CmaCh18G000500 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G000500
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Lipid transfer protein
Location	Cma_Chr18 : 205950 .. 206222 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCATCACAGATTGCTGTAAGCATCATGGTAATGTTTATGATGGTGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATCAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

mRNA sequence

ATGAAGGCATCACAGATTGCTGTAAGCATCATGGTAATGTTTATGATGGTGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATCAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

Coding sequence (CDS)

ATGAAGGCATCACAGATTGCTGTAAGCATCATGGTAATGTTTATGATGGTGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATCAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACCTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG

Protein sequence

MKASQIAVSIMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC

Homology

[Close]

BLAST of CmaCh18G000500 vs. Swiss-Prot
Match: NLTP2_PRUAR (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.6e-18
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 1


Query: 23 VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANT 82
          VTCSPVQLS C+  I S  P    CC K++EQ+PCLC Y++NP+L+++V+SPNAR++A+ 
Sbjct: 1  VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASN 60

Query: 83 CGTPFPKC 91
          CG P P+C
Sbjct: 61 CGVPVPQC 68

[Close]

BLAST of CmaCh18G000500 vs. Swiss-Prot
Match: NLTP_VIGUN (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 3.5e-18
Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEV---CVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPC 60
          MK S +   ++V   +++V     AVTC+P +LSSCV AIT    PS  CCSK+K Q+PC
Sbjct: 7  MKMSVVCAVVVVALFLIDVGPVAEAVTCNPTELSSCVPAITGGSKPSSTCCSKLKVQEPC 66

Query: 61 LCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          LC Y++NP+LK++V+SP A++V + CG  +P C
Sbjct: 67 LCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

[Close]

BLAST of CmaCh18G000500 vs. Swiss-Prot
Match: NLTP2_APIGA (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 6.5e-17
Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 1


Query: 24 TCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTC 83
          TCS VQLS C++AIT + PPS  CC+K+KEQKPCLC Y+++P LK +V+SP AR+ A++C
Sbjct: 2  TCSAVQLSPCLAAITKNTPPSAACCNKLKEQKPCLCGYLKDPNLKNYVNSPGARKTASSC 61

Query: 84 GTPFPKC 91
          G    KC
Sbjct: 62 GVAL-KC 67

[Close]

BLAST of CmaCh18G000500 vs. Swiss-Prot
Match: NLTP2_HORVU (Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.5e-10
Identity = 34/89 (38.20%), Postives = 47/89 (52.81%), Query Frame = 1


Query: 9   SIMVMFMMVEVCVA-------VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKY 68
           ++ VM +MV    A         C P QL+ C SAI     PS  CC  ++ Q+ CLC+Y
Sbjct: 14  AVAVMMVMVVTLAAGADAGAGAACEPAQLAVCASAILGGTKPSGECCGNLRAQQGCLCQY 73

Query: 69  MQNPTLKKFVDSPNARRVANTCGTPFPKC 91
           +++P    +V SP+AR   N CG P P C
Sbjct: 74  VKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

[Close]

BLAST of CmaCh18G000500 vs. Swiss-Prot
Match: NLT2P_WHEAT (Non-specific lipid-transfer protein 2P OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09
Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 1


Query: 25 CSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTCG 84
          C   QL+ C SAI S   PS  CC  ++ Q+PC C+Y ++PT  +++ SP+AR    +CG
Sbjct: 2  CQASQLAVCASAILSGAKPSGECCGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCG 61

Query: 85 TPFPKC 91
             P C
Sbjct: 62 LAVPHC 67

[Close]

BLAST of CmaCh18G000500 vs. TrEMBL
Match: A0A0A0LVT5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042560 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-37
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+SI+VMFM VE+ +AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          YMQNPTLKKFV SPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of CmaCh18G000500 vs. TrEMBL
Match: A0A151R929_CAJCA (Putative non-specific lipid-transfer protein AKCS9 (Fragment) OS=Cajanus cajan GN=KK1_039546 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.6e-30
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMM--VEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKAS IA+  +V+ ++  V+V +AVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 3  MKASHIALCTLVVLLVAQVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 62

Query: 61 CKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          C+Y++NP LKKFVDSPNARRVA TCGTPFP+C
Sbjct: 63 CQYLKNPNLKKFVDSPNARRVARTCGTPFPRC 94

[Close]

BLAST of CmaCh18G000500 vs. TrEMBL
Match: V7C3M6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G154200g PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.7e-30
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEVCV--AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKA+ IA+  +V+ ++ EV V  AVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          CKY++NP LKKFVDSPNAR+VA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]

