Lsi02G001410 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGACCACTCCATCCACAATCAAATGGAGACTTAGAGATTGGACTTTTTGCTTCTTAGCTTCAACATTTCCTTTAGGTATAACCCTTTTTTTCTCCCAATATCAATCACTTTCCACTTCTCTTTCTTATGTTCATAGTAAGTTTTTGTCTTATCTTCAACAGATAATGAACCAAACAAATACTTCACTTCAACACCACCATCTCCAATGCCAATAACAAATGTCAATTTCAACACGTCGAAAGGTAAAGAGAATAGGAAGAAGATGTCGAGACAGAGAAAGCACTCCTCGCCACAAGCTAAAGATGTTGTTGTTATGAACAAGACGACAGTGACGACGACAGATGATTCGAGTTGGCCACAGTTTGAAGATGAAGACTACATTGTCTTCTGTTTCAAAGAAGATGGAGCATTTGATGTTATAAAGAATGGGAATAATTCAGAGACTTCCCATTGCATTGATTTGGTTTCAACAAGTTCAAGACCAGTTAGTAGGAAGGTTTCATTATAGAACTTGATATTCTTATTGTCATTCATATGATATGATTCTAAAAGGAAAGATAAAAGAAATATCTCTCTTTCTCTTAACAGCTTAATTATAGTGAAAATGATAAAACAGCCAAAACATACAACAATGAGAAGAAGATCAATGGAGGTCACATTAGATCAGCTCAAATGGTACATAATCTTTACCATTCATTTATCTTTCCATAATCACAAATGTGAAGATTTACTGAGCTGAGTTGTAGGAGGATGAAGGGGAAGAAATAGAGAATACTTACATGGATAAAGAAGAGAACAGAATGGCTAATCACAATGAGGTGATCGATGACCATCCAATCGTGGCGGTGCCTACTGAATCAAGTGACTCGAATCATTCAGATGTCAGCAACGGCTCCTTCGCGTTTCCTGTGTAAGCACCCTCCCAATAATATTAATGATATAAAGGAAAGAGATAGGGAAAATGTTATTAAGATTGTAGATGAATTCTAATACTTGGTGAGACAATGTAGGTTGGGATGGGATTGGAGTGGAAGCCCTGTGCAAATGCCAAAATCAAAAGGTTTGCAGCTGAGAAAGCACAAGGTGCGGTGTGTAGGATTCCAGTACTGTTGTAAATTCTGAAACAGAAGCTGAAATTAGGATTTCATTGATTTTAATGTTATTCAAATCACAAATGAGATTCGACTTTCGACTTTGTTTCGAATGACGATTACAAGGGCATATTTTTCTGTTAATCTATGAAATTCTTCTGTG CAAAATGACCACTCCATCCACAATCAAATGGAGACTTAGAGATTGGACTTTTTGCTTCTTAGCTTCAACATTTCCTTTAGGTATAACCCTTTTTTTCTCCCAATATCAATCACTTTCCACTTCTCTTTCTTATGTTCATAATAATGAACCAAACAAATACTTCACTTCAACACCACCATCTCCAATGCCAATAACAAATGTCAATTTCAACACGTCGAAAGGTAAAGAGAATAGGAAGAAGATGTCGAGACAGAGAAAGCACTCCTCGCCACAAGCTAAAGATGTTGTTGTTATGAACAAGACGACAGTGACGACGACAGATGATTCGAGTTGGCCACAGTTTGAAGATGAAGACTACATTGTCTTCTGTTTCAAAGAAGATGGAGCATTTGATGTTATAAAGAATGGGAATAATTCAGAGACTTCCCATTGCATTGATTTGGTTTCAACAAGTTCAAGACCAGTTAGTAGGAAGCTTAATTATAGTGAAAATGATAAAACAGCCAAAACATACAACAATGAGAAGAAGATCAATGGAGGTCACATTAGATCAGCTCAAATGGAGGATGAAGGGGAAGAAATAGAGAATACTTACATGGATAAAGAAGAGAACAGAATGGCTAATCACAATGAGGTGATCGATGACCATCCAATCGTGGCGGTGCCTACTGAATCAAGTGACTCGAATCATTCAGATGTCAGCAACGGCTCCTTCGCGTTTCCTGTTGGGATGGGATTGGAGTGGAAGCCCTGTGCAAATGCCAAAATCAAAAGGTTTGCAGCTGAGAAAGCACAAGGTGCGGTGTGTAGGATTCCAGTACTGTTGTAAATTCTGAAACAGAAGCTGAAATTAGGATTTCATTGATTTTAATGTTATTCAAATCACAAATGAGATTCGACTTTCGACTTTGTTTCGAATGACGATTACAAGGGCATATTTTTCTGTTAATCTATGAAATTCTTCTGTG ATGACCACTCCATCCACAATCAAATGGAGACTTAGAGATTGGACTTTTTGCTTCTTAGCTTCAACATTTCCTTTAGGTATAACCCTTTTTTTCTCCCAATATCAATCACTTTCCACTTCTCTTTCTTATGTTCATAATAATGAACCAAACAAATACTTCACTTCAACACCACCATCTCCAATGCCAATAACAAATGTCAATTTCAACACGTCGAAAGGTAAAGAGAATAGGAAGAAGATGTCGAGACAGAGAAAGCACTCCTCGCCACAAGCTAAAGATGTTGTTGTTATGAACAAGACGACAGTGACGACGACAGATGATTCGAGTTGGCCACAGTTTGAAGATGAAGACTACATTGTCTTCTGTTTCAAAGAAGATGGAGCATTTGATGTTATAAAGAATGGGAATAATTCAGAGACTTCCCATTGCATTGATTTGGTTTCAACAAGTTCAAGACCAGTTAGTAGGAAGCTTAATTATAGTGAAAATGATAAAACAGCCAAAACATACAACAATGAGAAGAAGATCAATGGAGGTCACATTAGATCAGCTCAAATGGAGGATGAAGGGGAAGAAATAGAGAATACTTACATGGATAAAGAAGAGAACAGAATGGCTAATCACAATGAGGTGATCGATGACCATCCAATCGTGGCGGTGCCTACTGAATCAAGTGACTCGAATCATTCAGATGTCAGCAACGGCTCCTTCGCGTTTCCTGTTGGGATGGGATTGGAGTGGAAGCCCTGTGCAAATGCCAAAATCAAAAGGTTTGCAGCTGAGAAAGCACAAGGTGCGGTGTGTAGGATTCCAGTACTGTTGTAA MTTPSTIKWRLRDWTFCFLASTFPLGITLFFSQYQSLSTSLSYVHNNEPNKYFTSTPPSPMPITNVNFNTSKGKENRKKMSRQRKHSSPQAKDVVVMNKTTVTTTDDSSWPQFEDEDYIVFCFKEDGAFDVIKNGNNSETSHCIDLVSTSSRPVSRKLNYSENDKTAKTYNNEKKINGGHIRSAQMEDEGEEIENTYMDKEENRMANHNEVIDDHPIVAVPTESSDSNHSDVSNGSFAFPVGMGLEWKPCANAKIKRFAAEKAQGAVCRIPVLL
