Lsi02G002080 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G002080
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLipid transfer protein
Locationchr02 : 1731472 .. 1731744 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCATCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCAGTGCAACTGAGTTCCTGTGTTAGTGCAATCACATCTTCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

mRNA sequence

ATGAAGGCATCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCAGTGCAACTGAGTTCCTGTGTTAGTGCAATCACATCTTCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

Coding sequence (CDS)

ATGAAGGCATCACAGATTGCACTAAGTATCTTAATGATGTTTATCATGGTGGAGATTTCAATGGCAGTGACATGCAGTCCAGTGCAACTGAGTTCCTGTGTTAGTGCAATCACATCTTCAGTTCCACCTTCTAAGCTCTGCTGTTCTAAGATTAAGGAACAGAAACCCTGCCTCTGCAAGTACATGCAGAACCCCACTCTAAAGAAGTTTGTGGCCTCTCCCAATGCCAGGAAAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

Protein sequence

MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCGTPFPKC
Homology
[Close]
BLAST of Lsi02G002080 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.0e-18
Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 1 

Query: 23 VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANT 82
          VTCSPVQLS C+  I S  P    CC K++EQ+PCLC Y++NP+L+++V SPNARK+A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 83 CGTPFPKC 91
          CG P P+C
Sbjct: 61 CGVPVPQC 68

[Close]
BLAST of Lsi02G002080 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-17
Identity = 43/93 (46.24%), Postives = 64/93 (68.82%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIMVEI---SMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPC 60
          MK S +   +++   ++++   + AVTC+P +LSSCV AIT    PS  CCSK+K Q+PC
Sbjct: 7  MKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPC 66

Query: 61 LCKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          LC Y++NP+LK++V SP A+KV + CG  +P C
Sbjct: 67 LCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]
BLAST of Lsi02G002080 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.1e-16
Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 1 

Query: 24 TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTC 83
          TCS VQLS C++AIT + PPS  CC+K+KEQKPCLC Y+++P LK +V SP ARK A++C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 84 GTPFPKC 91
          G    KC
Sbjct: 62 GVAL-KC 67

[Close]
BLAST of Lsi02G002080 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-10
Identity = 31/91 (34.07%), Postives = 51/91 (56.04%), Query Frame = 1 

Query: 5   QIALSILMMFIMV-----EISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLC 64
           + A++++M+ ++      +      C P QL+ C SAI     PS  CC  ++ Q+ CLC
Sbjct: 12  EAAVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLC 71

Query: 65  KYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
           +Y+++P    +V+SP+AR   N CG P P C
Sbjct: 72  QYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]
BLAST of Lsi02G002080 vs. Swiss-Prot
Match: NLT2P_WHEAT (Non-specific lipid-transfer protein 2P OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1 

Query: 25 CSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANTCG 84
          C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 85 TPFPKC 91
             P C
Sbjct: 62 LAVPHC 67

[Close]
BLAST of Lsi02G002080 vs. TrEMBL
Match: A0A0A0LVT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042560 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.5e-39
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI++MF+ VEI+MAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          YMQNPTLKKFVASPNARKVANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]
BLAST of Lsi02G002080 vs. TrEMBL
Match: B7FM99_MEDTR (Chitinase / Hevein / PR-4 / Wheatwin2 OS=Medicago truncatula GN=MTR_6g082480 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 7.2e-31
Identity = 70/92 (76.09%), Postives = 83/92 (90.22%), Query Frame = 1 

Query: 1  MKASQIALS--ILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKASQIA+   ++++ I V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQ+PCL
Sbjct: 1  MKASQIAICTFLVLLLINVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          C+YM+NP L+KFV +PNARKVANTCGTPFP+C
Sbjct: 61 CQYMKNPNLRKFVNTPNARKVANTCGTPFPRC 92

