE +  +YD+R+ N+L+ AY R G + KAE L   ++      + +
Sbjct: 333 KTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYK 392

Query: 384 SWCYLASGYLQKDQLPQAVETL 400
           +W  L  G+++ + + +A++ +
Sbjct: 393 TWEILMEGWVKCENMEKAIDAM 412

[Close]

BLAST of CsGy1G012070 vs. TrEMBL
Match: tr|A0A0A0LV44|A0A0A0LV44_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 6.9e-224
Identity = 459/461 (99.57%), Postives = 460/461 (99.78%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ
Sbjct: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
           QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF
Sbjct: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX
Sbjct: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300

Query: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360
           KEKIFNKGFISMITSL +LDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA
Sbjct: 301 KEKIFNKGFISMITSLFVLDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360

Query: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420
           EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF
Sbjct: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420

Query: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA 462
           LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA
Sbjct: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA 461

[Close]

BLAST of CsGy1G012070 vs. TrEMBL
Match: tr|A0A1S3B572|A0A1S3B572_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486303 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 8.5e-190
Identity = 398/453 (87.86%), Postives = 420/453 (92.72%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQS+KP NLIA R   VNFYST VKDNLYRRISPVGDPNISV P+LDQWVLEGR+VQ
Sbjct: 1   MKLLQSVKPTNLIALRRGLVNFYSTFVKDNLYRRISPVGDPNISVIPVLDQWVLEGRVVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
           ++EL+ IIKELRVYKRFKHALEISKWMSDKRY PLST D+A RMNLILRVHGLEQVEDYF
Sbjct: 61  KEELQKIIKELRVYKRFKHALEISKWMSDKRYLPLSTDDVATRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +NMPSQLKRY VHIALLNCYAHEKCVDKANAF+QKIKEMG+A S LPYNIMM  XXXXXX
Sbjct: 121 NNMPSQLKRYHVHIALLNCYAHEKCVDKANAFLQKIKEMGYAKSTLPYNIMMNLXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N SIVLDWNCYV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK 300
           IAANAYNKVGLIDKS+SMLKKSEG LA  KKKG AFNVYLKLYARNGKKDE+HRIWNLYK
Sbjct: 241 IAANAYNKVGLIDKSVSMLKKSEGRLATDKKKGHAFNVYLKLYARNGKKDEVHRIWNLYK 300

Query: 301 KEKIFNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKA 360
           KEKIFNKGFISMI SLLILDDI+GAE IYKEWET+KLSYD+RIPNLLVDAYCRAGL+EKA
Sbjct: 301 KEKIFNKGFISMIRSLLILDDIRGAEDIYKEWETQKLSYDVRIPNLLVDAYCRAGLIEKA 360

Query: 361 EVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAAF 420
           E L+NE+V VR KFSVESWCYLASGYLQKDQLPQAVETLK AAS+CPS LNYVKEILAAF
Sbjct: 361 EELVNEIVNVRGKFSVESWCYLASGYLQKDQLPQAVETLKKAASLCPSELNYVKEILAAF 420

Query: 421 LDGKQDVEETEKVVNLLREKDDSHPARAHDYIV 454
            DGKQDVEE EKVVNLLREKD+ +PARAHD +V
Sbjct: 421 SDGKQDVEEAEKVVNLLREKDNLNPARAHDILV 453

[Close]

BLAST of CsGy1G012070 vs. TrEMBL
Match: tr|A0A1S3B6G4|A0A1S3B6G4_CUCME (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486307 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 4.7e-180
Identity = 371/467 (79.44%), Postives = 403/467 (86.30%), Query Frame = 0


Query: 1   MKLLQSLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQ 60
           MKLLQS+K INLIAFR E VNFYST V D+LYRR+SPVGDPNIS+ P+LDQWV EGR VQ
Sbjct: 1   MKLLQSVKSINLIAFRRELVNFYSTFVNDDLYRRLSPVGDPNISIVPILDQWVSEGRPVQ 60

Query: 61  QDELRHIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYF 120
             ELR IIKELRVYKR+KHALE+SKWMSDK   PLSTADIA RMNLILRVHGLEQVEDYF
Sbjct: 61  IVELRLIIKELRVYKRYKHALEMSKWMSDKVCLPLSTADIATRMNLILRVHGLEQVEDYF 120

Query: 121 DNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXX 180
           +NMPS+LKRYQVHIALLNCYAHEKCVDKANA +QKIKE+GFA +P PYNIMM        
Sbjct: 121 NNMPSKLKRYQVHIALLNCYAHEKCVDKANALLQKIKELGFATTPHPYNIMMNLYHQIGE 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYV 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            N SIVLDWNCYV
Sbjct: 181 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGIEKITEQMESNTSIVLDWNCYV 240

