Cp4.1LG10g12190 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g12190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Mucin-19
Location	Cp4.1LG10 : 9344151 .. 9345047 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCATCTCTGAAATTCCGCGAAGATCAGAAGCCATTATTGAGAGCCAAAGTTCCTCTCAGCATTCTTGGCCTCCCTTTCCAATCCGCCATAGCCGCCGGCACCGCCAAAGACCTCTCTCTCAACCTCTCAACCCTCTTCGAATCCGGCCCCTCCTTCAAACTCTCTTATCGCCCTAACGATTCTTCAAATCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCTCCTTCGGTTCCCCGATCTCTTCGCCTATGCTCATGAGCGCCGAATTCGACCTAATCGGCCGTGGAAATCCCTCCTTCATGCTCCATTTCAAGCCGAAACTCGGCGATTTCTCGATCAAGAAATCGCAGTCCTCCTCGATGATGTTCCAGAAGGTTCTGAAATCGGAGGAGGAATCTGTGGATGTTAGAAGTGCTGTTTCGAAGGCGGTTTCTGGTTTGGAAGTGGCTGCTAGTACGGCGGTTCCGATTCTGAGTTGTGCGGCGGTGAGGTTCCGATGGGGACTTAAGGTCCCAGCGGCGGAGGGGATGAAGGTGAGTGGTGGAATTTCATTTCGGGAGGCTCCATTGCTGTTGCTGGATAAGATCGGGATCGAACACGTGGAGAGTGGGGATTCGAGATCGGAGAAGGGTAGTTTCGGAAATGAGGATTTGGATTTGGGTTATTTTTCAGTGAAGCGTCAGTTTGAGGTTTTGCAAATGGAGAATGGGCTTTTGAAAAAGGGCATTGAGGATTTGAGGAAGCAAATGAAATTGTTTTCCAATTCCAGCGACTCCGACCGGAAGGCGGCCCGGCGGTTTAAGGACAGAAAGGCGCCGGAGTTCCCCGGTCTTGATGGGCCACCGTTGGTGGAGGCGGTGGCCGAGGAAGGCAGCAGCGTTAGTGCTTGA

mRNA sequence

ATGAAAGCATCTCTGAAATTCCGCGAAGATCAGAAGCCATTATTGAGAGCCAAAGTTCCTCTCAGCATTCTTGGCCTCCCTTTCCAATCCGCCATAGCCGCCGGCACCGCCAAAGACCTCTCTCTCAACCTCTCAACCCTCTTCGAATCCGGCCCCTCCTTCAAACTCTCTTATCGCCCTAACGATTCTTCAAATCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCTCCTTCGGTTCCCCGATCTCTTCGCCTATGCTCATGAGCGCCGAATTCGACCTAATCGGCCGTGGAAATCCCTCCTTCATGCTCCATTTCAAGCCGAAACTCGGCGATTTCTCGATCAAGAAATCGCAGTCCTCCTCGATGATGTTCCAGAAGGTTCTGAAATCGGAGGAGGAATCTGTGGATGTTAGAAGTGCTGTTTCGAAGGCGGTTTCTGGTTTGGAAGTGGCTGCTAGTACGGCGGTTCCGATTCTGAGTTGTGCGGCGGTGAGGTTCCGATGGGGACTTAAGGTCCCAGCGGCGGAGGGGATGAAGGTGAGTGGTGGAATTTCATTTCGGGAGGCTCCATTGCTGTTGCTGGATAAGATCGGGATCGAACACGTGGAGAGTGGGGATTCGAGATCGGAGAAGGGTAGTTTCGGAAATGAGGATTTGGATTTGGGTTATTTTTCAGTGAAGCGTCAGTTTGAGGTTTTGCAAATGGAGAATGGGCTTTTGAAAAAGGGCATTGAGGATTTGAGGAAGCAAATGAAATTGTTTTCCAATTCCAGCGACTCCGACCGGAAGGCGGCCCGGCGGTTTAAGGACAGAAAGGCGCCGGAGTTCCCCGGTCTTGATGGGCCACCGTTGGTGGAGGCGGTGGCCGAGGAAGGCAGCAGCGTTAGTGCTTGA

Coding sequence (CDS)

ATGAAAGCATCTCTGAAATTCCGCGAAGATCAGAAGCCATTATTGAGAGCCAAAGTTCCTCTCAGCATTCTTGGCCTCCCTTTCCAATCCGCCATAGCCGCCGGCACCGCCAAAGACCTCTCTCTCAACCTCTCAACCCTCTTCGAATCCGGCCCCTCCTTCAAACTCTCTTATCGCCCTAACGATTCTTCAAATCCCTTCTCAGTAATCGTCAAAACTGGAATCGGCTCCTTCGGTTCCCCGATCTCTTCGCCTATGCTCATGAGCGCCGAATTCGACCTAATCGGCCGTGGAAATCCCTCCTTCATGCTCCATTTCAAGCCGAAACTCGGCGATTTCTCGATCAAGAAATCGCAGTCCTCCTCGATGATGTTCCAGAAGGTTCTGAAATCGGAGGAGGAATCTGTGGATGTTAGAAGTGCTGTTTCGAAGGCGGTTTCTGGTTTGGAAGTGGCTGCTAGTACGGCGGTTCCGATTCTGAGTTGTGCGGCGGTGAGGTTCCGATGGGGACTTAAGGTCCCAGCGGCGGAGGGGATGAAGGTGAGTGGTGGAATTTCATTTCGGGAGGCTCCATTGCTGTTGCTGGATAAGATCGGGATCGAACACGTGGAGAGTGGGGATTCGAGATCGGAGAAGGGTAGTTTCGGAAATGAGGATTTGGATTTGGGTTATTTTTCAGTGAAGCGTCAGTTTGAGGTTTTGCAAATGGAGAATGGGCTTTTGAAAAAGGGCATTGAGGATTTGAGGAAGCAAATGAAATTGTTTTCCAATTCCAGCGACTCCGACCGGAAGGCGGCCCGGCGGTTTAAGGACAGAAAGGCGCCGGAGTTCCCCGGTCTTGATGGGCCACCGTTGGTGGAGGCGGTGGCCGAGGAAGGCAGCAGCGTTAGTGCTTGA

Protein sequence

MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRPNDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQSSSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMKVSGGISFREAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRKQMKLFSNSSDSDRKAARRFKDRKAPEFPGLDGPPLVEAVAEEGSSVSA

Homology

[Close]

BLAST of Cp4.1LG10g12190 vs. TrEMBL
Match: A0A0A0KZ92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507970 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 8.0e-111
Identity = 214/286 (74.83%), Postives = 246/286 (86.01%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPLLRAK+PL+ILGLPFQSAIAAGT+K+L+L LST FESGPSF L+YRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTHFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDSSNPFSVIVKTGI SFGSP SSPMLMSAEF+LI  GNP+FMLHFKPK GDF++KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPTSSPMLMSAEFNLIASGNPTFMLHFKPKFGDFTVKKSQS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMK 180
           SS+MFQKVLKSEEESVDV++AVSKAV GL+V+ASTAVPI+   AVR RWGL+VPAAEGMK
Sbjct: 121 SSVMFQKVLKSEEESVDVKTAVSKAVLGLKVSASTAVPIMKSGAVRVRWGLRVPAAEGMK 180

Query: 181 VSGGISFREAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDL--GYFSVKRQFEVLQMEN 240
           + GGISFRE P ++LDKIG EHV+ GD+ +++GS GN DL+L    FSVKRQFEVL++EN
Sbjct: 181 MGGGISFREVPFMVLDKIGFEHVDGGDTSTKEGSLGNGDLNLDSDCFSVKRQFEVLKLEN 240

Query: 241 GLLKKGIEDLRKQMKLFSNSSDSDRKAARRFKDRKAPEFPGLDGPP 285
           GLL+K I+DLRK+MKLFSNS         R+KDRK PE  G DG P
Sbjct: 241 GLLRKSIDDLRKKMKLFSNSGS-------RYKDRKGPELGGFDGLP 279

[Close]

BLAST of Cp4.1LG10g12190 vs. TrEMBL
Match: V4SVP9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012101mg PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.1e-72
Identity = 157/286 (54.90%), Postives = 208/286 (72.73%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FESGPS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESGPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQ 
Sbjct: 61  NDTWNPFSLIVKTGTGPFGSPVSSTMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQ- 120

Query: 121 SSMMFQK---------VLKSEEESVDV--------------RSA--VSKAVSGLEVAAST 180
           SS++ QK         VL++++ S++V              R+A   +  ++G+E+AA+T
Sbjct: 121 SSVLDQKAILKAPNGGVLENDDASIEVVESPMLKKITVLPSRAAGEFAGVLAGVEMAATT 180

Query: 181 AVPILSCAAVRFRWGLKVPAAEGMKVSGGISFREAPLLLLDKIGIEHVESGDSR------ 240
           A+P+ S A V FRWG++VPA    +++ GI+F++ P L+++KIGIEHV+  DS+      
Sbjct: 181 ALPVRSRAVVNFRWGVRVPAEITSELTAGINFKKMPYLVMNKIGIEHVDGADSKEKTSKK 240

Query: 241 ---SEKGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRKQM 253
               E G  G  D+    F++KRQ E+LQ ENGLLKK +EDLR+++
Sbjct: 241 EAGQELGITGRGDVVEVCFNLKRQMEILQSENGLLKKAVEDLRREI 285

[Close]

BLAST of Cp4.1LG10g12190 vs. TrEMBL
Match: A0A067E8E4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043464mg PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 3.1e-70
Identity = 150/285 (52.63%), Postives = 202/285 (70.88%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FES PS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESWPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDAWNPFSLIVKTGTGPFGSPVSSSMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-RSAVSKAVS---------------GLEVAASTA 180
           S +  + +LK+        ++ S++V  S + K ++               G+++ A+TA
Sbjct: 121 SVLDQKAILKAPNGGVLENDDTSIEVVESPMLKKITVLPSRAAGEFAGVLAGVDMVATTA 180

Query: 181 VPILSCAAVRFRWGLKVPAAEGMKVSGGISFREAPLLLLDKIGIEHVESGDSR------- 240
           +P+ S A V FRWG++VPA    + + GI+F++ P L+++KIG+EHV+  DS+       
Sbjct: 181 LPVRSRAVVNFRWGVRVPAEITSESTAGINFKKMPYLVMNKIGVEHVDGADSKEKTSKKE 240

Query: 241 --SEKGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRKQM 253
              + G  G  D+    F++KRQ E+LQ ENGLLKK +EDLR+++
Sbjct: 241 AGQQLGITGKADVVEVCFNLKRQMEILQSENGLLKKAVEDLRREI 285

[Close]

BLAST of Cp4.1LG10g12190 vs. TrEMBL
Match: B9HAC7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=2)

HSP 1 Score: 273.1 bits (697), Expect = 4.0e-70
Identity = 163/318 (51.26%), Postives = 204/318 (64.15%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+Q PL RAKVPLSI+GLPFQS I AG +K+LSLNLST FESGPSFK SYRP
Sbjct: 1   MKASLKFREEQNPLFRAKVPLSIIGLPFQSGIIAGESKELSLNLSTFFESGPSFKFSYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRG------NPSFMLHFKPKLGDFS 120
           ND+ NPFS+++KTG G FGSP+SS M+MSAEF+L+G+G      NPSFMLHFKP+ GDFS
Sbjct: 61  NDTWNPFSLVIKTGTGPFGSPVSSSMIMSAEFNLLGKGSNNNNLNPSFMLHFKPQFGDFS 120

Query: 121 IKKSQSSSMMFQK--------VLKSEEESVDV---------------------------- 180
           IKKSQSSS +           V   ++ SV+V                            
Sbjct: 121 IKKSQSSSHVSHVTRSIQNGGVSSDDDGSVEVVEPASPNTTPAVANGMFYGKRIAVLPPV 180

Query: 181 -RSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPA---AEGMKVSGGISFREAPLLL 240
             SAV+   SGLEVAA T +P+ S A V FRWG++VPA   +   + + GI+FR+ P L+
Sbjct: 181 TASAVAGVFSGLEVAARTKLPVRSRAVVNFRWGVRVPAEIKSGSGESTAGINFRKIPFLV 240

Query: 241 LDKIGIEHVESGDSRSEKG--------SFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIE 262
           ++K+GIEHV+ GD RS+K          FGN D+      VKRQ E+LQ ENG LKK +E
Sbjct: 241 MNKVGIEHVDDGDGRSKKEGTTGKVGMEFGNSDVAEACLGVKRQLEILQSENGHLKKAVE 300

[Close]

BLAST of Cp4.1LG10g12190 vs. TrEMBL
Match: A0A067L9N3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24793 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69
Identity = 168/344 (48.84%), Postives = 214/344 (62.21%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPL RAKVPLS+LGLPFQS I AG +K+L+LNL+T FESGPS KL+YRP
Sbjct: 1   MKASLKFREDQKPLFRAKVPLSVLGLPFQSGIVAGESKELTLNLATFFESGPSIKLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG+G FGSP+SS MLMSAEF+L+GRGNPSFMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDTWNPFSLIVKTGMGQFGSPMSSSMLMSAEFNLLGRGNPSFMLHFKPRFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-----------------------------RSAVS 180
           SS MF+K   S         + S++V                               A++
Sbjct: 121 SS-MFEKTGNSVGTLENFDNDGSIEVVDNPTLKGGGVGATNGFSGKRISVLQPNTARAIA 180

Query: 181 KAVSGLEVAASTAVPILSCAAVRFRWGLKVPA--AEGMKVSG--GISFREAPLLLLDKIG 240
            A SGLEV AST +P+ S A + FRWG++VPA    G       GI+FR+ P L+++KIG
Sbjct: 181 GAFSGLEVTASTKLPVKSRAVMNFRWGVRVPAEIKSGFAADSTMGINFRKIPFLVMNKIG 240

Query: 241 IEHVESGDSRSE---------KGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRK 277
           IEHV+ G+S+SE              + D+     +VKRQ +VLQ ENGLLKK +EDLR+
Sbjct: 241 IEHVD-GESKSEGAVATAKKTSSELTSTDMVEVCLTVKRQLDVLQAENGLLKKAVEDLRR 300

[Close]

BLAST of Cp4.1LG10g12190 vs. TAIR10
Match: AT3G57990.1 (AT3G57990.1 unknown protein)

HSP 1 Score: 232.6 bits (592), Expect = 3.1e-61
Identity = 145/292 (49.66%), Postives = 179/292 (61.30%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKAS+KFRE+QKPL RAKVPLSILGLPFQS I AG +K+LSLNLST FESGPS K++YRP
Sbjct: 1   MKASMKFREEQKPLFRAKVPLSILGLPFQSGIVAGESKELSLNLSTFFESGPSLKVAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDS NPFS+IVKTG GSFGSPISS MLMSAEF+L+G+GNPSFMLHFKP+ GDFSIKKS S
Sbjct: 61  NDSWNPFSLIVKTGSGSFGSPISSSMLMSAEFNLLGQGNPSFMLHFKPQFGDFSIKKSHS 120

Query: 121 SSMMFQKVLKS-----EEESVDVRSAVSKAVSGL-----------EVAASTAVPILSCAA 180
           SS   + ++KS      E+   +    + AV+G              +A     +LS   
Sbjct: 121 SSGFERNLIKSMNGSVSEDDSSIEVVDTPAVNGCGGGFRKVTVLPSTSAGDIAGLLSGVE 180

Query: 181 V--------------RFRWGLKVPA--AEGMKVSGGISFREAPLLLLDKIGIEHVESGDS 240
           V               FRWG++VP         +  IS R  P L+++KIGIEHV+  D+
Sbjct: 181 VAARTSLPVRGRAVLNFRWGVRVPTEIRRDFDPTAAISLRRFPFLVMNKIGIEHVDGADA 240

Query: 241 RSEKGSFGNEDLDLGYFSVKRQF----------EVLQMENGLLKKGIEDLRK 251
           +  K +      D G  S   QF          E L+ EN  LK+ +EDLR+
Sbjct: 241 KVTKSTG-----DPGKVSGPAQFTTSGDVAEVIEELRTENKQLKRAVEDLRE 287

[Close]

BLAST of Cp4.1LG10g12190 vs. NCBI nr
Match: gi|659082902|ref|XP_008442091.1| (PREDICTED: uncharacterized protein LOC103486052 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 221/286 (77.27%), Postives = 247/286 (86.36%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPLLRAK+PL+ILGLPFQSAIAAGT+K+L+L LSTLFESGPSF L+YRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTLFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDSSNPFSVIVKTGI SFGSPISSPMLMSAEF+LI  GNP+FMLHFKPKLGDFS+KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPISSPMLMSAEFNLIASGNPTFMLHFKPKLGDFSVKKSQS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMK 180
           SS+MFQKV KSEEE VDV++AVSKAVSGLEVA STAVPI+   AVRFRWGL+VPAAEGMK
Sbjct: 121 SSVMFQKVPKSEEEPVDVKTAVSKAVSGLEVAVSTAVPIMKSGAVRFRWGLRVPAAEGMK 180

Query: 181 VSGGISFREAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDL--GYFSVKRQFEVLQMEN 240
           +SGGISFRE P +++DKIG EHV+ GD  +++GS GN DL+L    FSVKRQFEVL++EN
Sbjct: 181 MSGGISFREVPFMVMDKIGFEHVDGGDMSTKEGSLGNGDLNLDSDCFSVKRQFEVLKLEN 240

Query: 241 GLLKKGIEDLRKQMKLFSNSSDSDRKAARRFKDRKAPEFPGLDGPP 285
           GLLKK I+DLRKQMKLFSNS        RR  DR APE  G DG P
Sbjct: 241 GLLKKSIDDLRKQMKLFSNS-------GRRLNDRNAPELGGFDGLP 279

[Close]

BLAST of Cp4.1LG10g12190 vs. NCBI nr
Match: gi|449457293|ref|XP_004146383.1| (PREDICTED: uncharacterized protein LOC101215302 [Cucumis sativus])

HSP 1 Score: 408.3 bits (1048), Expect = 1.2e-110
Identity = 214/286 (74.83%), Postives = 246/286 (86.01%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFREDQKPLLRAK+PL+ILGLPFQSAIAAGT+K+L+L LST FESGPSF L+YRP
Sbjct: 1   MKASLKFREDQKPLLRAKIPLTILGLPFQSAIAAGTSKELTLKLSTHFESGPSFNLAYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           NDSSNPFSVIVKTGI SFGSP SSPMLMSAEF+LI  GNP+FMLHFKPK GDF++KKSQS
Sbjct: 61  NDSSNPFSVIVKTGIASFGSPTSSPMLMSAEFNLIASGNPTFMLHFKPKFGDFTVKKSQS 120

Query: 121 SSMMFQKVLKSEEESVDVRSAVSKAVSGLEVAASTAVPILSCAAVRFRWGLKVPAAEGMK 180
           SS+MFQKVLKSEEESVDV++AVSKAV GL+V+ASTAVPI+   AVR RWGL+VPAAEGMK
Sbjct: 121 SSVMFQKVLKSEEESVDVKTAVSKAVLGLKVSASTAVPIMKSGAVRVRWGLRVPAAEGMK 180

Query: 181 VSGGISFREAPLLLLDKIGIEHVESGDSRSEKGSFGNEDLDL--GYFSVKRQFEVLQMEN 240
           + GGISFRE P ++LDKIG EHV+ GD+ +++GS GN DL+L    FSVKRQFEVL++EN
Sbjct: 181 MGGGISFREVPFMVLDKIGFEHVDGGDTSTKEGSLGNGDLNLDSDCFSVKRQFEVLKLEN 240

Query: 241 GLLKKGIEDLRKQMKLFSNSSDSDRKAARRFKDRKAPEFPGLDGPP 285
           GLL+K I+DLRK+MKLFSNS         R+KDRK PE  G DG P
Sbjct: 241 GLLRKSIDDLRKKMKLFSNSGS-------RYKDRKGPELGGFDGLP 279

[Close]

BLAST of Cp4.1LG10g12190 vs. NCBI nr
Match: gi|567874531|ref|XP_006429855.1| (hypothetical protein CICLE_v10012101mg [Citrus clementina])

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-72
Identity = 157/286 (54.90%), Postives = 208/286 (72.73%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FESGPS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESGPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQ 
Sbjct: 61  NDTWNPFSLIVKTGTGPFGSPVSSTMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQ- 120

Query: 121 SSMMFQK---------VLKSEEESVDV--------------RSA--VSKAVSGLEVAAST 180
           SS++ QK         VL++++ S++V              R+A   +  ++G+E+AA+T
Sbjct: 121 SSVLDQKAILKAPNGGVLENDDASIEVVESPMLKKITVLPSRAAGEFAGVLAGVEMAATT 180

Query: 181 AVPILSCAAVRFRWGLKVPAAEGMKVSGGISFREAPLLLLDKIGIEHVESGDSR------ 240
           A+P+ S A V FRWG++VPA    +++ GI+F++ P L+++KIGIEHV+  DS+      
Sbjct: 181 ALPVRSRAVVNFRWGVRVPAEITSELTAGINFKKMPYLVMNKIGIEHVDGADSKEKTSKK 240

Query: 241 ---SEKGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRKQM 253
               E G  G  D+    F++KRQ E+LQ ENGLLKK +EDLR+++
Sbjct: 241 EAGQELGITGRGDVVEVCFNLKRQMEILQSENGLLKKAVEDLRREI 285

[Close]

BLAST of Cp4.1LG10g12190 vs. NCBI nr
Match: gi|641831066|gb|KDO50135.1| (hypothetical protein CISIN_1g043464mg [Citrus sinensis])

HSP 1 Score: 273.5 bits (698), Expect = 4.4e-70
Identity = 150/285 (52.63%), Postives = 202/285 (70.88%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FES PS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESWPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDAWNPFSLIVKTGTGPFGSPVSSSMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-RSAVSKAVS---------------GLEVAASTA 180
           S +  + +LK+        ++ S++V  S + K ++               G+++ A+TA
Sbjct: 121 SVLDQKAILKAPNGGVLENDDTSIEVVESPMLKKITVLPSRAAGEFAGVLAGVDMVATTA 180

Query: 181 VPILSCAAVRFRWGLKVPAAEGMKVSGGISFREAPLLLLDKIGIEHVESGDSR------- 240
           +P+ S A V FRWG++VPA    + + GI+F++ P L+++KIG+EHV+  DS+       
Sbjct: 181 LPVRSRAVVNFRWGVRVPAEITSESTAGINFKKMPYLVMNKIGVEHVDGADSKEKTSKKE 240

Query: 241 --SEKGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRKQM 253
              + G  G  D+    F++KRQ E+LQ ENGLLKK +EDLR+++
Sbjct: 241 AGQQLGITGKADVVEVCFNLKRQMEILQSENGLLKKAVEDLRREI 285

[Close]

BLAST of Cp4.1LG10g12190 vs. NCBI nr
Match: gi|568879885|ref|XP_006492876.1| (PREDICTED: uncharacterized protein LOC102630624 [Citrus sinensis])

HSP 1 Score: 273.5 bits (698), Expect = 4.4e-70
Identity = 150/285 (52.63%), Postives = 202/285 (70.88%), Query Frame = 1


Query: 1   MKASLKFREDQKPLLRAKVPLSILGLPFQSAIAAGTAKDLSLNLSTLFESGPSFKLSYRP 60
           MKASLKFRE+QKPL RAKVPLSILGLPF+S I AG +++LSLNLST FES PS K+ YRP
Sbjct: 1   MKASLKFREEQKPLFRAKVPLSILGLPFRSGIVAGESRELSLNLSTFFESWPSIKIGYRP 60

Query: 61  NDSSNPFSVIVKTGIGSFGSPISSPMLMSAEFDLIGRGNPSFMLHFKPKLGDFSIKKSQS 120
           ND+ NPFS+IVKTG G FGSP+SS MLMSAEF+L+GRGNP+FMLHFKP+ GDFSIKKSQS
Sbjct: 61  NDAWNPFSLIVKTGTGPFGSPVSSSMLMSAEFNLLGRGNPAFMLHFKPQFGDFSIKKSQS 120

Query: 121 SSMMFQKVLKS--------EEESVDV-RSAVSKAVS---------------GLEVAASTA 180
           S +  + +LK+        ++ S++V  S + K ++               G+++ A+TA
Sbjct: 121 SVLDQKAILKAPNGGVLENDDTSIEVVESPMLKKITVLPSRAAGEFAGVLAGVDMVATTA 180

Query: 181 VPILSCAAVRFRWGLKVPAAEGMKVSGGISFREAPLLLLDKIGIEHVESGDSR------- 240
           +P+ S A V FRWG++VPA    + + GI+F++ P L+++KIG+EHV+  DS+       
Sbjct: 181 LPVRSRAVVNFRWGVRVPAEITSESTAGINFKKMPYLVMNKIGVEHVDGADSKEKTSKKE 240

Query: 241 --SEKGSFGNEDLDLGYFSVKRQFEVLQMENGLLKKGIEDLRKQM 253
              + G  G  D+    F++KRQ E+LQ ENGLLKK +EDLR+++
Sbjct: 241 AGQQLGITGKADVVEVCFNLKRQMEILQSENGLLKKAVEDLRREI 285

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g12190 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG10g12190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ92_CUCSA	8.0e-111	74.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G507970 PE=4 SV=1	[more]
V4SVP9_9ROSI	1.1e-72	54.90	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012101mg PE=4 SV=1	[more]
A0A067E8E4_CITSI	3.1e-70	52.63	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043464mg PE=4 SV=1	[more]
B9HAC7_POPTR	4.0e-70	51.26	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s20610g PE=4 SV=2	[more]
A0A067L9N3_JATCU	1.2e-69	48.84	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24793 PE=4 SV=1	[more]

BLAST of Cp4.1LG10g12190 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57990.1	3.1e-61	49.66	unknown protein	[more]

BLAST of Cp4.1LG10g12190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082902\|ref\|XP_008442091.1\|	1.1e-113	77.27	PREDICTED: uncharacterized protein LOC103486052 [Cucumis melo]	[more]
gi\|449457293\|ref\|XP_004146383.1\|	1.2e-110	74.83	PREDICTED: uncharacterized protein LOC101215302 [Cucumis sativus]	[more]
gi\|567874531\|ref\|XP_006429855.1\|	1.6e-72	54.90	hypothetical protein CICLE_v10012101mg [Citrus clementina]	[more]
gi\|641831066\|gb\|KDO50135.1\|	4.4e-70	52.63	hypothetical protein CISIN_1g043464mg [Citrus sinensis]	[more]
gi\|568879885\|ref\|XP_006492876.1\|	4.4e-70	52.63	PREDICTED: uncharacterized protein LOC102630624 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g12190.1	Cp4.1LG10g12190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34285	FAMILY NOT NAMED	coord: 2..273 score: 3.0E
None	No IPR available	PANTHER	PTHR34285:SF3	SUBFAMILY NOT NAMED	coord: 2..273 score: 3.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g12190	CmaCh03G000180	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g12190	CmoCh03G000010	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g12190	Cla011682	Watermelon (97103) v1	cpewmB083
Cp4.1LG10g12190	ClCG04G002270	Watermelon (Charleston Gray)	cpewcgB077
Cp4.1LG10g12190	CSPI04G20180	Wild cucumber (PI 183967)	cpecpiB075
Cp4.1LG10g12190	Lsi01G020700	Bottle gourd (USVL1VR-Ls)	cpelsiB050
Cp4.1LG10g12190	Bhi03G002324	Wax gourd	cpewgoB0090
Cp4.1LG10g12190	Carg26094	Silver-seed gourd	carcpeB0729

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g12190	Cucurbita pepo (Zucchini)	cpecpeB082
Cp4.1LG10g12190	Cucurbita maxima (Rimu)	cmacpeB418
Cp4.1LG10g12190	Cucurbita maxima (Rimu)	cmacpeB654
Cp4.1LG10g12190	Cucurbita moschata (Rifu)	cmocpeB604
Cp4.1LG10g12190	Wild cucumber (PI 183967)	cpecpiB067
Cp4.1LG10g12190	Cucumber (Chinese Long) v2	cpecuB073
Cp4.1LG10g12190	Cucumber (Chinese Long) v2	cpecuB082
Cp4.1LG10g12190	Watermelon (Charleston Gray)	cpewcgB080
Cp4.1LG10g12190	Watermelon (97103) v1	cpewmB089
Cp4.1LG10g12190	Melon (DHL92) v3.5.1	cpemeB074
Cp4.1LG10g12190	Cucumber (Gy14) v2	cgybcpeB465
Cp4.1LG10g12190	Melon (DHL92) v3.6.1	cpemedB096
Cp4.1LG10g12190	Silver-seed gourd	carcpeB0665
Cp4.1LG10g12190	Cucumber (Chinese Long) v3	cpecucB0077