BLAST of Lsi02G001410 vs. Swiss-Prot
Match: BASL_ARATH (Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE OS=Arabidopsis thaliana GN=BASL PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.0e-12 Identity = 75/260 (28.85%), Postives = 111/260 (42.69%), Query Frame = 1
BLAST of Lsi02G001410 vs. TrEMBL
Match: A0A0A0LQB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039940 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 7.5e-63 Identity = 140/205 (68.29%), Postives = 155/205 (75.61%), Query Frame = 1
BLAST of Lsi02G001410 vs. TrEMBL
Match: A0A067K5I9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11763 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.6e-20 Identity = 94/266 (35.34%), Postives = 132/266 (49.62%), Query Frame = 1
BLAST of Lsi02G001410 vs. TrEMBL
Match: B9RLI7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1467500 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.8e-19 Identity = 86/255 (33.73%), Postives = 129/255 (50.59%), Query Frame = 1
BLAST of Lsi02G001410 vs. TrEMBL
Match: M5WD67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025572mg PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.2e-17 Identity = 89/254 (35.04%), Postives = 119/254 (46.85%), Query Frame = 1
BLAST of Lsi02G001410 vs. TrEMBL
Match: K4BKX9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 9.9e-15 Identity = 76/253 (30.04%), Postives = 111/253 (43.87%), Query Frame = 1
BLAST of Lsi02G001410 vs. TAIR10
Match: AT5G60880.1 (AT5G60880.1 breaking of asymmetry in the stomatal lineage) HSP 1 Score: 73.9 bits (180), Expect = 1.7e-13 Identity = 75/260 (28.85%), Postives = 111/260 (42.69%), Query Frame = 1
BLAST of Lsi02G001410 vs. NCBI nr
Match: gi|778657148|ref|XP_011650344.1| (PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE [Cucumis sativus]) HSP 1 Score: 248.8 bits (634), Expect = 1.1e-62 Identity = 140/205 (68.29%), Postives = 155/205 (75.61%), Query Frame = 1
BLAST of Lsi02G001410 vs. NCBI nr
Match: gi|659066645|ref|XP_008454236.1| (PREDICTED: uncharacterized protein LOC103494675 isoform X1 [Cucumis melo]) HSP 1 Score: 219.5 bits (558), Expect = 7.0e-54 Identity = 122/165 (73.94%), Postives = 135/165 (81.82%), Query Frame = 1
BLAST of Lsi02G001410 vs. NCBI nr
Match: gi|659066647|ref|XP_008454318.1| (PREDICTED: uncharacterized protein LOC103494675 isoform X2 [Cucumis melo]) HSP 1 Score: 207.2 bits (526), Expect = 3.6e-50 Identity = 118/165 (71.52%), Postives = 131/165 (79.39%), Query Frame = 1
BLAST of Lsi02G001410 vs. NCBI nr
Match: gi|694319668|ref|XP_009348030.1| (PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE [Pyrus x bretschneideri]) HSP 1 Score: 146.7 bits (369), Expect = 5.8e-32 Identity = 108/283 (38.16%), Postives = 154/283 (54.42%), Query Frame = 1
BLAST of Lsi02G001410 vs. NCBI nr
Match: gi|645269672|ref|XP_008240105.1| (PREDICTED: uncharacterized protein LOC103338654 [Prunus mume]) HSP 1 Score: 119.8 bits (299), Expect = 7.5e-24 Identity = 87/214 (40.65%), Postives = 124/214 (57.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |