Cucsa.101720 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.101720
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Geranylgeranyl diphosphate synthase
Location	scaffold00927 : 924911 .. 925784 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGACTACATGATCCAGAAGTCTAATTTAGTCAATCAAGCTCTCGACGAAGCCGTTTCTCTCCAGGACCCACTCAAAATCCACGAGGCCATGCGTTACTCTCTCCTCGCTGGCGGAAAACGGGTCCGCCCAGTACTCTGTCTCGCCGCGTGCGATCTCGTCGGCGGTTCTGAATCCGCCGCCATACCGGCTGCTTGTTCCATCGAAATGATCCACACCATGTCACTCATCCACGACGATCTTCCATGCATGGACAACGACGACCTCCGGCGAGGTAAGCCGACGAACCACCGTATGTTCGGGGAGGACGTCGCAGTACTTGCTGGTGACGCGCTGTTATCTTTCGCTTTTGAACATATGGCGGCGACAAAGGCGGAGGTGTCGCCAGAGAGAGTGGTGCGGGCGATTGGGGAACTGGCGAAGGCGACCGGAACGGGAGGGTTGGTGGCAGGGCAAGTGGTGGACATAGACTCGGAAGGAGCAGACGATGTGGGATTGGAACTTCTCGAGTACATCCATGTGCATAAGACGGCGGCACTTCTGGAAGCCGCGGCCGTCATGGGAGCAATCGTGGGCGGCGGAAGCGAGGAGGAAATAGAAAAACTGAGGATATTCGCCCGACGTATCGGACTGTTGTTCCAAGTGGTGGACGACATTCTGGATGTGACGAAATCGACGGAGGAACTGGGGAAAACGGCCGGAAAAGACGTGGCGGCGGAGAAGGCGACGTATCCTAAATTAATGGGAATTGAAAAATCGAAAGAATTCGCAGAAAAATTGAGGGAAGAAGCCATTGAAGCGTTGGCCGGATTCGATCCGGTTAAGGCGGAGCCGTTAATTGCGCTGTCCAATTACATCGCTTACCGGCAAAGATAA

mRNA sequence

AGACTACATGATCCAGAAGTCTAATTTAGTCAATCAAGCTCTCGACGAAGCCGTTTCTCTCCAGGACCCACTCAAAATCCACGAGGCCATGCGTTACTCTCTCCTCGCTGGCGGAAAACGGGTCCGCCCAGTACTCTGTCTCGCCGCGTGCGATCTCGTCGGCGGTTCTGAATCCGCCGCCATACCGGCTGCTTGTTCCATCGAAATGATCCACACCATGTCACTCATCCACGACGATCTTCCATGCATGGACAACGACGACCTCCGGCGAGGTAAGCCGACGAACCACCGTATGTTCGGGGAGGACGTCGCAGTACTTGCTGGTGACGCGCTGTTATCTTTCGCTTTTGAACATATGGCGGCGACAAAGGCGGAGGTGTCGCCAGAGAGAGTGGTGCGGGCGATTGGGGAACTGGCGAAGGCGACCGGAACGGGAGGGTTGGTGGCAGGGCAAGTGGTGGACATAGACTCGGAAGGAGCAGACGATGTGGGATTGGAACTTCTCGAGTACATCCATGTGCATAAGACGGCGGCACTTCTGGAAGCCGCGGCCGTCATGGGAGCAATCGTGGGCGGCGGAAGCGAGGAGGAAATAGAAAAACTGAGGATATTCGCCCGACGTATCGGACTGTTGTTCCAAGTGGTGGACGACATTCTGGATGTGACGAAATCGACGGAGGAACTGGGGAAAACGGCCGGAAAAGACGTGGCGGCGGAGAAGGCGACGTATCCTAAATTAATGGGAATTGAAAAATCGAAAGAATTCGCAGAAAAATTGAGGGAAGAAGCCATTGAAGCGTTGGCCGGATTCGATCCGGTTAAGGCGGAGCCGTTAATTGCGCTGTCCAATTACATCGCTTACCGGCAAAGATAA

Coding sequence (CDS)

