Lsi01G010540 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G010540
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGeranylgeranyl-diphosphate synthase
Locationchr01 : 8744940 .. 8746055 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGCTCTGTTAATTTTGCGAATTCATTGATTCAGAGCTCCTCTGTTTTCAACAATTCTCAGAAATTCAAACCCAATTCCTTTTTTGTTCTTCATCCATTAAATTCCCCTTCTTCTCTTTCTTCCAAATCCATTAACAATCCTTCCTCTCGCCGCCCTTTATCGGCGGTGCTAACCAGAGAACAAACCGATCTGCAGTCGGAAGTTGGACAAAATGACCAAAATACCCCCTTCCGTTTCAGAGACTACATGGTACAGAAGGCTAATTTGGTAAATCAAGCTCTCAACGACGCTGTTTCGCTGCGGGACCCACTGAAAATTCACGAGGCCATGCGTTACTCTCTCCTTGCCGGCGGAAAACGGGTCCGCCCAGTGCTCTGTTTAGCTGCATGTGATCTCGTCGGCGGCCCTGAGTCTGCCGCCATACCCGCCGCCTGTTCCATCGAAATGATCCACACCATGTCGCTGATCCACGACGACCTTCCATGCATGGACAACGACGACCTCCGGCGAGGTAAGCCGACAAACCACCGTATCTTCGGCGAGGACGTGGCGGTGCTCGCCGGCGACGCGCTTTTATCTTTCGCCTTCGAGCATATGGCGGCGGCGACGGAGGTGCCGCCGGAGAGAGTGGTGCGTGCAATTGAGGAATTAGCGAAGGCCACCGGAACGGGAGGGTTGGTGGCAGGGCAAGTGGTGGATATAGACTCGGAGGGGGCAAACGACGTCGGATTGGAACTTCTTGAGTTCATCCACGTGCACAAGACGGCGGCACTTCTGGAAGCCGCCGCCGTCATCGGAGCAATCGTGGGCGGCGGTAGCGAGGAGGAGGTGGAAAAGCTGAGGAAATTCTCTCGACACATCGGACTATTGTTCCAAGTGGTGGACGACATTCTGGATGTGACAAAGTCGACGGAGGAATTAGGGAAAACGGCCGGAAAAGATGTGGCGGCGGAGAAAGCGACGTATCCGAAATTAATGGGAATTGAAAAATCGAAAGAATTTGCAGAAAATTTGAGGAAAGAAGCCGTAGAGACGTTGGCCGGATTTGATCCGGTGAAGGCGGAGCCGTTAATTGCATTATCAAATTACATAGCTTATAGGCAAAAATAA

mRNA sequence

ATGAGCTGCTCTGTTAATTTTGCGAATTCATTGATTCAGAGCTCCTCTGTTTTCAACAATTCTCAGAAATTCAAACCCAATTCCTTTTTTGTTCTTCATCCATTAAATTCCCCTTCTTCTCTTTCTTCCAAATCCATTAACAATCCTTCCTCTCGCCGCCCTTTATCGGCGGTGCTAACCAGAGAACAAACCGATCTGCAGTCGGAAGTTGGACAAAATGACCAAAATACCCCCTTCCGTTTCAGAGACTACATGGTACAGAAGGCTAATTTGGTAAATCAAGCTCTCAACGACGCTGTTTCGCTGCGGGACCCACTGAAAATTCACGAGGCCATGCGTTACTCTCTCCTTGCCGGCGGAAAACGGGTCCGCCCAGTGCTCTGTTTAGCTGCATGTGATCTCGTCGGCGGCCCTGAGTCTGCCGCCATACCCGCCGCCTGTTCCATCGAAATGATCCACACCATGTCGCTGATCCACGACGACCTTCCATGCATGGACAACGACGACCTCCGGCGAGGTAAGCCGACAAACCACCGTATCTTCGGCGAGGACGTGGCGGTGCTCGCCGGCGACGCGCTTTTATCTTTCGCCTTCGAGCATATGGCGGCGGCGACGGAGGTGCCGCCGGAGAGAGTGGTGCGTGCAATTGAGGAATTAGCGAAGGCCACCGGAACGGGAGGGTTGGTGGCAGGGCAAGTGGTGGATATAGACTCGGAGGGGGCAAACGACGTCGGATTGGAACTTCTTGAGTTCATCCACGTGCACAAGACGGCGGCACTTCTGGAAGCCGCCGCCGTCATCGGAGCAATCGTGGGCGGCGGTAGCGAGGAGGAGGTGGAAAAGCTGAGGAAATTCTCTCGACACATCGGACTATTGTTCCAAGTGGTGGACGACATTCTGGATGTGACAAAGTCGACGGAGGAATTAGGGAAAACGGCCGGAAAAGATGTGGCGGCGGAGAAAGCGACGTATCCGAAATTAATGGGAATTGAAAAATCGAAAGAATTTGCAGAAAATTTGAGGAAAGAAGCCGTAGAGACGTTGGCCGGATTTGATCCGGTGAAGGCGGAGCCGTTAATTGCATTATCAAATTACATAGCTTATAGGCAAAAATAA

Coding sequence (CDS)

ATGAGCTGCTCTGTTAATTTTGCGAATTCATTGATTCAGAGCTCCTCTGTTTTCAACAATTCTCAGAAATTCAAACCCAATTCCTTTTTTGTTCTTCATCCATTAAATTCCCCTTCTTCTCTTTCTTCCAAATCCATTAACAATCCTTCCTCTCGCCGCCCTTTATCGGCGGTGCTAACCAGAGAACAAACCGATCTGCAGTCGGAAGTTGGACAAAATGACCAAAATACCCCCTTCCGTTTCAGAGACTACATGGTACAGAAGGCTAATTTGGTAAATCAAGCTCTCAACGACGCTGTTTCGCTGCGGGACCCACTGAAAATTCACGAGGCCATGCGTTACTCTCTCCTTGCCGGCGGAAAACGGGTCCGCCCAGTGCTCTGTTTAGCTGCATGTGATCTCGTCGGCGGCCCTGAGTCTGCCGCCATACCCGCCGCCTGTTCCATCGAAATGATCCACACCATGTCGCTGATCCACGACGACCTTCCATGCATGGACAACGACGACCTCCGGCGAGGTAAGCCGACAAACCACCGTATCTTCGGCGAGGACGTGGCGGTGCTCGCCGGCGACGCGCTTTTATCTTTCGCCTTCGAGCATATGGCGGCGGCGACGGAGGTGCCGCCGGAGAGAGTGGTGCGTGCAATTGAGGAATTAGCGAAGGCCACCGGAACGGGAGGGTTGGTGGCAGGGCAAGTGGTGGATATAGACTCGGAGGGGGCAAACGACGTCGGATTGGAACTTCTTGAGTTCATCCACGTGCACAAGACGGCGGCACTTCTGGAAGCCGCCGCCGTCATCGGAGCAATCGTGGGCGGCGGTAGCGAGGAGGAGGTGGAAAAGCTGAGGAAATTCTCTCGACACATCGGACTATTGTTCCAAGTGGTGGACGACATTCTGGATGTGACAAAGTCGACGGAGGAATTAGGGAAAACGGCCGGAAAAGATGTGGCGGCGGAGAAAGCGACGTATCCGAAATTAATGGGAATTGAAAAATCGAAAGAATTTGCAGAAAATTTGAGGAAAGAAGCCGTAGAGACGTTGGCCGGATTTGATCCGGTGAAGGCGGAGCCGTTAATTGCATTATCAAATTACATAGCTTATAGGCAAAAATAA

Protein sequence

MSCSVNFANSLIQSSSVFNNSQKFKPNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAATEVPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYRQK
Homology
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BLAST of Lsi01G010540 vs. Swiss-Prot
Match: GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-126
Identity = 242/341 (70.97%), Postives = 280/341 (82.11%), Query Frame = 1 

Query: 35  LNSPSSLSSKSINNPSSRRPLSAVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQ 94
           L  P S  SK   + SS    S+V+T+E    QSE         F F  Y++ KA LVN+
Sbjct: 36  LTKPISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSS------FDFMSYIITKAELVNK 95

Query: 95  ALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHT 154
           AL+ AV LR+PLKIHEAMRYSLLAGGKRVRPVLC+AAC+LVGG ES A+PAAC++EMIHT
Sbjct: 96  ALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHT 155

Query: 155 MSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAATE---VPPER 214
           MSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALLSFAFEH+A+AT    V P R
Sbjct: 156 MSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVR 215

Query: 215 VVRAIEELAKATGTGGLVAGQVVDIDSEG--ANDVGLELLEFIHVHKTAALLEAAAVIGA 274
           VVRA+ ELAKA GT GLVAGQVVDI SEG   NDVGLE LEFIH+HKTAALLEA+AV+GA
Sbjct: 216 VVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGA 275

Query: 275 IVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMG 334
           IVGGGS++E+E+LRKF+R IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K TYPK+MG
Sbjct: 276 IVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMG 335

Query: 335 IEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYRQ 371
           +EKS+EFAE L +EA + L GFD  K  PL+AL+NYIAYRQ
Sbjct: 336 LEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370

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BLAST of Lsi01G010540 vs. Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.1e-126
Identity = 245/371 (66.04%), Postives = 294/371 (79.25%), Query Frame = 1 

Query: 4   SVNFANSLIQSSSVFNNSQKFKPNSFFVLHPLNSPSSLSSKSINNPSSRRPLS---AVLT 63
           SVN   S + +S V N + + +  S     P N   SL+  S     S RP+S   A++T
Sbjct: 3   SVNLG-SWVHTSYVLNQATRSRSKSKSFSLPFNPLKSLAI-SFAYRKSERPISSVSAIIT 62

Query: 64  REQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGG 123
           +E+  LQ E  QN+    F F+ YM+QK N +NQAL  A+ L++P KIHE+MRYSLLAGG
Sbjct: 63  KEEETLQEE--QNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGG 122

Query: 124 KRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRI 183
           KRVRP LCLAAC+LVGG +S A+PAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH +
Sbjct: 123 KRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIV 182

Query: 184 FGEDVAVLAGDALLSFAFEHMAAAT-EVPPERVVRAIEELAKATGTGGLVAGQVVDIDSE 243
           FGEDVAVLAGDALL+FAFEH+A +T  V   R+VRA+ ELAKA G  GLVAGQVVDI+SE
Sbjct: 183 FGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSE 242

Query: 244 GANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDI 303
           G+++V LE LEFIH+HKTA LLE A V+GAI+GGG++EEVEKLRK++R IGLLFQVVDDI
Sbjct: 243 GSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDI 302

Query: 304 LDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPL 363
           LDVTKS++ELGKTAGKD+ A+K TYPKL+GIEKS+EFAE L KEA E LAGFDP KA PL
Sbjct: 303 LDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPL 362

Query: 364 IALSNYIAYRQ 371
           IAL+NYIA+RQ
Sbjct: 363 IALANYIAHRQ 369

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BLAST of Lsi01G010540 vs. Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.0e-124
Identity = 233/349 (66.76%), Postives = 284/349 (81.38%), Query Frame = 1 

Query: 33  HPLNSPSSLS---SKSINNP---SSRRPLSAVLTREQTDLQSEVGQNDQ-----NTPFRF 92
           HPL +   +S   S +I  P    SR  +SA++T+EQT  +SE     +     ++ F F
Sbjct: 7   HPLKNQLPISFFLSGTIRKPIFSCSRLSISAIITKEQTQEESESKSKKEVAFSSSSSFDF 66

Query: 93  RDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESA 152
           + YM+ KAN VN+AL DAV +R+PLKIHE+MRYSLLAGGKRVRP+LC+AAC+L GG ES 
Sbjct: 67  KAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESV 126

Query: 153 AIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALLSFAFEHM 212
           A+P+AC++EMIHTMSL+HDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALL+FAFEH+
Sbjct: 127 AMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHI 186

Query: 213 AAATE-VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGANDVGLELLEFIHVHKTAAL 272
           A AT+ V  ER+VR + ELAK  G+ GLVAGQVVD+ SEG  DVGLE LEFIH+HKTAAL
Sbjct: 187 ATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAAL 246

Query: 273 LEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELGKTAGKDVAAE 332
           LE + V+GAIVGG ++E++ KLRKF+R IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+
Sbjct: 247 LEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVAD 306

Query: 333 KATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYR 370
           K TYPKL+GI+KS+EFAE L +EA E LA FDP KA PLIAL+NYIAYR
Sbjct: 307 KVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYR 355

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BLAST of Lsi01G010540 vs. Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 5.1e-124
Identity = 237/360 (65.83%), Postives = 291/360 (80.83%), Query Frame = 1 

Query: 15  SSVFNNSQKFKPNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTDLQSEVGQND 74
           S++   S+   P S   L P+   S    +++++ SS    S+++T+E  +L+S      
Sbjct: 19  STILTQSRSRSPPSLITLKPI---SLTPKRTVSSSSS----SSLITKEDNNLKSS----- 78

Query: 75  QNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDL 134
            ++ F F  Y+++KA+ VN+AL+ AV LR+PLKIHEAMRYSLLAGGKRVRPVLC+AAC+L
Sbjct: 79  -SSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACEL 138

Query: 135 VGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALL 194
           VGG ES A+PA C++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH+++GEDVAVLAGDALL
Sbjct: 139 VGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALL 198

Query: 195 SFAFEHMAAAT--EVPPERVVRAIEELAKATGTGGLVAGQVVDIDSEG--ANDVGLELLE 254
           SFAFEH+A+AT  EV P RVVRA+ ELAKA GT GLVAGQVVDI SEG   N+VGLE L+
Sbjct: 199 SFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLK 258

Query: 255 FIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELG 314
           FIH+HKTAALLEA+AV+G I+GGGS+EE+E+LRKF+R IGLLFQVVDDILDVTKS++ELG
Sbjct: 259 FIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELG 318

Query: 315 KTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYRQ 371
           KTAGKD+ A+K TYPKLMG+EKS+EFAE L  EA + L GFD  K  PL+AL+NYIA RQ
Sbjct: 319 KTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQ 365

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BLAST of Lsi01G010540 vs. Swiss-Prot
Match: GGPP7_ARATH (Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1)

HSP 1 Score: 443.0 bits (1138), Expect = 3.3e-123
Identity = 231/321 (71.96%), Postives = 268/321 (83.49%), Query Frame = 1 

Query: 52  RRPLSAVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEA 111
           RR LS VL+    D      +   +  F F  YM+ KAN VN+AL+ AVSLR+P+KIHEA
Sbjct: 32  RRKLSTVLSVTARD------EGIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEA 91

Query: 112 MRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLR 171
           +RYSLLA GKRVRPVLC+AAC+LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLR
Sbjct: 92  IRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLR 151

Query: 172 RGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAATEVPPERVVRAIEELAKATGTGGLVAG 231
           RGKPTNH++FGEDVAVLAGDAL+SFAFEH+A +T V P RVVRAI ELAKA G+ GLVAG
Sbjct: 152 RGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSPARVVRAIGELAKAIGSKGLVAG 211

Query: 232 QVVDIDSEG--ANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHI 291
           QVVD+ S G   NDVGLE+LEFIHVHKTA LLEAA V+GAIVGGGS+EEVEKLR+F+R I
Sbjct: 212 QVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCI 271

Query: 292 GLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLA 351
           GLLFQVVDDILDVTKS+EELGKTAGKD+ A+K TYPKLMG+EKSK+FA+ L  +A E L 
Sbjct: 272 GLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLH 331

Query: 352 GFDPVKAEPLIALSNYIAYRQ 371
           GFD  + +PL+AL+NYIA RQ
Sbjct: 332 GFDSSRVKPLLALANYIAKRQ 346

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BLAST of Lsi01G010540 vs. TrEMBL
Match: A0A0A0KFZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487640 PE=3 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 7.8e-172
Identity = 324/375 (86.40%), Postives = 344/375 (91.73%), Query Frame = 1 

Query: 1   MSCSVNFANSLIQSSSVFNNSQKFKPNSFFVLHPLNSPSSL--SSKSINNPSSRRPLSAV 60
           MS S+NF N LIQSSSVF NS KFK N FF+LHPL SP SL  SSKS  N SSRRP+SA 
Sbjct: 1   MSSSLNFTNPLIQSSSVFTNSHKFKSNPFFLLHPLTSPISLLISSKSTKNSSSRRPISAA 60

Query: 61  LTREQTDLQSEVGQND-QNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLL 120
           LT EQT+L  ++ QND QN PFRFRDYM+QK+NLVNQAL++AVSL+DPLKIHEAMRYSLL
Sbjct: 61  LTTEQTELHPQLEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLL 120

Query: 121 AGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180
           AGGKRVRPVLCLAACDLVGG ESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 121 AGGKRVRPVLCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HRIFGEDVAVLAGDALLSFAFEHMAAA-TEVPPERVVRAIEELAKATGTGGLVAGQVVDI 240
           HR+FGEDVAVLAGDALLSFAFEHMAA   EV PERVVRAI ELAKATGTGGLVAGQVVDI
Sbjct: 181 HRMFGEDVAVLAGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDI 240

Query: 241 DSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVV 300
           DSEGA+DVGLELLE+IHVHKTAALLEAAAV+GAIVGGGSEEE+EKLR F+R IGLLFQVV
Sbjct: 241 DSEGADDVGLELLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVV 300

Query: 301 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKA 360
           DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAE LR+EA+E LAGFDPVKA
Sbjct: 301 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKA 360

Query: 361 EPLIALSNYIAYRQK 372
           EPLIALSNYIAYRQ+
Sbjct: 361 EPLIALSNYIAYRQR 375

[Close]
BLAST of Lsi01G010540 vs. TrEMBL
Match: A0A061DHH0_THECC (Geranylgeranyl pyrophosphate synthase 1 OS=Theobroma cacao GN=TCM_000455 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 3.0e-131
Identity = 255/366 (69.67%), Postives = 303/366 (82.79%), Query Frame = 1 

Query: 10  SLIQSSSVFNNSQKFK----PNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTD 69
           S +QS S+FN + + K    P SF   +PL + SS + K   + +S   +SAVLT+E T 
Sbjct: 8   SWVQSYSIFNQASRSKSIPLPRSF-PFNPLKNLSSSTPKK-RSLTSLPSISAVLTKEDTI 67

Query: 70  LQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRP 129
            + E  Q+ Q   F F+ YMVQKA+ VNQAL+ AVSLRDP+KIHEAMRYSLLAGGKRVRP
Sbjct: 68  KEEE--QDPQKPSFDFKSYMVQKASTVNQALDSAVSLRDPVKIHEAMRYSLLAGGKRVRP 127

Query: 130 VLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDV 189
            LCLAAC+LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+
Sbjct: 128 ALCLAACELVGGQESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDI 187

Query: 190 AVLAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGANDV 249
           AVLAGDALL+FAFEH+A +T  V P RVV+A+ ELAKA GT GLVAGQVVDI+SEG  DV
Sbjct: 188 AVLAGDALLAFAFEHIAVSTVGVTPGRVVKAVGELAKAIGTEGLVAGQVVDINSEGLIDV 247

