Lsi01G010760 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G010760
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_55
Location	chr01 : 8944921 .. 8946036 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAGTTTTCTCGATTCAGATGTTGTTTGATTACTAAATGACTGGATGCACCTGAGTGAGTTAAGCGACTAGCCTGAAATGTCTGAGTTTTCTTGTTTAAACTGTTGGTTGGTTACTAAATCACCAAATACATTTGTTTCAATACTTGAATTTTACAGATAACAGCAAGAATGACATTCTTGTTTCTCGTTATAACATACTGTCCTGGGGTCGCTTTCTGTCTTAAATTTGGTCTGAGAAATATAGAGCTATCAAATTTTAAATATTTTTGGGAACATTGTATACTTCTTTGTTGTCTTGGTTTTTCTCTCTCACAGTAAGAGACCGACCCTTGTCATTTTTTTTCCGTTTAATTTGTTAACCAACTCCATACCAGAACTTTTTAATTGTTTTAGATGAGTTTAGTCTGAATATTGGTAGGTTTATCCTATATCATACTATTATAGCCATAAATTGATGGTTGAATGAGCGGTCCATCAATATTACATTTCCCCCTATTCTTTTTTTGTTGGTGCAGCATCAAGGGAGAAGAGAGCTGATGGTGGAAGTATGGTGGTCGCTATTGGGGGCAGCTATCCCAGCAGTAGTTGCAGGGCAAGCATACAGAATGAGGAGGAGGCATTCTGAGGAGCAGAGAATAAAGACTGCTAGGGGAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCGAAGAGAATGTTGAAGAAGGTAGGGTCTTTCTCGAAAGATCCAATTCCTGATACTTGCGTGACTGTCTGTGGATTATCTGAGCTTGATGCCTGCACAGATGCATGTGCTCGCACTGTTTGTGTGAACCAGCATCAAGTACCAAATTGGAATGACGTTTGTCTTAGGAGATGCCAAAGTGAATGTCTTAAGCTTTCTGCTTCACATTCATCTTAGTGAAATGATACGATGCGTAAATAATGCAGTTTTTCTAGTATTGCATTTTGAATTGTGAACATTGGCCTGGAATTTTTGGCTTTCTGGAGATGATATGAAATGTTTTTCTCAATTTACCCATGTTTATCTTGTTACACAATATTGCTTCTTTAAGATTCCAGATTGCTTGCAATTATTAGCCCCTCCCTCGCCCC

mRNA sequence

ATGGCAAATAACAGCAAGAATGACATTCTTCATCAAGGGAGAAGAGAGCTGATGGTGGAAGTATGGTGGTCGCTATTGGGGGCAGCTATCCCAGCAGTAGTTGCAGGGCAAGCATACAGAATGAGGAGGAGGCATTCTGAGGAGCAGAGAATAAAGACTGCTAGGGGAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCGAAGAGAATGTTGAAGAAGGTAGGGTCTTTCTCGAAAGATCCAATTCCTGATACTTGCGTGACTGTCTGTGGATTATCTGAGCTTGATGCCTGCACAGATGCATGTGCTCGCACTGTTTGTGTGAACCAGCATCAAGTACCAAATTGGAATGACGTTTGTCTTAGGAGATGCCAAAGTGAATGTCTTAAGCTTTCTGCTTCACATTCATCTTAGTGAAATGATACGATGCGTAAATAATGCAGTTTTTCTAGTATTGCATTTTGAATTGTGAACATTGGCCTGGAATTTTTGGCTTTCTGGAGATGATATGAAATGTTTTTCTCAATTTACCCATGTTTATCTTGTTACACAATATTGCTTCTTTAAGATTCCAGATTGCTTGCAATTATTAGCCCCTCCCTCGCCCC

Coding sequence (CDS)

ATGGCAAATAACAGCAAGAATGACATTCTTCATCAAGGGAGAAGAGAGCTGATGGTGGAAGTATGGTGGTCGCTATTGGGGGCAGCTATCCCAGCAGTAGTTGCAGGGCAAGCATACAGAATGAGGAGGAGGCATTCTGAGGAGCAGAGAATAAAGACTGCTAGGGGAAGGGAGAAGAATTCGGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCGAAGAGAATGTTGAAGAAGGTAGGGTCTTTCTCGAAAGATCCAATTCCTGATACTTGCGTGACTGTCTGTGGATTATCTGAGCTTGATGCCTGCACAGATGCATGTGCTCGCACTGTTTGTGTGAACCAGCATCAAGTACCAAATTGGAATGACGTTTGTCTTAGGAGATGCCAAAGTGAATGTCTTAAGCTTTCTGCTTCACATTCATCTTAG

Protein sequence

MANNSKNDILHQGRRELMVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRMLKKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKLSASHSS

Homology

[Close]

BLAST of Lsi01G010760 vs. Swiss-Prot
Match: Y5486_ARATH (Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.3e-61
Identity = 106/126 (84.13%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSL+GAA+PA++AGQA+R+++RH EE+RIK+ARGREK+SD+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQV NWND+CLRRCQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 138 SASHSS 144
           S+S SS
Sbjct: 121 SSSSSS 126