ATGATCCAGAAGTCTAATTTAGTCAATCAAGCTCTCGACGAAGCCGTTTCTCTCCAGGACCCACTCAAAATCCACGAGGCCATGCGTTACTCTCTCCTCGCTGGCGGAAAACGGGTCCGCCCAGTACTCTGTCTCGCCGCGTGCGATCTCGTCGGCGGTTCTGAATCCGCCGCCATACCGGCTGCTTGTTCCATCGAAATGATCCACACCATGTCACTCATCCACGACGATCTTCCATGCATGGACAACGACGACCTCCGGCGAGGTAAGCCGACGAACCACCGTATGTTCGGGGAGGACGTCGCAGTACTTGCTGGTGACGCGCTGTTATCTTTCGCTTTTGAACATATGGCGGCGACAAAGGCGGAGGTGTCGCCAGAGAGAGTGGTGCGGGCGATTGGGGAACTGGCGAAGGCGACCGGAACGGGAGGGTTGGTGGCAGGGCAAGTGGTGGACATAGACTCGGAAGGAGCAGACGATGTGGGATTGGAACTTCTCGAGTACATCCATGTGCATAAGACGGCGGCACTTCTGGAAGCCGCGGCCGTCATGGGAGCAATCGTGGGCGGCGGAAGCGAGGAGGAAATAGAAAAACTGAGGATATTCGCCCGACGTATCGGACTGTTGTTCCAAGTGGTGGACGACATTCTGGATGTGACGAAATCGACGGAGGAACTGGGGAAAACGGCCGGAAAAGACGTGGCGGCGGAGAAGGCGACGTATCCTAAATTAATGGGAATTGAAAAATCGAAAGAATTCGCAGAAAAATTGAGGGAAGAAGCCATTGAAGCGTTGGCCGGATTCGATCCGGTTAAGGCGGAGCCGTTAATTGCGCTGTCCAATTACATCGCTTACCGGCAAAGATAA

Protein sequence

MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIPAACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAATKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR*

Homology

[Close]

BLAST of Cucsa.101720 vs. Swiss-Prot
Match: GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 443.7 bits (1140), Expect = 1.5e-123
Identity = 228/291 (78.35%), Postives = 261/291 (89.69%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           +I K+ LVN+ALD AV L++PLKIHEAMRYSLLAGGKRVRPVLC+AAC+LVGG ES A+P
Sbjct: 80  IITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMA-A 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALLSFAFEH+A A
Sbjct: 140 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASA 199

Query: 121 TKAE-VSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGAD--DVGLELLEYIHVHKTAA 180
           T ++ VSP RVVRA+GELAKA GT GLVAGQVVDI SEG D  DVGLE LE+IH+HKTAA
Sbjct: 200 TSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAA 259

Query: 181 LLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAA 240
           LLEA+AV+GAIVGGGS++EIE+LR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A
Sbjct: 260 LLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIA 319

Query: 241 EKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           +K TYPK+MG+EKS+EFAEKL  EA + L GFD  K  PL+AL+NYIAYRQ
Sbjct: 320 DKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370

[Close]

BLAST of Cucsa.101720 vs. Swiss-Prot
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GGPS PE=1 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.4e-123
Identity = 217/287 (75.61%), Postives = 255/287 (88.85%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+QK N +NQAL+ A+ LQ+P KIHE+MRYSLLAGGKRVRP LCLAAC+LVGG++S A+P
Sbjct: 83  MLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMP 142

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH +FGEDVAVLAGDALL+FAFEH+A +
Sbjct: 143 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVS 202

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              VS  R+VRA+GELAKA G  GLVAGQVVDI+SEG+ +V LE LE+IH+HKTA LLE 
Sbjct: 203 TLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEG 262

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           A V+GAI+GGG++EE+EKLR +AR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 263 AVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 322

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKL+GIEKS+EFAEKL +EA E LAGFDP KA PLIAL+NYIA+RQ
Sbjct: 323 YPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAHRQ 369

[Close]

BLAST of Cucsa.101720 vs. Swiss-Prot
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 6.3e-122
Identity = 223/290 (76.90%), Postives = 259/290 (89.31%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           +I+K++ VN+ALD AV L++PLKIHEAMRYSLLAGGKRVRPVLC+AAC+LVGG ES A+P
Sbjct: 76  IIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMP 135

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMA-A 120
           A C++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH+++GEDVAVLAGDALLSFAFEH+A A
Sbjct: 136 ARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASA 195

Query: 121 TKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGAD--DVGLELLEYIHVHKTAAL 180
           T +EVSP RVVRA+GELAKA GT GLVAGQVVDI SEG D  +VGLE L++IH+HKTAAL
Sbjct: 196 TSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAAL 255

Query: 181 LEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAE 240
           LEA+AV+G I+GGGS+EEIE+LR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+
Sbjct: 256 LEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIAD 315

Query: 241 KATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           K TYPKLMG+EKS+EFAEKL  EA + L GFD  K  PL+AL+NYIA RQ
Sbjct: 316 KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQ 365

