Lsi01G020700 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G020700
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_43
Locationchr01 : 29106051 .. 29106959 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCATCTCTGAAATTCCGCCAAGACCAGAAACCATTATTGAGAGCCAAAATCCCTCTCAGTATTCTAGGTCTTCCTTTCCAATCCGCCATAGCCGCCGGCAACTCCAAAGACCTCACTCTCAAACTCTCAACCCTCTTCGAATCCGGCCCCTCTTTCAACCTCGCTTATCGCCCCAACGATTCTTCAAACCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCGCCTTCGGTTCCCCAATCTCTTCCCCCATGCTCATGAGCGCCGAGTTCAATCTAATCGCCTCTGGAAATCCCTCCTTCATGCTCCATTTCAAGCCAAAATTCGGCGATTTCTCCATCAAGAAATCGCAGTCCTCGTCCGTGATGTTCCAGAAGGTTCTCAAATCGGAGGACGAATCTGTGGATGTTAAAACTGCTGTTTCTAAGGCGGTTTCCGGTTTGGATGTGGCAGCTAGTACGGCGGTTCCGATTCTGAAATCCGCCGCCGTGAGGTTTCGTTGGGGTCTTAGAGTTCCGGCGGTGGTGGCGGCGGAGGGGATGAAGATGAGTGGTGGGATTTCGTTTCGGGAGGCTCCGCTTATGGTGCTGGATAAGATCGGGTTCGAACACGTGGACGGTGGAGATTCGAGTACAAAGGAGGGTAGTTTGGGAAATGGGGATATGAATTTGGATTTGGATTGTTTTTCAGTGAAACGTCAGTTTGAGGTTTTGAAAATAGAGAATGGGTTATTGAAAAAAAGCATTGATGATCTTAGGAAGCAAATGAAATTGTTGTCCAATTCCGGCCGCTGGTTCAAGGACAGAAAGACGCCGGAGTTAGGCGGTTGTGATGGGCTGCTGCCAGAAGACTTGGCGGCGCCGGGGAGTGAGGAACTGAGGAAACCGGCGCTGTCCAGTGCCTGA

mRNA sequence

ATGAAAGCATCTCTGAAATTCCGCCAAGACCAGAAACCATTATTGAGAGCCAAAATCCCTCTCAGTATTCTAGGTCTTCCTTTCCAATCCGCCATAGCCGCCGGCAACTCCAAAGACCTCACTCTCAAACTCTCAACCCTCTTCGAATCCGGCCCCTCTTTCAACCTCGCTTATCGCCCCAACGATTCTTCAAACCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCGCCTTCGGTTCCCCAATCTCTTCCCCCATGCTCATGAGCGCCGAGTTCAATCTAATCGCCTCTGGAAATCCCTCCTTCATGCTCCATTTCAAGCCAAAATTCGGCGATTTCTCCATCAAGAAATCGCAGTCCTCGTCCGTGATGTTCCAGAAGGTTCTCAAATCGGAGGACGAATCTGTGGATGTTAAAACTGCTGTTTCTAAGGCGGTTTCCGGTTTGGATGTGGCAGCTAGTACGGCGGTTCCGATTCTGAAATCCGCCGCCGTGAGGTTTCGTTGGGGTCTTAGAGTTCCGGCGGTGGTGGCGGCGGAGGGGATGAAGATGAGTGGTGGGATTTCGTTTCGGGAGGCTCCGCTTATGGTGCTGGATAAGATCGGGTTCGAACACGTGGACGGTGGAGATTCGAGTACAAAGGAGGGTAGTTTGGGAAATGGGGATATGAATTTGGATTTGGATTGTTTTTCAGTGAAACGTCAGTTTGAGGTTTTGAAAATAGAGAATGGGTTATTGAAAAAAAGCATTGATGATCTTAGGAAGCAAATGAAATTGTTGTCCAATTCCGGCCGCTGGTTCAAGGACAGAAAGACGCCGGAGTTAGGCGGTTGTGATGGGCTGCTGCCAGAAGACTTGGCGGCGCCGGGGAGTGAGGAACTGAGGAAACCGGCGCTGTCCAGTGCCTGA

Coding sequence (CDS)

