CmoCh03G000010 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G000010
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	BnaC08g28920D protein
Location	Cmo_Chr03 : 48194 .. 49093 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCATCTCTGAAATTCCGCGAAGATCAGAAGCCATTATTGAGAGCCAAAGTCCCTCTCAGCATTCTTGGCCTCCCTTTCCAATCCGCCATAGCCGCCGGCACCGCCAAAGACCTCTCTCTCAACCTCTCAACCCTCTTCGAATCCGGCCCCTCCTTCAAACTCTCTTATCGCCCTAACGATTCTTCAAATCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCTCCTTCGGCTCCCCGATCTCTTCGCCTATGCTCATGAGCGCCGAATTCGACCTAATCGGCCGTGGAAACCCCTCCTTCATGCTCCATTTCAAGCCGAAACTCGGCGATTTCTCGATCAAGAAATCGCAGTCCTCCTCGATGATGTTCCAGAAGGTTCTGAAATCGGAGGAGGAATCTGTGGATGTTAGAAGTGCTGTTTCGAAGGCGGTTTCTGGTTTGGAAGTGGCTGCTAGTACGGCGGTTCCGATTCTGAGTTGTGCGGCGGTGAGGTTCCGATGGGGGCTTAAGGTCCCAGCGGCGGAGGGGATGAAGGTGAGTGGTGGGATTTCGTTTCGGGCGGCTCCATTGCTGTTGCTGGATAAGATCGGGATCGAACACGTGGAGAGTGGGGATTCGAGATCGGAGAAGGGTAGTTTCGGAAATGAGGATTTGGATTTGGGTTATTTTTCAGTGAAGCGTCAGTTCGATGTTTTGCAAATGGAGAATGGGCTTTTGAAAAGGGGGATTGAGGATTTGAGGAAGCAAATGAAATTGTTTTCCAATTCCGGCGACTCCGACCGGAAGGCGGCCCGGCGGTTTAAGGACAGAAAGGCGCCAGAGTTCCCCGGTCTTGATGGGCCACCGTCGGTGGAGGCGGTGGCCGCCGAGGAAGGCAGCAGCGTTAGTGCTTGA

mRNA sequence

ATGAAAGCATCTCTGAAATTCCGCGAAGATCAGAAGCCATTATTGAGAGCCAAAGTCCCTCTCAGCATTCTTGGCCTCCCTTTCCAATCCGCCATAGCCGCCGGCACCGCCAAAGACCTCTCTCTCAACCTCTCAACCCTCTTCGAATCCGGCCCCTCCTTCAAACTCTCTTATCGCCCTAACGATTCTTCAAATCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCTCCTTCGGCTCCCCGATCTCTTCGCCTATGCTCATGAGCGCCGAATTCGACCTAATCGGCCGTGGAAACCCCTCCTTCATGCTCCATTTCAAGCCGAAACTCGGCGATTTCTCGATCAAGAAATCGCAGTCCTCCTCGATGATGTTCCAGAAGGTTCTGAAATCGGAGGAGGAATCTGTGGATGTTAGAAGTGCTGTTTCGAAGGCGGTTTCTGGTTTGGAAGTGGCTGCTAGTACGGCGGTTCCGATTCTGAGTTGTGCGGCGGTGAGGTTCCGATGGGGGCTTAAGGTCCCAGCGGCGGAGGGGATGAAGGTGAGTGGTGGGATTTCGTTTCGGGCGGCTCCATTGCTGTTGCTGGATAAGATCGGGATCGAACACGTGGAGAGTGGGGATTCGAGATCGGAGAAGGGTAGTTTCGGAAATGAGGATTTGGATTTGGGTTATTTTTCAGTGAAGCGTCAGTTCGATGTTTTGCAAATGGAGAATGGGCTTTTGAAAAGGGGGATTGAGGATTTGAGGAAGCAAATGAAATTGTTTTCCAATTCCGGCGACTCCGACCGGAAGGCGGCCCGGCGGTTTAAGGACAGAAAGGCGCCAGAGTTCCCCGGTCTTGATGGGCCACCGTCGGTGGAGGCGGTGGCCGCCGAGGAAGGCAGCAGCGTTAGTGCTTGA

Coding sequence (CDS)

ATGAAAGCATCTCTGAAATTCCGCGAAGATCAGAAGCCATTATTGAGAGCCAAAGTCCCTCTCAGCATTCTTGGCCTCCCTTTCCAATCCGCCATAGCCGCCGGCACCGCCAAAGACCTCTCTCTCAACCTCTCAACCCTCTTCGAATCCGGCCCCTCCTTCAAACTCTCTTATCGCCCTAACGATTCTTCAAATCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCTCCTTCGGCTCCCCGATCTCTTCGCCTATGCTCATGAGCGCCGAATTCGACCTAATCGGCCGTGGAAACCCCTCCTTCATGCTCCATTTCAAGCCGAAACTCGGCGATTTCTCGATCAAGAAATCGCAGTCCTCCTCGATGATGTTCCAGAAGGTTCTGAAATCGGAGGAGGAATCTGTGGATGTTAGAAGTGCTGTTTCGAAGGCGGTTTCTGGTTTGGAAGTGGCTGCTAGTACGGCGGTTCCGATTCTGAGTTGTGCGGCGGTGAGGTTCCGATGGGGGCTTAAGGTCCCAGCGGCGGAGGGGATGAAGGTGAGTGGTGGGATTTCGTTTCGGGCGGCTCCATTGCTGTTGCTGGATAAGATCGGGATCGAACACGTGGAGAGTGGGGATTCGAGATCGGAGAAGGGTAGTTTCGGAAATGAGGATTTGGATTTGGGTTATTTTTCAGTGAAGCGTCAGTTCGATGTTTTGCAAATGGAGAATGGGCTTTTGAAAAGGGGGATTGAGGATTTGAGGAAGCAAATGAAATTGTTTTCCAATTCCGGCGACTCCGACCGGAAGGCGGCCCGGCGGTTTAAGGACAGAAAGGCGCCAGAGTTCCCCGGTCTTGATGGGCCACCGTCGGTGGAGGCGGTGGCCGCCGAGGAAGGCAGCAGCGTTAGTGCTTGA

Homology

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BLAST of CmoCh03G000010 vs. TrEMBL
Match: A0A0A0KZ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507970 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 6.2e-111
Identity = 216/296 (72.97%), Postives = 250/296 (84.46%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPLLRAK+PL+ILGLPFQSAIAAGT+K+L+L LST FESGPSF L+YRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTHFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDSSNPFSVIVKTGI SFGSP SSPMLMSAEF+LI  GNP+FMLHFKPK GDF++KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPTSSPMLMSAEFNLIASGNPTFMLHFKPKFGDFTVKKSQS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMK 180
           SS+MFQKVLKSEEESVDV++AVSKAV GL+V+ASTAVPI+   AVR RWGL+VPAAEGMK
Sbjct: 121 SSVMFQKVLKSEEESVDVKTAVSKAVLGLKVSASTAVPIMKSGAVRVRWGLRVPAAEGMK 180

Query: 181 VSGGISFRAAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDL--GYFSVKRQFDVLQMEN 240
           + GGISFR  P ++LDKIG EHV+ GD+ +++GS GN DL+L    FSVKRQF+VL++EN
Sbjct: 181 MGGGISFREVPFMVLDKIGFEHVDGGDTSTKEGSLGNGDLNLDSDCFSVKRQFEVLKLEN 240

Query: 241 GLLKRGIEDLRKQMKLFSNSGDSDRKAARRFKDRKAPEFPGLDG-PPSVEAVAAEE 294
           GLL++ I+DLRK+MKLFSNSG        R+KDRK PE  G DG PP   A   EE
Sbjct: 241 GLLRKSIDDLRKKMKLFSNSGS-------RYKDRKGPELGGFDGLPPDDTAAGVEE 289