[Close]

BLAST of Cucsa.101720 vs. Swiss-Prot
Match: GGPP7_ARATH (Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 8.3e-122
Identity = 223/289 (77.16%), Postives = 256/289 (88.58%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI K+N VN+ALD AVSL++P+KIHEA+RYSLLA GKRVRPVLC+AAC+LVGG ES A+P
Sbjct: 59  MIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALP 118

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDAL+SFAFEH+ AT
Sbjct: 119 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHL-AT 178

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGAD--DVGLELLEYIHVHKTAALL 180
              VSP RVVRAIGELAKA G+ GLVAGQVVD+ S G D  DVGLE+LE+IHVHKTA LL
Sbjct: 179 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLL 238

Query: 181 EAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEK 240
           EAA V+GAIVGGGS+EE+EKLR FAR IGLLFQVVDDILDVTKS+EELGKTAGKD+ A+K
Sbjct: 239 EAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADK 298

Query: 241 ATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
            TYPKLMG+EKSK+FA+KL  +A E L GFD  + +PL+AL+NYIA RQ
Sbjct: 299 LTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQ 346

[Close]

BLAST of Cucsa.101720 vs. Swiss-Prot
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.3e-119
Identity = 212/286 (74.13%), Postives = 252/286 (88.11%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI K+N VN+AL++AV +++PLKIHE+MRYSLLAGGKRVRP+LC+AAC+L GG+ES A+P
Sbjct: 70  MIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMP 129

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           +AC++EMIHTMSL+HDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALL+FAFEH+A  
Sbjct: 130 SACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATA 189

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              VS ER+VR +GELAK  G+ GLVAGQVVD+ SEG  DVGLE LE+IH+HKTAALLE 
Sbjct: 190 TKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEG 249

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           + V+GAIVGG ++E+I KLR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 250 SVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 309

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYR 287
           YPKL+GI+KS+EFAEKL  EA E LA FDP KA PLIAL+NYIAYR
Sbjct: 310 YPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYR 355

[Close]

BLAST of Cucsa.101720 vs. TrEMBL
Match: A0A0A0KFZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487640 PE=3 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 1.8e-155
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP
Sbjct: 88  MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 147

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT
Sbjct: 148 AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 207

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
           KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA
Sbjct: 208 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 267

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT
Sbjct: 268 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 327

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR 289
           YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR
Sbjct: 328 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR 375

[Close]

BLAST of Cucsa.101720 vs. TrEMBL
Match: A0A0G2QS78_MALDO (Geranylgeranyl diphosphate synthase OS=Malus domestica GN=GGPPS-1 PE=2 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.1e-125
Identity = 226/287 (78.75%), Postives = 260/287 (90.59%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+Q++  VNQALD AVSL+DP+ IHEAMRYSLLAGGKRVRPVLCLAAC+LVGGSES A+P
Sbjct: 87  MLQRAESVNQALDAAVSLRDPITIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESMAMP 146

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALL+FAFEH++ +
Sbjct: 147 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHISLS 206

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              VSP R+VRA+GELAK+ G+ GLVAGQVVDIDSEG  DVGLE LEYIH+HKTAALLE 
Sbjct: 207 TVGVSPARIVRAVGELAKSIGSEGLVAGQVVDIDSEGLSDVGLEQLEYIHLHKTAALLEC 266

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           + V+G+I+GGGS+ EIEKLR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 267 SVVLGSILGGGSDSEIEKLRTFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 326

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKL+GIEKS+EFAEKL ++A E LAGFDP KA PLIAL+NYIAYRQ
Sbjct: 327 YPKLLGIEKSREFAEKLNKDAKEQLAGFDPEKAAPLIALANYIAYRQ 373

[Close]

BLAST of Cucsa.101720 vs. TrEMBL
Match: A0A0D2SNN1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G206700 PE=3 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 1.9e-125
Identity = 229/287 (79.79%), Postives = 258/287 (89.90%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+QK++ VNQAL+ AVSL+DP+KIHEAMRYSLLAGGKRVRPVLCLAAC LVGG ES A+P
Sbjct: 84  MLQKASAVNQALESAVSLRDPVKIHEAMRYSLLAGGKRVRPVLCLAACALVGGRESMAMP 143

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+AVLAGDALL+FAFEH+A +
Sbjct: 144 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFAFEHIAVS 203