[Close]

BLAST of Lsi01G010760 vs. TrEMBL
Match: A0A0A0KJ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486990 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.4e-65
Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSLLGAAIPAVVAGQ Y+M+RRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQVYKMKRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 120

Query: 138 SASHSS 144
           SAS+SS
Sbjct: 121 SASYSS 126

[Close]

BLAST of Lsi01G010760 vs. TrEMBL
Match: A0A0J8C4P0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155120 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.7e-62
Identity = 116/126 (92.06%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSLLGAAIPAVVAGQA+R++RR  EEQRIKTARGREK+SDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAFRIKRRRDEEQRIKTARGREKSSDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDACTDACARTVCVNQH VPNWNDVCLRRCQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHHVPNWNDVCLRRCQSECLKL 120

Query: 138 SASHSS 144
           SAS SS
Sbjct: 121 SASRSS 126

[Close]

BLAST of Lsi01G010760 vs. TrEMBL
Match: A0A0D2SQP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G245000 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-61
Identity = 110/126 (87.30%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MV+ WWSLLGAAIPAV+AGQA+RM+++H+EE+RIK+ARGREK+SDDIFVCERVCTSKRML
Sbjct: 1   MVDAWWSLLGAAIPAVIAGQAFRMKKKHAEEERIKSARGREKSSDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQSECL+L
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQSECLRL 120

Query: 138 SASHSS 144
           SASHSS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Lsi01G010760 vs. TrEMBL
Match: A0A061DJX8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_001262 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-61
Identity = 112/127 (88.19%), Postives = 125/127 (98.43%), Query Frame = 1


Query: 17  LMVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRM 76
           +MVEVWWSLLGAAIPAV+AGQA+RM++R +EEQRIK+ARGREK+SDDIFVCERVCTSKRM
Sbjct: 39  VMVEVWWSLLGAAIPAVIAGQAFRMKKRRAEEQRIKSARGREKSSDDIFVCERVCTSKRM 98

Query: 77  LKKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLK 136
           LKKVG+FSKDPI DTCVTVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQSECL+
Sbjct: 99  LKKVGAFSKDPIRDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQSECLR 158

Query: 137 LSASHSS 144
           LSASHSS
Sbjct: 159 LSASHSS 165

[Close]

BLAST of Lsi01G010760 vs. TrEMBL
Match: A0A0V0H7W4_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-61
Identity = 111/124 (89.52%), Postives = 123/124 (99.19%), Query Frame = 1


Query: 17  LMVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRM 76
           LMVEVWWSLLGAAIPA+VAGQAYR+RR H+EEQRIK+ARGREK++DDIFVCERVCTSKRM
Sbjct: 38  LMVEVWWSLLGAAIPAIVAGQAYRIRRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRM 97

Query: 77  LKKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLK 136
           LKKVG+FSKDPIPDTC+TVCG+SELDAC+DACARTVCVNQHQVPNWNDVCLRRCQSECLK
Sbjct: 98  LKKVGAFSKDPIPDTCITVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQSECLK 157

Query: 137 LSAS 141
           LS++
Sbjct: 158 LSSN 161

[Close]

BLAST of Lsi01G010760 vs. TAIR10
Match: AT5G64816.1 (AT5G64816.1 unknown protein)

HSP 1 Score: 235.0 bits (598), Expect = 3.0e-62
Identity = 106/126 (84.13%), Postives = 123/126 (97.62%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSL+GAA+PA++AGQA+R+++RH EE+RIK+ARGREK+SD+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQV NWND+CLRRCQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLKL 120

Query: 138 SASHSS 144
           S+S SS
Sbjct: 121 SSSSSS 126

[Close]

BLAST of Lsi01G010760 vs. NCBI nr
Match: gi|449448416|ref|XP_004141962.1| (PREDICTED: uncharacterized protein At5g64816 [Cucumis sativus])

HSP 1 Score: 256.9 bits (655), Expect = 2.1e-65
Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSLLGAAIPAVVAGQ Y+M+RRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQVYKMKRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 120

Query: 138 SASHSS 144
           SAS+SS
Sbjct: 121 SASYSS 126

[Close]

BLAST of Lsi01G010760 vs. NCBI nr
Match: gi|659079210|ref|XP_008440134.1| (PREDICTED: uncharacterized protein At5g64816 [Cucumis melo])

HSP 1 Score: 253.1 bits (645), Expect = 3.0e-64
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSLLGAAIPAVVAGQ YRM+RRHSEEQRIK A GREKN DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQVYRMKRRHSEEQRIKIAWGREKNPDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 120

Query: 138 SASHSS 144
           SASHSS
Sbjct: 121 SASHSS 126

[Close]

BLAST of Lsi01G010760 vs. NCBI nr
Match: gi|731344273|ref|XP_010683322.1| (PREDICTED: uncharacterized protein At5g64816 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 245.0 bits (624), Expect = 8.1e-62
Identity = 116/126 (92.06%), Postives = 122/126 (96.83%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSLLGAAIPAVVAGQA+R++RR  EEQRIKTARGREK+SDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAFRIKRRRDEEQRIKTARGREKSSDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDACTDACARTVCVNQH VPNWNDVCLRRCQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHHVPNWNDVCLRRCQSECLKL 120