Query: 250 GLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTK 309
           GL+ LEFIHVHKTA LLEAA V+GAI+GGG +E+VEKLRKF+R+IGLLFQVVDDILDVTK
Sbjct: 248 GLDHLEFIHVHKTAVLLEAAVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILDVTK 307

Query: 310 STEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSN 369
           S+++LGKTAGKD+ A+K TYPKLMGIEKS+EFAE L+ +A+E L GFDP KA PL+AL+N
Sbjct: 308 SSKDLGKTAGKDLVADKVTYPKLMGIEKSREFAEKLKSDALELLQGFDPEKAAPLVALAN 367

Query: 370 YIAYRQ 371
           YIAYRQ
Sbjct: 368 YIAYRQ 369

[Close]
BLAST of Lsi01G010540 vs. TrEMBL
Match: D6BCR2_CORAV (Geranylgeranyl diphosphate synthase OS=Corylus avellana GN=GGPPS PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 5.1e-131
Identity = 257/375 (68.53%), Postives = 305/375 (81.33%), Query Frame = 1 

Query: 1   MSCSVNFANSLIQSSSVFNN---SQKFKPNSFFVLHPL-NSPSSLSSKSINNPSSRRPLS 60
           MSC VN + + +Q+ S+FN    S+     SF +LHPL N P S          S   +S
Sbjct: 1   MSC-VNLS-TWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISSVSVS 60

Query: 61  AVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSL 120
           AVLT+E T  + E  +++  T F F+ YM+QKAN VNQAL+ AVSL+DP KIHEAMRYSL
Sbjct: 61  AVLTKEDTLREEEESESEART-FNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSL 120

Query: 121 LAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPT 180
           LAGGKRVRP+LC+AAC+LVGG ES A+PAACS+EMIHTMSLIHDDLPCMDNDDLRRGKPT
Sbjct: 121 LAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPT 180

Query: 181 NHRIFGEDVAVLAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVD 240
           NH++FGEDVAVLAGDALL+F+FEH+A +TE VPP R++RAI ELA++ G  GLVAGQVVD
Sbjct: 181 NHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVD 240

Query: 241 IDSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQV 300
           I SEG +DVGLE LEFIH+HKTAALLE A V+GAI+GGGS EEVEKLR F+R+IGLLFQV
Sbjct: 241 ICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQV 300

Query: 301 VDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVK 360
           VDDILDVTKS++ELGKTAGKD+ A+K TYPKLMG+EKS+EFAE L K+A + LAGFD  K
Sbjct: 301 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEK 360

Query: 361 AEPLIALSNYIAYRQ 371
           A PLIAL+NYIA+RQ
Sbjct: 361 AAPLIALANYIAHRQ 372

[Close]
BLAST of Lsi01G010540 vs. TrEMBL
Match: A0A0D2SNN1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G206700 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 6.7e-131
Identity = 257/364 (70.60%), Postives = 297/364 (81.59%), Query Frame = 1 

Query: 12  IQSSSVFNN----SQKFKPNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTDLQ 71
           +QS S+ N     S+ F        +PL + SS + K +N  SS   +++VLT+E  D+ 
Sbjct: 10  VQSYSMPNQVSSISKSFPLPRSLPFNPLTTQSSSTLKKVNF-SSLPSITSVLTKE--DIV 69

Query: 72  SEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVL 131
            E  Q+ Q + F F  YM+QKA+ VNQAL  AVSLRDP+KIHEAMRYSLLAGGKRVRPVL
Sbjct: 70  KEEEQDPQKSSFDFNSYMLQKASAVNQALESAVSLRDPVKIHEAMRYSLLAGGKRVRPVL 129

Query: 132 CLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAV 191
           CLAAC LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+AV
Sbjct: 130 CLAACALVGGRESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDIAV 189

Query: 192 LAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGANDVGL 251
           LAGDALL+FAFEH+A +T  VPP R+VRAI ELAKA G  GLVAGQVVDI SEG  DVGL
Sbjct: 190 LAGDALLAFAFEHIAVSTVGVPPSRIVRAIGELAKAIGGEGLVAGQVVDIISEGLTDVGL 249

Query: 252 ELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKST 311
           + LEFIHVHKTAALLEAA V+GAIVGGG +EEVEKLRKF+R IGLLFQVVDDILDVTKS+
Sbjct: 250 DHLEFIHVHKTAALLEAAVVLGAIVGGGCDEEVEKLRKFARCIGLLFQVVDDILDVTKSS 309

Query: 312 EELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYI 371
           +ELGKTAGKD+ A+K TYPKLMGI+KSKEFAE L+ +A+E L GFDP KA PLIAL+NYI
Sbjct: 310 KELGKTAGKDLVADKVTYPKLMGIQKSKEFAEKLKTDAIELLQGFDPAKAAPLIALANYI 369

[Close]
BLAST of Lsi01G010540 vs. TrEMBL
Match: A0A0G2QS78_MALDO (Geranylgeranyl diphosphate synthase OS=Malus domestica GN=GGPPS-1 PE=2 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 3.3e-130
Identity = 249/374 (66.58%), Postives = 306/374 (81.82%), Query Frame = 1 

Query: 1   MSCSVNFANSLIQSSSVFNNSQKFKPN-SFFVLHPLNS--PSSLSSKSINNPSSRRPLSA 60
           MSC    +    Q+ S+ N + + + + SF +LHPL +  P+S ++     P+S   +SA
Sbjct: 1   MSCMNLSSWVQFQTCSMLNQAGRSRSSQSFHLLHPLKTTIPTSSAAPHRRRPTSPFAVSA 60

Query: 61  VLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLL 120
           VLT+++T L  E  +  +   F F+ YM+Q+A  VNQAL+ AVSLRDP+ IHEAMRYSLL
Sbjct: 61  VLTKQET-LTEEFDEESRKPTFNFKSYMLQRAESVNQALDAAVSLRDPITIHEAMRYSLL 120

Query: 121 AGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180
           AGGKRVRPVLCLAAC+LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 121 AGGKRVRPVLCLAACELVGGSESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HRIFGEDVAVLAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVDI 240
           H++FGEDVAVLAGDALL+FAFEH++ +T  V P R+VRA+ ELAK+ G+ GLVAGQVVDI
Sbjct: 181 HKVFGEDVAVLAGDALLAFAFEHISLSTVGVSPARIVRAVGELAKSIGSEGLVAGQVVDI 240

Query: 241 DSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVV 300
           DSEG +DVGLE LE+IH+HKTAALLE + V+G+I+GGGS+ E+EKLR F+R+IGLLFQVV
Sbjct: 241 DSEGLSDVGLEQLEYIHLHKTAALLECSVVLGSILGGGSDSEIEKLRTFARYIGLLFQVV 300

Query: 301 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKA 360
           DDILDVTKS++ELGKTAGKD+ A+K TYPKL+GIEKS+EFAE L K+A E LAGFDP KA
Sbjct: 301 DDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKDAKEQLAGFDPEKA 360

Query: 361 EPLIALSNYIAYRQ 371
            PLIAL+NYIAYRQ
Sbjct: 361 APLIALANYIAYRQ 373

[Close]
BLAST of Lsi01G010540 vs. TAIR10
Match: AT4G36810.1 (AT4G36810.1 geranylgeranyl pyrophosphate synthase 1)

HSP 1 Score: 454.5 bits (1168), Expect = 6.2e-128
Identity = 242/341 (70.97%), Postives = 280/341 (82.11%), Query Frame = 1 

Query: 35  LNSPSSLSSKSINNPSSRRPLSAVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQ 94
           L  P S  SK   + SS    S+V+T+E    QSE         F F  Y++ KA LVN+
Sbjct: 36  LTKPISFRSKRTVSSSSSIVSSSVVTKEDNLRQSEPSS------FDFMSYIITKAELVNK 95

Query: 95  ALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHT 154
           AL+ AV LR+PLKIHEAMRYSLLAGGKRVRPVLC+AAC+LVGG ES A+PAAC++EMIHT
Sbjct: 96  ALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHT 155

Query: 155 MSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAATE---VPPER 214
           MSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALLSFAFEH+A+AT    V P R
Sbjct: 156 MSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVR 215

Query: 215 VVRAIEELAKATGTGGLVAGQVVDIDSEG--ANDVGLELLEFIHVHKTAALLEAAAVIGA 274
           VVRA+ ELAKA GT GLVAGQVVDI SEG   NDVGLE LEFIH+HKTAALLEA+AV+GA
Sbjct: 216 VVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGA 275

Query: 275 IVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMG 334
           IVGGGS++E+E+LRKF+R IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K TYPK+MG
Sbjct: 276 IVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMG 335

Query: 335 IEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYRQ 371
           +EKS+EFAE L +EA + L GFD  K  PL+AL+NYIAYRQ
Sbjct: 336 LEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370

[Close]
BLAST of Lsi01G010540 vs. TAIR10
Match: AT2G18620.1 (AT2G18620.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 443.0 bits (1138), Expect = 1.9e-124
Identity = 231/321 (71.96%), Postives = 268/321 (83.49%), Query Frame = 1 

Query: 52  RRPLSAVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEA 111
           RR LS VL+    D      +   +  F F  YM+ KAN VN+AL+ AVSLR+P+KIHEA
Sbjct: 32  RRKLSTVLSVTARD------EGIIHNHFDFTSYMIGKANAVNEALDSAVSLREPIKIHEA 91

Query: 112 MRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLR 171
           +RYSLLA GKRVRPVLC+AAC+LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLR
Sbjct: 92  IRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLR 151

Query: 172 RGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAATEVPPERVVRAIEELAKATGTGGLVAG 231
           RGKPTNH++FGEDVAVLAGDAL+SFAFEH+A +T V P RVVRAI ELAKA G+ GLVAG
Sbjct: 152 RGKPTNHKVFGEDVAVLAGDALISFAFEHLATSTAVSPARVVRAIGELAKAIGSKGLVAG 211

Query: 232 QVVDIDSEG--ANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHI 291
           QVVD+ S G   NDVGLE+LEFIHVHKTA LLEAA V+GAIVGGGS+EEVEKLR+F+R I
Sbjct: 212 QVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCI 271

Query: 292 GLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLA 351
           GLLFQVVDDILDVTKS+EELGKTAGKD+ A+K TYPKLMG+EKSK+FA+ L  +A E L 
Sbjct: 272 GLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLH 331

Query: 352 GFDPVKAEPLIALSNYIAYRQ 371
           GFD  + +PL+AL+NYIA RQ
Sbjct: 332 GFDSSRVKPLLALANYIAKRQ 346

[Close]
BLAST of Lsi01G010540 vs. TAIR10
Match: AT3G14550.1 (AT3G14550.1 geranylgeranyl pyrophosphate synthase 3)

HSP 1 Score: 414.5 bits (1064), Expect = 7.1e-116
Identity = 221/348 (63.51%), Postives = 275/348 (79.02%), Query Frame = 1 

Query: 28  SFFVLHPLNSPSSLSS-KSINNPSSRRPLSAVLTREQTDLQSEVGQ-NDQNTPFRFRDYM 87
           S F+       +S+SS KS+   +   P SA+ ++   D+    G+ ND N+ F F+ YM
Sbjct: 11  SLFIQSRGRRDNSISSVKSLKKRTGLSPSSALTSQGGRDMIPPEGKCNDHNSAFDFKLYM 70

Query: 88  VQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPA 147
           ++KA  VN AL+ +V LR+PL + EA+RYSLLAGGKRVRP+LC+A C+LVGG E+ A+ A
Sbjct: 71  IRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSA 130

Query: 148 ACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAAT 207
           AC++EMIHT SLIHDDLPCMDN DLRRGKPTNH+++GED+AVLAGDALL+ AFEHM   +
Sbjct: 131 ACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFVS 190

Query: 208 E--VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGAN--DVGLELLEFIHVHKTAALL 267
              V PER++RA+ ELA+A GT GLVAGQ++D+ SE  N   VGLE LEFIH+HKTAALL
Sbjct: 191 SGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAALL 250

Query: 268 EAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEK 327
           EAAAV+G I+GGG+EEE+EKLRK++R IGLLFQVVDDILDVTKSTEELGKTAGKDV A K
Sbjct: 251 EAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGK 310

Query: 328 ATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYR 370
            TYP+L+G+E+SKE AE LR+EA E L GFDP KA PL+AL++YIA R
Sbjct: 311 LTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACR 358

[Close]
BLAST of Lsi01G010540 vs. TAIR10
Match: AT3G29430.1 (AT3G29430.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 412.9 bits (1060), Expect = 2.1e-115
Identity = 220/335 (65.67%), Postives = 269/335 (80.30%), Query Frame = 1 