Query: 241 IAANAYNKVGLIDKSISMLKKSEGLLA-NVKKKGFAFNVYLKLYARNGKKDEIHRIWNLY 300
           +AA+AY KVGLIDKSISMLKKSE LLA   + K  AFN+YL LYA+NGKKDE +RIWNLY
Sbjct: 241 VAADAYYKVGLIDKSISMLKKSEELLAKTAENKCHAFNIYLTLYAKNGKKDETYRIWNLY 300

Query: 301 KKEKIFNKGFISMITSLLILDDIKGAERIYKE-----WETRKLSYDLRIPNLLVDAYCRA 360
           KKEK+FNKGFISMITSLLILDDIKGA RI +E     WET+KLSYDLRIPNLLVDAYCRA
Sbjct: 301 KKEKVFNKGFISMITSLLILDDIKGARRICEEWETQVWETQKLSYDLRIPNLLVDAYCRA 360

Query: 361 GLMEKAEVLLNEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVK 420
           GLME+AEVL+ EM+ VRRKFSV+SWCY+ASGYLQKDQLP+AVETLK+AAS+CPS+L+YVK
Sbjct: 361 GLMEEAEVLVYEMMTVRRKFSVKSWCYIASGYLQKDQLPEAVETLKIAASLCPSKLDYVK 420

Query: 421 EILAAFLDGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAIMTESA 462
           EILAAFLDGKQDVEE EKVVNLLREKD+SHPAR HDY   AIMTESA
Sbjct: 421 EILAAFLDGKQDVEEVEKVVNLLREKDNSHPARGHDY---AIMTESA 464

[Close]

BLAST of CsGy1G012070 vs. TrEMBL
Match: tr|A0A0A0LSC2|A0A0A0LSC2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073800 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.9e-129
Identity = 255/367 (69.48%), Postives = 264/367 (71.93%), Query Frame = 0


Query: 87  MSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCV 146
           MSDKRYFPLSTADIA RMNLILRVHGLEQVEDYF+NMPSQLKR QVHIALLNCYAHEK  
Sbjct: 1   MSDKRYFPLSTADIATRMNLILRVHGLEQVEDYFNNMPSQLKRCQVHIALLNCYAHEKYA 60

Query: 147 DKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 206
           DKANA +QKIKEMGFA + LPYNI M                                  
Sbjct: 61  DKANAVLQKIKEMGFAKTSLPYNITMNLYHQIGEFERLDSPLKETDVDHDQFTY------ 120

Query: 207 XXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANAYNKVGLIDKSISMLKKSEGLL 266
                                   +  L+WNCYVIAANAYNKVGLIDKSISMLKKSEGLL
Sbjct: 121 ------------------------TTRLNWNCYVIAANAYNKVGLIDKSISMLKKSEGLL 180

Query: 267 ANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYKKEKIFNKGFISMITSLLILDDIKGAE 326
           ANVKKKGFAFNVYLKLYARNGKKDEIH IWNLYKKEKIFNKGFISMITSL +LDDIKGAE
Sbjct: 181 ANVKKKGFAFNVYLKLYARNGKKDEIHLIWNLYKKEKIFNKGFISMITSLFVLDDIKGAE 240

Query: 327 RIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLLNEMVIVRRKFSVESWCYLASGY 386
           RIYKEWET+KLSYDLRIPNLLVDAYCRA                            ASGY
Sbjct: 241 RIYKEWETQKLSYDLRIPNLLVDAYCRA----------------------------ASGY 300

Query: 387 LQKDQLPQAVETLKLAASVCPSRLNYVKEILAAFLDGKQDVEETEKVVNLLREKDDSHPA 446
           LQKDQLPQAVETLK AAS+CPS LNY KEILAAFLDGKQD EETEKVVNLLREKDDSHPA
Sbjct: 301 LQKDQLPQAVETLKKAASLCPSELNYAKEILAAFLDGKQDEEETEKVVNLLREKDDSHPA 309

Query: 447 RAHDYIV 454
           RAHD +V
Sbjct: 361 RAHDILV 309

[Close]

BLAST of CsGy1G012070 vs. TrEMBL
Match: tr|A0A2N9I6A5|A0A2N9I6A5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47431 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 2.3e-110
Identity = 278/455 (61.10%), Postives = 342/455 (75.16%), Query Frame = 0


