Csa1G039940 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G039940
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Breaking of asymmetry in the stomatal lineage protein
Location	Chr1 : 3969849 .. 3970825 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAAACGAGTGTCGTTTTCGGTATGATGAGTATTACCTCGAAAGGTAAAGGGAGTTGCAAGAAGATTTCGAGACACAGAAAGCACTCCTCACCACAAGCTAAAGATGTTGTTGTCGAAAAGAAGACGACAACAACGGGGGATAGTTCAAGTTGGCCACAGTTTGAAGATGAAGACTACATTGTCTTCTGTTTCAAAGAAGATGGAGCATTCGATGTTATAAAGAATGGGAATAATTCAGACACTTCTCATTGCATTGATTTAGTTTCAACAAGTTCTAGACCAGTTAGTAGGAAGGTTTTGTGTACTTCATGTTTTCATCGTCTATTTTACGATATGATTCTAAATGAAAGATTAAGTAAATCTCTCTCTCTCTTGACAGCTTAATTATAGTAAATGGGATAAAGCAGCCAAAAGATACAACAATGGAGATTACGTTATATCACCTCAAAAGGTACATAATCTTTACCATTCATTTATCTTTCCATGATCACAAATGTGAAGATTTGCTGAGATGAGTTGCAGGAGGATGAAGGGGAAGAAATGAAGAATATTCACCTGGATAAAGAAGAGAACAGAATGGCAAATCACAACCAGCTGATCGATAAAAATTCGATTGTGGCAGTGCCTACTGAATCAAGCGACTCAAATTATTCAGATGTGGCAAATCACAACCAGATGATCGATAACCATCCAATCGTGGCAGTACCTACCGAATCAAGCGACTCTAATTATTCAGATGTTAGCAATGGATCCTTCGCGTTTCCTGTGTAAGCCTTTCCACAATAATATTAATGATATAAAGGGAAAAGATGGGAAAATGTTAATAAAGATTGAAAATAAATTCCAATTCTTGTAGGTTGGGATGGGAGTGGAGTGGAAGTCCAGTGCAAATGCCAAAATCAAAAGGTTTGCAGCTGAGAAAGCACAAAGTGGGGTGTGTAGGAGGATTTCTTTTCTGTTGTAAATTTTAA

mRNA sequence

ATGCAAAAAACGAGTGTCGTTTTCGGTATGATGAGTATTACCTCGAAAGGTAAAGGGAGTTGCAAGAAGATTTCGAGACACAGAAAGCACTCCTCACCACAAGCTAAAGATGTTGTTGTCGAAAAGAAGACGACAACAACGGGGGATAGTTCAAGTTGGCCACAGTTTGAAGATGAAGACTACATTGTCTTCTGTTTCAAAGAAGATGGAGCATTCGATGTTATAAAGAATGGGAATAATTCAGACACTTCTCATTGCATTGATTTAGTTTCAACAAGTTCTAGACCAGTTAGTAGGAAGCTTAATTATAGTAAATGGGATAAAGCAGCCAAAAGATACAACAATGGAGATTACGTTATATCACCTCAAAAGGAGGATGAAGGGGAAGAAATGAAGAATATTCACCTGGATAAAGAAGAGAACAGAATGGCAAATCACAACCAGCTGATCGATAAAAATTCGATTGTGGCAGTGCCTACTGAATCAAGCGACTCAAATTATTCAGATGTGGCAAATCACAACCAGATGATCGATAACCATCCAATCGTGGCAGTACCTACCGAATCAAGCGACTCTAATTATTCAGATGTTAGCAATGGATCCTTCGCGTTTCCTGTGTTGGGATGGGAGTGGAGTGGAAGTCCAGTGCAAATGCCAAAATCAAAAGGTTTGCAGCTGAGAAAGCACAAAGTGGGGTGTGTAGGAGGATTTCTTTTCTGTTGTAAATTTTAA

Coding sequence (CDS)

ATGCAAAAAACGAGTGTCGTTTTCGGTATGATGAGTATTACCTCGAAAGGTAAAGGGAGTTGCAAGAAGATTTCGAGACACAGAAAGCACTCCTCACCACAAGCTAAAGATGTTGTTGTCGAAAAGAAGACGACAACAACGGGGGATAGTTCAAGTTGGCCACAGTTTGAAGATGAAGACTACATTGTCTTCTGTTTCAAAGAAGATGGAGCATTCGATGTTATAAAGAATGGGAATAATTCAGACACTTCTCATTGCATTGATTTAGTTTCAACAAGTTCTAGACCAGTTAGTAGGAAGCTTAATTATAGTAAATGGGATAAAGCAGCCAAAAGATACAACAATGGAGATTACGTTATATCACCTCAAAAGGAGGATGAAGGGGAAGAAATGAAGAATATTCACCTGGATAAAGAAGAGAACAGAATGGCAAATCACAACCAGCTGATCGATAAAAATTCGATTGTGGCAGTGCCTACTGAATCAAGCGACTCAAATTATTCAGATGTGGCAAATCACAACCAGATGATCGATAACCATCCAATCGTGGCAGTACCTACCGAATCAAGCGACTCTAATTATTCAGATGTTAGCAATGGATCCTTCGCGTTTCCTGTGTTGGGATGGGAGTGGAGTGGAAGTCCAGTGCAAATGCCAAAATCAAAAGGTTTGCAGCTGAGAAAGCACAAAGTGGGGTGTGTAGGAGGATTTCTTTTCTGTTGTAAATTTTAA

Protein sequence

MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDEDYIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVISPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNHPIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFCCKF*

Homology

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BLAST of Csa1G039940 vs. Swiss-Prot
Match: BASL_ARATH (Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE OS=Arabidopsis thaliana GN=BASL PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-16
Identity = 70/207 (33.82%), Postives = 94/207 (45.41%), Query Frame = 1


Query: 45  TTTGDSS---SWPQ---FEDEDYIVFCF-KEDGAFDVIKNGNNSDTSHCIDLVSTSSRPV 104
           TT+G      SWPQ    E+  +IVFCF +EDG FDV+K G   +          S R V
Sbjct: 91  TTSGSQHRRLSWPQPPVSEESGFIVFCFDREDGGFDVVKEGKQ-EKKETESSSEKSPRTV 150

Query: 105 SRKLNYSKWDKAAKRYNNGDYVISPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVA 164
           +RKL Y            GD  +   +++   E K    D+ +N      +  D +S V 
Sbjct: 151 NRKLIY------------GDQGVGGTEKNNSPETKGTEQDQNDNTSCQGTK--DVSSDVT 210

Query: 165 VPT-ESSDSNYSDVANHNQMIDNHPIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPV 224
             T E  D + SD                  +SS S++SD   GSFAFP+LG EW GSP 
Sbjct: 211 ERTKEEEDIDASD------------------KSSGSSHSDEGRGSFAFPILGVEWMGSPA 262

Query: 225 QMPKSKGLQLRKHKVGCVGGFLFCCKF 244
           +MP+S  L  +K K   +G    CC+F
Sbjct: 271 KMPESDDLSPKKQKPVALG--FQCCRF 262

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BLAST of Csa1G039940 vs. TrEMBL
Match: A0A0A0LQB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039940 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 5.2e-140
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1


Query: 1   MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED 60
           MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED
Sbjct: 1   MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED 60

Query: 61  YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI 120
           YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI
Sbjct: 61  YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI 120

Query: 121 SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH 180
           SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH
Sbjct: 121 SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH 180

Query: 181 PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240
           PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC
Sbjct: 181 PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240

Query: 241 CKF 244
           CKF
Sbjct: 241 CKF 243

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BLAST of Csa1G039940 vs. TrEMBL
Match: B9RLI7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1467500 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27
Identity = 85/229 (37.12%), Postives = 116/229 (50.66%), Query Frame = 1


Query: 22  KKISRH---RKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDEDYIVFCFKEDGAFDVIKNG 81
           KK+SR    RK       +  VE K+  T    SWP F++EDYIVFCF+EDGAFDV+K+ 
Sbjct: 48  KKLSRQNRCRKERHDDRDNAAVENKSNDT----SWPHFQEEDYIVFCFREDGAFDVVKDC 107

Query: 82  NNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNN----GDYVISPQKEDEGEEMKNI 141
             SD    +D  + S R VSR L Y +  +  +  ++     D  +    ++EGEE    
Sbjct: 108 K-SDALDRVDSANKSPRLVSRMLKYGEVAETVRNSSHWKRSNDSCLRSGIDEEGEEKHCS 167

Query: 142 HLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNHPIVAVPTESSDSNY 201
           +LD +   +    Q                  + ++ N          +A+  ESSDSN 
Sbjct: 168 NLDTKSRCVTRSRQ------------------FGEIENGG--------IALSVESSDSNN 227

Query: 202 SDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFCCKF 244
           SD S GSF+FPVL WE  GSPVQMP+S+ L +RKHK  C      CC+F
Sbjct: 228 SDSSKGSFSFPVLHWELMGSPVQMPRSESLYIRKHKASCAR--FQCCRF 243

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BLAST of Csa1G039940 vs. TrEMBL
Match: M5WD67_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025572mg PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 90/249 (36.14%), Postives = 120/249 (48.19%), Query Frame = 1


Query: 5   SVVFGMMSITSKGKGSCKKISRHRK--------HSSPQAKDVV-VEKKTTTTGDSSSWPQ 64
           ++ F M   +   + + KK+SRH+K        HSS Q K    VE +++   +S   P 
Sbjct: 42  NMAFDMQDDSRCNETNTKKMSRHKKCSRERRLSHSSQQVKGTCPVESRSSN--NSRCRPH 101

Query: 65  FEDEDYIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSS-RPVSRKLNYSKWDKAAKRYN 124
           F DE++IVFCFKEDGAFDV+KNG   + +  ID  S +S RPV+R               
Sbjct: 102 FSDEEFIVFCFKEDGAFDVVKNG-KPEAASSIDCTSRNSPRPVNR--------------- 161

Query: 125 NGDYVISPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHN 184
                    K++E EE   +  +     +A   ++        V  ESSDSN        
Sbjct: 162 ---------KDEEEEEENYLGTEPHPGSIAEDCRM--------VSVESSDSNQ------- 221

Query: 185 QMIDNHPIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCV 244
                               SD S GSFAFPVLG EW+GSPVQMPKS+ L+LRKHK  C+
Sbjct: 222 --------------------SDGSTGSFAFPVLGLEWTGSPVQMPKSEALELRKHKARCI 228

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BLAST of Csa1G039940 vs. TrEMBL
Match: A0A067K5I9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11763 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 81/239 (33.89%), Postives = 122/239 (51.05%), Query Frame = 1


Query: 13  ITSKGKGSCKKISRHRKHSSPQAKDVVVE----KKTTTTGDSSSWPQFEDEDYIVFCFKE 72
           ++S+ +  C+     RK  +  A   ++     +    +  SSSWP F++EDYIVFCFKE
Sbjct: 60  MSSRQRNRCRNGKTDRKDKNRNANTTIISTVSMENMVKSESSSSWPHFQEEDYIVFCFKE 119

Query: 73  DGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVISPQKED-- 132
           DGAF+VIK+ N+          + SSRPV+RKLNY +  + A++ ++    ++ Q  D  
Sbjct: 120 DGAFEVIKDFNSEALDLFDSAHNRSSRPVNRKLNYGEIAETARKSSSNGKRLNVQGNDAF 179

Query: 133 --EGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNHPIVA 192
              GE +  +   +E           ++NS + + + S+                     
Sbjct: 180 LRNGERISPLEEGEE-----------EENSYLDIESPST--------------------- 239

Query: 193 VPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFCCKF 244
             TESS SN S+ S+GSF+FPVL  E  GSP +MPKS+ L +RKHKV C      CC+F
Sbjct: 240 --TESSGSNRSESSSGSFSFPVLQSELIGSPTKMPKSESLCIRKHKVSCAR--FQCCRF 262

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BLAST of Csa1G039940 vs. TrEMBL
Match: K4BKX9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.0e-20
Identity = 78/255 (30.59%), Postives = 116/255 (45.49%), Query Frame = 1


Query: 2   QKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDEDY 61
           QK S       I    K   KK+++  +    +   V  EK      + SSWP+F +EDY
Sbjct: 42  QKPSRKMVFDPIGDSRKNRKKKLNKKMEQRKKEKVKVSAEKGEKEGENDSSWPRFSEEDY 101

Query: 62  IVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSK--WDKAAKRYNNGDYV 121
           IVFCF++DG   ++++  +      ID  + +S+ V RKL Y +   +   +  N+   V
Sbjct: 102 IVFCFEDDGGIHIVEDRKSEVFHQKIDHANVTSKSVCRKLKYVEDVSEFLPQSKNDTISV 161

Query: 122 ISPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDN 181
                 +  EE   +  DK++ +            I  +  E   +   ++++  ++ D+
Sbjct: 162 DGENSFESAEEQIPVIDDKDQGK-----------GIDDMEDEWPPAVVKEISHIGEVSDS 221

Query: 182 HPIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSK-----------GLQLRK 241
                   ESSDSNYS  S GSFAFPVLGWE  GSP QMPK +           G +  K
Sbjct: 222 K--TTPSAESSDSNYSTGSTGSFAFPVLGWELMGSPAQMPKPEEDDEDEEEEEGGPRFGK 281

Query: 242 HKVGCVGGFLFCCKF 244
           HK  C      CCKF
Sbjct: 282 HKAWCSVRH-HCCKF 282

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BLAST of Csa1G039940 vs. TAIR10
Match: AT5G60880.1 (AT5G60880.1 breaking of asymmetry in the stomatal lineage)

HSP 1 Score: 88.2 bits (217), Expect = 7.6e-18
Identity = 70/207 (33.82%), Postives = 94/207 (45.41%), Query Frame = 1


Query: 45  TTTGDSS---SWPQ---FEDEDYIVFCF-KEDGAFDVIKNGNNSDTSHCIDLVSTSSRPV 104
           TT+G      SWPQ    E+  +IVFCF +EDG FDV+K G   +          S R V
Sbjct: 91  TTSGSQHRRLSWPQPPVSEESGFIVFCFDREDGGFDVVKEGKQ-EKKETESSSEKSPRTV 150

Query: 105 SRKLNYSKWDKAAKRYNNGDYVISPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVA 164
           +RKL Y            GD  +   +++   E K    D+ +N      +  D +S V 
Sbjct: 151 NRKLIY------------GDQGVGGTEKNNSPETKGTEQDQNDNTSCQGTK--DVSSDVT 210

Query: 165 VPT-ESSDSNYSDVANHNQMIDNHPIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPV 224
             T E  D + SD                  +SS S++SD   GSFAFP+LG EW GSP 
Sbjct: 211 ERTKEEEDIDASD------------------KSSGSSHSDEGRGSFAFPILGVEWMGSPA 262

Query: 225 QMPKSKGLQLRKHKVGCVGGFLFCCKF 244
           +MP+S  L  +K K   +G    CC+F
Sbjct: 271 KMPESDDLSPKKQKPVALG--FQCCRF 262

[Close]

BLAST of Csa1G039940 vs. NCBI nr
Match: gi|778657148|ref|XP_011650344.1| (PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE [Cucumis sativus])

HSP 1 Score: 505.0 bits (1299), Expect = 7.4e-140
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 1


Query: 1   MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED 60
           MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED
Sbjct: 1   MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED 60

Query: 61  YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI 120
           YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI
Sbjct: 61  YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI 120

Query: 121 SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH 180
           SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH
Sbjct: 121 SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH 180

Query: 181 PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240
           PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC
Sbjct: 181 PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240

Query: 241 CKF 244
           CKF
Sbjct: 241 CKF 243

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BLAST of Csa1G039940 vs. NCBI nr
Match: gi|659066645|ref|XP_008454236.1| (PREDICTED: uncharacterized protein LOC103494675 isoform X1 [Cucumis melo])

HSP 1 Score: 449.5 bits (1155), Expect = 3.7e-123
Identity = 220/243 (90.53%), Postives = 230/243 (94.65%), Query Frame = 1


Query: 1   MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED 60
           MQKTSVVF MMSITSKGKG+CKK+SRHRK S P AKD+VVEKKTT   DSSS PQFEDED
Sbjct: 1   MQKTSVVFDMMSITSKGKGNCKKMSRHRKRSLPHAKDIVVEKKTTMM-DSSSRPQFEDED 60

Query: 61  YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI 120
           YIVFCFKEDGA DVIKNGNNS TS  IDLVSTSSRPVSRKLNYS++DKAAKRYNNGD++I
Sbjct: 61  YIVFCFKEDGALDVIKNGNNSQTSQYIDLVSTSSRPVSRKLNYSEYDKAAKRYNNGDHII 120

Query: 121 SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH 180
           SPQKEDEGEEMKNIH+DKEENRMANHNQLID NSIVAVPTESSDSNYSDVA+HNQMIDNH
Sbjct: 121 SPQKEDEGEEMKNIHMDKEENRMANHNQLIDNNSIVAVPTESSDSNYSDVASHNQMIDNH 180

Query: 181 PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240
           PIVAVPTESSDS+YSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC
Sbjct: 181 PIVAVPTESSDSSYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240

Query: 241 CKF 244
           CKF
Sbjct: 241 CKF 242

[Close]

BLAST of Csa1G039940 vs. NCBI nr
Match: gi|659066647|ref|XP_008454318.1| (PREDICTED: uncharacterized protein LOC103494675 isoform X2 [Cucumis melo])

HSP 1 Score: 436.8 bits (1122), Expect = 2.5e-119
Identity = 216/243 (88.89%), Postives = 226/243 (93.00%), Query Frame = 1


Query: 1   MQKTSVVFGMMSITSKGKGSCKKISRHRKHSSPQAKDVVVEKKTTTTGDSSSWPQFEDED 60
           MQKTSVVF MMSITSKGKG+CKK+SRHRK S P AKD+VVEKKTT   DSSS PQFEDED
Sbjct: 1   MQKTSVVFDMMSITSKGKGNCKKMSRHRKRSLPHAKDIVVEKKTTMM-DSSSRPQFEDED 60

Query: 61  YIVFCFKEDGAFDVIKNGNNSDTSHCIDLVSTSSRPVSRKLNYSKWDKAAKRYNNGDYVI 120
           YIVFCFKEDGA DVIKNGNNS TS  IDLVSTSSRP    LNYS++DKAAKRYNNGD++I
Sbjct: 61  YIVFCFKEDGALDVIKNGNNSQTSQYIDLVSTSSRP----LNYSEYDKAAKRYNNGDHII 120

Query: 121 SPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMIDNH 180
           SPQKEDEGEEMKNIH+DKEENRMANHNQLID NSIVAVPTESSDSNYSDVA+HNQMIDNH
Sbjct: 121 SPQKEDEGEEMKNIHMDKEENRMANHNQLIDNNSIVAVPTESSDSNYSDVASHNQMIDNH 180

Query: 181 PIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 240
           PIVAVPTESSDS+YSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC
Sbjct: 181 PIVAVPTESSDSSYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFC 238

Query: 241 CKF 244
           CKF
Sbjct: 241 CKF 238

[Close]

BLAST of Csa1G039940 vs. NCBI nr
Match: gi|694317721|ref|XP_009339542.1| (PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE-like [Pyrus x bretschneideri])

HSP 1 Score: 154.5 bits (389), Expect = 2.5e-34
Identity = 100/239 (41.84%), Postives = 133/239 (55.65%), Query Frame = 1


Query: 22  KKISRHRK--------HSSPQAKDVVVEKKTTTTGDSSSWPQFEDED-YIVFCFKEDGAF 81
           KK+SRH+K        H   Q KD     + T++ DSS  P F DE+ YIVFCFKEDGAF
Sbjct: 16  KKMSRHKKCDRERRLRHGPKQVKDSSSPVENTSSNDSSCRPHFSDEEEYIVFCFKEDGAF 75

Query: 82  DVIKNGNNSDTSHCIDLVSTSS-RPVSRKLNYSKWDKAAKRYNNGD------YVISPQKE 141
           +V+KNG   + S+  D  S +S R V+RKL+Y +  KA +R +N +      Y I P  +
Sbjct: 76  EVVKNGK-VEASNVRDCASRNSPRHVNRKLSYGEDTKAVERRSNEERLTGKAYDIYPTND 135

Query: 142 DEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYS-DVANHNQMIDNHPIVA 201
                 K+I  D+++                    E  +  YS      +  ++N P ++
Sbjct: 136 G-----KSIIFDQKD--------------------EEDEETYSGQEPPPSSNVENRPTMS 195

Query: 202 VPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFLFCCKF 244
           V  ESSDSN SD S GSFAFPVLGWEW+GSPVQMPKS+ + LRKHK  C+G    CC+F
Sbjct: 196 V--ESSDSNQSDGSTGSFAFPVLGWEWTGSPVQMPKSEAMDLRKHKARCIGFQFQCCRF 226

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BLAST of Csa1G039940 vs. NCBI nr
Match: gi|658032782|ref|XP_008351899.1| (PREDICTED: uncharacterized protein LOC103415336 [Malus domestica])

HSP 1 Score: 151.4 bits (381), Expect = 2.1e-33
Identity = 100/245 (40.82%), Postives = 133/245 (54.29%), Query Frame = 1


Query: 15  SKGKGSCKKISRHRK--------HSSPQAKDVVVEKKTTTTGDSSSWPQFEDED-YIVFC 74
           S+   + KK+SRH+K        H   Q KD     + T++ DSS  P   DE+ YIVFC
Sbjct: 51  SRSNETGKKMSRHKKCDTERRLRHGPKQVKDSSSPVENTSSNDSSCRPHISDEEEYIVFC 110

Query: 75  FKEDGAFDVIKNGNNSDTSHCIDLVSTSS-RPVSRKLNYSKWDKAAKRYNNGD------Y 134
           FKEDGAF+V+KNG   + S+  D  S +S R V+RKL Y +  KA +R +N +      Y
Sbjct: 111 FKEDGAFEVVKNGK-VEASNVRDCASRNSPRHVNRKLRYGEDTKAVERCSNEERLTGKAY 170

Query: 135 VISPQKEDEGEEMKNIHLDKEENRMANHNQLIDKNSIVAVPTESSDSNYSDVANHNQMID 194
            I P  +      K+I  D+++                    E + S      + N  ++
Sbjct: 171 DIYPTNDG-----KSIXFDQKDEE-----------------DEETFSGQEPPPSIN--VE 230

Query: 195 NHPIVAVPTESSDSNYSDVSNGSFAFPVLGWEWSGSPVQMPKSKGLQLRKHKVGCVGGFL 244
           N P V+V  ESSDSN SD S GSFAFPVLGWEW+GSPVQMPK + + LRKHK  C+G   
Sbjct: 231 NRPTVSV--ESSDSNQSDGSTGSFAFPVLGWEWTGSPVQMPKREAMDLRKHKARCIGFQF 268

The following BLAST results are available for this feature:

BLAST of Csa1G039940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BASL_ARATH	1.4e-16	33.82	Protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE OS=Arabidopsis thaliana GN...	[more]

BLAST of Csa1G039940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQB1_CUCSA	5.2e-140	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039940 PE=4 SV=1	[more]
B9RLI7_RICCO	1.6e-27	37.12	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1467500 PE=4 SV=1	[more]
M5WD67_PRUPE	1.1e-25	36.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025572mg PE=4 SV=1	[more]
A0A067K5I9_JATCU	1.1e-25	33.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11763 PE=4 SV=1	[more]
K4BKX9_SOLLC	7.0e-20	30.59	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Csa1G039940 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60880.1	7.6e-18	33.82	breaking of asymmetry in the stomatal lineage	[more]

BLAST of Csa1G039940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778657148\|ref\|XP_011650344.1\|	7.4e-140	100.00	PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE [Cucumis sativu...	[more]
gi\|659066645\|ref\|XP_008454236.1\|	3.7e-123	90.53	PREDICTED: uncharacterized protein LOC103494675 isoform X1 [Cucumis melo]	[more]
gi\|659066647\|ref\|XP_008454318.1\|	2.5e-119	88.89	PREDICTED: uncharacterized protein LOC103494675 isoform X2 [Cucumis melo]	[more]
gi\|694317721\|ref\|XP_009339542.1\|	2.5e-34	41.84	PREDICTED: protein BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE-like [Pyrus x b...	[more]
gi\|658032782\|ref\|XP_008351899.1\|	2.1e-33	40.82	PREDICTED: uncharacterized protein LOC103415336 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU084950	cucumber EST collection version 3.0	transcribed_cluster
CU088743	cucumber EST collection version 3.0	transcribed_cluster
CU091634	cucumber EST collection version 3.0	transcribed_cluster
CU093262	cucumber EST collection version 3.0	transcribed_cluster
CU134463	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G039940.1	Csa1G039940.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU134463	CU134463	transcribed_cluster
CU093262	CU093262	transcribed_cluster
CU091634	CU091634	transcribed_cluster
CU084950	CU084950	transcribed_cluster
CU088743	CU088743	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33914	FAMILY NOT NAMED	coord: 39..243 score: 3.9
None	No IPR available	PANTHER	PTHR33914:SF3	BREAKING OF ASYMMETRY IN THE STOMATAL LINEAGE PROTEIN	coord: 39..243 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G039940	Cla018541	Watermelon (97103) v1	cuwmB062
Csa1G039940	MELO3C002053	Melon (DHL92) v3.5.1	cumeB027
Csa1G039940	ClCG04G011570	Watermelon (Charleston Gray)	cuwcgB057
Csa1G039940	Lsi02G001410	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G039940	MELO3C002053.2	Melon (DHL92) v3.6.1	cumedB022
Csa1G039940	Cla97C04G078400	Watermelon (97103) v2	cuwmbB054
Csa1G039940	Bhi08G000885	Wax gourd	cuwgoB050
Csa1G039940	CSPI01G06380	Wild cucumber (PI 183967)	cpicuB000
Csa1G039940	CmaCh18G000180	Cucurbita maxima (Rimu)	cmacuB405
Csa1G039940	Cp4.1LG09g11510	Cucurbita pepo (Zucchini)	cpecuB023
Csa1G039940	CsGy1G006080	Cucumber (Gy14) v2	cgybcuB001
Csa1G039940	Carg22772	Silver-seed gourd	carcuB0539

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G039940	Melon (DHL92) v3.6.1	cumedB048
Csa1G039940	Melon (DHL92) v3.6.1	cumedB056
Csa1G039940	Melon (DHL92) v3.6.1	cumedB073
Csa1G039940	Silver-seed gourd	carcuB0415
Csa1G039940	Silver-seed gourd	carcuB0492
Csa1G039940	Silver-seed gourd	carcuB0542
Csa1G039940	Silver-seed gourd	carcuB0623
Csa1G039940	Watermelon (97103) v2	cuwmbB086
Csa1G039940	Watermelon (97103) v2	cuwmbB080
Csa1G039940	Wax gourd	cuwgoB106
Csa1G039940	Cucumber (Chinese Long) v2	cucuB000
Csa1G039940	Cucumber (Chinese Long) v2	cucuB003
Csa1G039940	Cucumber (Chinese Long) v2	cucuB027
Csa1G039940	Cucumber (Chinese Long) v2	cucuB037
Csa1G039940	Cucumber (Gy14) v1	cgycuB137
Csa1G039940	Cucumber (Gy14) v1	cgycuB300
Csa1G039940	Cucumber (Gy14) v1	cgycuB302
Csa1G039940	Cucurbita maxima (Rimu)	cmacuB069
Csa1G039940	Cucurbita maxima (Rimu)	cmacuB088
Csa1G039940	Cucurbita maxima (Rimu)	cmacuB217
Csa1G039940	Cucurbita maxima (Rimu)	cmacuB390
Csa1G039940	Cucurbita maxima (Rimu)	cmacuB430
Csa1G039940	Cucurbita moschata (Rifu)	cmocuB059
Csa1G039940	Cucurbita moschata (Rifu)	cmocuB077
Csa1G039940	Cucurbita moschata (Rifu)	cmocuB202
Csa1G039940	Cucurbita moschata (Rifu)	cmocuB380
Csa1G039940	Cucurbita moschata (Rifu)	cmocuB394
Csa1G039940	Cucurbita moschata (Rifu)	cmocuB420
Csa1G039940	Melon (DHL92) v3.5.1	cumeB056
Csa1G039940	Watermelon (Charleston Gray)	cuwcgB083
Csa1G039940	Watermelon (Charleston Gray)	cuwcgB088
Csa1G039940	Watermelon (97103) v1	cuwmB034
Csa1G039940	Watermelon (97103) v1	cuwmB096
Csa1G039940	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G039940	Cucurbita pepo (Zucchini)	cpecuB357
Csa1G039940	Cucurbita pepo (Zucchini)	cpecuB505
Csa1G039940	Cucurbita pepo (Zucchini)	cpecuB655
Csa1G039940	Bottle gourd (USVL1VR-Ls)	culsiB072
Csa1G039940	Bottle gourd (USVL1VR-Ls)	culsiB083
Csa1G039940	Cucumber (Gy14) v2	cgybcuB004
Csa1G039940	Cucumber (Gy14) v2	cgybcuB013
Csa1G039940	Cucumber (Gy14) v2	cgybcuB157