[Close]
BLAST of Lsi02G002080 vs. TrEMBL
Match: V7C3M6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G154200g PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.2e-30
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIM--VEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKA+ IAL  L++ ++  V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          CKY++NP LKKFV SPNARKVA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]
BLAST of Lsi02G002080 vs. TrEMBL
Match: I3S1H2_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-30
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 1 

Query: 1  MKASQIALS--ILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKASQIA+   ++++ I V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQ+PCL
Sbjct: 1  MKASQIAICTFLVLLLINVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          C+YM+NP L KFV +PNARKVANTCGTPFP+C
Sbjct: 61 CQYMKNPNLTKFVNTPNARKVANTCGTPFPRC 92

[Close]
BLAST of Lsi02G002080 vs. TrEMBL
Match: A0A151R929_CAJCA (Putative non-specific lipid-transfer protein AKCS9 (Fragment) OS=Cajanus cajan GN=KK1_039546 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.7e-30
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIM--VEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKAS IAL  L++ ++  V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 3  MKASHIALCTLVVLLVAQVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 62

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          C+Y++NP LKKFV SPNAR+VA TCGTPFP+C
Sbjct: 63 CQYLKNPNLKKFVDSPNARRVARTCGTPFPRC 94

[Close]
BLAST of Lsi02G002080 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 2.6e-24
Identity = 50/87 (57.47%), Postives = 70/87 (80.46%), Query Frame = 1 

Query: 4  SQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQ 63
          S  AL+ +++ I+   + AVTCSP+QLS C +AITSS PPS LCC+K+KEQ+PCLC YM+
Sbjct: 10 SLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMR 69

Query: 64 NPTLKKFVASPNARKVANTCGTPFPKC 91
          NP+L++FV++PNARKV+ +C  P P+C
Sbjct: 70 NPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]
BLAST of Lsi02G002080 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 7.7e-24
Identity = 49/90 (54.44%), Postives = 72/90 (80.00%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          M  S +AL+  ++ + V ++  VTCSP+QL+SC +A+TSS PPS+ CC+K++EQ+PCLC 
Sbjct: 5  MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          YM+NPTL+++V+SPNARKV+N+C  P P C
Sbjct: 65 YMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]
BLAST of Lsi02G002080 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-16
Identity = 35/68 (51.47%), Postives = 47/68 (69.12%), Query Frame = 1 

Query: 23  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANT 82
           VTC  VQLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA+K   T
Sbjct: 36  VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLAT 95

Query: 83  CGTPFPKC 91
           CG P+P C
Sbjct: 96  CGVPYPTC 103

[Close]
BLAST of Lsi02G002080 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 80.5 bits (197), Expect = 5.9e-16
Identity = 35/68 (51.47%), Postives = 44/68 (64.71%), Query Frame = 1 

Query: 23  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVASPNARKVANT 82
           VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNARK    
Sbjct: 36  VTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTLAA 95

Query: 83  CGTPFPKC 91
           C   +P C
Sbjct: 96  CDVAYPTC 103

[Close]
BLAST of Lsi02G002080 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15
Identity = 37/85 (43.53%), Postives = 56/85 (65.88%), Query Frame = 1 

Query: 9  SILMMFIMVE---ISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNP 68
          +IL++ I+ +   ++    C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP
Sbjct: 14 TILLILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNP 73

Query: 69 TLKKFVASPNARKVANTCGTPFPKC 91
            K F+ SPNA+ +A  C  P+PKC
Sbjct: 74 NFKSFLNSPNAKIIATDCHCPYPKC 98

[Close]
BLAST of Lsi02G002080 vs. NCBI nr
Match: gi|449439421|ref|XP_004137484.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 7.9e-39
Identity = 85/90 (94.44%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI++MF+ VEI+MAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          YMQNPTLKKFVASPNARKVANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]
BLAST of Lsi02G002080 vs. NCBI nr
Match: gi|659066780|ref|XP_008460998.1| (PREDICTED: non-specific lipid-transfer protein 2 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 5.1e-38
Identity = 83/90 (92.22%), Postives = 89/90 (98.89%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIALSI++MF+MVEISMAVTCSPVQLSSCVSAITSSVPPS LCCSKIKEQ+PCLCK
Sbjct: 1  MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          YMQNPTLKKFVASPNA+KVA+TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNAKKVASTCGTPFPKC 90

[Close]
BLAST of Lsi02G002080 vs. NCBI nr
Match: gi|357500235|ref|XP_003620406.1| (Chitinase / Hevein / PR-4 / Wheatwin2 [Medicago truncatula])

HSP 1 Score: 141.0 bits (354), Expect = 1.0e-30
Identity = 70/92 (76.09%), Postives = 83/92 (90.22%), Query Frame = 1 

Query: 1  MKASQIALS--ILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKASQIA+   ++++ I V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQ+PCL
Sbjct: 1  MKASQIAICTFLVLLLINVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          C+YM+NP L+KFV +PNARKVANTCGTPFP+C
Sbjct: 61 CQYMKNPNLRKFVNTPNARKVANTCGTPFPRC 92

[Close]
BLAST of Lsi02G002080 vs. NCBI nr
Match: gi|593704703|ref|XP_007152725.1| (hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris])

HSP 1 Score: 140.2 bits (352), Expect = 1.8e-30
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 1 

Query: 1  MKASQIALSILMMFIM--VEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKA+ IAL  L++ ++  V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          CKY++NP LKKFV SPNARKVA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]
BLAST of Lsi02G002080 vs. NCBI nr
Match: gi|388492096|gb|AFK34114.1| (unknown [Medicago truncatula])

HSP 1 Score: 139.8 bits (351), Expect = 2.3e-30
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 1 

Query: 1  MKASQIALS--ILMMFIMVEISMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKASQIA+   ++++ I V++SMAVTCSPVQLSSCVSAITSS PPS LCCSKIKEQ+PCL
Sbjct: 1  MKASQIAICTFLVLLLINVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQRPCL 60

Query: 61 CKYMQNPTLKKFVASPNARKVANTCGTPFPKC 91
          C+YM+NP L KFV +PNARKVANTCGTPFP+C
Sbjct: 61 CQYMKNPNLTKFVNTPNARKVANTCGTPFPRC 92