BLAST of CmaCh18G000500 vs. TrEMBL
Match: A0A0B2SJW0_GLYSO (Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_027180 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.1e-30
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMV---EVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPC 60
          MKAS+IA+  +V+ + V   +V  AVTCSPVQLS+CVSAITSS PPS LCCSKIKEQKPC
Sbjct: 1  MKASRIALFTLVVLLFVAEVQVSKAVTCSPVQLSACVSAITSSTPPSNLCCSKIKEQKPC 60

Query: 61 LCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          LC+Y++NP LKKFVDSPNARRVANTCGTPFP+C
Sbjct: 61 LCQYLKNPNLKKFVDSPNARRVANTCGTPFPRC 93

[Close]

BLAST of CmaCh18G000500 vs. TrEMBL
Match: I1KJ10_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G096700 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.1e-30
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMV---EVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPC 60
          MKAS+IA+  +V+ + V   +V  AVTCSPVQLS+CVSAITSS PPS LCCSKIKEQKPC
Sbjct: 1  MKASRIALFTLVVLLFVAEVQVSKAVTCSPVQLSACVSAITSSTPPSNLCCSKIKEQKPC 60

Query: 61 LCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          LC+Y++NP LKKFVDSPNARRVANTCGTPFP+C
Sbjct: 61 LCQYLKNPNLKKFVDSPNARRVANTCGTPFPRC 93

[Close]

BLAST of CmaCh18G000500 vs. TAIR10
Match: AT1G48750.1 (AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 2.9e-23
Identity = 48/90 (53.33%), Postives = 70/90 (77.78%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          M  S +A++  ++ + V V   VTCSP+QL+SC +A+TSS PPS+ CC+K++EQ+PCLC 
Sbjct: 5  MWVSVLALAAAILLLTVPVAEGVTCSPMQLASCAAAMTSSSPPSEACCTKLREQQPCLCG 64

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          YM+NPTL+++V SPNAR+V+N+C  P P C
Sbjct: 65 YMRNPTLRQYVSSPNARKVSNSCKIPSPSC 94

[Close]

BLAST of CmaCh18G000500 vs. TAIR10
Match: AT3G18280.1 (AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 104.0 bits (258), Expect = 5.0e-23
Identity = 47/87 (54.02%), Postives = 68/87 (78.16%), Query Frame = 1


Query: 4  SQIAVSIMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQ 63
          S  A++ +++ ++     AVTCSP+QLS C +AITSS PPS LCC+K+KEQ+PCLC YM+
Sbjct: 10 SLFALAAVLLMILAPAAEAVTCSPMQLSPCATAITSSSPPSALCCAKLKEQRPCLCGYMR 69

Query: 64 NPTLKKFVDSPNARRVANTCGTPFPKC 91
          NP+L++FV +PNAR+V+ +C  P P+C
Sbjct: 70 NPSLRRFVSTPNARKVSKSCKLPIPRC 96

[Close]

BLAST of CmaCh18G000500 vs. TAIR10
Match: AT5G38170.1 (AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 2.6e-16
Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 1


Query: 23  VTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANT 82
           VTC  VQLSSC + + + VPPS  CC K+KEQ+PC C Y+++P   ++V S NA++   T
Sbjct: 36  VTCDAVQLSSCATPMLTGVPPSTECCGKLKEQQPCFCTYIKDPRYSQYVGSANAKKTLAT 95

Query: 83  CGTPFPKC 91
           CG P+P C
Sbjct: 96  CGVPYPTC 103

[Close]

BLAST of CmaCh18G000500 vs. TAIR10
Match: AT1G73780.1 (AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 80.1 bits (196), Expect = 7.7e-16
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 1


Query: 10 IMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKK 69
          I+++     V     C+P QLS C+  I     PS LCCSK+KEQ+ C+C+Y++NP  K 
Sbjct: 18 ILIVAQENRVAAVDPCNPAQLSPCLETIMKGSEPSDLCCSKVKEQQHCICQYLKNPNFKS 77

Query: 70 FVDSPNARRVANTCGTPFPKC 91
          F++SPNA+ +A  C  P+PKC
Sbjct: 78 FLNSPNAKIIATDCHCPYPKC 98

[Close]

BLAST of CmaCh18G000500 vs. TAIR10
Match: AT5G38160.1 (AT5G38160.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 79.7 bits (195), Expect = 1.0e-15
Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 1


Query: 21  VAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVA 80
           V VTC   QLSSCV+A+++  PPS  CC K+KE + CLC Y+QNP    +V SPNAR+  
Sbjct: 34  VNVTCDATQLSSCVTAVSTGAPPSTDCCGKLKEHETCLCTYIQNPLYSSYVTSPNARKTL 93

Query: 81  NTCGTPFPKC 91
             C   +P C
Sbjct: 94  AACDVAYPTC 103

[Close]

BLAST of CmaCh18G000500 vs. NCBI nr
Match: gi|449439421|ref|XP_004137484.1| (PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-37
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+SI+VMFM VE+ +AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK
Sbjct: 1  MKASQIALSIIVMFMTVEITMAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          YMQNPTLKKFV SPNAR+VANTCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNARKVANTCGTPFPKC 90

[Close]

BLAST of CmaCh18G000500 vs. NCBI nr
Match: gi|659066780|ref|XP_008460998.1| (PREDICTED: non-specific lipid-transfer protein 2 [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 3.7e-36
Identity = 79/90 (87.78%), Postives = 87/90 (96.67%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCK 60
          MKASQIA+SI+VMFMMVE+ +AVTCSPVQLSSCVSAITSSVPPS LCCSKIKEQ+PCLCK
Sbjct: 1  MKASQIALSIIVMFMMVEISMAVTCSPVQLSSCVSAITSSVPPSSLCCSKIKEQRPCLCK 60

Query: 61 YMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          YMQNPTLKKFV SPNA++VA+TCGTPFPKC
Sbjct: 61 YMQNPTLKKFVASPNAKKVASTCGTPFPKC 90

[Close]

BLAST of CmaCh18G000500 vs. NCBI nr
Match: gi|1012327433|gb|KYP39148.1| (putative non-specific lipid-transfer protein AKCS9, partial [Cajanus cajan])

HSP 1 Score: 138.7 bits (348), Expect = 5.2e-30
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMM--VEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKAS IA+  +V+ ++  V+V +AVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 3  MKASHIALCTLVVLLVAQVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 62

Query: 61 CKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          C+Y++NP LKKFVDSPNARRVA TCGTPFP+C
Sbjct: 63 CQYLKNPNLKKFVDSPNARRVARTCGTPFPRC 94

[Close]

BLAST of CmaCh18G000500 vs. NCBI nr
Match: gi|593704703|ref|XP_007152725.1| (hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris])

HSP 1 Score: 138.3 bits (347), Expect = 6.7e-30
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMVEVCV--AVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCL 60
          MKA+ IA+  +V+ ++ EV V  AVTCSPVQLSSCVSAITSS PPS LCCSKIKEQKPCL
Sbjct: 1  MKAAHIALCTLVVLLVAEVQVSMAVTCSPVQLSSCVSAITSSTPPSNLCCSKIKEQKPCL 60

Query: 61 CKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          CKY++NP LKKFVDSPNAR+VA+TCGTPFP+C
Sbjct: 61 CKYLKNPNLKKFVDSPNARKVASTCGTPFPRC 92

[Close]

BLAST of CmaCh18G000500 vs. NCBI nr
Match: gi|734428064|gb|KHN44569.1| (Putative non-specific lipid-transfer protein AKCS9 [Glycine soja])

HSP 1 Score: 137.9 bits (346), Expect = 8.8e-30
Identity = 70/93 (75.27%), Postives = 81/93 (87.10%), Query Frame = 1


Query: 1  MKASQIAVSIMVMFMMV---EVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPC 60
          MKAS+IA+  +V+ + V   +V  AVTCSPVQLS+CVSAITSS PPS LCCSKIKEQKPC
Sbjct: 1  MKASRIALFTLVVLLFVAEVQVSKAVTCSPVQLSACVSAITSSTPPSNLCCSKIKEQKPC 60

Query: 61 LCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC 91
          LC+Y++NP LKKFVDSPNARRVANTCGTPFP+C
Sbjct: 61 LCQYLKNPNLKKFVDSPNARRVANTCGTPFPRC 93

The following BLAST results are available for this feature:

BLAST of CmaCh18G000500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTP2_PRUAR	1.6e-18	55.88	Non-specific lipid-transfer protein 2 OS=Prunus armeniaca PE=1 SV=1	[more]
NLTP_VIGUN	3.5e-18	47.31	Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=...	[more]
NLTP2_APIGA	6.5e-17	58.21	Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum PE=1 SV=...	[more]
NLTP2_HORVU	4.5e-10	38.20	Probable non-specific lipid-transfer protein OS=Hordeum vulgare GN=LTP2 PE=2 SV=...	[more]
NLT2P_WHEAT	1.0e-09	40.91	Non-specific lipid-transfer protein 2P OS=Triticum aestivum PE=1 SV=1	[more]

BLAST of CmaCh18G000500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVT5_CUCSA	1.8e-37	91.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042560 PE=4 SV=1	[more]
A0A151R929_CAJCA	3.6e-30	76.09	Putative non-specific lipid-transfer protein AKCS9 (Fragment) OS=Cajanus cajan G...	[more]
V7C3M6_PHAVU	4.7e-30	76.09	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G154200g PE=4 SV=1	[more]
A0A0B2SJW0_GLYSO	6.1e-30	75.27	Putative non-specific lipid-transfer protein AKCS9 OS=Glycine soja GN=glysoja_02...	[more]
I1KJ10_SOYBN	6.1e-30	75.27	Uncharacterized protein OS=Glycine max GN=GLYMA_07G096700 PE=4 SV=1	[more]