Query: 42  SSKSINNPSSRR--PLSAVLTREQTDLQSEVGQ-NDQNTPFRFRDYMVQKANLVNQALND 101
           S  S NN   R    LS  L+ +  D+    G+ ND+N+ F F+ YM++KA  V+ ALN 
Sbjct: 21  SLSSFNNLQKRTVLSLSCALSSQGGDMIPPEGKSNDRNSAFDFKSYMIRKAESVSAALNV 80

Query: 102 AVSLRDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLI 161
           +V L++PL I EA+RYSLLAGGKRVRP+LC+AAC+LVGG E+ A+ AAC++EMIHT SLI
Sbjct: 81  SVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMSAACAVEMIHTSSLI 140

Query: 162 HDDLPCMDNDDLRRGKPTNHRIFGEDVAVLAGDALLSFAFEHMAAATE--VPPERVVRAI 221
           HDDLPCMD+ DLRRGKPTNH+ FGED+AVLAGDALL+ AFEHM   +   V PER++RA+
Sbjct: 141 HDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAV 200

Query: 222 EELAKATGTGGLVAGQVVDIDSEGAN--DVGLELLEFIHVHKTAALLEAAAVIGAIVGGG 281
            ELAKA GT GLVAGQV D+ S+G N  DVGLE LEFIH+HKTAALLEAAAV+GAI+GGG
Sbjct: 201 MELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAALLEAAAVLGAIMGGG 260

Query: 282 SEEEVEKLRKFSRHIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSK 341
           +EEE+EKLRK++R IGLLFQVVDDILDVT+ST+ELGKTAGKDV A K TYP+L+G+E+S+
Sbjct: 261 TEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLERSR 320

Query: 342 EFAENLRKEAVETLAGFDPVKAEPLIALSNYIAYR 370
           E AE LR+EA E L GFD  KA PL+AL++YIA R
Sbjct: 321 EVAEKLRREAAEQLLGFDSDKAAPLVALASYIACR 355

[Close]
BLAST of Lsi01G010540 vs. TAIR10
Match: AT3G14530.1 (AT3G14530.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 411.0 bits (1055), Expect = 7.8e-115
Identity = 223/364 (61.26%), Postives = 281/364 (77.20%), Query Frame = 1 

Query: 12  IQSSSVFNNSQKFKPNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTD--LQSE 71
           + SSS+F+ S+  + NS      ++S  SL  +++ +      LS+ LT +     +Q E
Sbjct: 7   LSSSSLFSQSRGRRDNS------ISSVKSLRKRTVLS------LSSALTSQDAGHMIQPE 66

Query: 72  VGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVLCL 131
              ND N+ F F+ YM++KA  VN AL+ +V L  PL I EA+RYSLLAGGKRVRP+LC+
Sbjct: 67  GKSNDNNSAFDFKLYMIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCI 126

Query: 132 AACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAVLA 191
           AAC+LVGG E+ A+ AAC++EMIHT SLIHDDLPCMDN DLRRGKPTNH+++GED+AVLA
Sbjct: 127 AACELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLA 186

Query: 192 GDALLSFAFEHMAAATE--VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGAN--DVG 251
           GDALL+ AFEHM   +   V PE+++RA+ ELA+A GT GLVAGQ++D+ SE  N   VG
Sbjct: 187 GDALLALAFEHMTVVSSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVG 246

Query: 252 LELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKS 311
           LE LEFIH+HKTAALLEAAAV+G I+GGG+E+E+EKLRK++R IGLLFQVVDDILDVTKS
Sbjct: 247 LEHLEFIHLHKTAALLEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKS 306

Query: 312 TEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNY 370
           TEELGKTAGKDV A K TYP+L+G+E S+E AE LR+EA E L GFDP KA PL+AL++Y
Sbjct: 307 TEELGKTAGKDVMAGKLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASY 358

[Close]
BLAST of Lsi01G010540 vs. NCBI nr
Match: gi|449448558|ref|XP_004142033.1| (PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic [Cucumis sativus])

HSP 1 Score: 611.3 bits (1575), Expect = 1.1e-171
Identity = 324/375 (86.40%), Postives = 344/375 (91.73%), Query Frame = 1 

Query: 1   MSCSVNFANSLIQSSSVFNNSQKFKPNSFFVLHPLNSPSSL--SSKSINNPSSRRPLSAV 60
           MS S+NF N LIQSSSVF NS KFK N FF+LHPL SP SL  SSKS  N SSRRP+SA 
Sbjct: 1   MSSSLNFTNPLIQSSSVFTNSHKFKSNPFFLLHPLTSPISLLISSKSTKNSSSRRPISAA 60

Query: 61  LTREQTDLQSEVGQND-QNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLL 120
           LT EQT+L  ++ QND QN PFRFRDYM+QK+NLVNQAL++AVSL+DPLKIHEAMRYSLL
Sbjct: 61  LTTEQTELHPQLEQNDVQNPPFRFRDYMIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLL 120

Query: 121 AGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180
           AGGKRVRPVLCLAACDLVGG ESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 121 AGGKRVRPVLCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HRIFGEDVAVLAGDALLSFAFEHMAAA-TEVPPERVVRAIEELAKATGTGGLVAGQVVDI 240
           HR+FGEDVAVLAGDALLSFAFEHMAA   EV PERVVRAI ELAKATGTGGLVAGQVVDI
Sbjct: 181 HRMFGEDVAVLAGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDI 240

Query: 241 DSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVV 300
           DSEGA+DVGLELLE+IHVHKTAALLEAAAV+GAIVGGGSEEE+EKLR F+R IGLLFQVV
Sbjct: 241 DSEGADDVGLELLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVV 300

Query: 301 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKA 360
           DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAE LR+EA+E LAGFDPVKA
Sbjct: 301 DDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKA 360

Query: 361 EPLIALSNYIAYRQK 372
           EPLIALSNYIAYRQ+
Sbjct: 361 EPLIALSNYIAYRQR 375

[Close]
BLAST of Lsi01G010540 vs. NCBI nr
Match: gi|659079248|ref|XP_008440155.1| (PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Cucumis melo])

HSP 1 Score: 609.0 bits (1569), Expect = 5.6e-171
Identity = 327/377 (86.74%), Postives = 342/377 (90.72%), Query Frame = 1 