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              V P R+VRAIGELAKA G  GLVAGQVVDI SEG  DVGL+ LE+IHVHKTAALLEA
Sbjct: 204 TVGVPPSRIVRAIGELAKAIGGEGLVAGQVVDIISEGLTDVGLDHLEFIHVHKTAALLEA 263

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           A V+GAIVGGG +EE+EKLR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 264 AVVLGAIVGGGCDEEVEKLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKVT 323

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKLMGI+KSKEFAEKL+ +AIE L GFDP KA PLIAL+NYIAYRQ
Sbjct: 324 YPKLMGIQKSKEFAEKLKTDAIELLQGFDPAKAAPLIALANYIAYRQ 370

[Close]

BLAST of Cucsa.101720 vs. TrEMBL
Match: I1LHM6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G063900 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.5e-125
Identity = 227/287 (79.09%), Postives = 262/287 (91.29%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI K++ VNQALD A++L+DP KIH+AMRYSLLAGGKRVRPVLC+AAC+LVGG+E+ AIP
Sbjct: 82  MIAKAHTVNQALDAAIALRDPHKIHQAMRYSLLAGGKRVRPVLCIAACELVGGTEATAIP 141

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH+++GEDVAVLAGDALL+FAFEH+AA+
Sbjct: 142 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLAFAFEHVAAS 201

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              VSP RVVRAIGELAK+ GT GLVAGQVVDIDSEG  +VGLE LE+IHVHKTAALLEA
Sbjct: 202 TEGVSPSRVVRAIGELAKSIGTEGLVAGQVVDIDSEGVANVGLETLEFIHVHKTAALLEA 261

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           A V+GAIVGGGS+EE+EKLR FAR IGLLFQVVDDILDVTKS+EELGKTAGKD+ A+K T
Sbjct: 262 AVVLGAIVGGGSDEEVEKLRKFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVADKVT 321

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKL+GI+KSKEFA++L ++A E L+GFDP KA PL AL+NYIAYRQ
Sbjct: 322 YPKLLGIDKSKEFAQELLKDAKEQLSGFDPPKAAPLFALTNYIAYRQ 368

[Close]

BLAST of Cucsa.101720 vs. TrEMBL
Match: A0A061DHH0_THECC (Geranylgeranyl pyrophosphate synthase 1 OS=Theobroma cacao GN=TCM_000455 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 5.6e-125
Identity = 223/287 (77.70%), Postives = 260/287 (90.59%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+QK++ VNQALD AVSL+DP+KIHEAMRYSLLAGGKRVRP LCLAAC+LVGG ES A+P
Sbjct: 83  MVQKASTVNQALDSAVSLRDPVKIHEAMRYSLLAGGKRVRPALCLAACELVGGQESMAMP 142

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+AVLAGDALL+FAFEH+A +
Sbjct: 143 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFAFEHIAVS 202

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              V+P RVV+A+GELAKA GT GLVAGQVVDI+SEG  DVGL+ LE+IHVHKTA LLEA
Sbjct: 203 TVGVTPGRVVKAVGELAKAIGTEGLVAGQVVDINSEGLIDVGLDHLEFIHVHKTAVLLEA 262

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           A V+GAI+GGG +E++EKLR FAR IGLLFQVVDDILDVTKS+++LGKTAGKD+ A+K T
Sbjct: 263 AVVLGAILGGGCDEDVEKLRKFARYIGLLFQVVDDILDVTKSSKDLGKTAGKDLVADKVT 322

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKLMGIEKS+EFAEKL+ +A+E L GFDP KA PL+AL+NYIAYRQ
Sbjct: 323 YPKLMGIEKSREFAEKLKSDALELLQGFDPEKAAPLVALANYIAYRQ 369

[Close]

BLAST of Cucsa.101720 vs. TAIR10
Match: AT4G36810.1 (AT4G36810.1 geranylgeranyl pyrophosphate synthase 1)

HSP 1 Score: 443.7 bits (1140), Expect = 8.5e-125
Identity = 228/291 (78.35%), Postives = 261/291 (89.69%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           +I K+ LVN+ALD AV L++PLKIHEAMRYSLLAGGKRVRPVLC+AAC+LVGG ES A+P
Sbjct: 80  IITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMP 139

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMA-A 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALLSFAFEH+A A
Sbjct: 140 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASA 199

Query: 121 TKAE-VSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGAD--DVGLELLEYIHVHKTAA 180
           T ++ VSP RVVRA+GELAKA GT GLVAGQVVDI SEG D  DVGLE LE+IH+HKTAA
Sbjct: 200 TSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAA 259