Query: 6   SLKPINLIAFRSEFVNFYSTVVKDNLYRRISPVGDPNISVTPLLDQWVLEGRLVQQDELR 65
           SL+P  L   +    +F+S+    +LYRRIS +G PN+SV PLLDQWV EGR V ++EL+
Sbjct: 10  SLRP--LFPSQKLLCHFFSSNALHSLYRRISQLGGPNVSVVPLLDQWVQEGRPVPKEELQ 69

Query: 66  HIIKELRVYKRFKHALEISKWMSDKRYFPLSTADIAIRMNLILRVHGLEQVEDYFDNMPS 125
            IIKELRVYKRF HALEIS+WMSDKRY  LS  DIA RMNLI RVHGLEQVE+YF+N+P+
Sbjct: 70  RIIKELRVYKRFNHALEISQWMSDKRYIILSCGDIATRMNLIFRVHGLEQVENYFNNIPT 129

Query: 126 QLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNIMMXXXXXXXXXXXXX 185
            +K + V+ ALLNCYAHEK V+KA   MQ +K+MG            XXXXXXXXXXXXX
Sbjct: 130 NMKGFTVYTALLNCYAHEKSVEKAEIVMQSMKDMGLVXXXXXXXXXXXXXXXXXXXXXXX 189

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPSIVLDWNCYVIAANA 245
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+P +VL+WN Y IAAN 
Sbjct: 190 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQLVLNWNSYSIAANG 249

Query: 246 YNKVGLIDKSISMLKKSEGLLANVKKKGFAFNVYLKLYARNGKKDEIHRIWNLYK-KEKI 305
           Y KVGL+DK+++M+KKSEGL+ N KKK FAF++ LK YA  GKKDE++RIW LYK KEKI
Sbjct: 250 YLKVGLLDKALAMVKKSEGLIDNAKKKNFAFDLLLKQYAEIGKKDELYRIWKLYKEKEKI 309

Query: 306 FNKGFISMITSLLILDDIKGAERIYKEWETRKLSYDLRIPNLLVDAYCRAGLMEKAEVLL 365
           +NKG+ISMI+SLL  DDI+GAE I++EWE+RKLSYD R+PNLL++AY + GL+ KAE LL
Sbjct: 310 YNKGYISMISSLLAFDDIEGAENIFEEWESRKLSYDFRVPNLLINAYGQKGLLAKAEALL 369

Query: 366 NEMVIVRRKFSVESWCYLASGYLQKDQLPQAVETLKLAASVCPSRLNYVKEILAA---FL 425
           N  +    + S +SW YLASGYL  +Q+P+A+E +K A +VCP      KE LA    +L
Sbjct: 370 NRGMTRGGQPSADSWYYLASGYLDNNQIPKALEVMKKAVAVCPPGWRPSKETLATCLEYL 429

Query: 426 DGKQDVEETEKVVNLLREKDDSHPARAHDYIVGAI 457
           +GK D E  +  +N LR +    P   H+ ++  I
Sbjct: 430 EGKGDTERADDFINSLRVQ-HIFPTSVHNRLLNYI 461

The following BLAST results are available for this feature:

BLAST of CsGy1G012070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653157.1	1.0e-223	99.57	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_008442434.1	1.3e-189	87.86	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_008442448.1	7.1e-180	79.44	PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-...	[more]
XP_022140106.1	3.1e-151	71.08	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Momor...	[more]
XP_011653151.1	7.7e-150	79.05	PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g...	[more]

BLAST of CsGy1G012070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G20710.1	9.2e-73	35.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	1.4e-57	33.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	2.4e-49	43.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G28020.1	2.2e-42	31.59	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27460.1	1.3e-37	26.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy1G012070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKU6\|PP166_ARATH	1.7e-71	35.58	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
sp\|Q84JR3\|PP334_ARATH	2.6e-56	33.42	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
sp\|Q8LPS6\|PPR3_ARATH	4.4e-48	43.10	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9C7F1\|PPR61_ARATH	4.0e-41	31.59	Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis th...	[more]
sp\|Q3E911\|PP400_ARATH	2.3e-36	26.96	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy1G012070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LV44\|A0A0A0LV44_CUCSA	6.9e-224	99.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073790 PE=4 SV=1	[more]
tr\|A0A1S3B572\|A0A1S3B572_CUCME	8.5e-190	87.86	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A1S3B6G4\|A0A1S3B6G4_CUCME	4.7e-180	79.44	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
tr\|A0A0A0LSC2\|A0A0A0LSC2_CUCSA	4.9e-129	69.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073800 PE=4 SV=1	[more]
tr\|A0A2N9I6A5\|A0A2N9I6A5_FAGSY	2.3e-110	61.10	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47431 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G012070.1	CsGy1G012070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 345..368 e-value: 1.8E-6 score: 27.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 168..211 e-value: 2.9E-8 score: 33.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 135..161 e-value: 0.27 score: 11.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 345..368 e-value: 1.0E-4 score: 20.2 coord: 168..199 e-value: 1.7E-4 score: 19.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 199..229 score: 7.706
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 340..374 score: 8.342
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 164..198 score: 9.24
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 272..306 score: 6.599
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 129..163 score: 6.358
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 309..449 e-value: 4.4E-10 score: 41.6 coord: 176..308 e-value: 4.9E-15 score: 57.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 49..162 e-value: 3.8E-5 score: 25.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 312..418
None	No IPR available	PANTHER	PTHR24015:SF1625	SUBFAMILY NOT NAMED	coord: 29..442
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 29..442