The following BLAST results are available for this feature:
BLAST of Lsi02G002080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTP2_PRUAR2.0e-1857.35Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1[more]
NLTP_VIGUN1.0e-1746.24Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=... [more]
NLTP2_APIGA1.1e-1659.70Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=... [more]
NLTP2_HORVU4.5e-1034.07Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=... [more]
NLT2P_WHEAT1.0e-0940.91Non-specific lipid-transfer protein 2P OS=Triticum aestivum PE=1 SV=1[more]
BLAST of Lsi02G002080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVT5_CUCSA5.5e-3994.44Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042560 PE=4 SV=1[more]
B7FM99_MEDTR7.2e-3176.09Chitinase / Hevein / PR-4 / Wheatwin2 OS=Medicago truncatula GN=MTR_6g082480 PE=... [more]
V7C3M6_PHAVU1.2e-3077.17Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G154200g PE=4 SV=1[more]
I3S1H2_MEDTR1.6e-3076.09Uncharacterized protein OS=Medicago truncatula PE=2 SV=1[more]
A0A151R929_CAJCA4.7e-3076.09Putative non-specific lipid-transfer protein AKCS9 (Fragment) OS=Cajanus cajan G... [more]
BLAST of Lsi02G002080 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18280.12.6e-2457.47 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G48750.17.7e-2454.44 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38170.11.2e-1651.47 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G38160.15.9e-1651.47 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G73780.11.3e-1543.53 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Lsi02G002080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449439421|ref|XP_004137484.1|7.9e-3994.44PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis sativus][more]
gi|659066780|ref|XP_008460998.1|5.1e-3892.22PREDICTED: non-specific lipid-transfer protein 2 [Cucumis melo][more]
gi|357500235|ref|XP_003620406.1|1.0e-3076.09Chitinase / Hevein / PR-4 / Wheatwin2 [Medicago truncatula][more]
gi|593704703|ref|XP_007152725.1|1.8e-3077.17hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris][more]
gi|388492096|gb|AFK34114.1|2.3e-3076.09unknown [Medicago truncatula][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006508 proteolysis
biological_process GO:0008152 metabolic process
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003824 catalytic activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G002080.1Lsi02G002080.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 20..86
score: 3.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 24..90
score: 5.95
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 24..90
score: 6.0
NoneNo IPR availablePANTHERPTHR33214FAMILY NOT NAMEDcoord: 6..90
score: 4.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi02G002080Csa1G042560Cucumber (Chinese Long) v2culsiB022
Lsi02G002080CSPI01G03990Wild cucumber (PI 183967)cpilsiB025
Lsi02G002080CSPI01G06960Wild cucumber (PI 183967)cpilsiB021
Lsi02G002080Cucsa.111210Cucumber (Gy14) v1cgylsiB149
Lsi02G002080Cucsa.121700Cucumber (Gy14) v1cgylsiB181
Lsi02G002080CmaCh11G002880Cucurbita maxima (Rimu)cmalsiB106
Lsi02G002080CmaCh18G000500Cucurbita maxima (Rimu)cmalsiB370
Lsi02G002080CmoCh13G010480Cucurbita moschata (Rifu)cmolsiB198
Lsi02G002080CmoCh11G002910Cucurbita moschata (Rifu)cmolsiB094
Lsi02G002080Cla018480Watermelon (97103) v1lsiwmB212
Lsi02G002080Cla018957Watermelon (97103) v1lsiwmB223
Lsi02G002080ClCG04G010940Watermelon (Charleston Gray)lsiwcgB192
Lsi02G002080Cla97C04G077720Watermelon (97103) v2lsiwmbB184
Lsi02G002080Bhi08G001048Wax gourdlsiwgoB238
Lsi02G002080Bhi01G002683Wax gourdlsiwgoB222
Lsi02G002080Cp4.1LG04g13810Cucurbita pepo (Zucchini)cpelsiB542
Lsi02G002080Cp4.1LG20g01380Cucurbita pepo (Zucchini)cpelsiB418
Lsi02G002080Cp4.1LG09g11250Cucurbita pepo (Zucchini)cpelsiB026
Lsi02G002080CsGy1G006790Cucumber (Gy14) v2cgyblsiB018
Lsi02G002080Carg04828Silver-seed gourdcarlsiB353
Lsi02G002080Carg09127Silver-seed gourdcarlsiB538
Lsi02G002080CsaV3_1G004000Cucumber (Chinese Long) v3cuclsiB024
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi02G002080Lsi06G013150Bottle gourd (USVL1VR-Ls)lsilsiB113
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi02G002080Cucurbita maxima (Rimu)cmalsiB208
Lsi02G002080Cucurbita moschata (Rifu)cmolsiB040
Lsi02G002080Cucurbita moschata (Rifu)cmolsiB356
Lsi02G002080Cucurbita pepo (Zucchini)cpelsiB294
Lsi02G002080Cucumber (Chinese Long) v2culsiB025
Lsi02G002080Melon (DHL92) v3.5.1lsimeB179
Lsi02G002080Melon (DHL92) v3.5.1lsimeB209
Lsi02G002080Watermelon (Charleston Gray)lsiwcgB201
Lsi02G002080Cucumber (Gy14) v2cgyblsiB021
Lsi02G002080Melon (DHL92) v3.6.1lsimedB189
Lsi02G002080Melon (DHL92) v3.6.1lsimedB216
Lsi02G002080Silver-seed gourdcarlsiB467
Lsi02G002080Silver-seed gourdcarlsiB724
Lsi02G002080Cucumber (Chinese Long) v3cuclsiB022
Lsi02G002080Watermelon (97103) v2lsiwmbB195