Query: 1   MSCSVNFANSLIQSSSVFNNSQKFKPNSFFVLHPLNSPSSL--SSKSINNPSSRRPLSAV 60
           MS S NF N LI SSSVF NS K K  S F+LHPL SP SL   SKSI  PSSRRPLSAV
Sbjct: 1   MSSSFNFTNPLIHSSSVFTNSHKSKSKSSFLLHPLTSPISLLIPSKSIKTPSSRRPLSAV 60

Query: 61  LTREQTDLQSEVGQND-QNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLL 120
           LT EQT+LQ ++ QND QN  FRF+DYM+QKANLVNQALNDAVSL+DPLKIHEAMRYSLL
Sbjct: 61  LTTEQTELQPKLEQNDDQNPSFRFKDYMIQKANLVNQALNDAVSLQDPLKIHEAMRYSLL 120

Query: 121 AGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180
           AGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN
Sbjct: 121 AGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTN 180

Query: 181 HRIFGEDVAVLAGDALLSFAFEHMAAATE---VPPERVVRAIEELAKATGTGGLVAGQVV 240
           HR+FGEDVAVLAGDALLSFAFEHMAAA     V PERVVRAI ELAKATG+GGLVAGQVV
Sbjct: 181 HRMFGEDVAVLAGDALLSFAFEHMAAAVTAAGVSPERVVRAIGELAKATGSGGLVAGQVV 240

Query: 241 DIDSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQ 300
           DI+SEGANDVGLELLE+IHVHKTAALLEAAAVIGAIVGGGSEEE+EKLR F+R IGLLFQ
Sbjct: 241 DIESEGANDVGLELLEYIHVHKTAALLEAAAVIGAIVGGGSEEEIEKLRIFARRIGLLFQ 300

Query: 301 VVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPV 360
           VVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAE LR+EAVE LAGFDPV
Sbjct: 301 VVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAETLREEAVEALAGFDPV 360

Query: 361 KAEPLIALSNYIAYRQK 372
           KAEPLIALSNYIAYRQ+
Sbjct: 361 KAEPLIALSNYIAYRQR 377

[Close]
BLAST of Lsi01G010540 vs. NCBI nr
Match: gi|590703979|ref|XP_007047029.1| (Geranylgeranyl pyrophosphate synthase 1 [Theobroma cacao])

HSP 1 Score: 476.5 bits (1225), Expect = 4.3e-131
Identity = 255/366 (69.67%), Postives = 303/366 (82.79%), Query Frame = 1 

Query: 10  SLIQSSSVFNNSQKFK----PNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTD 69
           S +QS S+FN + + K    P SF   +PL + SS + K   + +S   +SAVLT+E T 
Sbjct: 8   SWVQSYSIFNQASRSKSIPLPRSF-PFNPLKNLSSSTPKK-RSLTSLPSISAVLTKEDTI 67

Query: 70  LQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRP 129
            + E  Q+ Q   F F+ YMVQKA+ VNQAL+ AVSLRDP+KIHEAMRYSLLAGGKRVRP
Sbjct: 68  KEEE--QDPQKPSFDFKSYMVQKASTVNQALDSAVSLRDPVKIHEAMRYSLLAGGKRVRP 127

Query: 130 VLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDV 189
            LCLAAC+LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+
Sbjct: 128 ALCLAACELVGGQESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDI 187

Query: 190 AVLAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGANDV 249
           AVLAGDALL+FAFEH+A +T  V P RVV+A+ ELAKA GT GLVAGQVVDI+SEG  DV
Sbjct: 188 AVLAGDALLAFAFEHIAVSTVGVTPGRVVKAVGELAKAIGTEGLVAGQVVDINSEGLIDV 247

Query: 250 GLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTK 309
           GL+ LEFIHVHKTA LLEAA V+GAI+GGG +E+VEKLRKF+R+IGLLFQVVDDILDVTK
Sbjct: 248 GLDHLEFIHVHKTAVLLEAAVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILDVTK 307

Query: 310 STEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSN 369
           S+++LGKTAGKD+ A+K TYPKLMGIEKS+EFAE L+ +A+E L GFDP KA PL+AL+N
Sbjct: 308 SSKDLGKTAGKDLVADKVTYPKLMGIEKSREFAEKLKSDALELLQGFDPEKAAPLVALAN 367

Query: 370 YIAYRQ 371
           YIAYRQ
Sbjct: 368 YIAYRQ 369

[Close]
BLAST of Lsi01G010540 vs. NCBI nr
Match: gi|157965847|gb|ABW06960.1| (geranylgeranyl diphosphate synthase [Corylus avellana])

HSP 1 Score: 475.7 bits (1223), Expect = 7.3e-131
Identity = 257/375 (68.53%), Postives = 305/375 (81.33%), Query Frame = 1 

Query: 1   MSCSVNFANSLIQSSSVFNN---SQKFKPNSFFVLHPL-NSPSSLSSKSINNPSSRRPLS 60
           MSC VN + + +Q+ S+FN    S+     SF +LHPL N P S          S   +S
Sbjct: 1   MSC-VNLS-TWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISSVSVS 60

Query: 61  AVLTREQTDLQSEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSL 120
           AVLT+E T  + E  +++  T F F+ YM+QKAN VNQAL+ AVSL+DP KIHEAMRYSL
Sbjct: 61  AVLTKEDTLREEEESESEART-FNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRYSL 120

Query: 121 LAGGKRVRPVLCLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPT 180
           LAGGKRVRP+LC+AAC+LVGG ES A+PAACS+EMIHTMSLIHDDLPCMDNDDLRRGKPT
Sbjct: 121 LAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGKPT 180

Query: 181 NHRIFGEDVAVLAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVD 240
           NH++FGEDVAVLAGDALL+F+FEH+A +TE VPP R++RAI ELA++ G  GLVAGQVVD
Sbjct: 181 NHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQVVD 240

Query: 241 IDSEGANDVGLELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQV 300
           I SEG +DVGLE LEFIH+HKTAALLE A V+GAI+GGGS EEVEKLR F+R+IGLLFQV
Sbjct: 241 ICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLFQV 300

Query: 301 VDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVK 360
           VDDILDVTKS++ELGKTAGKD+ A+K TYPKLMG+EKS+EFAE L K+A + LAGFD  K
Sbjct: 301 VDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDAEK 360

Query: 361 AEPLIALSNYIAYRQ 371
           A PLIAL+NYIA+RQ
Sbjct: 361 AAPLIALANYIAHRQ 372

[Close]
BLAST of Lsi01G010540 vs. NCBI nr
Match: gi|823192258|ref|XP_012491701.1| (PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 475.3 bits (1222), Expect = 9.6e-131
Identity = 257/364 (70.60%), Postives = 297/364 (81.59%), Query Frame = 1 