BLAST of CmaCh18G000500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G48750.1	2.9e-23	53.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G18280.1	5.0e-23	54.02	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G38170.1	2.6e-16	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G73780.1	7.7e-16	44.44	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G38160.1	1.0e-15	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CmaCh18G000500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439421\|ref\|XP_004137484.1\|	2.6e-37	91.11	PREDICTED: non-specific lipid-transfer protein 2-like [Cucumis sativus]	[more]
gi\|659066780\|ref\|XP_008460998.1\|	3.7e-36	87.78	PREDICTED: non-specific lipid-transfer protein 2 [Cucumis melo]	[more]
gi\|1012327433\|gb\|KYP39148.1\|	5.2e-30	76.09	putative non-specific lipid-transfer protein AKCS9, partial [Cajanus cajan]	[more]
gi\|593704703\|ref\|XP_007152725.1\|	6.7e-30	76.09	hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris]	[more]
gi\|734428064\|gb\|KHN44569.1\|	8.8e-30	75.27	Putative non-specific lipid-transfer protein AKCS9 [Glycine soja]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G000500.1	CmaCh18G000500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 19..86 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 25..90 score: 0.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 24..90 score: 1.89
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 24..90 score: 2.4
None	No IPR available	PANTHER	PTHR33214	FAMILY NOT NAMED	coord: 1..90 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G000500	Cucsa.111210	Cucumber (Gy14) v1	cgycmaB0267
CmaCh18G000500	Cucsa.121700	Cucumber (Gy14) v1	cgycmaB0318
CmaCh18G000500	Cla018957	Watermelon (97103) v1	cmawmB404
CmaCh18G000500	Cla018480	Watermelon (97103) v1	cmawmB396
CmaCh18G000500	Csa1G042560	Cucumber (Chinese Long) v2	cmacuB390
CmaCh18G000500	ClCG04G010940	Watermelon (Charleston Gray)	cmawcgB363
CmaCh18G000500	CSPI01G06960	Wild cucumber (PI 183967)	cmacpiB394
CmaCh18G000500	CSPI01G03990	Wild cucumber (PI 183967)	cmacpiB397
CmaCh18G000500	CmoCh11G002910	Cucurbita moschata (Rifu)	cmacmoB389
CmaCh18G000500	CmoCh13G010480	Cucurbita moschata (Rifu)	cmacmoB399
CmaCh18G000500	Lsi02G002080	Bottle gourd (USVL1VR-Ls)	cmalsiB370
CmaCh18G000500	Lsi06G013150	Bottle gourd (USVL1VR-Ls)	cmalsiB391
CmaCh18G000500	Cp4.1LG20g01380	Cucurbita pepo (Zucchini)	cmacpeB439
CmaCh18G000500	Cp4.1LG04g13810	Cucurbita pepo (Zucchini)	cmacpeB452
CmaCh18G000500	Cp4.1LG09g11250	Cucurbita pepo (Zucchini)	cmacpeB416
CmaCh18G000500	CsaV3_1G004000	Cucumber (Chinese Long) v3	cmacucB0466
CmaCh18G000500	Cla97C04G077720	Watermelon (97103) v2	cmawmbB422
CmaCh18G000500	Bhi08G001048	Wax gourd	cmawgoB0520
CmaCh18G000500	CsGy1G006790	Cucumber (Gy14) v2	cgybcmaB085
CmaCh18G000500	Carg09127	Silver-seed gourd	carcmaB0834
CmaCh18G000500	Carg04828	Silver-seed gourd	carcmaB0541

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G000500	CmaCh11G002880	Cucurbita maxima (Rimu)	cmacmaB139

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G000500	Cucumber (Chinese Long) v3	cmacucB0464
CmaCh18G000500	Watermelon (97103) v2	cmawmbB432
CmaCh18G000500	Cucurbita maxima (Rimu)	cmacmaB100
CmaCh18G000500	Cucurbita maxima (Rimu)	cmacmaB217
CmaCh18G000500	Cucurbita moschata (Rifu)	cmacmoB408
CmaCh18G000500	Cucumber (Chinese Long) v2	cmacuB393
CmaCh18G000500	Melon (DHL92) v3.5.1	cmameB365
CmaCh18G000500	Melon (DHL92) v3.5.1	cmameB372
CmaCh18G000500	Watermelon (Charleston Gray)	cmawcgB371
CmaCh18G000500	Cucumber (Gy14) v2	cgybcmaB088
CmaCh18G000500	Melon (DHL92) v3.6.1	cmamedB424
CmaCh18G000500	Melon (DHL92) v3.6.1	cmamedB429
CmaCh18G000500	Silver-seed gourd	carcmaB0722