CmoCh03G010430 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G010430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Thionin-like protein
Location	Cmo_Chr03 : 7796192 .. 7798292 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTACTCTCTTGCTGTTTCCGGTATTCTCCTAATCTTCATCCTTTTCTTTCTCCTCACTTGATAAACATAAATTTGGATTTGTCGAACGAAAAAATGGAGGATAGGTTTTTCTAGCCGAATATAATTGAAAAACATAAGTATTCTTTCGATTTCTTGCATAAGTCTGATCATCTGTTTATCTCTTTAATCGCTGCTGAAATTGGCTTGTTTATGCGACCAAGAACTTTCCAGCATCTCTCTTCTTCTTTATTTATCAGCGAATCAGTCGTATAATTTAGATATAGTATAGATAGATTGTGTGTATATGTTAGTTGGTTTTTCTTTCTTGTTTTGTTCCCATTTTCCCGTCTTGTTTCTGAATTTGGCTCTTTCTTGCATGCGAAATGTCAAGATTTCTCGTTTGGGTTGTTGTTTGATTACTAAATGGCTGGATTTGTTCGAGCGAGTTAAGCTACTAGCAGACGAGTGTTCTTGTTTAAATTGTTGTTTGGTTGCGAAATGACTAATACTCGTATGTTACAGGTAACAGCAAGAATGATGTTTTCGTTTCTCTTTATATATAACTTACTGCTCCCCGGTCTTTCTGTCTTAAATTTGATCTGAGAACTATGAGAACTATCAATTTTTCAATACTCTTGGCGAAGAAGTATGCCCCTTGTTGTCTTGGTTTGTCTTTCTCATGGGATGAGATCCTTGTAATTTTGTTCCTTGAATTCGTTAACCAACTCCCGACCAGAACTTTTTAAGGTTGTAGATGAGTTTAGTCAGAAAATTGGTAGGATTATCCTATATTATTGTAACGGGCACAAGCCCACCCCTAGCAATATATTATAGATGATTAATATTGGTTGAATGCGTGATTGACCAAGTCTCTGTTCACCCTATTTTGTTCTGTTGGTGCAGCATCAAGGGAGAAGAGAGCTGATGGTGGAAGTATGGTGGTCGATATTGGGGGCAGCTATTCCAGCAGTAGTTGCAGGACAAGCATACAGAATGAGGAGGAGGCATTCTGAGGAGCAGAAAGTAAAGACTGCTAGGGGAAGGGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCAAAGAGAATGTTGAAAAAGGTAGGCTCATTCTCGAAAGACCCAATTCCCGATACTTGCGTGACTGTATGTGGATTATCTGAACTCGATGCCTGCACGGATGCATGTGCTCGCACTGTCTGTGTGAACCAGCATCAAGTACCAAACTGGAACGACATTTGTCTTAGGAGATGCCAGAGTGAATGTCTTAAGCTTTCTGCTTCACATTCATCTTAGTGAATATGGCATGATGTGTGTAAATAATGCGGTCTTTCCATGCATACCCTGTATTGCATTTTGAGTTGTGAAACATTGGCCTATAACTGTTGGCTTTCTGGAAGATGTTATGAAATGTTTTTCTCAATTTACCAAGTTCCTCTTGTTATAATACAGTGTTGCTTCTTTAATAGTGACTTTCCCTCTGAGCCACTGCTTTCTTGCATTCATTATTGGATTTGTTTCATTTATTGACTTTCATTTCTTCAAACGAAGATAGAATCAGATATCTTAATAGATACTCTCCTGAACATTCCTCAAAGATTTCATTGATAAATAGAAAAGCAAATGGACTTCATCCATTCATGCTGCGGTAGTGACTAGAGTAAGGCACAAAATGATCCTTCTCTGTCACAAGAAGCCTATTTATCATATCGTTTTCTGGTTAAGATCTCTATCACAATCTAAATCATAAAGCTTCGAATGCAAATTTCTGATCGAAAAGAAAAGGAAGAGATAGAAAGTTGTTGAGAAGTGGAAGATCTCCTTCGACAGAGAGGGATGATCAAAGCTCAAAGCTCAAAGCTCATCATGAGAATGTTTGTCCTTGTCCTTGTCCTTGTCCTTGTCAACCAGGTTCTCTTTCACCTTGTCCACTGCTTCCTCCATCACTTTTGCTGCAGATCTAGCAGATTCCGAAACTGCATCTTTGCTTGCTCCAAAGCTCTTCTCCACTGCTTCTTTCACTTCATCAACCACACCCTTTGCTTCATCACTACTCCTAAAACTGAAACACACAATCAGAGCTATATAG

mRNA sequence

TTTCTACTCTCTTGCTGTTTCCGGTATTCTCCTAATCTTCATCCTTTTCTTTCTCCTCACTTGATAAACATAAATTTGGATTTGTCGAACGAAAAAATGGAGGATAGGTTTTTCTAGCCGAATATAATTGAAAAACATAAGTATTCTTTCGATTTCTTGCATAAGTCTGATCATCTGTTTATCTCTTTAATCGCTGCTGAAATTGGCTTGTTTATGCGACCAAGAACTTTCCAGCATCTCTCTTCTTCTTTATTTATCAGCGAATCAGTCGTATAATTTAGATATAGTATAGATAGATTGTGTGTATATGTTAGTTGGTTTTTCTTTCTTGTTTTGTTCCCATTTTCCCGTCTTGTTTCTGAATTTGGCTCTTTCTTGCATGCGAAATGTCAAGATTTCTCGTTTGGGTTGTTGTTTGATTACTAAATGGCTGGATTTGTTCGAGCGAGTTAAGCTACTAGCAGACGAGTGTTCTTGTTTAAATTGTTGTTTGGTTGCGAAATGACTAATACTCGTATGTTACAGCATCAAGGGAGAAGAGAGCTGATGGTGGAAGTATGGTGGTCGATATTGGGGGCAGCTATTCCAGCAGTAGTTGCAGGACAAGCATACAGAATGAGGAGGAGGCATTCTGAGGAGCAGAAAGTAAAGACTGCTAGGGGAAGGGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCAAAGAGAATGTTGAAAAAGGTAGGCTCATTCTCGAAAGACCCAATTCCCGATACTTGCGTGACTGTATGTGGATTATCTGAACTCGATGCCTGCACGGATGCATGTGCTCGCACTGTCTGTGTGAACCAGCATCAAGTACCAAACTGGAACGACATTTGTCTTAGGAGATGCCAGAATCTAGCAGATTCCGAAACTGCATCTTTGCTTGCTCCAAAGCTCTTCTCCACTGCTTCTTTCACTTCATCAACCACACCCTTTGCTTCATCACTACTCCTAAAACTGAAACACACAATCAGAGCTATATAG

Coding sequence (CDS)

ATGACTAATACTCGTATGTTACAGCATCAAGGGAGAAGAGAGCTGATGGTGGAAGTATGGTGGTCGATATTGGGGGCAGCTATTCCAGCAGTAGTTGCAGGACAAGCATACAGAATGAGGAGGAGGCATTCTGAGGAGCAGAAAGTAAAGACTGCTAGGGGAAGGGAGAAGAATCCAGATGACATTTTTGTCTGTGAGAGGGTCTGCACATCAAAGAGAATGTTGAAAAAGGTAGGCTCATTCTCGAAAGACCCAATTCCCGATACTTGCGTGACTGTATGTGGATTATCTGAACTCGATGCCTGCACGGATGCATGTGCTCGCACTGTCTGTGTGAACCAGCATCAAGTACCAAACTGGAACGACATTTGTCTTAGGAGATGCCAGAATCTAGCAGATTCCGAAACTGCATCTTTGCTTGCTCCAAAGCTCTTCTCCACTGCTTCTTTCACTTCATCAACCACACCCTTTGCTTCATCACTACTCCTAAAACTGAAACACACAATCAGAGCTATATAG

Homology

[Close]

BLAST of CmoCh03G010430 vs. Swiss-Prot
Match: Y5486_ARATH (Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.2e-54
Identity = 93/115 (80.87%), Postives = 112/115 (97.39%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS++GAA+PA++AGQA+R+++RH EE+++K+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQV NWNDICLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. TrEMBL
Match: A0A0A0KJ71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486990 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.7e-58
Identity = 106/115 (92.17%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPAVVAGQ Y+M+RRHSEEQ++KTARGREKN DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQVYKMKRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. TrEMBL
Match: A0A0V0H7W4_SOLCH (Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.6e-56
Identity = 100/116 (86.21%), Postives = 114/116 (98.28%), Query Frame = 1


Query: 15  LMVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRM 74
           LMVEVWWS+LGAAIPA+VAGQAYR+RR H+EEQ++K+ARGREK+ DDIFVCERVCTSKRM
Sbjct: 38  LMVEVWWSLLGAAIPAIVAGQAYRIRRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRM 97

