Lsi01G011790 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G011790
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAlpha-ketoglutarate-dependent dioxygenase AlkB-like
Locationchr01 : 10024643 .. 10027735 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGTGTTGCGAAGGTGAAGGTCTGAACTGAAATCTCACTTTCTTTCGTCTTTTCCTCTATCTATAGATTTCTCTATGATTCTGCTTCTCCTCAAATGTATCTCTGAGTATTCCTGCTGTTGTCAGATAGGGTTTTCATCTTAGATTCATCATTGGAAGAGACGGACTGGAAGAGTTCATCCAGCTCCCACCATTTCCCCCTGCTTTTCCCTTTGCACAATATTCATTCTCCATCTATCTCTTATTAGGGTTCTAAATCCTTCTGCAAATTGAGATTTTGAATCAGAGCCATGGAATCGGCGGAAGGGCTTAATCATTTCAAAGTTGGGCATCTTCCAACAGTGTTCTATATTCCCAACTTCATAACACACGACGATGAGACCATGCTTCTGGATAATGTACCAAATTTTCTCTATTGCTTTTTCATTCTTTGCACTTTTTTTTATTGTCTTGTAATCGTTTGCTAAACTGGGTAAGTTTTCATTTGTAGATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAATAGGAGGCTGCAAAATTGGGGTATGTAGAAATTAGAATAGCAATCTTATATATTTTTGCTACTTTTTGAAGCTCTGAATTCTTGAAAGGTTTGTAAGAGGGTGAAAAGCAACGTGAGATTATCCTCTTTGTCTTACTAATTATACTACTTTCTTTATCCATTGATTTCTTTCAGGGGGCATTGTACATGAAAAAGGTCTTCTACCCCAAGAATGTAAGTTTGATAAAAATGTGCTTAAACTTGAAATGTTCTTAGTTAATTTTATCTGATGTATAGTATACTGTCCTCTGGTAATAATTGCAATCAAATTTAAGCTTAATGCATTGAGATACACATCTTATTGACTTGATTACGAAATTCTAGCGTGCTTTATTCATAATAGTCTGGCTATATTCAAGCTAATAGTTCATTTTGTTCCTTTTGGACCGTGTGTGACTTTTCCTCGAAACTAACGAATGGGAGAATTTTGATTAATGAGAAATTAACTTCAAATGGGAAGTATAAGACAGCATTTGGTGAACGCACTGTGGATGTTTGGAATGTTGCAAATTTCATTGTTGTCTCCAGATTTTACTTTTGTTTTTCTTTATCACAATGGGGAATTAATACTTTTGGATAGACTAGTTTAATTCAATCACCTCATGGGAATGACAGAAAACAGCTGAAAAACTTTATACTGCTATCAAGCTTGGAGTTTGATATTAGTGTGGTTTTATGACCTTGAACAGGATAAGTCCTAGGCTGTACAACGGTGTCCTTTAGTTCTAAAGTTTTAGTATTAGCATGGTTTTCTTACCCATCCACATTGGCTAGCTCCTATTTTGATGCCCCTTAGCTCCAATTTTGATGCTCCTTATTCAAAAGCTTGGATATTTTACTTCAATGATTACTTAAGTAGGGTATACAAGCATCCATATCATTTAACATTGTACACCACTTGATCCCTGAGCAGGTTGCCAAAATTTGTTTCCATCAATCCCCTTATCTCATAATTTTCTTTCTGTTTTCTGCTGTGCCTAATTCTCCTCTATGGTTGGCACTCATCTTAGTCAGCTTTACATATATGTTTCTTTACCTCAGAGAGTATAATACGGGAGAATGGAAATTTGCCTCTCTGGATGTTAGGTGAAAAAGTTGAACAAGTTCAATCAGTTTAATTGACAAATCTGTCTTTTGTTGATCTGCAGTGCCTATTTGGCTGACAAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCTTCATAATCAAGGCATAATGGTATGGACTAACGTTTCCTTGTCCTTAGAGCATATCTTTGTTTGTATTATAATTATATTCATCGCCATGATCCCCATCATAGATCTAATCTAGATGTACATTGGCATCCAACCTCTGACTGAAAAAAATATCCGTTCTACATCAGTGTTGTATATTATCATCATACATTGGCATCCAACCAATTAGCAACATCTTAGAAACCGTTTTTGGTTCTCGTTTCGTGTAGCCGCACCAAGATGGCCCTGCTTACTTTCCTGTAGTAGCAATTCTATCTCTTGGTTCTCCTGTTGTTATGGACTTCACTCCCCATTCAAGGTTGAAATCATGTGCAGACCAGTTGACAGAAAACCTCGACGACAAAGATTCTAACGGAACGACTCACTGCCCTTTCTCTATTCTTCTAATGCCTCGTAGTTTGCTCATATTTAAAGATGAAGCTTATTCTGGTAAATAAAGCCCTTGATTTTGTCGTAACCTTCTCAGTTTAGTGAAGTTTGTCAAACTGTTTTTTTGTTGCCTTAATTTATTTGTCAGGTTATTTGCATGGTATCAGTGACAACAATCTTCAATGTTATGAACAGGTATGATACCAACTAATTGGTTCTTAATATTCATTCCAGCATTGCAGTTTGTTTCTCATTTCTTTGCTCTATCAGGCAGTGAACAAAACTGAAGTTCAAAACTGGCTGTTAGAAACAGAAAATAAGACCGTCAAAGTGAACAGCGATCATAGTTCTTTCGAGAGAACCAATACTCGAGTTTCATTGACATGTCGACTAGTACCAAAGGTTCACAAGCATTTGTTTAGGCATTGAACATTCCTTGAAGAATTTTTGGTTTGTACAGTATTAGAAGTTTTAAATAGTCTATCTGTCTTATCATATGAGCATTAAGCATTGGTTTATGATTTTGCATTGGTAAAAAGACGTAGAAGCAAGATATTTGAAATTTGTCAAGTCAGTTTGGGTTGTGGATAGGGCACACTTGCACGAATTCAGGTAACGGTCTCGGTTACGAGACGGAAAGAGAAAGAAAACTGTACCCGATAAGGGATGGGTATGCTTTTTAAAAGTTTGATAGTATAAATTCTGAGAATATTTCCATGCTGGTAGTAAACGCAATGAGCTCATGAGATTTTTTCATAGAATCTCTTGTAATTACGACTACTGTGCCACTTAGGTTTATAGTTCTCAAAACTCATTTTTGGTGGACTTTGTTCCAACCTTAATTTTCGATCTATCGAAGTTATTTATCTTACTCTA

mRNA sequence

GTGGTGTTGCGAAGGTGAAGGTCTGAACTGAAATCTCACTTTCTTTCGTCTTTTCCTCTATCTATAGATTTCTCTATGATTCTGCTTCTCCTCAAATGTATCTCTGAGTATTCCTGCTGTTGTCAGATAGGGTTTTCATCTTAGATTCATCATTGGAAGAGACGGACTGGAAGAGTTCATCCAGCTCCCACCATTTCCCCCTGCTTTTCCCTTTGCACAATATTCATTCTCCATCTATCTCTTATTAGGGTTCTAAATCCTTCTGCAAATTGAGATTTTGAATCAGAGCCATGGAATCGGCGGAAGGGCTTAATCATTTCAAAGTTGGGCATCTTCCAACAGTGTTCTATATTCCCAACTTCATAACACACGACGATGAGACCATGCTTCTGGATAATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAATAGGAGGCTGCAAAATTGGGGGGGCATTGTACATGAAAAAGGTCTTCTACCCCAAGAATTGCCTATTTGGCTGACAAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCTTCATAATCAAGGCATAATGGTATGGACTAACCCGCACCAAGATGGCCCTGCTTACTTTCCTGTAGTAGCAATTCTATCTCTTGGTTCTCCTGTTGTTATGGACTTCACTCCCCATTCAAGGTTGAAATCATGTGCAGACCAGTTGACAGAAAACCTCGACGACAAAGATTCTAACGGAACGACTCACTGCCCTTTCTCTATTCTTCTAATGCCTCGTAGTTTGCTCATATTTAAAGATGAAGCTTATTCTGGTTATTTGCATGGTATCAGTGACAACAATCTTCAATGTTATGAACAGGCAGTGAACAAAACTGAAGTTCAAAACTGGCTGTTAGAAACAGAAAATAAGACCGTCAAAGTGAACAGCGATCATAGTTCTTTCGAGAGAACCAATACTCGAGTTTCATTGACATGTCGACTAGTACCAAAGGTTCACAAGCATTTGTTTAGGCATTGAACATTCCTTGAAGAATTTTTGGTTTGTACAGTATTAGAAGTTTTAAATAGTCTATCTGTCTTATCATATGAGCATTAAGCATTGGTTTATGATTTTGCATTGGTAAAAAGACGTAGAAGCAAGATATTTGAAATTTGTCAAGTCAGTTTGGGTTGTGGATAGGGCACACTTGCACGAATTCAGGTAACGGTCTCGGTTACGAGACGGAAAGAGAAAGAAAACTGTACCCGATAAGGGATGGGTATGCTTTTTAAAAGTTTGATAGTATAAATTCTGAGAATATTTCCATGCTGGTAGTAAACGCAATGAGCTCATGAGATTTTTTCATAGAATCTCTTGTAATTACGACTACTGTGCCACTTAGGTTTATAGTTCTCAAAACTCATTTTTGGTGGACTTTGTTCCAACCTTAATTTTCGATCTATCGAAGTTATTTATCTTACTCTA

Coding sequence (CDS)

ATGGAATCGGCGGAAGGGCTTAATCATTTCAAAGTTGGGCATCTTCCAACAGTGTTCTATATTCCCAACTTCATAACACACGACGATGAGACCATGCTTCTGGATAATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAATAGGAGGCTGCAAAATTGGGGGGGCATTGTACATGAAAAAGGTCTTCTACCCCAAGAATTGCCTATTTGGCTGACAAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCTTCATAATCAAGGCATAATGGTATGGACTAACCCGCACCAAGATGGCCCTGCTTACTTTCCTGTAGTAGCAATTCTATCTCTTGGTTCTCCTGTTGTTATGGACTTCACTCCCCATTCAAGGTTGAAATCATGTGCAGACCAGTTGACAGAAAACCTCGACGACAAAGATTCTAACGGAACGACTCACTGCCCTTTCTCTATTCTTCTAATGCCTCGTAGTTTGCTCATATTTAAAGATGAAGCTTATTCTGGTTATTTGCATGGTATCAGTGACAACAATCTTCAATGTTATGAACAGGCAGTGAACAAAACTGAAGTTCAAAACTGGCTGTTAGAAACAGAAAATAAGACCGTCAAAGTGAACAGCGATCATAGTTCTTTCGAGAGAACCAATACTCGAGTTTCATTGACATGTCGACTAGTACCAAAGGTTCACAAGCATTTGTTTAGGCATTGA

Protein sequence

MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYFPVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDDKDSNGTTHCPFSILLMPRSLLIFKDEAYSGYLHGISDNNLQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLTCRLVPKVHKHLFRH
Homology
[Close]
BLAST of Lsi01G011790 vs. Swiss-Prot
Match: ALKB6_XENLA (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis GN=alkbh6 PE=2 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.7e-36
Identity = 93/242 (38.43%), Postives = 124/242 (51.24%), Query Frame = 1 

Query: 7   LNHFKVGHLP-TVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGL 66
           L+ F V  +P   +Y+P +I+  +E  LL  +Y AP  KW  L  R+LQNWGG+ H +G+
Sbjct: 10  LDSFLVEKIPLAAYYVPEYISKSEEEYLLRQVYNAPKPKWTQLSGRKLQNWGGLPHSRGM 69

Query: 67  LPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYFPVVAI 126
           + ++LP WL   T +I           NHVL+NEY   +GIM    PH+DGP Y+P V  
Sbjct: 70  VQEKLPSWLQKYTDQISSLGVFGDHSANHVLVNEYNAGEGIM----PHEDGPMYYPTVTT 129

Query: 127 LSLGSPVVMDFTPHSRLKSCADQLTENLDDKDSNGTTHCPFSILLMPRSLLIFKDEAYSG 186
           +SLGS  ++DF      K C  Q T+N D   S        S+LL PRSLL+ ++E Y+ 
Sbjct: 130 ISLGSHTLLDFYVPIN-KEC--QETQNQDKVASTEEQRHMLSLLLEPRSLLVVREELYTS 189

Query: 187 YLHGISDNNLQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLTCRLVPKV 246
           YLHGI           V             N T        + +R  TRVSLT R VPKV
Sbjct: 190 YLHGICPRTSDTLSPMV---------ANLGNSTAHAG---DTLQR-GTRVSLTIRFVPKV 231

Query: 247 HK 248
            K
Sbjct: 250 LK 231

[Close]
BLAST of Lsi01G011790 vs. Swiss-Prot
Match: ALKB6_HUMAN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens GN=ALKBH6 PE=1 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.3e-35
Identity = 85/230 (36.96%), Postives = 123/230 (53.48%), Query Frame = 1 

Query: 16  PTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGLLPQELPIWLT 75
           P ++Y+P+FI+ ++E  LL  ++ AP  KW  L  R+LQNWGG+ H +G++P+ LP WL 
Sbjct: 21  PVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80

Query: 76  NITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYFPVVAILSLGSPVVMD 135
               K+   +     P NHVL+N+YL  +GIM    PH+DGP Y+P V+ +SLGS  V+D
Sbjct: 81  RYVDKVSNLSLFGGLPANHVLVNQYLPGEGIM----PHEDGPLYYPTVSTISLGSHTVLD 140

Query: 136 FTPHSRLKSCADQLTENLDDKDSNGTTHCPFSILLMPRSLLIFKDEAYSGYLHGISDNNL 195
           F    R +   D  TE         T     S+LL PRSLL+ +  AY+  LHGI+   +
Sbjct: 141 FYEPRRPED--DDPTEQPRPPPRPTT-----SLLLEPRSLLVLRGPAYTRLLHGIAAARV 200

Query: 196 QCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLTCRLVPKV 246
              + A +            N     ++   +     TRVSLT R VP+V
Sbjct: 201 DALDAASS----------PPNAAACPSARPGACLVRGTRVSLTIRRVPRV 229

[Close]
BLAST of Lsi01G011790 vs. Swiss-Prot
Match: ALKB6_MOUSE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus GN=Alkbh6 PE=2 SV=3)

HSP 1 Score: 147.5 bits (371), Expect = 1.9e-34
Identity = 84/230 (36.52%), Postives = 121/230 (52.61%), Query Frame = 1 

Query: 16  PTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGLLPQELPIWLT 75
           P ++Y+P+FI+ ++E  LL  ++ AP  KW  L  R+LQNWGG+ H +G++P+ LP WL 
Sbjct: 21  PLIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80

Query: 76  NITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYFPVVAILSLGSPVVMD 135
               K+   +     P NHVL+N+YL  +GIM    PH+DGP Y+P V+ +SLGS  V+D
Sbjct: 81  RYVDKVSDLSLFGGLPANHVLVNQYLPGEGIM----PHEDGPLYYPTVSTISLGSHTVLD 140

Query: 136 FTPHSRLKSCADQLTENLDDKDSNGTTHCPFSILLMPRSLLIFKDEAYSGYLHGISDNNL 195
           F           Q  +++  +          S+L+ PRSLL+ +  AY+  LHGIS    
Sbjct: 141 FYE-------PRQPDDDVPMEQPRPPQRPITSLLVEPRSLLVLRGTAYTRLLHGIS---- 200

Query: 196 QCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLTCRLVPKV 246
                A    E+    L       K     +   R  TRVSLT R VP+V
Sbjct: 201 -----ATRVDELDATSLPPNATACKSALPGAHLVR-GTRVSLTIRRVPRV 229

[Close]
BLAST of Lsi01G011790 vs. Swiss-Prot
Match: ALKB6_DANRE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio GN=alkbh6 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 9.7e-34
Identity = 86/231 (37.23%), Postives = 123/231 (53.25%), Query Frame = 1 

Query: 16  PTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGLLPQELPIWLT 75
           PTV+YIP+FI+  +E  LL  +Y+AP  KW  L  RRLQNWGG+ + KG+L ++LP WL 
Sbjct: 21  PTVYYIPDFISEAEEEFLLQQVYRAPKPKWTQLSGRRLQNWGGLPNPKGMLAEKLPDWLL 80

Query: 76  NITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYFPVVAILSLGSPVVMD 135
             T+KI           NHVL+NEY   +GIM    PH+DGP Y P V  +++GS  ++D
Sbjct: 81  EYTEKISALGAFAGKTANHVLVNEYKPGEGIM----PHEDGPLYHPTVTTITVGSHTLLD 140

Query: 136 F-TPHSRLKSCADQLTENLDDKDSNGTTHCPFSILLMPRSLLIFKDEAYSGYLHGISDNN 195
           F  P  + +  A Q  E          +    S+L+  +SLLI +D+ Y  YLHGI    
Sbjct: 141 FYRPVCQAEPDAPQTEE----------SRYMLSLLVQRKSLLILQDDMYKCYLHGI---- 200

Query: 196 LQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLTCRLVPKV 246
                + V +  +   ++   +   +V          +TRVSLT R VPK+
Sbjct: 201 -----RGVCEDVLSEHVVNISSTGAQVGDTLP----RSTRVSLTIRHVPKI 224

[Close]
BLAST of Lsi01G011790 vs. TrEMBL
Match: A0A0A0KKP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476660 PE=4 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.8e-125
Identity = 226/254 (88.98%), Postives = 235/254 (92.52%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           MES+EGLN  +VGHLPTVFYIPNFI+ D ET+LLDNIYKAP SKWKSLKNRRLQNWGGIV
Sbjct: 1   MESSEGLNRHQVGHLPTVFYIPNFISPDHETVLLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QET+LYPAPINHVLINEYL +QGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKIGQETSLYPAPINHVLINEYLLDQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDDKDSNGTTH--CPFSILLMPRSLLIF 180
           PVVAILSLGSPVVMDFTPHSRLKSCADQLTE +DDKDSNGTTH   PFSILLMPRSLLIF
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTEKVDDKDSNGTTHHPHPFSILLMPRSLLIF 180

Query: 181 KDEAYSGYLHGISDNNLQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLT 240
           KDEAYSGYLHGISDN+LQ YEQAVNKTEVQN LLETEN TVKVN DHSSFERTNTRVSLT
Sbjct: 181 KDEAYSGYLHGISDNSLQFYEQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTRVSLT 240

Query: 241 CRLVPKVHKHLFRH 253
           CRLVPKVHKHLFRH
Sbjct: 241 CRLVPKVHKHLFRH 250

[Close]
BLAST of Lsi01G011790 vs. TrEMBL
Match: A0A151U3X6_CAJCA (Alkylated DNA repair protein alkB isogeny 6 OS=Cajanus cajan GN=KK1_006697 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 9.9e-86
Identity = 165/266 (62.03%), Postives = 201/266 (75.56%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDN-IYKAPASKWKSLKNRRLQNWGGI 60
           ME  E L H+KVG LPT+FY+P+FIT  D+++LL+N IY APASKWKSLKNRRLQNWGG+
Sbjct: 1   MEVKEKLGHYKVGSLPTLFYVPDFITESDQSLLLNNVIYGAPASKWKSLKNRRLQNWGGV 60

Query: 61  VHEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAY 120
           VHEKGLLPQ LP WLTN+T+KIY+E+ L+P+ +NHVLINEYL NQGIM    PHQDGPAY
Sbjct: 61  VHEKGLLPQVLPPWLTNLTQKIYEESGLFPSAMNHVLINEYLPNQGIM----PHQDGPAY 120

Query: 121 FPVVAILSLGSPVVMDFTPHSRLK-SCADQLTENLD------DKDSNGTTHCPFSILLMP 180
           FPVVAILSLGSPVVMDFTPH+R K    D + +N D      +KD     H PFS+LLMP
Sbjct: 121 FPVVAILSLGSPVVMDFTPHARFKLDSQDDIDKNSDGGTFEIEKDKWLDDHHPFSVLLMP 180

Query: 181 RSLLIFKDEAYSGYLHGISDNNLQCYEQAVNKTEV------QNWLLETENKTVKV-NSDH 240
           RSLLIFKD+AYS YLHGI D  + CY+ AVN+TE          L+ +++ +  +   +H
Sbjct: 181 RSLLIFKDKAYSDYLHGIKDCMVHCYDGAVNETEALKHKESNGDLISSKDASETIGKEEH 240

Query: 241 SSFERTNTRVSLTCRLVPKVHKHLFR 252
            +  RT+ R+SLTCRLVPKVHK+LFR
Sbjct: 241 KNISRTSNRISLTCRLVPKVHKNLFR 262

[Close]
BLAST of Lsi01G011790 vs. TrEMBL
Match: A0A0L9VI65_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g057000 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 8.4e-85
Identity = 162/267 (60.67%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           ME  + L  +KVG LPT+FY+P+FIT  D+++LL+NIY+APASKWK LKNRRLQNWGG+V
Sbjct: 1   MEEKDNLGRYKVGSLPTLFYVPDFITDSDQSLLLNNIYEAPASKWKMLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ LP WLTN+T+KIY E+ L+P+ +NHVLINEY HNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQVLPPWLTNLTQKIYDESGLFPSAMNHVLINEYQHNQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDD----KDSNGTTHCPFSILLMPRSLL 180
           PVVAILSLGSPVVMDFTPH+R K  +    E   D    KD     H PFS+LLMPRSLL
Sbjct: 121 PVVAILSLGSPVVMDFTPHARFKQDSQDGIEKDSDFEIGKDEWLDDHHPFSVLLMPRSLL 180

Query: 181 IFKDEAYSGYLHGISDNNLQCYEQAVNKTEVQNW------------LLETENKTVKVNSD 240
           IFKD+AYS YLHGI D  + CY  AVN+T+   +             L+T  K      +
Sbjct: 181 IFKDKAYSDYLHGIKDCAIHCYNGAVNETQALKYKESDGDLFNLEDALDTTGK-----EE 240

Query: 241 HSSFERTNTRVSLTCRLVPKVHKHLFR 252
           + +  RT++RVSLTCRLVPKVHK+LFR
Sbjct: 241 YKNISRTSSRVSLTCRLVPKVHKNLFR 258

[Close]
BLAST of Lsi01G011790 vs. TrEMBL
Match: A0A0S3TBQ0_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G202600 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83
Identity = 162/269 (60.22%), Postives = 195/269 (72.49%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           ME  + L  +KVG LPT+FY+P+FIT  D+++LL+NIY+APASKWK LKNRRLQNWGG+V
Sbjct: 1   MEEKDNLGRYKVGSLPTLFYVPDFITDSDQSLLLNNIYEAPASKWKMLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ LP WLTN+T+KIY E+ L+P+ +NHVLINEY HNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQVLPPWLTNLTQKIYDESGLFPSAMNHVLINEYQHNQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDD----KDSNGTTHCPFSILLMPRSLL 180
           PVVAILSLGSPVVMDFTPH+R K  +    E   D    KD     H PFS+LLMPRSLL
Sbjct: 121 PVVAILSLGSPVVMDFTPHARFKQDSQDGIEKDSDFEIGKDEWLDDHHPFSVLLMPRSLL 180

Query: 181 IFKDEAYSGYLHGISDNNLQCYE--QAVNKTEVQNW------------LLETENKTVKVN 240
           IFKD+AYS YLHGI D  + CY   +AVN+T+   +             L+T  K     
Sbjct: 181 IFKDKAYSDYLHGIKDCAIHCYNGVRAVNETQALKYKESDGDLFNLEDALDTTGK----- 240

Query: 241 SDHSSFERTNTRVSLTCRLVPKVHKHLFR 252
            ++ +  RT++RVSLTCRLVPKVHK+LFR
Sbjct: 241 EEYKNISRTSSRVSLTCRLVPKVHKNLFR 260

[Close]
BLAST of Lsi01G011790 vs. TrEMBL
Match: V7C2R3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G131600g PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.7e-83
Identity = 162/262 (61.83%), Postives = 192/262 (73.28%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           ME  E L  +KVG LPT+FY+P+FIT  D+++LL+NIY+APASKWK LKNRRLQNWGG+V
Sbjct: 1   MEEKENLGQYKVGSLPTLFYVPDFITDSDQSLLLNNIYEAPASKWKMLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ LP WLTN+T+KIY E+ L+P+P+NHVLINEY  NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQVLPPWLTNLTQKIYDESALFPSPMNHVLINEYQPNQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLK-SCADQLTENLD---DKDSNGTTHCPFSILLMPRSLL 180
           PVVAILSLGSPVVMDFTPH+R K    D + ++ D    KD     H PF++LLMPRSLL
Sbjct: 121 PVVAILSLGSPVVMDFTPHARFKQDSQDDIDKDSDLEIGKDKWLDDHHPFTVLLMPRSLL 180

Query: 181 IFKDEAYSGYLHGISDNNLQCYEQAVNKT------EVQNWLLETENKTVKV-NSDHSSFE 240
           IFKD+AYS YLHGI D  L CY  AVN+T      E       +E+    +   ++ +  
Sbjct: 181 IFKDKAYSDYLHGIQDCMLHCYNGAVNETQALKHKESDGDFFNSEDALDTIGKEEYKNIS 240

Query: 241 RTNTRVSLTCRLVPKVHKHLFR 252
           RT  RVSLTCRLVPKVHK LFR
Sbjct: 241 RTANRVSLTCRLVPKVHKKLFR 258

[Close]
BLAST of Lsi01G011790 vs. TAIR10
Match: AT4G20350.2 (AT4G20350.2 oxidoreductases)

HSP 1 Score: 290.8 bits (743), Expect = 8.0e-79
Identity = 148/246 (60.16%), Postives = 181/246 (73.58%), Query Frame = 1 

Query: 7   LNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGLL 66
           L  F+VG  PTVFYIP FIT +++T LL++IY A  SKWK+LKNRRLQNWGG+VHEKGL+
Sbjct: 3   LERFRVGLTPTVFYIPGFITDEEQTQLLNHIYGASGSKWKTLKNRRLQNWGGMVHEKGLV 62

Query: 67  PQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYFPVVAIL 126
           PQELP WLT IT +I++ + L+P+ INHVLINEY  +QGIM    PHQDGPAYFPVVAIL
Sbjct: 63  PQELPPWLTKITAEIHESSGLFPSAINHVLINEYHPDQGIM----PHQDGPAYFPVVAIL 122

Query: 127 SLGSPVVMDFTPHSRLKSCADQLTENLDD-KDSNGTTHCPFSILLMPRSLLIFKDEAYSG 186
           SLGSPVVMDFTPH RL+S    ++++     +S       FS+LLMP+SLLIFKD+AYS 
Sbjct: 123 SLGSPVVMDFTPHLRLRSGDGYISKDQSPCAESCAPERDSFSVLLMPQSLLIFKDDAYSD 182

Query: 187 YLHGISDNNLQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLTCRLVPKV 246
           +LHGISD+  QCY Q VN+ E   +  E +++          F R  TRVSLTCRLVPKV
Sbjct: 183 FLHGISDSPTQCYNQVVNEAEALAYSNEEDSR----KDGDKIFHRDQTRVSLTCRLVPKV 240

Query: 247 HKHLFR 252
            K+LFR
Sbjct: 243 RKNLFR 240

[Close]
BLAST of Lsi01G011790 vs. NCBI nr
Match: gi|659125329|ref|XP_008462630.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Cucumis melo])

HSP 1 Score: 474.9 bits (1221), Expect = 8.5e-131
Identity = 232/254 (91.34%), Postives = 238/254 (93.70%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           MES+EGLN FKVGHLPTVFYIPNFI+HD ET LLDNIYKAP SKWKSLKNRRLQNWGGIV
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEYLHNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDDKDSNGTTH--CPFSILLMPRSLLIF 180
           PVVAILSLGSPVVMDFTPHSRLKSCAD+LTEN+DDKDSNGTTH   PFSILLMPRSLLIF
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGTTHQPHPFSILLMPRSLLIF 180

Query: 181 KDEAYSGYLHGISDNNLQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLT 240
           KDEAYSGYLHGISDN+LQCY QAVNKTEVQN LLETEN TVKVN DHSSFERTNTRVSLT
Sbjct: 181 KDEAYSGYLHGISDNSLQCYGQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTRVSLT 240

Query: 241 CRLVPKVHKHLFRH 253
           CRLVPKVHKHLFRH
Sbjct: 241 CRLVPKVHKHLFRH 250

[Close]
BLAST of Lsi01G011790 vs. NCBI nr
Match: gi|778717709|ref|XP_011657744.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-125
Identity = 226/254 (88.98%), Postives = 235/254 (92.52%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           MES+EGLN  +VGHLPTVFYIPNFI+ D ET+LLDNIYKAP SKWKSLKNRRLQNWGGIV
Sbjct: 1   MESSEGLNRHQVGHLPTVFYIPNFISPDHETVLLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QET+LYPAPINHVLINEYL +QGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKIGQETSLYPAPINHVLINEYLLDQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDDKDSNGTTH--CPFSILLMPRSLLIF 180
           PVVAILSLGSPVVMDFTPHSRLKSCADQLTE +DDKDSNGTTH   PFSILLMPRSLLIF
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTEKVDDKDSNGTTHHPHPFSILLMPRSLLIF 180

Query: 181 KDEAYSGYLHGISDNNLQCYEQAVNKTEVQNWLLETENKTVKVNSDHSSFERTNTRVSLT 240
           KDEAYSGYLHGISDN+LQ YEQAVNKTEVQN LLETEN TVKVN DHSSFERTNTRVSLT
Sbjct: 181 KDEAYSGYLHGISDNSLQFYEQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTRVSLT 240

Query: 241 CRLVPKVHKHLFRH 253
           CRLVPKVHKHLFRH
Sbjct: 241 CRLVPKVHKHLFRH 250

[Close]
BLAST of Lsi01G011790 vs. NCBI nr
Match: gi|659125333|ref|XP_008462632.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 [Cucumis melo])

HSP 1 Score: 380.6 bits (976), Expect = 2.2e-102
Identity = 183/202 (90.59%), Postives = 189/202 (93.56%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           MES+EGLN FKVGHLPTVFYIPNFI+HD ET LLDNIYKAP SKWKSLKNRRLQNWGGIV
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEYLHNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDDKDSNGTTH--CPFSILLMPRSLLIF 180
           PVVAILSLGSPVVMDFTPHSRLKSCAD+LTEN+DDKDSNGTTH   PFSILLMPRSLLIF
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGTTHQPHPFSILLMPRSLLIF 180

Query: 181 KDEAYSGYLHGISDNNLQCYEQ 201
           KDEAYSGYLHGISDN+LQCY Q
Sbjct: 181 KDEAYSGYLHGISDNSLQCYGQ 198

[Close]
BLAST of Lsi01G011790 vs. NCBI nr
Match: gi|950929633|ref|XP_014502684.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Vigna radiata var. radiata])

HSP 1 Score: 329.3 bits (843), Expect = 5.8e-87
Identity = 166/262 (63.36%), Postives = 193/262 (73.66%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIV 60
           ME  E L H+KVG LPT+FY+P+FIT  D+++LL+NIY+APASKWK LKNRRLQNWGG+V
Sbjct: 1   MEEKENLGHYKVGSLPTLFYVPDFITDSDQSLLLNNIYEAPASKWKMLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAYF 120
           HEKGLLPQ LP WLTN+T+KIY E+ L+P+ +NHVLINEY HNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQVLPPWLTNLTQKIYDESGLFPSAMNHVLINEYQHNQGIM----PHQDGPAYF 120

Query: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTENLDD----KDSNGTTHCPFSILLMPRSLL 180
           PVVAILSLGSPVVMDFTPH+R K  +    E   D    KD     H PFS+LLMPRSLL
Sbjct: 121 PVVAILSLGSPVVMDFTPHARFKQDSQDDIEKDSDFEIGKDKWLDDHHPFSVLLMPRSLL 180

Query: 181 IFKDEAYSGYLHGISDNNLQCYEQAVNKTEVQNW------LLETENK-TVKVNSDHSSFE 240
           IFKD+AYS YLHGI D  L CY  AVN+TE   +      L   EN        ++ +  
Sbjct: 181 IFKDKAYSDYLHGIKDCTLHCYNGAVNETEALKYKESDRDLFNLENALDTTGKEEYKNIS 240

Query: 241 RTNTRVSLTCRLVPKVHKHLFR 252
           RT+ RVSLTCRLVPKVHK+LFR
Sbjct: 241 RTSNRVSLTCRLVPKVHKNLFR 258

[Close]
BLAST of Lsi01G011790 vs. NCBI nr
Match: gi|1012362846|gb|KYP74029.1| (Alkylated DNA repair protein alkB isogeny 6 [Cajanus cajan])

HSP 1 Score: 324.7 bits (831), Expect = 1.4e-85
Identity = 165/266 (62.03%), Postives = 201/266 (75.56%), Query Frame = 1 

Query: 1   MESAEGLNHFKVGHLPTVFYIPNFITHDDETMLLDN-IYKAPASKWKSLKNRRLQNWGGI 60
           ME  E L H+KVG LPT+FY+P+FIT  D+++LL+N IY APASKWKSLKNRRLQNWGG+
Sbjct: 1   MEVKEKLGHYKVGSLPTLFYVPDFITESDQSLLLNNVIYGAPASKWKSLKNRRLQNWGGV 60

Query: 61  VHEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYLHNQGIMVWTNPHQDGPAY 120
           VHEKGLLPQ LP WLTN+T+KIY+E+ L+P+ +NHVLINEYL NQGIM    PHQDGPAY
Sbjct: 61  VHEKGLLPQVLPPWLTNLTQKIYEESGLFPSAMNHVLINEYLPNQGIM----PHQDGPAY 120

Query: 121 FPVVAILSLGSPVVMDFTPHSRLK-SCADQLTENLD------DKDSNGTTHCPFSILLMP 180
           FPVVAILSLGSPVVMDFTPH+R K    D + +N D      +KD     H PFS+LLMP
Sbjct: 121 FPVVAILSLGSPVVMDFTPHARFKLDSQDDIDKNSDGGTFEIEKDKWLDDHHPFSVLLMP 180

