CmaCh18G000180 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACCAATCTGGTTAGTGCTCTAATCGCCGTCATTACACTTCAAAGCAACTCAATGGGTAGCGCTGAACTTCTGTCTATGCCACAATCGCAGTCCCATCATAAATTCCGCCGAAAATGTCTCCTTCTACGGTAAAAAAGAGGAAACAAAACACAACTCATGCCCATAATCCATTAATACATGGTTTGTGTTTTTAAAAATTTAAAATTTGAAATGCCTTAGTTTTGTGCAATAATTGTGGGCGGTTTTATTATGCATTGCAGTTACGTCTTTAATTTTCATTATTGTCATCAATCATCCATCAAATAAAACAACTAAGCCTGAACAAATCAAGTATATAATGTCAATCCAAACCTGCCTGCATTGTTCTTTTGAAGCTTCCTCTGTCGAATAGCACCACACAAAGTCGAGTTTCAAAGGGATCATGTCACCCATCTCCGCCCTACAACAACCAACAAGGTAACAGAAACGGAATTGAATTAGTGAAGGTAACTGATATGTATATATTGTTCTGTATCTCAATTAGCATTTCAATGGTCTTCTCCTCTGATGTTTGGATGATTTTGTGTTTTTTCTACGTCTACCATTGCTAGATCACATGCCACTCACAACCATTTCTTTCATAAAAACGAAAGGAATTACTTTTAGAATAATCTTGATTTAGAAACCTAACTACGGATTCAGCAATGTACTTTTGAAAATGTTGTTCATTTAACAACATATTTAACTGACCAAGTTCTCCATGTTTAGGAACATAACTGACTCACTCGTCCCTCATTATTAGTAACTTCCCCTAGTAATGGTGTCTCTTTCAAATTCAAAGATTAGTTTCTTTCTCTCTCAGAAAAACTGGTTTAGAATAGAAGAGCGAACAGGAGAAAACATTGGACAATAGAAAAAGACACAGAAATGTCCACTCCATGGACAATGACACGGCTGGTGAGATGGCGAGTCAGAGATTGGGCTTCATGCTTTTTAGCTTCCAGATTTCCTTTATCTAAAACCAAAAGTAATAGAACATGCTAGCATTTAAAACACAATGACTTTTAGCTGTCTTTGACCGACTTCCTTTTGGTTTGTTATGTTAACAGTGAAGTTTCTTCTTCTACAGATAAGGAACCAGACTCATATTTCACTTCAACCCCAACCACAATGCCGATAAGAGCCATGGTTTTTGACAGAAAGAGTATTGCCTCAATAGCTAAAAGTAATAGCAAGAAGATGTCGAGGCACAGAAAGGGAAAGATGGAGCATTCTGAAGATTCTGCTGCTGTTGTTGCTGTCAAAAACAAGATGACTGATGATTCGAGTTGGGCACAATGTGAAGATGAAGACTACATTGTCTTCTGTTTCAGAGAAGATGGAGCATTTGATGTTATGAAGAATCGGAATTCAGATGCTTCCAATTACATTGATTTGGTTTCAGCAACTTCAAGACCAGTTAGTCGGAAGGTTTATATACAACCTCATGTTTTATTGTCTATCATATGATTGATTCAATATGAATGATAAAGAAATCACTCTCTGTCTCTCTAAACAGCTTAATTATGGTGAACATGATAAAGCAGTCAAGAGATGCAATAATGAAAAGAGGATAAATGGAGGTACACCTGATACTTACTACACAAAAGATGGAGATCACATTATATCACCTCAAAAGGTACGAATCATTACCATTTATGCGCACTTCAGAAATCACCGCGATTACTAATATGAAGATTTACTAATACGAATCATTACCATTTATGTTGCCTTCATTCTGTGTTGAGTTGTAGGATAAGGAGGGAGAAAAACTGGAGGATACTTGCATGGATAAAGAATCAGGTATGGGTAAGAACAGAATGGGAAATCACAAAGAGGTGATCAATGGCGATCCGATCGTGGCAGTGCCGACTGAATCAAGCGATTCTAACCATTCAGATGTCAGCAATGGCTCCTTCGCCTTTCCTGTGTAAGCACCCCCTAATGATAAAAAAGAAAGATATGGGAAAATGCTATTAAGATGATACATGAATGCTAATTCTATGTGAGATGTAATGCAGGCTAGGATTGGAGTGGAGTGGAAGTCCTGTGCAAATGCCAAAATCAGAAGGCTTGCAGCTTAGAAAGCACAAGGCACGGTGTGTAGGATTCCAGTGTTGTAAATTCTGA