ATGAAAGCATCTCTGAAATTCCGCCAAGACCAGAAACCATTATTGAGAGCCAAAATCCCTCTCAGTATTCTAGGTCTTCCTTTCCAATCCGCCATAGCCGCCGGCAACTCCAAAGACCTCACTCTCAAACTCTCAACCCTCTTCGAATCCGGCCCCTCTTTCAACCTCGCTTATCGCCCCAACGATTCTTCAAACCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCGCCTTCGGTTCCCCAATCTCTTCCCCCATGCTCATGAGCGCCGAGTTCAATCTAATCGCCTCTGGAAATCCCTCCTTCATGCTCCATTTCAAGCCAAAATTCGGCGATTTCTCCATCAAGAAATCGCAGTCCTCGTCCGTGATGTTCCAGAAGGTTCTCAAATCGGAGGACGAATCTGTGGATGTTAAAACTGCTGTTTCTAAGGCGGTTTCCGGTTTGGATGTGGCAGCTAGTACGGCGGTTCCGATTCTGAAATCCGCCGCCGTGAGGTTTCGTTGGGGTCTTAGAGTTCCGGCGGTGGTGGCGGCGGAGGGGATGAAGATGAGTGGTGGGATTTCGTTTCGGGAGGCTCCGCTTATGGTGCTGGATAAGATCGGGTTCGAACACGTGGACGGTGGAGATTCGAGTACAAAGGAGGGTAGTTTGGGAAATGGGGATATGAATTTGGATTTGGATTGTTTTTCAGTGAAACGTCAGTTTGAGGTTTTGAAAATAGAGAATGGGTTATTGAAAAAAAGCATTGATGATCTTAGGAAGCAAATGAAATTGTTGTCCAATTCCGGCCGCTGGTTCAAGGACAGAAAGACGCCGGAGTTAGGCGGTTGTGATGGGCTGCTGCCAGAAGACTTGGCGGCGCCGGGGAGTGAGGAACTGAGGAAACCGGCGCTGTCCAGTGCCTGA

Protein sequence

MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRPNDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQSSSVMFQKVLKSEDESVDVKTAVSKAVSGLDVAASTAVPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTKEGSLGNGDMNLDLDCFSVKRQFEVLKIENGLLKKSIDDLRKQMKLLSNSGRWFKDRKTPELGGCDGLLPEDLAAPGSEELRKPALSSA
Homology
[Close]
BLAST of Lsi01G020700 vs. TrEMBL
Match: A0A0A0KZ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507970 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 6.6e-137
Identity = 261/302 (86.42%), Postives = 278/302 (92.05%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR+DQKPLLRAKIPL+ILGLPFQSAIAAG SK+LTLKLST FESGPSFNLAYRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTHFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           NDSSNPFSVIVKTGI +FGSP SSPMLMSAEFNLIASGNP+FMLHFKPKFGDF++KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPTSSPMLMSAEFNLIASGNPTFMLHFKPKFGDFTVKKSQS 120

Query: 121 SSVMFQKVLKSEDESVDVKTAVSKAVSGLDVAASTAVPILKSAAVRFRWGLRVPAVVAAE 180
           SSVMFQKVLKSE+ESVDVKTAVSKAV GL V+ASTAVPI+KS AVR RWGLRVP   AAE
Sbjct: 121 SSVMFQKVLKSEEESVDVKTAVSKAVLGLKVSASTAVPIMKSGAVRVRWGLRVP---AAE 180

Query: 181 GMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTKEGSLGNGDMNLDLDCFSVKRQFEVLK 240
           GMKM GGISFRE P MVLDKIGFEHVDGGD+STKEGSLGNGD+NLD DCFSVKRQFEVLK
Sbjct: 181 GMKMGGGISFREVPFMVLDKIGFEHVDGGDTSTKEGSLGNGDLNLDSDCFSVKRQFEVLK 240

Query: 241 IENGLLKKSIDDLRKQMKLLSNSGRWFKDRKTPELGGCDGLLPEDLAAPGSEELRKPALS 300
           +ENGLL+KSIDDLRK+MKL SNSG  +KDRK PELGG DGL P+D AA G EELRKPALS
Sbjct: 241 LENGLLRKSIDDLRKKMKLFSNSGSRYKDRKGPELGGFDGLPPDDTAA-GVEELRKPALS 298

Query: 301 SA 303
           SA
Sbjct: 301 SA 298

[Close]
BLAST of Lsi01G020700 vs. TrEMBL
Match: B9SN52_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0313070 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.8e-73
Identity = 163/306 (53.27%), Postives = 205/306 (66.99%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR++QKPL RAK+PL+ILGLPFQS I AG SK+LTL LST FESGPS  +AYRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLTILGLPFQSGIVAGESKELTLNLSTFFESGPSIKIAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           ND  NPFS++VKTG+GAFGSPISS +LMSAEFNL++ GNPSFMLHFKPKFGDFSIKKSQS
Sbjct: 61  NDVFNPFSLVVKTGMGAFGSPISSSLLMSAEFNLLSIGNPSFMLHFKPKFGDFSIKKSQS 120

Query: 121 SSVMFQKVLK--------SEDESVDV----------------------KTAVSKAVSGLD 180
           SS  F K           ++D S++V                       +A+  A SG++
Sbjct: 121 SSA-FDKNGNWTGSLDNLNDDGSIEVVDSPVLSNGLSEKKIRVLPQPTASAIVGAFSGVE 180

Query: 181 VAASTAVPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGD 240
           V AST +P+   A + FRWG+RVPA + +       GI+FR  P +V++KIG EHVD  D
Sbjct: 181 VTASTKLPVRSRAMMNFRWGVRVPAEIKSGSSDSMAGINFRNIPFLVMNKIGIEHVDSCD 240

Query: 241 SSTKEG---------SLGNGDMNLDL--DCFSVKRQFEVLKIENGLLKKSIDDLRKQMKL 266
            S  +G          LG+   N+D+   C SVK+Q EVL+ ENGLLKK++DDLR+++  
Sbjct: 241 DSKSKGKVMTPLNVTKLGSELRNVDMAEACLSVKKQMEVLQAENGLLKKAVDDLRQEI-- 300

[Close]
BLAST of Lsi01G020700 vs. TrEMBL
Match: V4SVP9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012101mg PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.4e-72
Identity = 154/291 (52.92%), Postives = 209/291 (71.82%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR++QKPL RAK+PLSILGLPF+S I AG S++L+L LST FESGPS  + YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESGPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEFNL+  GNP+FMLHFKP+FGDFSIKKSQS
Sbjct: 61  NDTWNPFSLIVKTGTGPFGSPVSSTMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSVMFQK---------VLKSEDESVDVKTA----------------VSKAVSGLDVAAST 180
           S V+ QK         VL+++D S++V  +                 +  ++G+++AA+T
Sbjct: 121 S-VLDQKAILKAPNGGVLENDDASIEVVESPMLKKITVLPSRAAGEFAGVLAGVEMAATT 180

Query: 181 AVPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTKE 240
           A+P+   A V FRWG+RVPA + +E   ++ GI+F++ P +V++KIG EHVDG DS  K 
Sbjct: 181 ALPVRSRAVVNFRWGVRVPAEITSE---LTAGINFKKMPYLVMNKIGIEHVDGADSKEKT 240

Query: 241 ---------GSLGNGDMNLDLDCFSVKRQFEVLKIENGLLKKSIDDLRKQM 258
                    G  G GD+ +++ CF++KRQ E+L+ ENGLLKK+++DLR+++
Sbjct: 241 SKKEAGQELGITGRGDV-VEV-CFNLKRQMEILQSENGLLKKAVEDLRREI 285

[Close]
BLAST of Lsi01G020700 vs. TrEMBL
Match: M5VQ79_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008454mg PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-70
Identity = 161/300 (53.67%), Postives = 202/300 (67.33%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKAS+KFR+DQKPLLRAK+PLSILGLPFQS I AG SK+LTL L T FESGPS  + YRP
Sbjct: 1   MKASVKFREDQKPLLRAKVPLSILGLPFQSGIVAGESKELTLNLGTFFESGPSIRVGYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASG-NPSFMLHFKPKFGDFSIKKSQ 120
           NDSSNPFS++VKTG G FGSPISS MLMSAEFNL+ SG NPSFMLHFKP+FGDFSIKKSQ
Sbjct: 61  NDSSNPFSLVVKTGTGPFGSPISSSMLMSAEFNLLGSGKNPSFMLHFKPQFGDFSIKKSQ 120