[Close]

BLAST of CmoCh03G000010 vs. TrEMBL
Match: V4SVP9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012101mg PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.8e-71
Identity = 167/347 (48.13%), Postives = 228/347 (65.71%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FESGPS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESGPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDTWNPFSLIVKTGTGPFGSPVSSTMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-RSAVSKAVS---------------GLEVAASTA 180
           S +  + +LK+        ++ S++V  S + K ++               G+E+AA+TA
Sbjct: 121 SVLDQKAILKAPNGGVLENDDASIEVVESPMLKKITVLPSRAAGEFAGVLAGVEMAATTA 180

Query: 181 VPILSCAAVRFRWGLKVPAAEGMKVSGGISFRAAPLLLLDKIGIEHVESGDSR------- 240
           +P+ S A V FRWG++VPA    +++ GI+F+  P L+++KIGIEHV+  DS+       
Sbjct: 181 LPVRSRAVVNFRWGVRVPAEITSELTAGINFKKMPYLVMNKIGIEHVDGADSKEKTSKKE 240

Query: 241 --SEKGSFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIEDLRKQM-----KLFS---NSG 300
              E G  G  D+    F++KRQ ++LQ ENGLLK+ +EDLR+++       F+   NSG
Sbjct: 241 AGQELGITGRGDVVEVCFNLKRQMEILQSENGLLKKAVEDLRREILDGKSNPFNGDLNSG 300

[Close]

BLAST of CmoCh03G000010 vs. TrEMBL
Match: A0A067L9N3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24793 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.3e-70
Identity = 162/302 (53.64%), Postives = 201/302 (66.56%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPL RAKVPLS+LGLPFQS I AG +K+L+LNL+T FESGPS KL+YRP
Sbjct: 1   MKASLKFREDQKPLFRAKVPLSVLGLPFQSGIVAGESKELTLNLATFFESGPSIKLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG+G FGSP+SS MLMSAEF+L+GRGNPSFMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDTWNPFSLIVKTGMGQFGSPMSSSMLMSAEFNLLGRGNPSFMLHFKPRFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-----------------------------RSAVS 180
           SS MF+K   S         + S++V                               A++
Sbjct: 121 SS-MFEKTGNSVGTLENFDNDGSIEVVDNPTLKGGGVGATNGFSGKRISVLQPNTARAIA 180

Query: 181 KAVSGLEVAASTAVPILSCAAVRFRWGLKVPA--AEGMKVSG--GISFRAAPLLLLDKIG 240
            A SGLEV AST +P+ S A + FRWG++VPA    G       GI+FR  P L+++KIG
Sbjct: 181 GAFSGLEVTASTKLPVKSRAVMNFRWGVRVPAEIKSGFAADSTMGINFRKIPFLVMNKIG 240

Query: 241 IEHVESGDSRSE---------KGSFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIEDLRK 253
           IEHV+ G+S+SE              + D+     +VKRQ DVLQ ENGLLK+ +EDLR+
Sbjct: 241 IEHVD-GESKSEGAVATAKKTSSELTSTDMVEVCLTVKRQLDVLQAENGLLKKAVEDLRR 300

[Close]

BLAST of CmoCh03G000010 vs. TrEMBL
Match: U5GE46_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-69
Identity = 168/346 (48.55%), Postives = 212/346 (61.27%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+Q PL RAKVPLSI+GLPFQS I AG +K+LSLNLST FESGPSFK SYRP
Sbjct: 1   MKASLKFREEQNPLFRAKVPLSIIGLPFQSGIIAGESKELSLNLSTFFESGPSFKFSYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRG------NPSFMLHFKPKLGDFS 120
           ND+ NPFS+++KTG G FGSP+SS M+MSAEF+L+G+G      NPSFMLHFKP+ GDFS
Sbjct: 61  NDTWNPFSLVIKTGTGPFGSPVSSSMIMSAEFNLLGKGSNNNNLNPSFMLHFKPQFGDFS 120

Query: 121 IKKSQSSSMMFQK--------VLKSEEESVDV---------------------------- 180
           IKKSQSSS +           V   ++ SV+V                            
Sbjct: 121 IKKSQSSSHVSHVTRSIQNGGVSSDDDGSVEVVEPASPNTTPAVANGMFYGKRIAVLPPV 180

Query: 181 -RSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPA---AEGMKVSGGISFRAAPLLL 240
             SAV+   SGLEVAA T +P+ S A V FRWG++VPA   +   + + GI+FR  P L+
Sbjct: 181 TASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVPAEIKSGSGESTAGINFRKIPFLV 240

Query: 241 LDKIGIEHVESGDSRSEKG--------SFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIE 277
           ++K+GIEHV+ GD RS+K          FGN D+      VKRQ ++LQ ENG LK+ +E
Sbjct: 241 MNKVGIEHVDDGDGRSKKEGTTGKVGMEFGNSDVAEACLGVKRQLEILQSENGHLKKAVE 300

[Close]

BLAST of CmoCh03G000010 vs. TrEMBL
Match: B9HAC7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=2)

HSP 1 Score: 269.6 bits (688), Expect = 4.5e-69
Identity = 157/306 (51.31%), Postives = 198/306 (64.71%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+Q PL RAKVPLSI+GLPFQS I AG +K+LSLNLST FESGPSFK SYRP
Sbjct: 1   MKASLKFREEQNPLFRAKVPLSIIGLPFQSGIIAGESKELSLNLSTFFESGPSFKFSYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRG------NPSFMLHFKPKLGDFS 120
           ND+ NPFS+++KTG G FGSP+SS M+MSAEF+L+G+G      NPSFMLHFKP+ GDFS
Sbjct: 61  NDTWNPFSLVIKTGTGPFGSPVSSSMIMSAEFNLLGKGSNNNNLNPSFMLHFKPQFGDFS 120

Query: 121 IKKSQSSSMMFQK--------VLKSEEESVDV---------------------------- 180
           IKKSQSSS +           V   ++ SV+V                            
Sbjct: 121 IKKSQSSSHVSHVTRSIQNGGVSSDDDGSVEVVEPASPNTTPAVANGMFYGKRIAVLPPV 180

Query: 181 -RSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPA---AEGMKVSGGISFRAAPLLL 240
             SAV+   SGLEVAA T +P+ S A V FRWG++VPA   +   + + GI+FR  P L+
Sbjct: 181 TASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVPAEIKSGSGESTAGINFRKIPFLV 240

Query: 241 LDKIGIEHVESGDSRSEKG--------SFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIE 253
           ++K+GIEHV+ GD RS+K          FGN D+      VKRQ ++LQ ENG LK+ +E
Sbjct: 241 MNKVGIEHVDDGDGRSKKEGTTGKVGMEFGNSDVAEACLGVKRQLEILQSENGHLKKAVE 300

[Close]

BLAST of CmoCh03G000010 vs. TAIR10
Match: AT3G57990.1 (AT3G57990.1 unknown protein)

HSP 1 Score: 202.2 bits (513), Expect = 4.4e-52
Identity = 109/157 (69.43%), Postives = 128/157 (81.53%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKAS+KFRE+QKPL RAKVPLSILGLPFQS I AG +K+LSLNLST FESGPS K++YRP
Sbjct: 1   MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDS NPFS+IVKTG GSFGSPISS MLMSAEF+L+G+GNPSFMLHFKP+ GDFSIKKS S
Sbjct: 61  NDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAV 158
           SS   + ++KS      +  +VS+  S +EV  + AV
Sbjct: 121 SSGFERNLIKS------MNGSVSEDDSSIEVVDTPAV 151

[Close]