Query: 181 RSLLIFKDEAYSGYLHGISDNNLQCYEQAVNKTEV------QNWLLETENKTVKV-NSDH 240
           RSLLIFKD+AYS YLHGI D  + CY+ AVN+TE          L+ +++ +  +   +H
Sbjct: 181 RSLLIFKDKAYSDYLHGIKDCMVHCYDGAVNETEALKHKESNGDLISSKDASETIGKEEH 240

Query: 241 SSFERTNTRVSLTCRLVPKVHKHLFR 252
            +  RT+ R+SLTCRLVPKVHK+LFR
Sbjct: 241 KNISRTSNRISLTCRLVPKVHKNLFR 262

The following BLAST results are available for this feature:
BLAST of Lsi01G011790 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ALKB6_XENLA2.7e-3638.43Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis GN=al... [more]
ALKB6_HUMAN1.3e-3536.96Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens GN=ALKB... [more]
ALKB6_MOUSE1.9e-3436.52Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus GN=Alkb... [more]
ALKB6_DANRE9.7e-3437.23Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio GN=alkbh... [more]
BLAST of Lsi01G011790 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKP8_CUCSA2.8e-12588.98Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476660 PE=4 SV=1[more]
A0A151U3X6_CAJCA9.9e-8662.03Alkylated DNA repair protein alkB isogeny 6 OS=Cajanus cajan GN=KK1_006697 PE=4 ... [more]
A0A0L9VI65_PHAAN8.4e-8560.67Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g057000 PE=4 SV=1[more]
A0A0S3TBQ0_PHAAN1.2e-8360.22Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G202600 PE=... [more]
V7C2R3_PHAVU2.7e-8361.83Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G131600g PE=4 SV=1[more]
BLAST of Lsi01G011790 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G20350.28.0e-7960.16 oxidoreductases[more]
BLAST of Lsi01G011790 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125329|ref|XP_008462630.1|8.5e-13191.34PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [... [more]
gi|778717709|ref|XP_011657744.1|4.1e-12588.98PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sat... [more]
gi|659125333|ref|XP_008462632.1|2.2e-10290.59PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 [... [more]
gi|950929633|ref|XP_014502684.1|5.8e-8763.36PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Vigna radia... [more]
gi|1012362846|gb|KYP74029.1|1.4e-8562.03Alkylated DNA repair protein alkB isogeny 6 [Cajanus cajan][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
IPR005123Oxoglu/Fe-dep_dioxygenase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
molecular_function GO:0051213 dioxygenase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G011790.1Lsi01G011790.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005123Oxoglutarate/iron-dependent dioxygenasePROFILEPS51471FE2OG_OXYcoord: 91..243
score: 8
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likeGENE3DG3DSA:2.60.120.590coord: 229..243
score: 3.3E-28coord: 14..196
score: 3.3
IPR027450Alpha-ketoglutarate-dependent dioxygenase AlkB-likePFAMPF135322OG-FeII_Oxy_2coord: 53..240
score: 1.
NoneNo IPR availablePANTHERPTHR13069UNCHARACTERIZEDcoord: 8..247
score: 2.8
NoneNo IPR availableunknownSSF51197Clavaminate synthase-likecoord: 16..199
score: 5.22E-28coord: 229..243
score: 5.22

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G011790Csa6G476660Cucumber (Chinese Long) v2culsiB431
Lsi01G011790CSPI06G26120Wild cucumber (PI 183967)cpilsiB436
Lsi01G011790Cucsa.083850Cucumber (Gy14) v1cgylsiB087
Lsi01G011790CmaCh03G011150Cucurbita maxima (Rimu)cmalsiB597
Lsi01G011790CmoCh03G011050Cucurbita moschata (Rifu)cmolsiB582
Lsi01G011790Cla008405Watermelon (97103) v1lsiwmB142
Lsi01G011790MELO3C024592Melon (DHL92) v3.5.1lsimeB150
Lsi01G011790ClCG01G015060Watermelon (Charleston Gray)lsiwcgB127
Lsi01G011790MELO3C024592.2Melon (DHL92) v3.6.1lsimedB157
Lsi01G011790Cla97C01G014070Watermelon (97103) v2lsiwmbB115
Lsi01G011790Bhi03G001369Wax gourdlsiwgoB172
Lsi01G011790Cp4.1LG10g03720Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G011790CsGy6G025520Cucumber (Gy14) v2cgyblsiB398
Lsi01G011790Carg10516Silver-seed gourdcarlsiB214
Lsi01G011790CsaV3_6G041170Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G011790Cucurbita maxima (Rimu)cmalsiB786
Lsi01G011790Cucurbita moschata (Rifu)cmolsiB774
Lsi01G011790Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G011790Wild cucumber (PI 183967)cpilsiB020
Lsi01G011790Wild cucumber (PI 183967)cpilsiB440
Lsi01G011790Cucumber (Chinese Long) v2culsiB021
Lsi01G011790Cucumber (Gy14) v2cgyblsiB017
Lsi01G011790Silver-seed gourdcarlsiB742
Lsi01G011790Cucumber (Chinese Long) v3cuclsiB021
Lsi01G011790Watermelon (97103) v2lsiwmbB114
Lsi01G011790Wax gourdlsiwgoB183