ATGGCTACCAATCTGGTTAGTGCTCTAATCGCCGTCATTACACTTCAAAGCAACTCAATGGGTAGCGCTGAACTTCTGTCTATGCCACAATCGCAGTCCCATCATAAATTCCGCCGAAAATGTCTCCTTCTACGCACCACACAAAGTCGAGTTTCAAAGGGATCATGTCACCCATCTCCGCCCTACAACAACCAACAAGATAAGGAACCAGACTCATATTTCACTTCAACCCCAACCACAATGCCGATAAGAGCCATGGTTTTTGACAGAAAGAGTATTGCCTCAATAGCTAAAAGTAATAGCAAGAAGATGTCGAGGCACAGAAAGGGAAAGATGGAGCATTCTGAAGATTCTGCTGCTGTTGTTGCTGTCAAAAACAAGATGACTGATGATTCGAGTTGGGCACAATGTGAAGATGAAGACTACATTGTCTTCTGTTTCAGAGAAGATGGAGCATTTGATGTTATGAAGAATCGGAATTCAGATGCTTCCAATTACATTGATTTGGTTTCAGCAACTTCAAGACCAGTTAGTCGGAAGCTTAATTATGGTGAACATGATAAAGCAGTCAAGAGATGCAATAATGAAAAGAGGATAAATGGAGGTACACCTGATACTTACTACACAAAAGATGGAGATCACATTATATCACCTCAAAAGGATAAGGAGGGAGAAAAACTGGAGGATACTTGCATGGATAAAGAATCAGGTATGGGTAAGAACAGAATGGGAAATCACAAAGAGGTGATCAATGGCGATCCGATCGTGGCAGTGCCGACTGAATCAAGCGATTCTAACCATTCAGATGTCAGCAATGGCTCCTTCGCCTTTCCTGTGCTAGGATTGGAGTGGAGTGGAAGTCCTGTGCAAATGCCAAAATCAGAAGGCTTGCAGCTTAGAAAGCACAAGGCACGGTGTGTAGGATTCCAGTGTTGTAAATTCTGA ATGGCTACCAATCTGGTTAGTGCTCTAATCGCCGTCATTACACTTCAAAGCAACTCAATGGGTAGCGCTGAACTTCTGTCTATGCCACAATCGCAGTCCCATCATAAATTCCGCCGAAAATGTCTCCTTCTACGCACCACACAAAGTCGAGTTTCAAAGGGATCATGTCACCCATCTCCGCCCTACAACAACCAACAAGATAAGGAACCAGACTCATATTTCACTTCAACCCCAACCACAATGCCGATAAGAGCCATGGTTTTTGACAGAAAGAGTATTGCCTCAATAGCTAAAAGTAATAGCAAGAAGATGTCGAGGCACAGAAAGGGAAAGATGGAGCATTCTGAAGATTCTGCTGCTGTTGTTGCTGTCAAAAACAAGATGACTGATGATTCGAGTTGGGCACAATGTGAAGATGAAGACTACATTGTCTTCTGTTTCAGAGAAGATGGAGCATTTGATGTTATGAAGAATCGGAATTCAGATGCTTCCAATTACATTGATTTGGTTTCAGCAACTTCAAGACCAGTTAGTCGGAAGCTTAATTATGGTGAACATGATAAAGCAGTCAAGAGATGCAATAATGAAAAGAGGATAAATGGAGGTACACCTGATACTTACTACACAAAAGATGGAGATCACATTATATCACCTCAAAAGGATAAGGAGGGAGAAAAACTGGAGGATACTTGCATGGATAAAGAATCAGGTATGGGTAAGAACAGAATGGGAAATCACAAAGAGGTGATCAATGGCGATCCGATCGTGGCAGTGCCGACTGAATCAAGCGATTCTAACCATTCAGATGTCAGCAATGGCTCCTTCGCCTTTCCTGTGCTAGGATTGGAGTGGAGTGGAAGTCCTGTGCAAATGCCAAAATCAGAAGGCTTGCAGCTTAGAAAGCACAAGGCACGGTGTGTAGGATTCCAGTGTTGTAAATTCTGA MATNLVSALIAVITLQSNSMGSAELLSMPQSQSHHKFRRKCLLLRTTQSRVSKGSCHPSPPYNNQQDKEPDSYFTSTPTTMPIRAMVFDRKSIASIAKSNSKKMSRHRKGKMEHSEDSAAVVAVKNKMTDDSSWAQCEDEDYIVFCFREDGAFDVMKNRNSDASNYIDLVSATSRPVSRKLNYGEHDKAVKRCNNEKRINGGTPDTYYTKDGDHIISPQKDKEGEKLEDTCMDKESGMGKNRMGNHKEVINGDPIVAVPTESSDSNHSDVSNGSFAFPVLGLEWSGSPVQMPKSEGLQLRKHKARCVGFQCCKF
BLAST of CmaCh18G000180 vs. Swiss-Prot
Match: BASL_ARATH (Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE OS=Arabidopsis thaliana GN=BASL PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.4e-18 Identity = 71/232 (30.60%), Postives = 102/232 (43.97%), Query Frame = 1
BLAST of CmaCh18G000180 vs. TrEMBL
Match: A0A0A0LQB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039940 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 5.2e-60 Identity = 141/259 (54.44%), Postives = 165/259 (63.71%), Query Frame = 1
BLAST of CmaCh18G000180 vs. TrEMBL
