Lsi01G011460 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G011460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Pectinesterase inhibitor
Location	chr01 : 9635464 .. 9635883 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCTCCCTTAAATCTGACCCCACCAGCCTCACCGCCGACACCAAGGGCCTCGCCGCCATCATGGCTTCTATCGGTGCCGCTAACGCCACCGCCACCGCCACCTACCTCTCGTCTCAGCTCCCTACCTCCGCCGCCGCAGCCGCCACCAACAACAAAACAAAACTTCTGAGACAATGCTCCGAAAAATACGCATTTGCGGCGGAAGCCCTTAGAGCCGCTTTGAAAGACTTGGCTGATGAGACTTATGACTATGCGTATATGCATGTCTCTGCGGCGGCGGATTATGCCAATGTTTGCCGTGATGCCTTCAGAGGGTTCCCGGCGGTGAGTTATCCGGCGAAGCTTGGCCGGAGAGAAGAAGGGTTGAAGCGTATTTGCAGAGTGGTTTTGGGGATTTTGGATCTTCTTGGCTGGTGA

mRNA sequence

ATGTCCTCCCTTAAATCTGACCCCACCAGCCTCACCGCCGACACCAAGGGCCTCGCCGCCATCATGGCTTCTATCGGTGCCGCTAACGCCACCGCCACCGCCACCTACCTCTCGTCTCAGCTCCCTACCTCCGCCGCCGCAGCCGCCACCAACAACAAAACAAAACTTCTGAGACAATGCTCCGAAAAATACGCATTTGCGGCGGAAGCCCTTAGAGCCGCTTTGAAAGACTTGGCTGATGAGACTTATGACTATGCGTATATGCATGTCTCTGCGGCGGCGGATTATGCCAATGTTTGCCGTGATGCCTTCAGAGGGTTCCCGGCGGTGAGTTATCCGGCGAAGCTTGGCCGGAGAGAAGAAGGGTTGAAGCGTATTTGCAGAGTGGTTTTGGGGATTTTGGATCTTCTTGGCTGGTGA

Coding sequence (CDS)

ATGTCCTCCCTTAAATCTGACCCCACCAGCCTCACCGCCGACACCAAGGGCCTCGCCGCCATCATGGCTTCTATCGGTGCCGCTAACGCCACCGCCACCGCCACCTACCTCTCGTCTCAGCTCCCTACCTCCGCCGCCGCAGCCGCCACCAACAACAAAACAAAACTTCTGAGACAATGCTCCGAAAAATACGCATTTGCGGCGGAAGCCCTTAGAGCCGCTTTGAAAGACTTGGCTGATGAGACTTATGACTATGCGTATATGCATGTCTCTGCGGCGGCGGATTATGCCAATGTTTGCCGTGATGCCTTCAGAGGGTTCCCGGCGGTGAGTTATCCGGCGAAGCTTGGCCGGAGAGAAGAAGGGTTGAAGCGTATTTGCAGAGTGGTTTTGGGGATTTTGGATCTTCTTGGCTGGTGA

Protein sequence

MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQCSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRREEGLKRICRVVLGILDLLGW

Homology

[Close]

BLAST of Lsi01G011460 vs. Swiss-Prot
Match: CVIF2_ARATH (Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana GN=C/VIF2 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.4e-31
Identity = 78/137 (56.93%), Postives = 97/137 (70.80%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQC 60
           +S+LKSDP S TADTKGLA+IM  +G  NAT+TA Y++  L  SA    T  K K+L+ C
Sbjct: 45  VSALKSDPRSPTADTKGLASIMVGVGMTNATSTANYIAGNL--SATVKDTVLK-KVLQDC 104

Query: 61  SEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRRE 120
           SEKYA AA++LR  ++DL DE YDYA MHV AA DY NVCR+ FR    ++YP ++ RRE
Sbjct: 105 SEKYALAADSLRLTIQDLDDEAYDYASMHVLAAQDYPNVCRNIFRRVKGLAYPVEIRRRE 164

Query: 121 EGLKRICRVVLGILDLL 138
             L+RIC VV GILD L
Sbjct: 165 ASLRRICGVVSGILDRL 178

[Close]

BLAST of Lsi01G011460 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 4.2e-07
Identity = 48/138 (34.78%), Postives = 71/138 (51.45%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTK-LLRQ 60
           + +L+SDP S + D KGL      I  A+A  T     S++  S    AT+ K K     
Sbjct: 51  LQALESDPRSASKDLKGLGQFSIDIAQASAKQT-----SKIIASLTNQATDPKLKGRYET 110

Query: 61  CSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRR 120
           CSE YA A ++L  A + L    Y+   ++ SAA D A  C D+F G P +  P +L + 
Sbjct: 111 CSENYADAIDSLGQAKQFLTSGDYNSLNIYASAAFDGAGTCEDSFEGPPNI--PTQLHQA 170

Query: 121 EEGLKRICRVVLGILDLL 138
           +  L+ +C +VL I +LL
Sbjct: 171 DLKLEDLCDIVLVISNLL 181

[Close]

BLAST of Lsi01G011460 vs. TrEMBL
Match: A0A0A0KJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483430 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 2.0e-59
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAA-ATNNKTKLLRQ 60
           MSSLKSDP SLTADTKGLA IMASIGAANATATA+YLSSQLPTS++ A A NNKTKLLRQ
Sbjct: 50  MSSLKSDPASLTADTKGLAVIMASIGAANATATASYLSSQLPTSSSGAGANNNKTKLLRQ 109

Query: 61  CSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRR 120
           CSEKYAFAAEALR +LKDL DET+DYAYMHVSAAADYANVCRDAF+GFPAVSYP KLGRR
Sbjct: 110 CSEKYAFAAEALRESLKDLGDETFDYAYMHVSAAADYANVCRDAFKGFPAVSYPTKLGRR 169

Query: 121 EEGLKRICRVVLGILDLLGW 140
           EEGLKRICRVVLGILDLLGW
Sbjct: 170 EEGLKRICRVVLGILDLLGW 189

[Close]

BLAST of Lsi01G011460 vs. TrEMBL
Match: M5W386_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021753mg PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-37
Identity = 85/139 (61.15%), Postives = 109/139 (78.42%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQC 60
           +S+LKSDPTS TADTKGLA IM  IG ANATAT++YLSSQL +S       N  K+L++C
Sbjct: 45  VSTLKSDPTSKTADTKGLAVIMVGIGMANATATSSYLSSQLVSSRNN--DTNMKKVLKEC 104

Query: 61  SEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRRE 120
           ++KY FA +AL+A++KDLA E+YDYA MH++AAADY N C +AF+ +PA++YP +L RRE
Sbjct: 105 ADKYGFAGDALQASVKDLASESYDYASMHINAAADYPNACHNAFKRYPALAYPPELARRE 164

Query: 121 EGLKRICRVVLGILDLLGW 140
           EGLK IC V LGI+D  GW
Sbjct: 165 EGLKHICDVALGIIDNFGW 181

[Close]

BLAST of Lsi01G011460 vs. TrEMBL
Match: W9SL32_9ROSA (Pectinesterase inhibitor OS=Morus notabilis GN=L484_013831 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.0e-37
Identity = 86/141 (60.99%), Postives = 110/141 (78.01%), Query Frame = 1


Query: 1   MSSLKSDPTSLTA-DTKGLAAIMASIGAANATATATYLSSQLP-TSAAAAATNNKTKLLR 60
           +SSLKSDPTSL A D KGLA IM +IG AN+TAT+ Y+SSQLP T+   AA   K  + +
Sbjct: 52  VSSLKSDPTSLQASDAKGLANIMIAIGVANSTATSAYISSQLPSTTTTTAAAAKKKAVFK 111

Query: 61  QCSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGR 120
           +C++KY +AAEAL+A+ +DLA E++DY YMHV+AAADY N C +AFR +P + YP +L R
Sbjct: 112 ECADKYGYAAEALQASAQDLAAESFDYTYMHVTAAADYPNSCHNAFRRYPGLPYPTELAR 171

Query: 121 REEGLKRICRVVLGILDLLGW 140
           RE+GLKRIC VVLGI+D LGW
Sbjct: 172 REDGLKRICDVVLGIIDNLGW 192

[Close]

BLAST of Lsi01G011460 vs. TrEMBL
Match: A0A061DKC0_THECC (Cell wall / vacuolar inhibitor of fructosidase 2 OS=Theobroma cacao GN=TCM_001440 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-34
Identity = 82/142 (57.75%), Postives = 107/142 (75.35%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKT---KLL 60
           +SSLKSDPTSL +DTKGLA I+  +G ANATAT+T+LSSQL       +T N T   K+L
Sbjct: 102 VSSLKSDPTSLNSDTKGLATILVGVGMANATATSTFLSSQL------LSTTNDTILKKVL 161

Query: 61  RQCSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLG 120
           ++CS+KYA A +AL+A+++D   E+YDYAYMHV AAA+Y N C +AFR +P + Y  ++ 
Sbjct: 162 KECSDKYAHAGDALQASVRDFESESYDYAYMHVMAAAEYPNACHNAFRRYPGLVYTREIV 221

Query: 121 RREEGLKRICRVVLGILDLLGW 140
           RREEGLK IC VVLGI+D LG+
Sbjct: 222 RREEGLKHICDVVLGIIDHLGF 237

[Close]

BLAST of Lsi01G011460 vs. TrEMBL
Match: B9HEP8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s03920g PE=4 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 4.1e-33
Identity = 79/138 (57.25%), Postives = 107/138 (77.54%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQC 60
           +SSLK++ TS   DTKGLA IM  +G ANATAT++YLSSQL ++A    T    K+LR+C
Sbjct: 127 VSSLKTNATSTKTDTKGLALIMIGVGMANATATSSYLSSQLLSTAPNDPTMK--KVLREC 186

Query: 61  SEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRRE 120
           ++KY +AA AL+ +++DLA E+YDYAYMHV  A+DY N CR+AFR +P ++YP++L RRE
Sbjct: 187 ADKYGYAANALQDSVQDLATESYDYAYMHVMGASDYPNACRNAFRRYPGLAYPSELARRE 246

Query: 121 EGLKRICRVVLGILDLLG 139
           +GLK IC VVLG++D LG
Sbjct: 247 DGLKHICDVVLGMIDHLG 262

[Close]

BLAST of Lsi01G011460 vs. TAIR10
Match: AT5G64620.1 (AT5G64620.1 cell wall / vacuolar inhibitor of fructosidase 2)

HSP 1 Score: 134.4 bits (337), Expect = 5.3e-32
Identity = 78/137 (56.93%), Postives = 97/137 (70.80%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQC 60
           +S+LKSDP S TADTKGLA+IM  +G  NAT+TA Y++  L  SA    T  K K+L+ C
Sbjct: 45  VSALKSDPRSPTADTKGLASIMVGVGMTNATSTANYIAGNL--SATVKDTVLK-KVLQDC 104

Query: 61  SEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRRE 120
           SEKYA AA++LR  ++DL DE YDYA MHV AA DY NVCR+ FR    ++YP ++ RRE
Sbjct: 105 SEKYALAADSLRLTIQDLDDEAYDYASMHVLAAQDYPNVCRNIFRRVKGLAYPVEIRRRE 164

Query: 121 EGLKRICRVVLGILDLL 138
             L+RIC VV GILD L
Sbjct: 165 ASLRRICGVVSGILDRL 178

[Close]

BLAST of Lsi01G011460 vs. NCBI nr
Match: gi|659080910|ref|XP_008441045.1| (PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Cucumis melo])

HSP 1 Score: 242.7 bits (618), Expect = 3.9e-61
Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAA--ATNNKTKLLR 60
           MSSLKSDP+SLTADTKGLA IMASIGAANATAT+TYLSSQLPTS++AA  A NNKTKLLR
Sbjct: 49  MSSLKSDPSSLTADTKGLAIIMASIGAANATATSTYLSSQLPTSSSAATNANNNKTKLLR 108

Query: 61  QCSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGR 120
           QCSEKYAFAAEALR +LKDLADETYDYAYMHVSAAADYANVCRDAF+GFPAVSYPAKLGR
Sbjct: 109 QCSEKYAFAAEALRESLKDLADETYDYAYMHVSAAADYANVCRDAFKGFPAVSYPAKLGR 168

Query: 121 REEGLKRICRVVLGILDLLGW 140
           REEGLKRICRVVLGILDLLGW
Sbjct: 169 REEGLKRICRVVLGILDLLGW 189

[Close]

BLAST of Lsi01G011460 vs. NCBI nr
Match: gi|449461841|ref|XP_004148650.1| (PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 2.8e-59
Identity = 126/140 (90.00%), Postives = 132/140 (94.29%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAA-ATNNKTKLLRQ 60
           MSSLKSDP SLTADTKGLA IMASIGAANATATA+YLSSQLPTS++ A A NNKTKLLRQ
Sbjct: 50  MSSLKSDPASLTADTKGLAVIMASIGAANATATASYLSSQLPTSSSGAGANNNKTKLLRQ 109

Query: 61  CSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRR 120
           CSEKYAFAAEALR +LKDL DET+DYAYMHVSAAADYANVCRDAF+GFPAVSYP KLGRR
Sbjct: 110 CSEKYAFAAEALRESLKDLGDETFDYAYMHVSAAADYANVCRDAFKGFPAVSYPTKLGRR 169

Query: 121 EEGLKRICRVVLGILDLLGW 140
           EEGLKRICRVVLGILDLLGW
Sbjct: 170 EEGLKRICRVVLGILDLLGW 189

[Close]

BLAST of Lsi01G011460 vs. NCBI nr
Match: gi|470103918|ref|XP_004288374.1| (PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 167.9 bits (424), Expect = 1.2e-38
Identity = 89/139 (64.03%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQC 60
           MSSLKS+PTSLTAD KGLAAI+  I  ANATAT++YLSSQ+ +SA  A   N  K+L++C
Sbjct: 48  MSSLKSNPTSLTADGKGLAAIIVGIATANATATSSYLSSQVLSSANDA---NAKKVLKEC 107

Query: 61  SEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRRE 120
           ++KY +A EAL+ +L+DLA E+YDYAYMH++AAADY N C +AFR FPA+ YP +L RRE
Sbjct: 108 ADKYGYAGEALQGSLQDLAAESYDYAYMHITAAADYPNACHNAFRRFPALVYPPELARRE 167

Query: 121 EGLKRICRVVLGILDLLGW 140
           E LKRIC VVLGI+D  GW
Sbjct: 168 EALKRICSVVLGIIDSFGW 183

[Close]

BLAST of Lsi01G011460 vs. NCBI nr
Match: gi|595833188|ref|XP_007206622.1| (hypothetical protein PRUPE_ppa021753mg [Prunus persica])

HSP 1 Score: 163.7 bits (413), Expect = 2.3e-37
Identity = 85/139 (61.15%), Postives = 109/139 (78.42%), Query Frame = 1


Query: 1   MSSLKSDPTSLTADTKGLAAIMASIGAANATATATYLSSQLPTSAAAAATNNKTKLLRQC 60
           +S+LKSDPTS TADTKGLA IM  IG ANATAT++YLSSQL +S       N  K+L++C
Sbjct: 45  VSTLKSDPTSKTADTKGLAVIMVGIGMANATATSSYLSSQLVSSRNN--DTNMKKVLKEC 104

Query: 61  SEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGRRE 120
           ++KY FA +AL+A++KDLA E+YDYA MH++AAADY N C +AF+ +PA++YP +L RRE
Sbjct: 105 ADKYGFAGDALQASVKDLASESYDYASMHINAAADYPNACHNAFKRYPALAYPPELARRE 164

Query: 121 EGLKRICRVVLGILDLLGW 140
           EGLK IC V LGI+D  GW
Sbjct: 165 EGLKHICDVALGIIDNFGW 181

[Close]

BLAST of Lsi01G011460 vs. NCBI nr
Match: gi|703160200|ref|XP_010112447.1| (Pectinesterase inhibitor [Morus notabilis])

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-36
Identity = 86/141 (60.99%), Postives = 110/141 (78.01%), Query Frame = 1


Query: 1   MSSLKSDPTSLTA-DTKGLAAIMASIGAANATATATYLSSQLP-TSAAAAATNNKTKLLR 60
           +SSLKSDPTSL A D KGLA IM +IG AN+TAT+ Y+SSQLP T+   AA   K  + +
Sbjct: 52  VSSLKSDPTSLQASDAKGLANIMIAIGVANSTATSAYISSQLPSTTTTTAAAAKKKAVFK 111

Query: 61  QCSEKYAFAAEALRAALKDLADETYDYAYMHVSAAADYANVCRDAFRGFPAVSYPAKLGR 120
           +C++KY +AAEAL+A+ +DLA E++DY YMHV+AAADY N C +AFR +P + YP +L R
Sbjct: 112 ECADKYGYAAEALQASAQDLAAESFDYTYMHVTAAADYPNSCHNAFRRYPGLPYPTELAR 171

Query: 121 REEGLKRICRVVLGILDLLGW 140
           RE+GLKRIC VVLGI+D LGW
Sbjct: 172 REDGLKRICDVVLGIIDNLGW 192

The following BLAST results are available for this feature:

BLAST of Lsi01G011460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CVIF2_ARATH	9.4e-31	56.93	Cell wall / vacuolar inhibitor of fructosidase 2 OS=Arabidopsis thaliana GN=C/VI...	[more]
PMEI_ACTDE	4.2e-07	34.78	Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2	[more]

BLAST of Lsi01G011460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ03_CUCSA	2.0e-59	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G483430 PE=4 SV=1	[more]
M5W386_PRUPE	1.6e-37	61.15	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021753mg PE=4 SV=1	[more]
W9SL32_9ROSA	8.0e-37	60.99	Pectinesterase inhibitor OS=Morus notabilis GN=L484_013831 PE=4 SV=1	[more]
A0A061DKC0_THECC	6.3e-34	57.75	Cell wall / vacuolar inhibitor of fructosidase 2 OS=Theobroma cacao GN=TCM_00144...	[more]
B9HEP8_POPTR	4.1e-33	57.25	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s03920g PE=4 SV=2	[more]

BLAST of Lsi01G011460 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64620.1	5.3e-32	56.93	cell wall / vacuolar inhibitor of fructosidase 2	[more]

BLAST of Lsi01G011460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080910\|ref\|XP_008441045.1\|	3.9e-61	92.20	PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Cucumis melo]	[more]
gi\|449461841\|ref\|XP_004148650.1\|	2.8e-59	90.00	PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Cucumis sativus]	[more]
gi\|470103918\|ref\|XP_004288374.1\|	1.2e-38	64.03	PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Fragaria vesca subs...	[more]
gi\|595833188\|ref\|XP_007206622.1\|	2.3e-37	61.15	hypothetical protein PRUPE_ppa021753mg [Prunus persica]	[more]
gi\|703160200\|ref\|XP_010112447.1\|	1.1e-36	60.99	Pectinesterase inhibitor [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004857	enzyme inhibitor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR006501	Pectinesterase_inhib_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043086	negative regulation of catalytic activity
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0080167	response to karrikin
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004857	enzyme inhibitor activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G011460.1	Lsi01G011460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006501	Pectinesterase inhibitor domain	GENE3D	G3DSA:1.20.140.40		coord: 1..137 score: 5.9
IPR006501	Pectinesterase inhibitor domain	PFAM	PF04043	PMEI	coord: 1..132 score: 6.7
IPR006501	Pectinesterase inhibitor domain	SMART	SM00856	PMEI_2	coord: 1..133 score: 4.
IPR006501	Pectinesterase inhibitor domain	TIGRFAMs	TIGR01614	TIGR01614	coord: 1..136 score: 1.1
IPR006501	Pectinesterase inhibitor domain	unknown	SSF101148	Plant invertase/pectin methylesterase inhibitor	coord: 1..137 score: 3.01
None	No IPR available	PANTHER	PTHR31080	FAMILY NOT NAMED	coord: 1..139 score: 2.5
None	No IPR available	PANTHER	PTHR31080:SF1	CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2-RELATED	coord: 1..139 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G011460	Csa6G483430	Cucumber (Chinese Long) v2	culsiB434
Lsi01G011460	CSPI06G26530	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G011460	Cucsa.100990	Cucumber (Gy14) v1	cgylsiB125
Lsi01G011460	CmoCh07G008200	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G011460	Cla008440	Watermelon (97103) v1	lsiwmB142
Lsi01G011460	MELO3C008049	Melon (DHL92) v3.5.1	lsimeB150
Lsi01G011460	ClCG01G015470	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G011460	MELO3C008049.2	Melon (DHL92) v3.6.1	lsimedB157
Lsi01G011460	Bhi03G001051	Wax gourd	lsiwgoB183
Lsi01G011460	Cp4.1LG19g12140	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G011460	Cp4.1LG10g03490	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G011460	CsGy6G025980	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G011460	Carg10539	Silver-seed gourd	carlsiB214
Lsi01G011460	Carg05307	Silver-seed gourd	carlsiB742
Lsi01G011460	CsaV3_6G041710	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G011460	Watermelon (97103) v2	lsiwmbB115
Lsi01G011460	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G011460	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G011460	Cucurbita moschata (Rifu)	cmolsiB582