Query: 12  IQSSSVFNN----SQKFKPNSFFVLHPLNSPSSLSSKSINNPSSRRPLSAVLTREQTDLQ 71
           +QS S+ N     S+ F        +PL + SS + K +N  SS   +++VLT+E  D+ 
Sbjct: 10  VQSYSMPNQVSSISKSFPLPRSLPFNPLTTQSSSTLKKVNF-SSLPSITSVLTKE--DIV 69

Query: 72  SEVGQNDQNTPFRFRDYMVQKANLVNQALNDAVSLRDPLKIHEAMRYSLLAGGKRVRPVL 131
            E  Q+ Q + F F  YM+QKA+ VNQAL  AVSLRDP+KIHEAMRYSLLAGGKRVRPVL
Sbjct: 70  KEEEQDPQKSSFDFNSYMLQKASAVNQALESAVSLRDPVKIHEAMRYSLLAGGKRVRPVL 129

Query: 132 CLAACDLVGGPESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRIFGEDVAV 191
           CLAAC LVGG ES A+PAAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+AV
Sbjct: 130 CLAACALVGGRESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDIAV 189

Query: 192 LAGDALLSFAFEHMAAATE-VPPERVVRAIEELAKATGTGGLVAGQVVDIDSEGANDVGL 251
           LAGDALL+FAFEH+A +T  VPP R+VRAI ELAKA G  GLVAGQVVDI SEG  DVGL
Sbjct: 190 LAGDALLAFAFEHIAVSTVGVPPSRIVRAIGELAKAIGGEGLVAGQVVDIISEGLTDVGL 249

Query: 252 ELLEFIHVHKTAALLEAAAVIGAIVGGGSEEEVEKLRKFSRHIGLLFQVVDDILDVTKST 311
           + LEFIHVHKTAALLEAA V+GAIVGGG +EEVEKLRKF+R IGLLFQVVDDILDVTKS+
Sbjct: 250 DHLEFIHVHKTAALLEAAVVLGAIVGGGCDEEVEKLRKFARCIGLLFQVVDDILDVTKSS 309

Query: 312 EELGKTAGKDVAAEKATYPKLMGIEKSKEFAENLRKEAVETLAGFDPVKAEPLIALSNYI 371
           +ELGKTAGKD+ A+K TYPKLMGI+KSKEFAE L+ +A+E L GFDP KA PLIAL+NYI
Sbjct: 310 KELGKTAGKDLVADKVTYPKLMGIQKSKEFAEKLKTDAIELLQGFDPAKAAPLIALANYI 369

The following BLAST results are available for this feature:
BLAST of Lsi01G010540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GGPP1_ARATH1.1e-12670.97Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast... [more]
GGPPS_HEVBR1.1e-12666.04Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GG... [more]
GGPPS_CATRO3.0e-12466.76Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus GN=G... [more]
GGPPS_SINAL5.1e-12465.83Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al... [more]
GGPP7_ARATH3.3e-12371.96Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of Lsi01G010540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFZ6_CUCSA7.8e-17286.40Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487640 PE=3 SV=1[more]
A0A061DHH0_THECC3.0e-13169.67Geranylgeranyl pyrophosphate synthase 1 OS=Theobroma cacao GN=TCM_000455 PE=3 SV... [more]
D6BCR2_CORAV5.1e-13168.53Geranylgeranyl diphosphate synthase OS=Corylus avellana GN=GGPPS PE=2 SV=1[more]
A0A0D2SNN1_GOSRA6.7e-13170.60Uncharacterized protein OS=Gossypium raimondii GN=B456_007G206700 PE=3 SV=1[more]
A0A0G2QS78_MALDO3.3e-13066.58Geranylgeranyl diphosphate synthase OS=Malus domestica GN=GGPPS-1 PE=2 SV=1[more]
BLAST of Lsi01G010540 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G36810.16.2e-12870.97 geranylgeranyl pyrophosphate synthase 1[more]
AT2G18620.11.9e-12471.96 Terpenoid synthases superfamily protein[more]
AT3G14550.17.1e-11663.51 geranylgeranyl pyrophosphate synthase 3[more]
AT3G29430.12.1e-11565.67 Terpenoid synthases superfamily protein[more]
AT3G14530.17.8e-11561.26 Terpenoid synthases superfamily protein[more]
BLAST of Lsi01G010540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448558|ref|XP_004142033.1|1.1e-17186.40PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic [Cucumis sativ... [more]
gi|659079248|ref|XP_008440155.1|5.6e-17186.74PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Cucumis ... [more]
gi|590703979|ref|XP_007047029.1|4.3e-13169.67Geranylgeranyl pyrophosphate synthase 1 [Theobroma cacao][more]
gi|157965847|gb|ABW06960.1|7.3e-13168.53geranylgeranyl diphosphate synthase [Corylus avellana][more]
gi|823192258|ref|XP_012491701.1|9.6e-13170.60PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Gossypium ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008299isoprenoid biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR017446Polyprenyl synthetase-related
IPR008949Isoprenoid_synthase_dom_sf
IPR000092Polyprenyl_synt
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008299 isoprenoid biosynthetic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:0016114 terpenoid biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0016740 transferase activity
molecular_function GO:0004161 dimethylallyltranstransferase activity
molecular_function GO:0004337 geranyltranstransferase activity
molecular_function GO:0036422 heptaprenyl diphosphate synthase activity
molecular_function GO:0004311 farnesyltranstransferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G010540.1Lsi01G010540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 108..342
score: 1.2
IPR000092Polyprenyl synthetasePROSITEPS00444POLYPRENYL_SYNTHASE_2coord: 289..301
scor
IPR000092Polyprenyl synthetasePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 157..173
scor
IPR008949Isoprenoid synthase domainGENE3DG3DSA:1.10.600.10coord: 80..369
score: 5.1E
IPR008949Isoprenoid synthase domainunknownSSF48576Terpenoid synthasescoord: 82..351
score: 3.24
IPR017446Polyprenyl synthetase-relatedPANTHERPTHR12001GERANYLGERANYL PYROPHOSPHATE SYNTHASEcoord: 25..370
score: 1.0E
NoneNo IPR availablePANTHERPTHR12001:SF52GERANYLGERANYL PYROPHOSPHATE SYNTHASE 10, MITOCHONDRIAL-RELATEDcoord: 25..370
score: 1.0E