Match: B9RLI7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1467500 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.5e-35 Identity = 102/234 (43.59%), Postives = 140/234 (59.83%), Query Frame = 1
BLAST of CmaCh18G000180 vs. TrEMBL
Match: A0A067K5I9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11763 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 101/271 (37.27%), Postives = 149/271 (54.98%), Query Frame = 1
BLAST of CmaCh18G000180 vs. TrEMBL
Match: W9S533_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016672 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 4.5e-27 Identity = 93/230 (40.43%), Postives = 121/230 (52.61%), Query Frame = 1
BLAST of CmaCh18G000180 vs. TrEMBL
Match: V7CCX7_PHAVU (Uncharacterized protein (Fragment) OS=Phaseolus vulgaris GN=PHAVU_003G182300g PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.1e-20 Identity = 78/226 (34.51%), Postives = 115/226 (50.88%), Query Frame = 1
BLAST of CmaCh18G000180 vs. TAIR10
Match: AT5G60880.1 (AT5G60880.1 breaking of asymmetry in the stomatal lineage) HSP 1 Score: 95.1 bits (235), Expect = 8.0e-20 Identity = 71/232 (30.60%), Postives = 102/232 (43.97%), Query Frame = 1
BLAST of CmaCh18G000180 vs. NCBI nr
Match: gi|659066645|ref|XP_008454236.1| (PREDICTED: uncharacterized protein LOC103494675 isoform X1 [Cucumis melo]) HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62 Identity = 146/260 (56.15%), Postives = 168/260 (64.62%), Query Frame = 1
BLAST of CmaCh18G000180 vs. NCBI nr
Match: gi|778657148|ref|XP_011650344.1| (PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE [Cucumis sativus]) HSP 1 Score: 239.6 bits (610), Expect = 7.5e-60 Identity = 141/259 (54.44%), Postives = 165/259 (63.71%), Query Frame = 1
BLAST of CmaCh18G000180 vs. NCBI nr
Match: gi|659066647|ref|XP_008454318.1| (PREDICTED: uncharacterized protein LOC103494675 isoform X2 [Cucumis melo]) HSP 1 Score: 236.1 bits (601), Expect = 8.3e-59 Identity = 142/260 (54.62%), Postives = 164/260 (63.08%), Query Frame = 1
BLAST of CmaCh18G000180 vs. NCBI nr
Match: gi|658032782|ref|XP_008351899.1| (PREDICTED: uncharacterized protein LOC103415336 [Malus domestica]) HSP 1 Score: 190.7 bits (483), Expect = 4.0e-45 Identity = 124/261 (47.51%), Postives = 155/261 (59.39%), Query Frame = 1
BLAST of CmaCh18G000180 vs. NCBI nr
Match: gi|694317721|ref|XP_009339542.1| (PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE-like [Pyrus x bretschneideri]) HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41 Identity = 113/226 (50.00%), Postives = 143/226 (63.27%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |