CmoCh03G011050 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G011050
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6
Location	Cmo_Chr03 : 8929379 .. 8932543 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGCAGTTCTTCTGTTCGGTGTAAGCTCTGAACTGAAGTTCTCATTTTCGTTCGTCTTCATCTCTTTCGTCAGTCAATCCATTTCTCCATATGCTTCTCTATTAGCATGTTTCTTTGAAATACAACTGCGGTTATCATTAGGGTTTTGATCTTCGATTCATCATTCCAAGAGACGGACCGGAAGAGTTCGTCCACCTCCCATCGTTTCTCCCTGGCTTGCTGTTTGCGCAATAATCTCCATCTATCTGTTCTTCGGCTGCTAAATCCCTCTGGAAATTGAGATTTTAAACCAGAGATATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGACGAGACTATGATTCTGGATAATGTACCAATTTTTACCATTGCTTTTCGTTCTTTGTCCTTTTTTTCGCCCTGTAATTGTTCGCTAAGCTAGGTAAGTTTCATTTGTAGATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTTTGTTGAATAGCGATCTCATGTATTTTTTGCTAATTTTTCGAAGTTCTGAATCTTTGAAAGATCTGTAAGATTGCTTTCCTTAACCATTGATTTCTTGCAGGTGGCGTTGTGCATGAAAAAGGTCTTCTTCCTCAAGAATGTAAGTAAAGAAAGAACTATATTTAAATGTTCTTAGTTAAGCTTAAACTTGATTGCCATATATCAGCTAAAATTAATGCATGGAGATAGACTTCTTATTGACTTGATTACAGAATTCTAGCATGCTCTATTCATAATAACTTTCTATATTCAAGGTAATAGTACATTTTGTTCCCTGTTCTGTGCAATTTTTTCTTGAACGTTTAAAAATTGAAGACAACCAATGGGAGAAATTTGGTTCATGAGAAATTAACTTCAAATTGGAAGTATAAGGCAACTTATAGGATAGGTGAACACAATGTGGAGGTTTGGAATGCAGCAAATTTCATTTTTGTCTTTCTGTTGGCTGTACTACCAAATTTAACTTTTGCTTTTGATTACGTTGGGGAATTAATACTTTTGGTTAGACTAGTTTAATTCAACCGCCTCGTGGGAATGATAGAAAACAGCTGGAAAGACTTATACTGTGAGATTCCATATTGGTTGGAGACGGGAATGACCATTCCTTATAAGGGTGTGGAAACCTCTTCTTAGTAGATGCGTTTTAAAATCGTGAGTCCGACGACGATACGTAACAGGTTAAAACGGACAATATTTGCTAGCAGTGGGTTTGAGTTTTTACAAATGGTATCAGAGCCAAACACCGAGCGGTGTGTCGACGAGGACGTTAGGCCCCTAAGAGGGGTGGATTGTGAGATCCCATATCGGTTGGAGACGGGAACGAACCATTCCTTATAAGGGTGTAGGAACCTTTCCCTAGCAGACGCATTTTAAAACCGATGGCGATACGTAACGAGCGAAAGTAGACAATATCTAATAACGGTGGGCTTGGGCTGTTACATATACTGCCATCAAGCTTGCAATTGGATATTAGTGCGGGTTTATGAACTTACTTGAAGAGAATCTGTTCTATAGATTTTATAATGGTGTCCTTTGAGCTCTAAAGTTTTGATATTAGCACGGTTTTCTTACTCATCTACGTTGGGTAGTCCATATTTTCATGTCCCTTACGCAAAAACTTGGATATTTCACATTCTTCTACAACGATTGCTTAAGTAGGACAAACAAGCATCCATATCATTTATCATAGTACACCACTTGACCCTATGCAGGTTGCCAAAATTTGTTTCCATCAAGCCATTTATTCTTGTATAATTTGTTTCCATCAAGCCATTTATTCTTTGTATAATTTGTTTCCATCAAGCCATTTATTCTTGTATAATTTGTTTCTGTTTTCTGCTGTGCCTAATTCTCCTCTATGGTTGGCACTCATCTTGATTTACAGCTTTACATATATGTTCCTTTCTCTAAGAGATTTGCCTCTCTGGATGTTAGGTGAAAAAATTGGACGAATTCAATCAGTTAAATTAACAAATCTCTGTCTTTTGATGTTCTGCAGTGCCTATATGGCTGACGAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAGCTGACGTTTGCCCATTCTTAGCGCAGTTCTTGTTTGAATTATAATTATGTTCTTGCCAAGATCCTCATCATAGAACTAATCTAGTGCTGTACTTTACCAATTAGCAACATCTTAGAAACAGTTTTTGGTTCTTGTGTAGCCACACCAAGATGGGCCTGCGTACTTTCCGGTAGTAACAATTCTGTCTCTCGGTTCTCCTGTCGTTATGGACTTCACTCCCCATTTGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAGCTTCGACGACAAGGATTCTAATGGAGCTTCTGATGTCGAGACTCACCGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCGGGTAAATCTTGCTATTGATTTTGTCTTTTAACCATCCCTGCTTACTTGATTTTATCTTCTAATGCCTCGTAGGTTACTTGCATGGCATCAGTGACAATAGTCTTCAATGTTATGAACAGGTATGATAACGACTAAATGTAGCTTTTGCAGGATCTAATTGATTCTTGATATTGATTTCATCATTGCAAGTTTGTTTTTCATTTCTTTGCTTTCTCAGGCAGTGAACAAAATTGAAGTTCGTAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTCTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGAACGGCTCTTGAAGAAACTTTTGGTTTGTACAATATCACAAGTTCTAAATTGGCTATCCTAGGTTCGTTAACCATTGGTTTATGATTTTATAGTTTAATAATATGAGGTAAAGGATTCAAATTTTTAATTTCTTAGTCGTTGGTATGTATTTATAAGTTGAGTTATAACGGTTGAAAATTACCACGCAAAATTGACGGTCAAAATTA

mRNA sequence

GCAGCAGTTCTTCTGTTCGGTGTAAGCTCTGAACTGAAGTTCTCATTTTCGTTCGTCTTCATCTCTTTCGTCAGTCAATCCATTTCTCCATATGCTTCTCTATTAGCATGTTTCTTTGAAATACAACTGCGGTTATCATTAGGGTTTTGATCTTCGATTCATCATTCCAAGAGACGGACCGGAAGAGTTCGTCCACCTCCCATCGTTTCTCCCTGGCTTGCTGTTTGCGCAATAATCTCCATCTATCTGTTCTTCGGCTGCTAAATCCCTCTGGAAATTGAGATTTTAAACCAGAGATATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGACGAGACTATGATTCTGGATAATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTGGCGTTGTGCATGAAAAAGGTCTTCTTCCTCAAGAATTGCCTATATGGCTGACGAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAGCTGACCCACACCAAGATGGGCCTGCGTACTTTCCGGTAGTAACAATTCTGTCTCTCGGTTCTCCTGTCGTTATGGACTTCACTCCCCATTTGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAGCTTCGACGACAAGGATTCTAATGGAGCTTCTGATGTCGAGACTCACCGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCGGGTTACTTGCATGGCATCAGTGACAATAGTCTTCAATGTTATGAACAGGCAGTGAACAAAATTGAAGTTCGTAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTCTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGAACGGCTCTTGAAGAAACTTTTGGTTTGTACAATATCACAAGTTCTAAATTGGCTATCCTAGGTTCGTTAACCATTGGTTTATGATTTTATAGTTTAATAATATGAGGTAAAGGATTCAAATTTTTAATTTCTTAGTCGTTGGTATGTATTTATAAGTTGAGTTATAACGGTTGAAAATTACCACGCAAAATTGACGGTCAAAATTA

Coding sequence (CDS)

ATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGACGAGACTATGATTCTGGATAATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTGGCGTTGTGCATGAAAAAGGTCTTCTTCCTCAAGAATTGCCTATATGGCTGACGAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAGCTGACCCACACCAAGATGGGCCTGCGTACTTTCCGGTAGTAACAATTCTGTCTCTCGGTTCTCCTGTCGTTATGGACTTCACTCCCCATTTGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAGCTTCGACGACAAGGATTCTAATGGAGCTTCTGATGTCGAGACTCACCGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCGGGTTACTTGCATGGCATCAGTGACAATAGTCTTCAATGTTATGAACAGGCAGTGAACAAAATTGAAGTTCGTAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTCTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGA

Homology

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BLAST of CmoCh03G011050 vs. Swiss-Prot
Match: ALKB6_XENLA (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis GN=alkbh6 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 5.6e-37
Identity = 94/246 (38.21%), Postives = 130/246 (52.85%), Query Frame = 1


Query: 7   LNHFKVGLLP-TVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGL 66
           L+ F V  +P   +Y+P++IS  +E  +L  +Y AP  KW  L  R+LQNWGG+ H +G+
Sbjct: 10  LDSFLVEKIPLAAYYVPEYISKSEEEYLLRQVYNAPKPKWTQLSGRKLQNWGGLPHSRGM 69

Query: 67  LPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFPVVTI 126
           + ++LP WL   T +I           NHVL+NEY   +GIM    PH+DGP Y+P VT 
Sbjct: 70  VQEKLPSWLQKYTDQISSLGVFGDHSANHVLVNEYNAGEGIM----PHEDGPMYYPTVTT 129

Query: 127 LSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLLVFKDE 186
           +SLGS  ++DF   +  K C  Q T++ D      AS  E     S+LL PRSLLV ++E
Sbjct: 130 ISLGSHTLLDFYVPIN-KEC--QETQNQD----KVASTEEQRHMLSLLLEPRSLLVVREE 189

Query: 187 AYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRL 246
            Y+ YLHGI   +       V  +          N T        + +R   R+SLT R 
Sbjct: 190 LYTSYLHGICPRTSDTLSPMVANL---------GNSTAHAG---DTLQR-GTRVSLTIRF 231

Query: 247 VPKVHK 252
           VPKV K
Sbjct: 250 VPKVLK 231

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BLAST of CmoCh03G011050 vs. Swiss-Prot
Match: ALKB6_HUMAN (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens GN=ALKBH6 PE=1 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 3.6e-36
Identity = 84/234 (35.90%), Postives = 119/234 (50.85%), Query Frame = 1


Query: 16  PTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLT 75
           P ++Y+PDFIS E+E  +L  ++ AP  KW  L  R+LQNWGG+ H +G++P+ LP WL 
Sbjct: 21  PVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80

Query: 76  NITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFPVVTILSLGSPVVMD 135
               K+   +     P NHVL+N+Y P +GIM    PH+DGP Y+P V+ +SLGS  V+D
Sbjct: 81  RYVDKVSNLSLFGGLPANHVLVNQYLPGEGIM----PHEDGPLYYPTVSTISLGSHTVLD 140

Query: 136 FTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLLVFKDEAYSGYLHGIS 195
           F    R            +D D             S+LL PRSLLV +  AY+  LHGI 
Sbjct: 141 FYEPRRP-----------EDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGI- 200

Query: 196 DNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKV 250
                    A  +++  +      N     +    +      R+SLT R VP+V
Sbjct: 201 ---------AAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRVPRV 229

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BLAST of CmoCh03G011050 vs. Swiss-Prot
Match: ALKB6_MOUSE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus GN=Alkbh6 PE=2 SV=3)

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-35
Identity = 84/239 (35.15%), Postives = 124/239 (51.88%), Query Frame = 1


Query: 16  PTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLT 75
           P ++Y+PDFIS E+E  +L  ++ AP  KW  L  R+LQNWGG+ H +G++P+ LP WL 
Sbjct: 21  PLIYYVPDFISKEEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQ 80

Query: 76  NITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFPVVTILSLGSPVVMD 135
               K+   +     P NHVL+N+Y P +GIM    PH+DGP Y+P V+ +SLGS  V+D
Sbjct: 81  RYVDKVSDLSLFGGLPANHVLVNQYLPGEGIM----PHEDGPLYYPTVSTISLGSHTVLD 140

Query: 136 FTPHLRLKSCPDQLTESFDDKDSNGASDVETHRP-----FSILLMPRSLLVFKDEAYSGY 195
           F                ++ +  +    +E  RP      S+L+ PRSLLV +  AY+  
Sbjct: 141 F----------------YEPRQPDDDVPMEQPRPPQRPITSLLVEPRSLLVLRGTAYTRL 200

Query: 196 LHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKV 250
           LHGIS            +++  +      N T   +    +      R+SLT R VP+V
Sbjct: 201 LHGIS----------ATRVDELDATSLPPNATACKSALPGAHLVRGTRVSLTIRRVPRV 229

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BLAST of CmoCh03G011050 vs. Swiss-Prot
Match: ALKB6_DANRE (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio GN=alkbh6 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-35
Identity = 84/234 (35.90%), Postives = 119/234 (50.85%), Query Frame = 1


Query: 16  PTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLT 75
           PTV+YIPDFIS+ +E  +L  +Y+AP  KW  L  RRLQNWGG+ + KG+L ++LP WL 
Sbjct: 21  PTVYYIPDFISEAEEEFLLQQVYRAPKPKWTQLSGRRLQNWGGLPNPKGMLAEKLPDWLL 80

Query: 76  NITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFPVVTILSLGSPVVMD 135
             T+KI           NHVL+NEY+P +GIM    PH+DGP Y P VT +++GS  ++D
Sbjct: 81  EYTEKISALGAFAGKTANHVLVNEYKPGEGIM----PHEDGPLYHPTVTTITVGSHTLLD 140

Query: 136 FTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLLVFKDEAYSGYLHGIS 195
           F                    + +     E+    S+L+  +SLL+ +D+ Y  YLHGI 
Sbjct: 141 F-------------YRPVCQAEPDAPQTEESRYMLSLLVQRKSLLILQDDMYKCYLHGIR 200

Query: 196 DNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLVPKV 250
                   + V  I      +    P              + R+SLT R VPK+
Sbjct: 201 GVCEDVLSEHVVNISSTGAQVGDTLP-------------RSTRVSLTIRHVPKI 224

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BLAST of CmoCh03G011050 vs. TrEMBL
Match: A0A0A0KKP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476660 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 7.1e-116
Identity = 211/257 (82.10%), Postives = 226/257 (87.94%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN  +VG LPTVFYIP+FIS + ET++LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRHQVGHLPTVFYIPNFISPDHETVLLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QET+LYPAPINHVLINEY  +QGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKIGQETSLYPAPINHVLINEYLLDQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETH--RPFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC DQLTE  DDKDSNG     TH   PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTEKVDDKDSNGT----THHPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQ YEQAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQFYEQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

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BLAST of CmoCh03G011050 vs. TrEMBL
Match: A0A151U3X6_CAJCA (Alkylated DNA repair protein alkB isogeny 6 OS=Cajanus cajan GN=KK1_006697 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.8e-85
Identity = 165/272 (60.66%), Postives = 201/272 (73.90%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDN-IYKAPASKWKSLKNRRLQNWGGV 60
           ME  E L H+KVG LPT+FY+PDFI++ D++++L+N IY APASKWKSLKNRRLQNWGGV
Sbjct: 1   MEVKEKLGHYKVGSLPTLFYVPDFITESDQSLLLNNVIYGAPASKWKSLKNRRLQNWGGV 60

Query: 61  VHEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAY 120
           VHEKGLLPQ LP WLTN+T+KIY+E+ L+P+ +NHVLINEY PNQGIM    PHQDGPAY
Sbjct: 61  VHEKGLLPQVLPPWLTNLTQKIYEESGLFPSAMNHVLINEYLPNQGIM----PHQDGPAY 120

Query: 121 FPVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSN---GASDVE------THRPF 180
           FPVV ILSLGSPVVMDFTPH R K       +S DD D N   G  ++E       H PF
Sbjct: 121 FPVVAILSLGSPVVMDFTPHARFK------LDSQDDIDKNSDGGTFEIEKDKWLDDHHPF 180

Query: 181 SILLMPRSLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEV------RNCLLETENPTVE 240
           S+LLMPRSLL+FKD+AYS YLHGI D  + CY+ AVN+ E          L+ +++ +  
Sbjct: 181 SVLLMPRSLLIFKDKAYSDYLHGIKDCMVHCYDGAVNETEALKHKESNGDLISSKDASET 240

Query: 241 VNC-NHSSFERTNNRLSLTCRLVPKVHKHLFR 256
           +    H +  RT+NR+SLTCRLVPKVHK+LFR
Sbjct: 241 IGKEEHKNISRTSNRISLTCRLVPKVHKNLFR 262

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BLAST of CmoCh03G011050 vs. TrEMBL
Match: G7KMG1_MEDTR (2OG-Fe(II) oxygenase family protein OS=Medicago truncatula GN=MTR_6g059320 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 6.5e-85
Identity = 163/265 (61.51%), Postives = 201/265 (75.85%), Query Frame = 1


Query: 5   EGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKG 64
           + L+ FKVG LPT+FYIPDFISD D+T++L+NIY AP+SKWK LKNRRLQNWGGVVHEKG
Sbjct: 9   QNLSDFKVGSLPTLFYIPDFISDTDQTLLLNNIYGAPSSKWKLLKNRRLQNWGGVVHEKG 68

Query: 65  LLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFPVVT 124
           LLPQ LP WLTN T+KI +E+ L+P+PINHVLINEY+PNQGIM    PHQDGP+YFPVV 
Sbjct: 69  LLPQPLPSWLTNFTQKISEESGLFPSPINHVLINEYQPNQGIM----PHQDGPSYFPVVA 128

Query: 125 ILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASD-------VETHRPFSILLMPR 184
           ILSLGSPVVMDFTPH +LK    ++T    DK+S+G +        ++ HRPFS++LMPR
Sbjct: 129 ILSLGSPVVMDFTPHAKLKLDSQEVT----DKESDGETFEIGKDKWLDDHRPFSVILMPR 188

Query: 185 SLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEV------RNCLLETENPTVEVNC-NHS 244
           SLL+FKD+AYS YLHGI D +L  Y+ AVN+IE          L  +E+    +    + 
Sbjct: 189 SLLIFKDKAYSDYLHGIKDCALHGYDGAVNEIEALKHNESDKHLFGSEDALEAIGKEEYK 248

Query: 245 SFERTNNRLSLTCRLVPKVHKHLFR 256
           +  RT+NR+SLTCRLVPKVHK+LFR
Sbjct: 249 NISRTSNRISLTCRLVPKVHKNLFR 265

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BLAST of CmoCh03G011050 vs. TrEMBL
Match: V7C2R3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G131600g PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.9e-84
Identity = 158/262 (60.31%), Postives = 190/262 (72.52%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           ME  E L  +KVG LPT+FY+PDFI+D D++++L+NIY+APASKWK LKNRRLQNWGGVV
Sbjct: 1   MEEKENLGQYKVGSLPTLFYVPDFITDSDQSLLLNNIYEAPASKWKMLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ LP WLTN+T+KIY E+ L+P+P+NHVLINEY+PNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQVLPPWLTNLTQKIYDESALFPSPMNHVLINEYQPNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLL 180
           PVV ILSLGSPVVMDFTPH R K       +   D +      ++ H PF++LLMPRSLL
Sbjct: 121 PVVAILSLGSPVVMDFTPHARFKQDSQDDIDKDSDLEIGKDKWLDDHHPFTVLLMPRSLL 180

Query: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKI------EVRNCLLETENPTVEVNC-NHSSFE 240
           +FKD+AYS YLHGI D  L CY  AVN+       E       +E+    +    + +  
Sbjct: 181 IFKDKAYSDYLHGIQDCMLHCYNGAVNETQALKHKESDGDFFNSEDALDTIGKEEYKNIS 240

Query: 241 RTNNRLSLTCRLVPKVHKHLFR 256
           RT NR+SLTCRLVPKVHK LFR
Sbjct: 241 RTANRVSLTCRLVPKVHKKLFR 258

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BLAST of CmoCh03G011050 vs. TrEMBL
Match: I3SBA3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.2e-84
Identity = 160/271 (59.04%), Postives = 196/271 (72.32%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           M++ E L+ +KVG LPTVFY+PDFI+D +ET +L NIY   ASKWK +KNRRLQNWGGVV
Sbjct: 1   MDAEEKLSCYKVGSLPTVFYVPDFITDSEETFLLHNIYGVNASKWKPMKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ LP WLTN+TK++Y+E  L+P+P+NHVLINEY PNQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQPLPPWLTNLTKRMYEELGLFPSPLNHVLINEYLPNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGAS-------DVETHRPFSIL 180
           PVV ILSLGSP VMDFTPH RLK      T    DKDS G +        ++ H PFS+L
Sbjct: 121 PVVAILSLGSPAVMDFTPHARLKLDSQDNT----DKDSEGGTLEIGEEKWLDDHHPFSVL 180

Query: 181 LMPRSLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEV--------RNCLLETENPTV-E 240
           LMPRSLL+FKD+AYS YLHGI D+++ CY+  +N+ E          +C  E    T+ +
Sbjct: 181 LMPRSLLIFKDQAYSDYLHGIQDSAVHCYDGVINETEALKYKESDGHHCSSEEALETIGK 240

Query: 241 VNCNHSSFERTNNRLSLTCRLVPKVHKHLFR 256
             C   +  RT+NR+SLTCR+VPKVHK+LFR
Sbjct: 241 EEC--KNIPRTSNRVSLTCRMVPKVHKNLFR 261

[Close]

BLAST of CmoCh03G011050 vs. TAIR10
Match: AT4G20350.2 (AT4G20350.2 oxidoreductases)

HSP 1 Score: 296.2 bits (757), Expect = 1.9e-80
Identity = 149/249 (59.84%), Postives = 180/249 (72.29%), Query Frame = 1


Query: 7   LNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVHEKGLL 66
           L  F+VGL PTVFYIP FI+DE++T +L++IY A  SKWK+LKNRRLQNWGG+VHEKGL+
Sbjct: 3   LERFRVGLTPTVFYIPGFITDEEQTQLLNHIYGASGSKWKTLKNRRLQNWGGMVHEKGLV 62

Query: 67  PQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFPVVTIL 126
           PQELP WLT IT +I++ + L+P+ INHVLINEY P+QGIM    PHQDGPAYFPVV IL
Sbjct: 63  PQELPPWLTKITAEIHESSGLFPSAINHVLINEYHPDQGIM----PHQDGPAYFPVVAIL 122

Query: 127 SLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLLVFKDEA 186
           SLGSPVVMDFTPHLRL+S    +++   D+     S       FS+LLMP+SLL+FKD+A
Sbjct: 123 SLGSPVVMDFTPHLRLRSGDGYISK---DQSPCAESCAPERDSFSVLLMPQSLLIFKDDA 182

Query: 187 YSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNRLSLTCRLV 246
           YS +LHGISD+  QCY Q VN+ E     L   N           F R   R+SLTCRLV
Sbjct: 183 YSDFLHGISDSPTQCYNQVVNEAEA----LAYSNEEDSRKDGDKIFHRDQTRVSLTCRLV 240

Query: 247 PKVHKHLFR 256
           PKV K+LFR
Sbjct: 243 PKVRKNLFR 240

[Close]

BLAST of CmoCh03G011050 vs. NCBI nr
Match: gi|659125329|ref|XP_008462630.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [Cucumis melo])

HSP 1 Score: 434.5 bits (1116), Expect = 1.3e-118
Identity = 214/257 (83.27%), Postives = 228/257 (88.72%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN FKVG LPTVFYIP+FIS + ET +LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEY  NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHR--PFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC D+LTE+ DDKDSNG     TH+  PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGT----THQPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQCY QAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQCYGQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

[Close]

BLAST of CmoCh03G011050 vs. NCBI nr
Match: gi|778717709|ref|XP_011657744.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sativus])

HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-115
Identity = 211/257 (82.10%), Postives = 226/257 (87.94%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN  +VG LPTVFYIP+FIS + ET++LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRHQVGHLPTVFYIPNFISPDHETVLLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QET+LYPAPINHVLINEY  +QGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKIGQETSLYPAPINHVLINEYLLDQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETH--RPFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC DQLTE  DDKDSNG     TH   PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADQLTEKVDDKDSNGT----THHPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSSFERTNNR 240
           LL+FKDEAYSGYLHGISDNSLQ YEQAVNK EV+NCLLETEN TV+VN +HSSFERTN R
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQFYEQAVNKTEVQNCLLETENATVKVNRDHSSFERTNTR 240

Query: 241 LSLTCRLVPKVHKHLFR 256
           +SLTCRLVPKVHKHLFR
Sbjct: 241 VSLTCRLVPKVHKHLFR 249

[Close]

BLAST of CmoCh03G011050 vs. NCBI nr
Match: gi|659125333|ref|XP_008462632.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 [Cucumis melo])

HSP 1 Score: 349.0 bits (894), Expect = 7.1e-93
Identity = 171/206 (83.01%), Postives = 181/206 (87.86%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           MES+EGLN FKVG LPTVFYIP+FIS + ET +LDNIYKAP SKWKSLKNRRLQNWGG+V
Sbjct: 1   MESSEGLNRFKVGHLPTVFYIPNFISHDHETALLDNIYKAPVSKWKSLKNRRLQNWGGIV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ+LPIWLTNITKKI QETNLYPAPINHVLINEY  NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQDLPIWLTNITKKISQETNLYPAPINHVLINEYLHNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHR--PFSILLMPRS 180
           PVV ILSLGSPVVMDFTPH RLKSC D+LTE+ DDKDSNG     TH+  PFSILLMPRS
Sbjct: 121 PVVAILSLGSPVVMDFTPHSRLKSCADELTENIDDKDSNGT----THQPHPFSILLMPRS 180