BLAST of CmoCh03G000010 vs. NCBI nr
Match: gi|659082902|ref|XP_008442091.1| (PREDICTED: uncharacterized protein LOC103486052 [Cucumis melo])

HSP 1 Score: 419.1 bits (1076), Expect = 6.6e-114
Identity = 223/296 (75.34%), Postives = 252/296 (85.14%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPLLRAK+PL+ILGLPFQSAIAAGT+K+L+L LSTLFESGPSF L+YRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTLFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDSSNPFSVIVKTGI SFGSPISSPMLMSAEF+LI  GNP+FMLHFKPKLGDFS+KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPISSPMLMSAEFNLIASGNPTFMLHFKPKLGDFSVKKSQS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMK 180
           SS+MFQKV KSEEE VDV++AVSKAVSGLEVA STAVPI+   AVRFRWGL+VPAAEGMK
Sbjct: 121 SSVMFQKVPKSEEEPVDVKTAVSKAVSGLEVAVSTAVPIMKSGAVRFRWGLRVPAAEGMK 180

Query: 181 VSGGISFRAAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDL--GYFSVKRQFDVLQMEN 240
           +SGGISFR  P +++DKIG EHV+ GD  +++GS GN DL+L    FSVKRQF+VL++EN
Sbjct: 181 MSGGISFREVPFMVMDKIGFEHVDGGDMSTKEGSLGNGDLNLDSDCFSVKRQFEVLKLEN 240

Query: 241 GLLKRGIEDLRKQMKLFSNSGDSDRKAARRFKDRKAPEFPGLDG-PPSVEAVAAEE 294
           GLLK+ I+DLRKQMKLFSNSG       RR  DR APE  G DG PP  +A   EE
Sbjct: 241 GLLKKSIDDLRKQMKLFSNSG-------RRLNDRNAPELGGFDGLPPDDKAAGVEE 289

[Close]

BLAST of CmoCh03G000010 vs. NCBI nr
Match: gi|449457293|ref|XP_004146383.1| (PREDICTED: uncharacterized protein LOC101215302 [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 8.9e-111
Identity = 216/296 (72.97%), Postives = 250/296 (84.46%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPLLRAK+PL+ILGLPFQSAIAAGT+K+L+L LST FESGPSF L+YRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTHFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDSSNPFSVIVKTGI SFGSP SSPMLMSAEF+LI  GNP+FMLHFKPK GDF++KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPTSSPMLMSAEFNLIASGNPTFMLHFKPKFGDFTVKKSQS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMK 180
           SS+MFQKVLKSEEESVDV++AVSKAV GL+V+ASTAVPI+   AVR RWGL+VPAAEGMK
Sbjct: 121 SSVMFQKVLKSEEESVDVKTAVSKAVLGLKVSASTAVPIMKSGAVRVRWGLRVPAAEGMK 180

Query: 181 VSGGISFRAAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDL--GYFSVKRQFDVLQMEN 240
           + GGISFR  P ++LDKIG EHV+ GD+ +++GS GN DL+L    FSVKRQF+VL++EN
Sbjct: 181 MGGGISFREVPFMVLDKIGFEHVDGGDTSTKEGSLGNGDLNLDSDCFSVKRQFEVLKLEN 240

Query: 241 GLLKRGIEDLRKQMKLFSNSGDSDRKAARRFKDRKAPEFPGLDG-PPSVEAVAAEE 294
           GLL++ I+DLRK+MKLFSNSG        R+KDRK PE  G DG PP   A   EE
Sbjct: 241 GLLRKSIDDLRKKMKLFSNSGS-------RYKDRKGPELGGFDGLPPDDTAAGVEE 289

[Close]

BLAST of CmoCh03G000010 vs. NCBI nr
Match: gi|567874531|ref|XP_006429855.1| (hypothetical protein CICLE_v10012101mg [Citrus clementina])

HSP 1 Score: 276.9 bits (707), Expect = 4.0e-71
Identity = 167/347 (48.13%), Postives = 228/347 (65.71%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FESGPS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESGPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDTWNPFSLIVKTGTGPFGSPVSSTMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-RSAVSKAVS---------------GLEVAASTA 180
           S +  + +LK+        ++ S++V  S + K ++               G+E+AA+TA
Sbjct: 121 SVLDQKAILKAPNGGVLENDDASIEVVESPMLKKITVLPSRAAGEFAGVLAGVEMAATTA 180

Query: 181 VPILSCAAVRFRWGLKVPAAEGMKVSGGISFRAAPLLLLDKIGIEHVESGDSR------- 240
           +P+ S A V FRWG++VPA    +++ GI+F+  P L+++KIGIEHV+  DS+       
Sbjct: 181 LPVRSRAVVNFRWGVRVPAEITSELTAGINFKKMPYLVMNKIGIEHVDGADSKEKTSKKE 240

Query: 241 --SEKGSFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIEDLRKQM-----KLFS---NSG 300
              E G  G  D+    F++KRQ ++LQ ENGLLK+ +EDLR+++       F+   NSG
Sbjct: 241 AGQELGITGRGDVVEVCFNLKRQMEILQSENGLLKKAVEDLRREILDGKSNPFNGDLNSG 300

[Close]

BLAST of CmoCh03G000010 vs. NCBI nr
Match: gi|802577456|ref|XP_012069007.1| (PREDICTED: uncharacterized protein LOC105631484 [Jatropha curcas])

HSP 1 Score: 272.7 bits (696), Expect = 7.6e-70
Identity = 162/302 (53.64%), Postives = 201/302 (66.56%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPL RAKVPLS+LGLPFQS I AG +K+L+LNL+T FESGPS KL+YRP
Sbjct: 1   MKASLKFREDQKPLFRAKVPLSVLGLPFQSGIVAGESKELTLNLATFFESGPSIKLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG+G FGSP+SS MLMSAEF+L+GRGNPSFMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDTWNPFSLIVKTGMGQFGSPMSSSMLMSAEFNLLGRGNPSFMLHFKPRFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-----------------------------RSAVS 180
           SS MF+K   S         + S++V                               A++
Sbjct: 121 SS-MFEKTGNSVGTLENFDNDGSIEVVDNPTLKGGGVGATNGFSGKRISVLQPNTARAIA 180

Query: 181 KAVSGLEVAASTAVPILSCAAVRFRWGLKVPA--AEGMKVSG--GISFRAAPLLLLDKIG 240
            A SGLEV AST +P+ S A + FRWG++VPA    G       GI+FR  P L+++KIG
Sbjct: 181 GAFSGLEVTASTKLPVKSRAVMNFRWGVRVPAEIKSGFAADSTMGINFRKIPFLVMNKIG 240

Query: 241 IEHVESGDSRSE---------KGSFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIEDLRK 253
           IEHV+ G+S+SE              + D+     +VKRQ DVLQ ENGLLK+ +EDLR+
Sbjct: 241 IEHVD-GESKSEGAVATAKKTSSELTSTDMVEVCLTVKRQLDVLQAENGLLKKAVEDLRR 300

[Close]

BLAST of CmoCh03G000010 vs. NCBI nr
Match: gi|566177292|ref|XP_006381905.1| (hypothetical protein POPTR_0006s20610g [Populus trichocarpa])

HSP 1 Score: 270.4 bits (690), Expect = 3.8e-69
Identity = 168/346 (48.55%), Postives = 212/346 (61.27%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+Q PL RAKVPLSI+GLPFQS I AG +K+LSLNLST FESGPSFK SYRP
Sbjct: 1   MKASLKFREEQNPLFRAKVPLSIIGLPFQSGIIAGESKELSLNLSTFFESGPSFKFSYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRG------NPSFMLHFKPKLGDFS 120
           ND+ NPFS+++KTG G FGSP+SS M+MSAEF+L+G+G      NPSFMLHFKP+ GDFS
Sbjct: 61  NDTWNPFSLVIKTGTGPFGSPVSSSMIMSAEFNLLGKGSNNNNLNPSFMLHFKPQFGDFS 120

