ClCG01G015060 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATTTTAATCGTCTTTGCTCGTGTTGCGAAGATGAAGGTCTGAACTGAAATCTCACTTTCTTTCGTCTTTTCCTCTATCTATACACCTCTGTTCTTAGGGTTCTAAATCCTTCTGCAAATTGAGATTTTGAATCAGAGCCATGGAATCGGCGGAAGAGCTTAATCACTTCAAAGTTGGGCATCTTCCAACAGTGTTCTATATACCCAACTTCATAAGTCACGACGATGAGACCATGCTTCTGGATAATGTACCAAATTTCCCTATTGCTTTTAATTCTTTGCACTTCTTTGTCTCGTAATCGTTTCCTAAACTGGGTTAGTTTTCATTTGTAGATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAATAGGAGGCTGCAAAATTGGGGTATGTAGAAATTAGAATAGCTATCTTATATATTTTTTGCTATTTTTTGAAGCTCTAGACTCTTGAAAGATTTGTAAGGGGGTGAAACGCAACGTGAGATTATCCTCTTTGTCTTACTAATTATACTGCTTTCTTTATCCGTTGATTTCTTGCAGGGGGCATTGTACATGAAAAAGGTCTTCTACCCCAAGAATGTAAGTTTGGAAAAAAACTGTGCTTAAAATTGAAATGTTCTTTGTTAATTTTATCTGATGTATGCTGTATTGTATACTGCCTTCTTGCAATCAAGTTTAAGCTTGATGCATTGAGATACACTTCTTTTTTACTTGATTACAAAATTATAGCGTGCTTTTATTCATAATAAACTGGCTATATTCAAGGAAATAGTTCATTTTCTTCCTTGTGGTGTGTCACGTTTCCTTGAAACTGTTTAAAATTGAAAGACAGCGAATGGGAGAATTTTGATTCATGAGGAATTAACTTCAAATGGGAAATATAAGAAAACATTTACGGTGGATGAACGCGATGTGGAGGTTTGAAATGCCGAGGTTTCATTTTTGCTTTTGATCACGATGGGGAATTAATACTTTTGGCTAGACTAGTCTAATTCAATCTCCTCATGGGAATGGCAGAAAACAGCTGGAAAGACTTCATACTACCATCAACCTTTGGATTTGATCTTAGCGTGATCTTATGACCTTACTTGAAGAGGATCAGTTCCTTAGATTGTAGAACAGTGTCCTTGAGTTCTAAAGTTTTGAATCTTTTGATATTAGCGTGGTTTTCTTACCCATCTTCATTGGCTAGCTCTTATTTCGATGCCCCTTATGCTAAAGCGTGGATTTTACCACAATGATTACTTAAGTAGGATATTCAAGCATCCGTTTCATTTAACATTGTACACCACTTGATCCCTGAGCACGTTGCCAAAATTTGTTTCCATCAATCCCCTTATCTTGCATAATTTCGTTTCTGTTTTCTGCTGCGCCTAATTCTTCTCTATGGTTGCCACTCATCTTAATTTACATATATATTTCTTTACCTAAGGGAGTATAATATCGGAGAATGGAGATTTGCCTCTCTGGTTGTTAGGCGAACAAGTTGAACAAATCCAATCAGTTAAATTGACAAATCTCTGTCTGTTTTGCAGTGCCTATTTGGCTGACGAATATCAACAAGAAGATTTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCTTCATAATCAAGGCATAATGGTATAGCCGGACGTTTCCTTGTTCCTAGAGCATATCTTGTTCATATTATAATTATAGACAATGCCATGATCCCCATCATAGAGCTAATCTAGATGTACATTGACGTCCAATCTCTGAAAGAAAATATATCCATCATACATGAGTGTTGTATTTTATTTTTACCATCATTCATTCAACTCCCAACCATTTAACCAATTAGCAACATCTTAGTTCAACTCCCAACGGTTTAAACAGTTTTTGGTTCTTGTTTCGTGTAGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAGCAATTCTGTCTCTTGGTTCTCCTGTTGTTATGGACTTCACTCCCCATTCAAGGTTGAAATCATGTGCAGACCAGTTGACAGAAAATTTCGACGACAAAGATTCTAACGGAACAACTCACTGTCCTTTCTCTATTCTTCTAATGCCTCGTAGTTTGCTCATCTTTAAAGATGAAGCTTATTCTGGTAAATCTTGCCCTTGATTTTGTGAAACCTTCTCAGTTTAGTGAAGTTTGCCAATTGTTTTTTTTTTTTTTTTTTGTTGGCTTAATTTATTTGCCAGGTTATCTGCATGGTATCAGCGACAACAGTCTTCAATGTTATGAACAGGTATGACAACAACTAATTGGTTCTTAATATTCATTCTAGCATTGCAGTTTGTTTATCATTTCTTTGCTCTCTCAGGCAGTGAATAAAAATGAAGTTCAAAACTGTCTATTAGAATCAGAAAATGAAACCGTCAAAGTGAACCGTGATCATAGTTCTTTCGAGAGAACAAATACTCGAGTTTCGTTGACATGTAGACTAGTACCAAAGGTTCACAAGCATTTGCTTAGGCGTTGAACATCCCTTGAAGAAATTTTAGGTTTGTACAGTTTTAGAAGTTTAAAATTGTTTATCTAGCTATAGATTGCGCATTAACCATTGGTTTATAGTTTTGCATTGGGGAAAGACGTCGAAATAAATTATTTGAAATTGCCATTTTCAAG CAAAATTTTAATCGTCTTTGCTCGTGTTGCGAAGATGAAGGTCTGAACTGAAATCTCACTTTCTTTCGTCTTTTCCTCTATCTATACACCTCTGTTCTTAGGGTTCTAAATCCTTCTGCAAATTGAGATTTTGAATCAGAGCCATGGAATCGGCGGAAGAGCTTAATCACTTCAAAGTTGGGCATCTTCCAACAGTGTTCTATATACCCAACTTCATAAGTCACGACGATGAGACCATGCTTCTGGATAATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAATAGGAGGCTGCAAAATTGGGGGGGCATTGTACATGAAAAAGGTCTTCTACCCCAAGAATTGCCTATTTGGCTGACGAATATCAACAAGAAGATTTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCTTCATAATCAAGGCATAATGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAGCAATTCTGTCTCTTGGTTCTCCTGTTGTTATGGACTTCACTCCCCATTCAAGGTTGAAATCATGTGCAGACCAGTTGACAGAAAATTTCGACGACAAAGATTCTAACGGAACAACTCACTGTCCTTTCTCTATTCTTCTAATGCCTCGTAGTTTGCTCATCTTTAAAGATGAAGCTTATTCTGGTTATCTGCATGGTATCAGCGACAACAGTCTTCAATGTTATGAACAGGCAGTGAATAAAAATGAAGTTCAAAACTGTCTATTAGAATCAGAAAATGAAACCGTCAAAGTGAACCGTGATCATAGTTCTTTCGAGAGAACAAATACTCGAGTTTCGTTGACATGTAGACTAGTACCAAAGGTTCACAAGCATTTGCTTAGGCGTTGAACATCCCTTGAAGAAATTTTAGGTTTGTACAGTTTTAGAAGTTTAAAATTGTTTATCTAGCTATAGATTGCGCATTAACCATTGGTTTATAGTTTTGCATTGGGGAAAGACGTCGAAATAAATTATTTGAAATTGCCATTTTCAAG ATGGAATCGGCGGAAGAGCTTAATCACTTCAAAGTTGGGCATCTTCCAACAGTGTTCTATATACCCAACTTCATAAGTCACGACGATGAGACCATGCTTCTGGATAATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAATAGGAGGCTGCAAAATTGGGGGGGCATTGTACATGAAAAAGGTCTTCTACCCCAAGAATTGCCTATTTGGCTGACGAATATCAACAAGAAGATTTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCTTCATAATCAAGGCATAATGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAGCAATTCTGTCTCTTGGTTCTCCTGTTGTTATGGACTTCACTCCCCATTCAAGGTTGAAATCATGTGCAGACCAGTTGACAGAAAATTTCGACGACAAAGATTCTAACGGAACAACTCACTGTCCTTTCTCTATTCTTCTAATGCCTCGTAGTTTGCTCATCTTTAAAGATGAAGCTTATTCTGGTTATCTGCATGGTATCAGCGACAACAGTCTTCAATGTTATGAACAGGCAGTGAATAAAAATGAAGTTCAAAACTGTCTATTAGAATCAGAAAATGAAACCGTCAAAGTGAACCGTGATCATAGTTCTTTCGAGAGAACAAATACTCGAGTTTCGTTGACATGTAGACTAGTACCAAAGGTTCACAAGCATTTGCTTAGGCGTTGA MESAEELNHFKVGHLPTVFYIPNFISHDDETMLLDNIYKAPASKWKSLKNRRLQNWGGIVHEKGLLPQELPIWLTNINKKIYQETNLYPAPINHVLINEYLHNQGIMPHQDGPAYFPVVAILSLGSPVVMDFTPHSRLKSCADQLTENFDDKDSNGTTHCPFSILLMPRSLLIFKDEAYSGYLHGISDNSLQCYEQAVNKNEVQNCLLESENETVKVNRDHSSFERTNTRVSLTCRLVPKVHKHLLRR
BLAST of ClCG01G015060 vs. Swiss-Prot
Match: ALKB6_XENLA (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis GN=alkbh6 PE=2 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 4.1e-37 Identity = 92/239 (38.49%), Postives = 125/239 (52.30%), Query Frame = 1
BLAST of ClCG01G015060 vs. Swiss-Prot
Match: ALKB6_HUMAN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens GN=ALKBH6 PE=1 SV=2) HSP 1 Score: 155.2 bits (391), Expect = 9.2e-37 Identity = 89/226 (39.38%), Postives = 122/226 (53.98%), Query Frame = 1
BLAST of ClCG01G015060 vs. Swiss-Prot
Match: ALKB6_MOUSE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus GN=Alkbh6 PE=2 SV=3) HSP 1 Score: 151.0 bits (380), Expect = 1.7e-35 Identity = 85/226 (37.61%), Postives = 119/226 (52.65%), Query Frame = 1
BLAST of ClCG01G015060 vs. Swiss-Prot
Match: ALKB6_DANRE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio GN=alkbh6 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34 Identity = 86/227 (37.89%), Postives = 116/227 (51.10%), Query Frame = 1
BLAST of ClCG01G015060 vs. TrEMBL
Match: A0A0A0KKP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476660 PE=4 SV=1) HSP 1 Score: 453.0 bits (1164), Expect = 2.4e-124 Identity = 224/249 (89.96%), Postives = 231/249 (92.77%), Query Frame = 1
BLAST of ClCG01G015060 vs. TrEMBL
Match: A0A151U3X6_CAJCA (Alkylated DNA repair protein alkB isogeny 6 OS=Cajanus cajan GN=KK1_006697 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.8e-85 Identity = 162/262 (61.83%), Postives = 200/262 (76.34%), Query Frame = 1
BLAST of ClCG01G015060 vs. TrEMBL
Match: A0A0L9VI65_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g057000 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.2e-83 Identity = 157/259 (60.62%), Postives = 192/259 (74.13%), Query Frame = 1
BLAST of ClCG01G015060 vs. TrEMBL
Match: I3SBA3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 317.0 bits (811), Expect = 2.0e-83 Identity = 159/266 (59.77%), Postives = 194/266 (72.93%), Query Frame = 1
BLAST of ClCG01G015060 vs. TrEMBL
Match: K7MIS0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 5.9e-83 Identity = 160/262 (61.07%), Postives = 196/262 (74.81%), Query Frame = 1
BLAST of ClCG01G015060 vs. TAIR10
Match: AT4G20350.2 (AT4G20350.2 oxidoreductases) HSP 1 Score: 289.7 bits (740), Expect = 1.8e-78 Identity = 148/243 (60.91%), Postives = 176/243 (72.43%), Query Frame = 1
BLAST of ClCG01G015060 vs. NCBI nr
Match: gi|659125329|ref|XP_008462630.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Cucumis melo]) HSP 1 Score: 471.9 bits (1213), Expect = 7.1e-130 Identity = 230/249 (92.37%), Postives = 234/249 (93.98%), Query Frame = 1
BLAST of ClCG01G015060 vs. NCBI nr
Match: gi|778717709|ref|XP_011657744.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sativus]) HSP 1 Score: 453.0 bits (1164), Expect = 3.4e-124 Identity = 224/249 (89.96%), Postives = 231/249 (92.77%), Query Frame = 1
BLAST of ClCG01G015060 vs. NCBI nr
Match: gi|659125333|ref|XP_008462632.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 [Cucumis melo]) HSP 1 Score: 377.5 bits (968), Expect = 1.8e-101 Identity = 183/198 (92.42%), Postives = 186/198 (93.94%), Query Frame = 1
BLAST of ClCG01G015060 vs. NCBI nr
Match: gi|950929633|ref|XP_014502684.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Vigna radiata var. radiata]) HSP 1 Score: 323.9 bits (829), Expect = 2.4e-85 Identity = 162/258 (62.79%), Postives = 191/258 (74.03%), Query Frame = 1
BLAST of ClCG01G015060 vs. NCBI nr
Match: gi|1012362846|gb|KYP74029.1| (Alkylated DNA repair protein alkB isogeny 6 [Cajanus cajan]) HSP 1 Score: 323.2 bits (827), Expect = 4.1e-85 Identity = 162/262 (61.83%), Postives = 200/262 (76.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|