Query: 181 LLEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAA 240
           LLEA+AV+GAIVGGGS++EIE+LR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A
Sbjct: 260 LLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIA 319

Query: 241 EKATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           +K TYPK+MG+EKS+EFAEKL  EA + L GFD  K  PL+AL+NYIAYRQ
Sbjct: 320 DKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQ 370

[Close]

BLAST of Cucsa.101720 vs. TAIR10
Match: AT2G18620.1 (AT2G18620.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 438.0 bits (1125), Expect = 4.7e-123
Identity = 223/289 (77.16%), Postives = 256/289 (88.58%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI K+N VN+ALD AVSL++P+KIHEA+RYSLLA GKRVRPVLC+AAC+LVGG ES A+P
Sbjct: 59  MIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALP 118

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDAL+SFAFEH+ AT
Sbjct: 119 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHL-AT 178

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGAD--DVGLELLEYIHVHKTAALL 180
              VSP RVVRAIGELAKA G+ GLVAGQVVD+ S G D  DVGLE+LE+IHVHKTA LL
Sbjct: 179 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLL 238

Query: 181 EAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEK 240
           EAA V+GAIVGGGS+EE+EKLR FAR IGLLFQVVDDILDVTKS+EELGKTAGKD+ A+K
Sbjct: 239 EAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADK 298

Query: 241 ATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
            TYPKLMG+EKSK+FA+KL  +A E L GFD  + +PL+AL+NYIA RQ
Sbjct: 299 LTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQ 346

[Close]

BLAST of Cucsa.101720 vs. TAIR10
Match: AT3G14550.1 (AT3G14550.1 geranylgeranyl pyrophosphate synthase 3)

HSP 1 Score: 400.6 bits (1028), Expect = 8.2e-112
Identity = 204/289 (70.59%), Postives = 245/289 (84.78%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI+K+  VN ALD +V L++PL + EA+RYSLLAGGKRVRP+LC+A C+LVGG E+ A+ 
Sbjct: 70  MIRKAESVNAALDVSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMS 129

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMA-A 120
           AAC++EMIHT SLIHDDLPCMDN DLRRGKPTNH+++GED+AVLAGDALL+ AFEHM   
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTFV 189

Query: 121 TKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSE--GADDVGLELLEYIHVHKTAAL 180
           +   V+PER++RA+ ELA+A GT GLVAGQ++D+ SE    D VGLE LE+IH+HKTAAL
Sbjct: 190 SSGLVAPERMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249

Query: 181 LEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAE 240
           LEAAAV+G I+GGG+EEEIEKLR +AR IGLLFQVVDDILDVTKSTEELGKTAGKDV A 
Sbjct: 250 LEAAAVLGVIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309

Query: 241 KATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYR 287
           K TYP+L+G+E+SKE AEKLR EA E L GFDP KA PL+AL++YIA R
Sbjct: 310 KLTYPRLIGLERSKEVAEKLRREAEEQLLGFDPSKAAPLVALASYIACR 358

[Close]

BLAST of Cucsa.101720 vs. TAIR10
Match: AT3G29430.1 (AT3G29430.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 397.9 bits (1021), Expect = 5.3e-111
Identity = 205/289 (70.93%), Postives = 246/289 (85.12%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI+K+  V+ AL+ +V LQ+PL I EA+RYSLLAGGKRVRP+LC+AAC+LVGG E+ A+ 
Sbjct: 67  MIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 126

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMA-A 120
           AAC++EMIHT SLIHDDLPCMD+ DLRRGKPTNH+ FGED+AVLAGDALL+ AFEHM   
Sbjct: 127 AACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFV 186

Query: 121 TKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGA--DDVGLELLEYIHVHKTAAL 180
           +   V+PER++RA+ ELAKA GT GLVAGQV D+ S+G   DDVGLE LE+IH+HKTAAL
Sbjct: 187 SNGLVAPERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKTAAL 246

Query: 181 LEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAE 240
           LEAAAV+GAI+GGG+EEEIEKLR +AR IGLLFQVVDDILDVT+ST+ELGKTAGKDV A 
Sbjct: 247 LEAAAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAG 306

Query: 241 KATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYR 287
           K TYP+L+G+E+S+E AEKLR EA E L GFD  KA PL+AL++YIA R
Sbjct: 307 KLTYPRLIGLERSREVAEKLRREAAEQLLGFDSDKAAPLVALASYIACR 355

[Close]

BLAST of Cucsa.101720 vs. TAIR10
Match: AT3G14530.1 (AT3G14530.1 Terpenoid synthases superfamily protein)

HSP 1 Score: 395.6 bits (1015), Expect = 2.7e-110
Identity = 203/289 (70.24%), Postives = 243/289 (84.08%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MI+K+  VN ALD +V L  PL I EA+RYSLLAGGKRVRP+LC+AAC+LVGG E+ A+ 
Sbjct: 70  MIRKAESVNAALDVSVPLLKPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATAMS 129

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHT SLIHDDLPCMDN DLRRGKPTNH+++GED+AVLAGDALL+ AFEHM   
Sbjct: 130 AACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVV 189

Query: 121 KAE-VSPERVVRAIGELAKATGTGGLVAGQVVDIDSE--GADDVGLELLEYIHVHKTAAL 180
            +  V+PE+++RA+ ELA+A GT GLVAGQ++D+ SE    D VGLE LE+IH+HKTAAL
Sbjct: 190 SSGLVAPEKMIRAVVELARAIGTTGLVAGQMIDLASERLNPDKVGLEHLEFIHLHKTAAL 249

Query: 181 LEAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAE 240
           LEAAAV+G I+GGG+E+EIEKLR +AR IGLLFQVVDDILDVTKSTEELGKTAGKDV A 
Sbjct: 250 LEAAAVLGVIMGGGTEQEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAG 309

Query: 241 KATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYR 287
           K TYP+L+G+E S+E AEKLR EA E L GFDP KA PL+AL++YIA R
Sbjct: 310 KLTYPRLIGLEGSREVAEKLRREAEEQLLGFDPSKAAPLVALASYIACR 358

[Close]

BLAST of Cucsa.101720 vs. NCBI nr
Match: gi|449448558|ref|XP_004142033.1| (PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic [Cucumis sativus])

HSP 1 Score: 556.6 bits (1433), Expect = 2.5e-155
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP
Sbjct: 88  MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 147

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT
Sbjct: 148 AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 207

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
           KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA
Sbjct: 208 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 267

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT
Sbjct: 268 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 327

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR 289
           YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR
Sbjct: 328 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR 375

[Close]

BLAST of Cucsa.101720 vs. NCBI nr
Match: gi|659079248|ref|XP_008440155.1| (PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Cucumis melo])

HSP 1 Score: 531.2 bits (1367), Expect = 1.1e-147
Identity = 276/290 (95.17%), Postives = 284/290 (97.93%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           MIQK+NLVNQAL++AVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGG ESAAIP
Sbjct: 88  MIQKANLVNQALNDAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGPESAAIP 147

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAA- 120
           AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAA 
Sbjct: 148 AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAA 207

Query: 121 -TKAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALL 180
            T A VSPERVVRAIGELAKATG+GGLVAGQVVDI+SEGA+DVGLELLEYIHVHKTAALL
Sbjct: 208 VTAAGVSPERVVRAIGELAKATGSGGLVAGQVVDIESEGANDVGLELLEYIHVHKTAALL 267

Query: 181 EAAAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEK 240
           EAAAV+GAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEK
Sbjct: 268 EAAAVIGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEK 327

Query: 241 ATYPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQR 289
           ATYPKLMGIEKSKEFAE LREEA+EALAGFDPVKAEPLIALSNYIAYRQR
Sbjct: 328 ATYPKLMGIEKSKEFAETLREEAVEALAGFDPVKAEPLIALSNYIAYRQR 377

[Close]

BLAST of Cucsa.101720 vs. NCBI nr
Match: gi|558549761|gb|AHA61556.1| (geranylgeranyl diphosphate synthase [Malus domestica])

HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-125
Identity = 226/287 (78.75%), Postives = 260/287 (90.59%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+Q++  VNQALD AVSL+DP+ IHEAMRYSLLAGGKRVRPVLCLAAC+LVGGSES A+P
Sbjct: 87  MLQRAESVNQALDAAVSLRDPITIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESMAMP 146

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALL+FAFEH++ +
Sbjct: 147 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHISLS 206

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              VSP R+VRA+GELAK+ G+ GLVAGQVVDIDSEG  DVGLE LEYIH+HKTAALLE 
Sbjct: 207 TVGVSPARIVRAVGELAKSIGSEGLVAGQVVDIDSEGLSDVGLEQLEYIHLHKTAALLEC 266

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           + V+G+I+GGGS+ EIEKLR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 267 SVVLGSILGGGSDSEIEKLRTFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 326

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKL+GIEKS+EFAEKL ++A E LAGFDP KA PLIAL+NYIAYRQ
Sbjct: 327 YPKLLGIEKSREFAEKLNKDAKEQLAGFDPEKAAPLIALANYIAYRQ 373

[Close]

BLAST of Cucsa.101720 vs. NCBI nr
Match: gi|657948668|ref|XP_008338839.1| (PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Malus domestica])

HSP 1 Score: 457.6 bits (1176), Expect = 1.6e-125
Identity = 226/287 (78.75%), Postives = 260/287 (90.59%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+Q++  VNQALD AVSL+DP+ IHEAMRYSLLAGGKRVRPVLCLAAC+LVGGSES A+P
Sbjct: 87  MLQRAESVNQALDAAVSLRDPITIHEAMRYSLLAGGKRVRPVLCLAACELVGGSESMAMP 146

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGEDVAVLAGDALL+FAFEH++ +
Sbjct: 147 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHISLS 206

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              VSP R+VRA+GELAK+ G+ GLVAGQVVDIDSEG  DVGLE LEYIH+HKTAALLE 
Sbjct: 207 TVGVSPARIVRAVGELAKSIGSEGLVAGQVVDIDSEGLSDVGLEQLEYIHLHKTAALLEC 266

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           + V+G+I+GGGS+ EIEKLR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 267 SVVLGSILGGGSDSEIEKLRTFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVT 326

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKL+GIEKS+EFAEKL ++A E LAGFDP KA PLIAL+NYIAYRQ
Sbjct: 327 YPKLLGIEKSREFAEKLNKDAKEQLAGFDPEKAAPLIALANYIAYRQ 373

[Close]

BLAST of Cucsa.101720 vs. NCBI nr
Match: gi|823192258|ref|XP_012491701.1| (PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 456.8 bits (1174), Expect = 2.7e-125
Identity = 229/287 (79.79%), Postives = 258/287 (89.90%), Query Frame = 1


Query: 1   MIQKSNLVNQALDEAVSLQDPLKIHEAMRYSLLAGGKRVRPVLCLAACDLVGGSESAAIP 60
           M+QK++ VNQAL+ AVSL+DP+KIHEAMRYSLLAGGKRVRPVLCLAAC LVGG ES A+P
Sbjct: 84  MLQKASAVNQALESAVSLRDPVKIHEAMRYSLLAGGKRVRPVLCLAACALVGGRESMAMP 143

Query: 61  AACSIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHRMFGEDVAVLAGDALLSFAFEHMAAT 120
           AAC++EMIHTMSLIHDDLPCMDNDDLRRGKPTNH++FGED+AVLAGDALL+FAFEH+A +
Sbjct: 144 AACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDIAVLAGDALLAFAFEHIAVS 203

Query: 121 KAEVSPERVVRAIGELAKATGTGGLVAGQVVDIDSEGADDVGLELLEYIHVHKTAALLEA 180
              V P R+VRAIGELAKA G  GLVAGQVVDI SEG  DVGL+ LE+IHVHKTAALLEA
Sbjct: 204 TVGVPPSRIVRAIGELAKAIGGEGLVAGQVVDIISEGLTDVGLDHLEFIHVHKTAALLEA 263

Query: 181 AAVMGAIVGGGSEEEIEKLRIFARRIGLLFQVVDDILDVTKSTEELGKTAGKDVAAEKAT 240
           A V+GAIVGGG +EE+EKLR FAR IGLLFQVVDDILDVTKS++ELGKTAGKD+ A+K T
Sbjct: 264 AVVLGAIVGGGCDEEVEKLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLVADKVT 323

Query: 241 YPKLMGIEKSKEFAEKLREEAIEALAGFDPVKAEPLIALSNYIAYRQ 288
           YPKLMGI+KSKEFAEKL+ +AIE L GFDP KA PLIAL+NYIAYRQ
Sbjct: 324 YPKLMGIQKSKEFAEKLKTDAIELLQGFDPAKAAPLIALANYIAYRQ 370

The following BLAST results are available for this feature:

BLAST of Cucsa.101720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GGPP1_ARATH	1.5e-123	78.35	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
GGPPS_HEVBR	4.4e-123	75.61	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis GN=GG...	[more]
GGPPS_SINAL	6.3e-122	76.90	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]
GGPP7_ARATH	8.3e-122	77.16	Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana G...	[more]
GGPPS_CATRO	1.3e-119	74.13	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus GN=G...	[more]