Query: 181 LLVFKDEAYSGYLHGISDNSLQCYEQ 205
           LL+FKDEAYSGYLHGISDNSLQCY Q
Sbjct: 181 LLIFKDEAYSGYLHGISDNSLQCYGQ 198

[Close]

BLAST of CmoCh03G011050 vs. NCBI nr
Match: gi|950929633|ref|XP_014502684.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Vigna radiata var. radiata])

HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85
Identity = 161/262 (61.45%), Postives = 191/262 (72.90%), Query Frame = 1


Query: 1   MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVV 60
           ME  E L H+KVG LPT+FY+PDFI+D D++++L+NIY+APASKWK LKNRRLQNWGGVV
Sbjct: 1   MEEKENLGHYKVGSLPTLFYVPDFITDSDQSLLLNNIYEAPASKWKMLKNRRLQNWGGVV 60

Query: 61  HEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYF 120
           HEKGLLPQ LP WLTN+T+KIY E+ L+P+ +NHVLINEY+ NQGIM    PHQDGPAYF
Sbjct: 61  HEKGLLPQVLPPWLTNLTQKIYDESGLFPSAMNHVLINEYQHNQGIM----PHQDGPAYF 120

Query: 121 PVVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNGASDVETHRPFSILLMPRSLL 180
           PVV ILSLGSPVVMDFTPH R K       E   D +      ++ H PFS+LLMPRSLL
Sbjct: 121 PVVAILSLGSPVVMDFTPHARFKQDSQDDIEKDSDFEIGKDKWLDDHHPFSVLLMPRSLL 180

Query: 181 VFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNC------LLETENPTVEVNC-NHSSFE 240
           +FKD+AYS YLHGI D +L CY  AVN+ E          L   EN         + +  
Sbjct: 181 IFKDKAYSDYLHGIKDCTLHCYNGAVNETEALKYKESDRDLFNLENALDTTGKEEYKNIS 240

Query: 241 RTNNRLSLTCRLVPKVHKHLFR 256
           RT+NR+SLTCRLVPKVHK+LFR
Sbjct: 241 RTSNRVSLTCRLVPKVHKNLFR 258

[Close]

BLAST of CmoCh03G011050 vs. NCBI nr
Match: gi|502162781|ref|XP_004512614.1| (PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cicer arietinum])

HSP 1 Score: 325.1 bits (832), Expect = 1.1e-85
Identity = 169/268 (63.06%), Postives = 200/268 (74.63%), Query Frame = 1


Query: 2   ESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDNIYKAPASKWKSLKNRRLQNWGGVVH 61
           ES + L +FKVG LPT+FYIPDFI+D  +T++L+NIY AP+SKWK LKNRRLQNWGGVVH
Sbjct: 4   ESKQKLTNFKVGSLPTLFYIPDFITDTHQTLLLNNIYGAPSSKWKLLKNRRLQNWGGVVH 63

Query: 62  EKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMVRADPHQDGPAYFP 121
           EKGLLPQ LP WLTN T+KI +E+ L+P+PINHVLINEY+PNQGIM    PHQDGP+YFP
Sbjct: 64  EKGLLPQTLPPWLTNFTQKISEESGLFPSPINHVLINEYQPNQGIM----PHQDGPSYFP 123

Query: 122 VVTILSLGSPVVMDFTPHLRLKSCPDQLTESFDDKDSNG-----ASD--VETHRPFSILL 181
           VV ILSLGSPVVMDFTPH RLK          D KDSNG     A D  ++ HRPFSI+L
Sbjct: 124 VVAILSLGSPVVMDFTPHARLK---------LDSKDSNGEITEIAKDKWLDDHRPFSIIL 183

Query: 182 MPRSLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEV------RNCLLETENPTVEVNC- 241
           MPRSLL+FKD+AYS YLHGI D ++  Y+ AVN+ EV         L  TE+    V   
Sbjct: 184 MPRSLLIFKDQAYSDYLHGIKDCAVHGYDGAVNETEVLKHNESDRHLFGTEDALETVGKE 243

Query: 242 NHSSFERTNNRLSLTCRLVPKVHKHLFR 256
            + +  RT+NR+SLTCRLVPKVHK+LFR
Sbjct: 244 EYKNISRTSNRISLTCRLVPKVHKNLFR 258

The following BLAST results are available for this feature:

BLAST of CmoCh03G011050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALKB6_XENLA	5.6e-37	38.21	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis GN=al...	[more]
ALKB6_HUMAN	3.6e-36	35.90	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens GN=ALKB...	[more]
ALKB6_MOUSE	1.4e-35	35.15	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus GN=Alkb...	[more]
ALKB6_DANRE	2.3e-35	35.90	Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio GN=alkbh...	[more]

BLAST of CmoCh03G011050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKP8_CUCSA	7.1e-116	82.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G476660 PE=4 SV=1	[more]
A0A151U3X6_CAJCA	3.8e-85	60.66	Alkylated DNA repair protein alkB isogeny 6 OS=Cajanus cajan GN=KK1_006697 PE=4 ...	[more]
G7KMG1_MEDTR	6.5e-85	61.51	2OG-Fe(II) oxygenase family protein OS=Medicago truncatula GN=MTR_6g059320 PE=4 ...	[more]
V7C2R3_PHAVU	1.9e-84	60.31	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G131600g PE=4 SV=1	[more]
I3SBA3_LOTJA	7.2e-84	59.04	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CmoCh03G011050 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20350.2	1.9e-80	59.84	oxidoreductases	[more]

BLAST of CmoCh03G011050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659125329\|ref\|XP_008462630.1\|	1.3e-118	83.27	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 [...	[more]
gi\|778717709\|ref\|XP_011657744.1\|	1.0e-115	82.10	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucumis sat...	[more]
gi\|659125333\|ref\|XP_008462632.1\|	7.1e-93	83.01	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X2 [...	[more]
gi\|950929633\|ref\|XP_014502684.1\|	1.1e-85	61.45	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Vigna radia...	[more]
gi\|502162781\|ref\|XP_004512614.1\|	1.1e-85	63.06	PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cicer ariet...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005123	Oxoglu/Fe-dep_dioxygenase
IPR027450	AlkB-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0051213	dioxygenase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G011050.1	CmoCh03G011050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROFILE	PS51471	FE2OG_OXY	coord: 91..247 score: 8
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	GENE3D	G3DSA:2.60.120.590		coord: 233..247 score: 1.0E-28coord: 14..200 score: 1.0
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	PFAM	PF13532	2OG-FeII_Oxy_2	coord: 52..244 score: 6.5
None	No IPR available	PANTHER	PTHR13069	UNCHARACTERIZED	coord: 164..251 score: 2.3E-88coord: 8..142 score: 2.3
None	No IPR available	unknown	SSF51197	Clavaminate synthase-like	coord: 14..203 score: 2.33E-28coord: 233..247 score: 2.33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G011050	Cucsa.083850	Cucumber (Gy14) v1	cgycmoB0148
CmoCh03G011050	CmaCh03G011150	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G011050	Cla008405	Watermelon (97103) v1	cmowmB620
CmoCh03G011050	Csa6G476660	Cucumber (Chinese Long) v2	cmocuB668
CmoCh03G011050	MELO3C024592	Melon (DHL92) v3.5.1	cmomeB598
CmoCh03G011050	ClCG01G015060	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G011050	CSPI06G26120	Wild cucumber (PI 183967)	cmocpiB679
CmoCh03G011050	Lsi01G011790	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G011050	Cp4.1LG10g03720	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G011050	MELO3C024592.2	Melon (DHL92) v3.6.1	cmomedB687
CmoCh03G011050	CsaV3_6G041170	Cucumber (Chinese Long) v3	cmocucB0794
CmoCh03G011050	Cla97C01G014070	Watermelon (97103) v2	cmowmbB642
CmoCh03G011050	Bhi03G001369	Wax gourd	cmowgoB0784
CmoCh03G011050	CsGy6G025520	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G011050	Carg10516	Silver-seed gourd	carcmoB0336

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G011050	Cucurbita moschata (Rifu)	cmocmoB455
CmoCh03G011050	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G011050	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G011050	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G011050	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G011050	Silver-seed gourd	carcmoB1095