Query: 138 SASHSS 144
           SAS SS
Sbjct: 121 SASRSS 126

[Close]

BLAST of Lsi01G010760 vs. NCBI nr
Match: gi|697143982|ref|XP_009626114.1| (PREDICTED: uncharacterized protein At5g64816 [Nicotiana tomentosiformis])

HSP 1 Score: 245.0 bits (624), Expect = 8.1e-62
Identity = 114/126 (90.48%), Postives = 124/126 (98.41%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MVEVWWSLLGAAIPA+VAGQAYR+RR H+EEQRIK+ARGREK++DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQAYRIRRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQVPNWNDVCLRRCQSECLKL
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 120

Query: 138 SASHSS 144
           S+S SS
Sbjct: 121 SSSFSS 126

[Close]

BLAST of Lsi01G010760 vs. NCBI nr
Match: gi|823194207|ref|XP_012492275.1| (PREDICTED: uncharacterized protein At5g64816 [Gossypium raimondii])

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-61
Identity = 110/126 (87.30%), Postives = 125/126 (99.21%), Query Frame = 1


Query: 18  MVEVWWSLLGAAIPAVVAGQAYRMRRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 77
           MV+ WWSLLGAAIPAV+AGQA+RM+++H+EE+RIK+ARGREK+SDDIFVCERVCTSKRML
Sbjct: 1   MVDAWWSLLGAAIPAVIAGQAFRMKKKHAEEERIKSARGREKSSDDIFVCERVCTSKRML 60

Query: 78  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLKL 137
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQSECL+L
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQSECLRL 120

Query: 138 SASHSS 144
           SASHSS
Sbjct: 121 SASHSS 126

The following BLAST results are available for this feature:

BLAST of Lsi01G010760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5486_ARATH	5.3e-61	84.13	Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1	[more]

BLAST of Lsi01G010760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ71_CUCSA	1.4e-65	96.83	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486990 PE=4 SV=1	[more]
A0A0J8C4P0_BETVU	5.7e-62	92.06	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155120 PE=4 S...	[more]
A0A0D2SQP1_GOSRA	1.3e-61	87.30	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G245000 PE=4 SV=1	[more]
A0A061DJX8_THECC	2.8e-61	88.19	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_001262 PE=4 SV=1	[more]
A0A0V0H7W4_SOLCH	2.8e-61	89.52	Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1	[more]

BLAST of Lsi01G010760 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64816.1	3.0e-62	84.13	unknown protein	[more]

BLAST of Lsi01G010760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448416\|ref\|XP_004141962.1\|	2.1e-65	96.83	PREDICTED: uncharacterized protein At5g64816 [Cucumis sativus]	[more]
gi\|659079210\|ref\|XP_008440134.1\|	3.0e-64	96.03	PREDICTED: uncharacterized protein At5g64816 [Cucumis melo]	[more]
gi\|731344273\|ref\|XP_010683322.1\|	8.1e-62	92.06	PREDICTED: uncharacterized protein At5g64816 [Beta vulgaris subsp. vulgaris]	[more]
gi\|697143982\|ref\|XP_009626114.1\|	8.1e-62	90.48	PREDICTED: uncharacterized protein At5g64816 [Nicotiana tomentosiformis]	[more]
gi\|823194207\|ref\|XP_012492275.1\|	1.8e-61	87.30	PREDICTED: uncharacterized protein At5g64816 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G010760.1	Lsi01G010760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35548	FAMILY NOT NAMED	coord: 19..143 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G010760	Csa6G486990	Cucumber (Chinese Long) v2	culsiB434
Lsi01G010760	CSPI06G27190	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G010760	Cucsa.101550	Cucumber (Gy14) v1	cgylsiB125
Lsi01G010760	CmaCh03G010440	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G010760	CmoCh03G010430	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G010760	Cla008491	Watermelon (97103) v1	lsiwmB142
Lsi01G010760	MELO3C007474	Melon (DHL92) v3.5.1	lsimeB156
Lsi01G010760	ClCG01G016040	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G010760	MELO3C007474.2	Melon (DHL92) v3.6.1	lsimedB163
Lsi01G010760	Cla97C01G015030	Watermelon (97103) v2	lsiwmbB115
Lsi01G010760	Carg00903	Silver-seed gourd	carlsiB364
Lsi01G010760	CsaV3_6G042320	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G010760	Cucumber (Chinese Long) v3	cuclsiB116
Lsi01G010760	Watermelon (97103) v2	lsiwmbB126
Lsi01G010760	Wax gourd	lsiwgoB162
Lsi01G010760	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G010760	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G010760	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G010760	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G010760	Cucumber (Gy14) v2	cgyblsiB096
Lsi01G010760	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G010760	Melon (DHL92) v3.6.1	lsimedB134
Lsi01G010760	Silver-seed gourd	carlsiB742