Query: 75  LKKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           LKKVG+FSKDPIPDTC+TVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 98  LKKVGAFSKDPIPDTCITVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQS 153

[Close]

BLAST of CmoCh03G010430 vs. TrEMBL
Match: M1D319_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031197 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-55
Identity = 99/115 (86.09%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPA+VAGQAYR+RR H+EEQ++K+ARGREK+ DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQAYRIRRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTC+TVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCITVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. TrEMBL
Match: K4BSD0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.8e-55
Identity = 98/115 (85.22%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPA+VAGQAYR++R H+EEQ++K+ARGREK+ DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQAYRIKRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTC+TVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCITVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. TrEMBL
Match: A0A0J8C4P0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155120 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.2e-55
Identity = 100/115 (86.96%), Postives = 111/115 (96.52%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPAVVAGQA+R++RR  EEQ++KTARGREK+ DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQAFRIKRRRDEEQRIKTARGREKSSDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTCVTVCG+SELDACTDACARTVCVNQH VPNWND+CLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACTDACARTVCVNQHHVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. TAIR10
Match: AT5G64816.1 (AT5G64816.1 unknown protein)

HSP 1 Score: 214.2 bits (544), Expect = 6.5e-56
Identity = 93/115 (80.87%), Postives = 112/115 (97.39%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS++GAA+PA++AGQA+R+++RH EE+++K+ARGREK+ D+IFVCERVCTSKRML
Sbjct: 1   MVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQV NWNDICLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. NCBI nr
Match: gi|449448416|ref|XP_004141962.1| (PREDICTED: uncharacterized protein At5g64816 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 3.8e-58
Identity = 106/115 (92.17%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPAVVAGQ Y+M+RRHSEEQ++KTARGREKN DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQVYKMKRRHSEEQRIKTARGREKNSDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. NCBI nr
Match: gi|659079210|ref|XP_008440134.1| (PREDICTED: uncharacterized protein At5g64816 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 8.6e-58
Identity = 106/115 (92.17%), Postives = 112/115 (97.39%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPAVVAGQ YRM+RRHSEEQ++K A GREKNPDDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAVVAGQVYRMKRRHSEEQRIKIAWGREKNPDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. NCBI nr
Match: gi|697143982|ref|XP_009626114.1| (PREDICTED: uncharacterized protein At5g64816 [Nicotiana tomentosiformis])

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55
Identity = 100/115 (86.96%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPA+VAGQAYR+RR H+EEQ++K+ARGREK+ DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQAYRIRRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. NCBI nr
Match: gi|698588059|ref|XP_009779352.1| (PREDICTED: uncharacterized protein At5g64816-like [Nicotiana sylvestris])

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-55
Identity = 100/115 (86.96%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPA+VAGQAYR+RR H+EEQ++K+ARGREK+ DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQAYRIRRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTCVTVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQS 115

[Close]

BLAST of CmoCh03G010430 vs. NCBI nr
Match: gi|970021089|ref|XP_015071801.1| (PREDICTED: uncharacterized protein At5g64816 [Solanum pennellii])

HSP 1 Score: 223.0 bits (567), Expect = 4.0e-55
Identity = 98/115 (85.22%), Postives = 113/115 (98.26%), Query Frame = 1


Query: 16  MVEVWWSILGAAIPAVVAGQAYRMRRRHSEEQKVKTARGREKNPDDIFVCERVCTSKRML 75
           MVEVWWS+LGAAIPA+VAGQAYR++R H+EEQ++K+ARGREK+ DDIFVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQAYRIKRNHAEEQRIKSARGREKSTDDIFVCERVCTSKRML 60

Query: 76  KKVGSFSKDPIPDTCVTVCGLSELDACTDACARTVCVNQHQVPNWNDICLRRCQN 131
           KKVG+FSKDPIPDTC+TVCG+SELDAC+DACARTVCVNQHQVPNWND+CLRRCQ+
Sbjct: 61  KKVGAFSKDPIPDTCITVCGVSELDACSDACARTVCVNQHQVPNWNDVCLRRCQS 115

The following BLAST results are available for this feature:

BLAST of CmoCh03G010430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5486_ARATH	1.2e-54	80.87	Uncharacterized protein At5g64816 OS=Arabidopsis thaliana GN=At5g64816 PE=2 SV=1	[more]

BLAST of CmoCh03G010430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ71_CUCSA	2.7e-58	92.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486990 PE=4 SV=1	[more]
A0A0V0H7W4_SOLCH	5.6e-56	86.21	Putative ovule protein (Fragment) OS=Solanum chacoense PE=4 SV=1	[more]
M1D319_SOLTU	1.2e-55	86.09	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031197 PE=4 SV=1	[more]
K4BSD0_SOLLC	2.8e-55	85.22	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A0J8C4P0_BETVU	6.2e-55	86.96	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155120 PE=4 S...	[more]

BLAST of CmoCh03G010430 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64816.1	6.5e-56	80.87	unknown protein	[more]

BLAST of CmoCh03G010430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448416\|ref\|XP_004141962.1\|	3.8e-58	92.17	PREDICTED: uncharacterized protein At5g64816 [Cucumis sativus]	[more]
gi\|659079210\|ref\|XP_008440134.1\|	8.6e-58	92.17	PREDICTED: uncharacterized protein At5g64816 [Cucumis melo]	[more]
gi\|697143982\|ref\|XP_009626114.1\|	1.4e-55	86.96	PREDICTED: uncharacterized protein At5g64816 [Nicotiana tomentosiformis]	[more]
gi\|698588059\|ref\|XP_009779352.1\|	1.4e-55	86.96	PREDICTED: uncharacterized protein At5g64816-like [Nicotiana sylvestris]	[more]
gi\|970021089\|ref\|XP_015071801.1\|	4.0e-55	85.22	PREDICTED: uncharacterized protein At5g64816 [Solanum pennellii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G010430.1	CmoCh03G010430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35548	FAMILY NOT NAMED	coord: 17..129 score: 1.3
None	No IPR available	PANTHER	PTHR35548:SF1	SUBFAMILY NOT NAMED	coord: 17..129 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G010430	Cucsa.101550	Cucumber (Gy14) v1	cgycmoB0227
CmoCh03G010430	CmaCh03G010440	Cucurbita maxima (Rimu)	cmacmoB653
CmoCh03G010430	Cla008491	Watermelon (97103) v1	cmowmB620
CmoCh03G010430	Csa6G486990	Cucumber (Chinese Long) v2	cmocuB670
CmoCh03G010430	MELO3C007474	Melon (DHL92) v3.5.1	cmomeB605
CmoCh03G010430	ClCG01G016040	Watermelon (Charleston Gray)	cmowcgB575
CmoCh03G010430	CSPI06G27190	Wild cucumber (PI 183967)	cmocpiB681
CmoCh03G010430	Lsi01G010760	Bottle gourd (USVL1VR-Ls)	cmolsiB582
CmoCh03G010430	MELO3C007474.2	Melon (DHL92) v3.6.1	cmomedB694
CmoCh03G010430	CsaV3_6G042320	Cucumber (Chinese Long) v3	cmocucB0793
CmoCh03G010430	Cla97C01G015030	Watermelon (97103) v2	cmowmbB642
CmoCh03G010430	Bhi03G001111	Wax gourd	cmowgoB0794
CmoCh03G010430	Carg00903	Silver-seed gourd	carcmoB0551

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G010430	Cucurbita moschata (Rifu)	cmocmoB431
CmoCh03G010430	Cucurbita moschata (Rifu)	cmocmoB455
CmoCh03G010430	Cucumber (Gy14) v1	cgycmoB0699
CmoCh03G010430	Cucurbita maxima (Rimu)	cmacmoB621
CmoCh03G010430	Cucurbita maxima (Rimu)	cmacmoB858
CmoCh03G010430	Wild cucumber (PI 183967)	cmocpiB653
CmoCh03G010430	Cucumber (Chinese Long) v2	cmocuB641
CmoCh03G010430	Melon (DHL92) v3.5.1	cmomeB579
CmoCh03G010430	Watermelon (Charleston Gray)	cmowcgB579
CmoCh03G010430	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G010430	Cucurbita pepo (Zucchini)	cmocpeB624
CmoCh03G010430	Cucurbita pepo (Zucchini)	cmocpeB636
CmoCh03G010430	Bottle gourd (USVL1VR-Ls)	cmolsiB577
CmoCh03G010430	Cucumber (Gy14) v2	cgybcmoB811
CmoCh03G010430	Melon (DHL92) v3.6.1	cmomedB663
CmoCh03G010430	Silver-seed gourd	carcmoB1095
CmoCh03G010430	Silver-seed gourd	carcmoB1424
CmoCh03G010430	Cucumber (Chinese Long) v3	cmocucB0765
CmoCh03G010430	Watermelon (97103) v2	cmowmbB653
CmoCh03G010430	Wax gourd	cmowgoB0777