Query: 121 SSSVMFQKVLKSEDESVDVKT-AVSKA----------------------VSGLDVAASTA 180
           SS  +FQK++   D  V  +T AV  A                       SG+++AA T+
Sbjct: 121 SS--VFQKIVSPADGVVSAETPAVDTAFMGKKITVLPSENQVAGILAGVFSGVEMAARTS 180

Query: 181 VPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTK-- 240
           +P+     V  RWG+RVPA + + G   +  I+F + P +V++KIG EHVD  DS  K  
Sbjct: 181 MPVWNRGVVNLRWGVRVPAEMKSTG---ANPIAFHKIPFLVMNKIGIEHVDVADSKGKTT 240

Query: 241 ------EGSLGNGDMNLDLDCFSVKRQFEVLKIENGLLKKSIDDLRKQM----KLLSNSG 265
                 +G    G+  +   CF+VKRQ E L+ ENGLL+K+++DLR+++    K +SNSG
Sbjct: 241 KAAEMEKGLTFPGNAEVAEACFTVKRQLEALQSENGLLRKAVEDLRQEIAGATKSISNSG 295

[Close]
BLAST of Lsi01G020700 vs. TrEMBL
Match: A0A067E8E4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043464mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.4e-70
Identity = 152/289 (52.60%), Postives = 203/289 (70.24%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR++QKPL RAK+PLSILGLPF+S I AG S++L+L LST FES PS  + YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESWPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEFNL+  GNP+FMLHFKP+FGDFSIKKSQS
Sbjct: 61  NDAWNPFSLIVKTGTGPFGSPVSSSMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSVMFQK---------VLKSEDESVDVKTA----------------VSKAVSGLDVAAST 180
           S V+ QK         VL+++D S++V  +                 +  ++G+D+ A+T
Sbjct: 121 S-VLDQKAILKAPNGGVLENDDTSIEVVESPMLKKITVLPSRAAGEFAGVLAGVDMVATT 180

Query: 181 AVPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTKE 240
           A+P+   A V FRWG+RVPA + +E    + GI+F++ P +V++KIG EHVDG DS  K 
Sbjct: 181 ALPVRSRAVVNFRWGVRVPAEITSES---TAGINFKKMPYLVMNKIGVEHVDGADSKEKT 240

Query: 241 G------SLG-NGDMNLDLDCFSVKRQFEVLKIENGLLKKSIDDLRKQM 258
                   LG  G  ++   CF++KRQ E+L+ ENGLLKK+++DLR+++
Sbjct: 241 SKKEAGQQLGITGKADVVEVCFNLKRQMEILQSENGLLKKAVEDLRREI 285

[Close]
BLAST of Lsi01G020700 vs. TAIR10
Match: AT3G57990.1 (AT3G57990.1 unknown protein)

HSP 1 Score: 234.6 bits (597), Expect = 8.2e-62
Identity = 140/288 (48.61%), Postives = 182/288 (63.19%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKAS+KFR++QKPL RAK+PLSILGLPFQS I AG SK+L+L LST FESGPS  +AYRP
Sbjct: 1   MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           NDS NPFS+IVKTG G+FGSPISS MLMSAEFNL+  GNPSFMLHFKP+FGDFSIKKS S
Sbjct: 61  NDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHS 120

Query: 121 SSVMFQKVLKSEDESV-----DVKTAVSKAVSG-------LDVAASTAVPILKS------ 180
           SS   + ++KS + SV      ++   + AV+G       + V  ST+   +        
Sbjct: 121 SSGFERNLIKSMNGSVSEDDSSIEVVDTPAVNGCGGGFRKVTVLPSTSAGDIAGLLSGVE 180

Query: 181 ------------AAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGD 240
                       A + FRWG+RVP  +  +    +  IS R  P +V++KIG EHVDG D
Sbjct: 181 VAARTSLPVRGRAVLNFRWGVRVPTEIRRD-FDPTAAISLRRFPFLVMNKIGIEHVDGAD 240

Query: 241 SSTKEGSLGNGDMNLDLDCFS---VKRQFEVLKIENGLLKKSIDDLRK 256
           +   + +   G ++      +   V    E L+ EN  LK++++DLR+
Sbjct: 241 AKVTKSTGDPGKVSGPAQFTTSGDVAEVIEELRTENKQLKRAVEDLRE 287

[Close]
BLAST of Lsi01G020700 vs. NCBI nr
Match: gi|659082902|ref|XP_008442091.1| (PREDICTED: uncharacterized protein LOC103486052 [Cucumis melo])

HSP 1 Score: 498.0 bits (1281), Expect = 1.1e-137
Identity = 263/302 (87.09%), Postives = 276/302 (91.39%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR+DQKPLLRAKIPL+ILGLPFQSAIAAG SK+LTLKLSTLFESGPSFNLAYRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTLFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           NDSSNPFSVIVKTGI +FGSPISSPMLMSAEFNLIASGNP+FMLHFKPK GDFS+KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPISSPMLMSAEFNLIASGNPTFMLHFKPKLGDFSVKKSQS 120

Query: 121 SSVMFQKVLKSEDESVDVKTAVSKAVSGLDVAASTAVPILKSAAVRFRWGLRVPAVVAAE 180
           SSVMFQKV KSE+E VDVKTAVSKAVSGL+VA STAVPI+KS AVRFRWGLRVP   AAE
Sbjct: 121 SSVMFQKVPKSEEEPVDVKTAVSKAVSGLEVAVSTAVPIMKSGAVRFRWGLRVP---AAE 180

Query: 181 GMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTKEGSLGNGDMNLDLDCFSVKRQFEVLK 240
           GMKMSGGISFRE P MV+DKIGFEHVDGGD STKEGSLGNGD+NLD DCFSVKRQFEVLK
Sbjct: 181 GMKMSGGISFREVPFMVMDKIGFEHVDGGDMSTKEGSLGNGDLNLDSDCFSVKRQFEVLK 240

Query: 241 IENGLLKKSIDDLRKQMKLLSNSGRWFKDRKTPELGGCDGLLPEDLAAPGSEELRKPALS 300
           +ENGLLKKSIDDLRKQMKL SNSGR   DR  PELGG DGL P+D AA G EELRKPAL 
Sbjct: 241 LENGLLKKSIDDLRKQMKLFSNSGRRLNDRNAPELGGFDGLPPDDKAA-GVEELRKPALP 298

Query: 301 SA 303
           SA
Sbjct: 301 SA 298

[Close]
BLAST of Lsi01G020700 vs. NCBI nr
Match: gi|449457293|ref|XP_004146383.1| (PREDICTED: uncharacterized protein LOC101215302 [Cucumis sativus])

HSP 1 Score: 495.0 bits (1273), Expect = 9.5e-137
Identity = 261/302 (86.42%), Postives = 278/302 (92.05%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR+DQKPLLRAKIPL+ILGLPFQSAIAAG SK+LTLKLST FESGPSFNLAYRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTHFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           NDSSNPFSVIVKTGI +FGSP SSPMLMSAEFNLIASGNP+FMLHFKPKFGDF++KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPTSSPMLMSAEFNLIASGNPTFMLHFKPKFGDFTVKKSQS 120

Query: 121 SSVMFQKVLKSEDESVDVKTAVSKAVSGLDVAASTAVPILKSAAVRFRWGLRVPAVVAAE 180
           SSVMFQKVLKSE+ESVDVKTAVSKAV GL V+ASTAVPI+KS AVR RWGLRVP   AAE
Sbjct: 121 SSVMFQKVLKSEEESVDVKTAVSKAVLGLKVSASTAVPIMKSGAVRVRWGLRVP---AAE 180

Query: 181 GMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTKEGSLGNGDMNLDLDCFSVKRQFEVLK 240
           GMKM GGISFRE P MVLDKIGFEHVDGGD+STKEGSLGNGD+NLD DCFSVKRQFEVLK
Sbjct: 181 GMKMGGGISFREVPFMVLDKIGFEHVDGGDTSTKEGSLGNGDLNLDSDCFSVKRQFEVLK 240

Query: 241 IENGLLKKSIDDLRKQMKLLSNSGRWFKDRKTPELGGCDGLLPEDLAAPGSEELRKPALS 300
           +ENGLL+KSIDDLRK+MKL SNSG  +KDRK PELGG DGL P+D AA G EELRKPALS
Sbjct: 241 LENGLLRKSIDDLRKKMKLFSNSGSRYKDRKGPELGGFDGLPPDDTAA-GVEELRKPALS 298

Query: 301 SA 303
           SA
Sbjct: 301 SA 298

[Close]
BLAST of Lsi01G020700 vs. NCBI nr
Match: gi|255572981|ref|XP_002527421.1| (PREDICTED: uncharacterized protein LOC8266978 [Ricinus communis])

HSP 1 Score: 282.3 bits (721), Expect = 9.7e-73
Identity = 163/306 (53.27%), Postives = 205/306 (66.99%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKASLKFR++QKPL RAK+PL+ILGLPFQS I AG SK+LTL LST FESGPS  +AYRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLTILGLPFQSGIVAGESKELTLNLSTFFESGPSIKIAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASGNPSFMLHFKPKFGDFSIKKSQS 120
           ND  NPFS++VKTG+GAFGSPISS +LMSAEFNL++ GNPSFMLHFKPKFGDFSIKKSQS
Sbjct: 61  NDVFNPFSLVVKTGMGAFGSPISSSLLMSAEFNLLSIGNPSFMLHFKPKFGDFSIKKSQS 120

Query: 121 SSVMFQKVLK--------SEDESVDV----------------------KTAVSKAVSGLD 180
           SS  F K           ++D S++V                       +A+  A SG++
Sbjct: 121 SSA-FDKNGNWTGSLDNLNDDGSIEVVDSPVLSNGLSEKKIRVLPQPTASAIVGAFSGVE 180

Query: 181 VAASTAVPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGD 240
           V AST +P+   A + FRWG+RVPA + +       GI+FR  P +V++KIG EHVD  D
Sbjct: 181 VTASTKLPVRSRAMMNFRWGVRVPAEIKSGSSDSMAGINFRNIPFLVMNKIGIEHVDSCD 240

Query: 241 SSTKEG---------SLGNGDMNLDL--DCFSVKRQFEVLKIENGLLKKSIDDLRKQMKL 266
            S  +G          LG+   N+D+   C SVK+Q EVL+ ENGLLKK++DDLR+++  
Sbjct: 241 DSKSKGKVMTPLNVTKLGSELRNVDMAEACLSVKKQMEVLQAENGLLKKAVDDLRQEI-- 300

[Close]
BLAST of Lsi01G020700 vs. NCBI nr
Match: gi|694314087|ref|XP_009369634.1| (PREDICTED: uncharacterized protein LOC103959022 [Pyrus x bretschneideri])

HSP 1 Score: 281.6 bits (719), Expect = 1.7e-72
Identity = 154/288 (53.47%), Postives = 202/288 (70.14%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKAS+KFR+DQKPLLRAK+PLSILGLPFQS I AG SK+LTL L+T FESGPS  +AYRP
Sbjct: 1   MKASVKFREDQKPLLRAKVPLSILGLPFQSGIVAGESKELTLNLATYFESGPSIKIAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASG-NPSFMLHFKPKFGDFSIKKSQ 120
           ND+ NPFS+ +KTG G+FGSPISS MLMSAEFNL+A G NPSFMLHFKP+FGDFSIKK+Q
Sbjct: 61  NDAWNPFSLAIKTGTGSFGSPISSSMLMSAEFNLLARGRNPSFMLHFKPQFGDFSIKKTQ 120

Query: 121 SSSVMFQKVLKSEDESVDVKTAVSKA-----------------------VSGLDVAASTA 180
           SS  +F+K++ SE ++V  +T V +A                        +G++VAA T+
Sbjct: 121 SS--VFEKIVGSEKDAVAAETPVVEAEFSGKKITVLPSESPAAGLLAGLFTGMEVAARTS 180

Query: 181 VPILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTK-- 240
           +P+   A V  RWG++VPA + + G+  + GI+F + P +V++KIG EHVDGGDS  K  
Sbjct: 181 MPVRNRAVVNLRWGVKVPAEIKSAGVNPTAGIAFPKIPFLVMNKIGIEHVDGGDSKAKTT 240

Query: 241 EGSLGN-----GDMNLDLDCFSVKRQFEVLKIENGLLKKSIDDLRKQM 258
           + +  N     G   +   CF VK Q E L+ ENGLL+K+++DLR ++
Sbjct: 241 KAAADNALTFPGSAEVAEACFRVKHQLEALRTENGLLRKAVEDLRHEI 286

[Close]
BLAST of Lsi01G020700 vs. NCBI nr
Match: gi|657990079|ref|XP_008387262.1| (PREDICTED: uncharacterized protein LOC103449712 [Malus domestica])

HSP 1 Score: 280.8 bits (717), Expect = 2.8e-72
Identity = 153/287 (53.31%), Postives = 203/287 (70.73%), Query Frame = 1 

Query: 1   MKASLKFRQDQKPLLRAKIPLSILGLPFQSAIAAGNSKDLTLKLSTLFESGPSFNLAYRP 60
           MKAS+KFR+DQKPLLRAK+PLSILGLPFQS I AG SK+LTL L+T FESGPS  +AYRP
Sbjct: 1   MKASVKFREDQKPLLRAKVPLSILGLPFQSGIVAGESKELTLNLATFFESGPSIKIAYRP 60

Query: 61  NDSSNPFSVIVKTGIGAFGSPISSPMLMSAEFNLIASG-NPSFMLHFKPKFGDFSIKKSQ 120
           ND+ NPFS++VKTG G+FGSPISS MLMSAEFNL+  G +PSFMLHFKP+FGDFSIKK+Q
Sbjct: 61  NDAWNPFSLVVKTGTGSFGSPISSSMLMSAEFNLLDRGRSPSFMLHFKPQFGDFSIKKTQ 120

Query: 121 SSSVMFQKVLKSEDESVDVKTAVSKA----------------------VSGLDVAASTAV 180
           SS  +F+K++ SE ++V  +T V +A                       +G++VAA T++
Sbjct: 121 SS--VFEKIVGSEKDAVAAETPVVEAEFSGKRXVLSSASLAAGVLARLFTGMEVAARTSM 180

Query: 181 PILKSAAVRFRWGLRVPAVVAAEGMKMSGGISFREAPLMVLDKIGFEHVDGGDSSTK--E 240
           P+   A V  RWG++VP  + + G+  + GI+F++ P +V++KIG EHVDGGDS  K  +
Sbjct: 181 PVRNRAVVNLRWGVKVPXEIKSAGVNPTAGIAFQKIPFLVMNKIGIEHVDGGDSKAKTTK 240

Query: 241 GSLGN-----GDMNLDLDCFSVKRQFEVLKIENGLLKKSIDDLRKQM 258
            +  N     G+  +   CF VK Q E L+ ENGLL+KS++DLR ++
Sbjct: 241 AAADNALTFPGNAEVAEACFRVKHQLEALRTENGLLRKSVEDLRHEI 285

The following BLAST results are available for this feature:
BLAST of Lsi01G020700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi01G020700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ92_CUCSA6.6e-13786.42Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507970 PE=4 SV=1[more]
B9SN52_RICCO6.8e-7353.27Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0313070 PE=4 SV=1[more]
V4SVP9_9ROSI3.4e-7252.92Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012101mg PE=4 SV=1[more]
M5VQ79_PRUPE1.1e-7053.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008454mg PE=4 SV=1[more]
A0A067E8E4_CITSI2.4e-7052.60Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043464mg PE=4 SV=1[more]
BLAST of Lsi01G020700 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57990.18.2e-6248.61 unknown protein[more]
BLAST of Lsi01G020700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082902|ref|XP_008442091.1|1.1e-13787.09PREDICTED: uncharacterized protein LOC103486052 [Cucumis melo][more]
gi|449457293|ref|XP_004146383.1|9.5e-13786.42PREDICTED: uncharacterized protein LOC101215302 [Cucumis sativus][more]
gi|255572981|ref|XP_002527421.1|9.7e-7353.27PREDICTED: uncharacterized protein LOC8266978 [Ricinus communis][more]
gi|694314087|ref|XP_009369634.1|1.7e-7253.47PREDICTED: uncharacterized protein LOC103959022 [Pyrus x bretschneideri][more]
gi|657990079|ref|XP_008387262.1|2.8e-7253.31PREDICTED: uncharacterized protein LOC103449712 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G020700.1Lsi01G020700.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34285FAMILY NOT NAMEDcoord: 2..254
score: 8.0E
NoneNo IPR availablePANTHERPTHR34285:SF3SUBFAMILY NOT NAMEDcoord: 2..254
score: 8.0E