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G012070	Cla019500	Watermelon (97103) v1	cgybwmB010
CsGy1G012070	Csa1G073790	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G012070	MELO3C002597	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G012070	ClCG03G005990	Watermelon (Charleston Gray)	cgybwcgB033
CsGy1G012070	CSPI01G12050	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G012070	Lsi02G007460	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G012070	CsaV3_1G012220	Cucumber (Chinese Long) v3	cgybcucB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G012070	Cucumber (Gy14) v2	cgybcgybB025
CsGy1G012070	Cucumber (Gy14) v2	cgybcgybB035
CsGy1G012070	Cucumber (Gy14) v2	cgybcgybB041
CsGy1G012070	Cucurbita maxima (Rimu)	cgybcmaB002
CsGy1G012070	Cucurbita maxima (Rimu)	cgybcmaB074
CsGy1G012070	Cucurbita maxima (Rimu)	cgybcmaB086
CsGy1G012070	Cucurbita maxima (Rimu)	cgybcmaB108
CsGy1G012070	Cucurbita maxima (Rimu)	cgybcmaB142
CsGy1G012070	Cucurbita moschata (Rifu)	cgybcmoB003
CsGy1G012070	Cucurbita moschata (Rifu)	cgybcmoB068
CsGy1G012070	Cucurbita moschata (Rifu)	cgybcmoB082
CsGy1G012070	Cucurbita moschata (Rifu)	cgybcmoB101
CsGy1G012070	Cucurbita moschata (Rifu)	cgybcmoB133
CsGy1G012070	Cucurbita pepo (Zucchini)	cgybcpeB018
CsGy1G012070	Cucurbita pepo (Zucchini)	cgybcpeB066
CsGy1G012070	Cucurbita pepo (Zucchini)	cgybcpeB070
CsGy1G012070	Cucurbita pepo (Zucchini)	cgybcpeB102
CsGy1G012070	Cucurbita pepo (Zucchini)	cgybcpeB140
CsGy1G012070	Cucumber (Chinese Long) v2	cgybcuB031
CsGy1G012070	Cucumber (Chinese Long) v2	cgybcuB040
CsGy1G012070	Bottle gourd (USVL1VR-Ls)	cgyblsiB015
CsGy1G012070	Bottle gourd (USVL1VR-Ls)	cgyblsiB046
CsGy1G012070	Melon (DHL92) v3.5.1	cgybmeB076
CsGy1G012070	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G012070	Melon (DHL92) v3.6.1	cgybmedB072
CsGy1G012070	Watermelon (Charleston Gray)	cgybwcgB010
CsGy1G012070	Watermelon (Charleston Gray)	cgybwcgB013
CsGy1G012070	Watermelon (97103) v1	cgybwmB044
CsGy1G012070	Watermelon (97103) v1	cgybwmB077
CsGy1G012070	Wild cucumber (PI 183967)	cgybcpiB028
CsGy1G012070	Wild cucumber (PI 183967)	cgybcpiB037
CsGy1G012070	Wild cucumber (PI 183967)	cgybcpiB044
CsGy1G012070	Silver-seed gourd	carcgybB0161
CsGy1G012070	Silver-seed gourd	carcgybB0181
CsGy1G012070	Silver-seed gourd	carcgybB0638
CsGy1G012070	Silver-seed gourd	carcgybB0936
CsGy1G012070	Cucumber (Chinese Long) v3	cgybcucB034
CsGy1G012070	Cucumber (Chinese Long) v3	cgybcucB045
CsGy1G012070	Watermelon (97103) v2	cgybwmbB002
CsGy1G012070	Watermelon (97103) v2	cgybwmbB024
CsGy1G012070	Watermelon (97103) v2	cgybwmbB032
CsGy1G012070	Wax gourd	cgybwgoB020
CsGy1G012070	Wax gourd	cgybwgoB035
CsGy1G012070	Wax gourd	cgybwgoB070