Query: 121 IKKSQSSSMMFQK--------VLKSEEESVDV---------------------------- 180
           IKKSQSSS +           V   ++ SV+V                            
Sbjct: 121 IKKSQSSSHVSHVTRSIQNGGVSSDDDGSVEVVEPASPNTTPAVANGMFYGKRIAVLPPV 180

Query: 181 -RSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPA---AEGMKVSGGISFRAAPLLL 240
             SAV+   SGLEVAA T +P+ S A V FRWG++VPA   +   + + GI+FR  P L+
Sbjct: 181 TASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVPAEIKSGSGESTAGINFRKIPFLV 240

Query: 241 LDKIGIEHVESGDSRSEKG--------SFGNEDLDLGYFSVKRQFDVLQMENGLLKRGIE 277
           ++K+GIEHV+ GD RS+K          FGN D+      VKRQ ++LQ ENG LK+ +E
Sbjct: 241 MNKVGIEHVDDGDGRSKKEGTTGKVGMEFGNSDVAEACLGVKRQLEILQSENGHLKKAVE 300

The following BLAST results are available for this feature:

BLAST of CmoCh03G000010 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh03G000010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ92_CUCSA	6.2e-111	72.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507970 PE=4 SV=1	[more]
V4SVP9_9ROSI	2.8e-71	48.13	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012101mg PE=4 SV=1	[more]
A0A067L9N3_JATCU	5.3e-70	53.64	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24793 PE=4 SV=1	[more]
U5GE46_POPTR	2.6e-69	48.55	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=1	[more]
B9HAC7_POPTR	4.5e-69	51.31	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=2	[more]

BLAST of CmoCh03G000010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57990.1	4.4e-52	69.43	unknown protein	[more]

BLAST of CmoCh03G000010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082902\|ref\|XP_008442091.1\|	6.6e-114	75.34	PREDICTED: uncharacterized protein LOC103486052 [Cucumis melo]	[more]
gi\|449457293\|ref\|XP_004146383.1\|	8.9e-111	72.97	PREDICTED: uncharacterized protein LOC101215302 [Cucumis sativus]	[more]
gi\|567874531\|ref\|XP_006429855.1\|	4.0e-71	48.13	hypothetical protein CICLE_v10012101mg [Citrus clementina]	[more]
gi\|802577456\|ref\|XP_012069007.1\|	7.6e-70	53.64	PREDICTED: uncharacterized protein LOC105631484 [Jatropha curcas]	[more]
gi\|566177292\|ref\|XP_006381905.1\|	3.8e-69	48.55	hypothetical protein POPTR_0006s20610g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G000010.1	CmoCh03G000010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34285	FAMILY NOT NAMED	coord: 2..249 score: 1.9E
None	No IPR available	PANTHER	PTHR34285:SF3	SUBFAMILY NOT NAMED	coord: 2..249 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G000010	CmaCh03G000180	Cucurbita maxima (Rimu)	cmacmoB658
CmoCh03G000010	Cla011682	Watermelon (97103) v1	cmowmB629
CmoCh03G000010	ClCG04G002270	Watermelon (Charleston Gray)	cmowcgB586
CmoCh03G000010	Lsi01G020700	Bottle gourd (USVL1VR-Ls)	cmolsiB589
CmoCh03G000010	Cp4.1LG10g12190	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G000010	MELO3C008898.2	Melon (DHL92) v3.6.1	cmomedB701
CmoCh03G000010	CsaV3_4G030390	Cucumber (Chinese Long) v3	cmocucB0784
CmoCh03G000010	Cla97C04G069830	Watermelon (97103) v2	cmowmbB660
CmoCh03G000010	Carg26094	Silver-seed gourd	carcmoB0702

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None