BLAST of Cucsa.101720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFZ6_CUCSA	1.8e-155	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G487640 PE=3 SV=1	[more]
A0A0G2QS78_MALDO	1.1e-125	78.75	Geranylgeranyl diphosphate synthase OS=Malus domestica GN=GGPPS-1 PE=2 SV=1	[more]
A0A0D2SNN1_GOSRA	1.9e-125	79.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G206700 PE=3 SV=1	[more]
I1LHM6_SOYBN	2.5e-125	79.09	Uncharacterized protein OS=Glycine max GN=GLYMA_11G063900 PE=3 SV=1	[more]
A0A061DHH0_THECC	5.6e-125	77.70	Geranylgeranyl pyrophosphate synthase 1 OS=Theobroma cacao GN=TCM_000455 PE=3 SV...	[more]

BLAST of Cucsa.101720 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G36810.1	8.5e-125	78.35	geranylgeranyl pyrophosphate synthase 1	[more]
AT2G18620.1	4.7e-123	77.16	Terpenoid synthases superfamily protein	[more]
AT3G14550.1	8.2e-112	70.59	geranylgeranyl pyrophosphate synthase 3	[more]
AT3G29430.1	5.3e-111	70.93	Terpenoid synthases superfamily protein	[more]
AT3G14530.1	2.7e-110	70.24	Terpenoid synthases superfamily protein	[more]

BLAST of Cucsa.101720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448558\|ref\|XP_004142033.1\|	2.5e-155	100.00	PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic [Cucumis sativ...	[more]
gi\|659079248\|ref\|XP_008440155.1\|	1.1e-147	95.17	PREDICTED: geranylgeranyl pyrophosphate synthase 7, chloroplastic-like [Cucumis ...	[more]
gi\|558549761\|gb\|AHA61556.1\|	1.6e-125	78.75	geranylgeranyl diphosphate synthase [Malus domestica]	[more]
gi\|657948668\|ref\|XP_008338839.1\|	1.6e-125	78.75	PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Malus dome...	[more]
gi\|823192258\|ref\|XP_012491701.1\|	2.7e-125	79.79	PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Gossypium ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000092	Polyprenyl_synt
IPR008949	Isoprenoid_synthase_dom_sf
IPR017446	Polyprenyl synthetase-related

Vocabulary: **Biological Process**
Term	Definition
GO:0008299	isoprenoid biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008299	isoprenoid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.101720.1	Cucsa.101720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000092	Polyprenyl synthetase	PFAM	PF00348	polyprenyl_synt	coord: 24..258 score: 3.8
IPR000092	Polyprenyl synthetase	PROSITE	PS00444	POLYPRENYL_SYNTHASE_2	coord: 206..218 scor
IPR000092	Polyprenyl synthetase	PROSITE	PS00723	POLYPRENYL_SYNTHASE_1	coord: 73..89 scor
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 5..286 score: 6.0E
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 3..268 score: 9.76
IPR017446	Polyprenyl synthetase-related	PANTHER	PTHR12001	GERANYLGERANYL PYROPHOSPHATE SYNTHASE	coord: 1..287 score: 4.5E
None	No IPR available	PANTHER	PTHR12001:SF52	GERANYLGERANYL PYROPHOSPHATE SYNTHASE 10, MITOCHONDRIAL-RELATED	coord: 1..287 score: 4.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.101720	Cla008507	Watermelon (97103) v1	cgywmB137
Cucsa.101720	Csa2G296070	Cucumber (Chinese Long) v2	cgycuB115
Cucsa.101720	Csa6G487640	Cucumber (Chinese Long) v2	cgycuB121
Cucsa.101720	MELO3C007490	Melon (DHL92) v3.5.1	cgymeB131
Cucsa.101720	MELO3C020952	Melon (DHL92) v3.5.1	cgymeB123
Cucsa.101720	ClCG01G016200	Watermelon (Charleston Gray)	cgywcgB134
Cucsa.101720	CSPI02G15060	Wild cucumber (PI 183967)	cgycpiB117
Cucsa.101720	CSPI06G27350	Wild cucumber (PI 183967)	cgycpiB122
Cucsa.101720	CmaCh07G007540	Cucurbita maxima (Rimu)	cgycmaB0235
Cucsa.101720	CmoCh07G007770	Cucurbita moschata (Rifu)	cgycmoB0233
Cucsa.101720	CmoCh20G011480	Cucurbita moschata (Rifu)	cgycmoB0223
Cucsa.101720	Lsi01G010540	Bottle gourd (USVL1VR-Ls)	cgylsiB125
Cucsa.101720	Cp4.1LG19g11640	Cucurbita pepo (Zucchini)	cgycpeB0220
Cucsa.101720	MELO3C007490.2	Melon (DHL92) v3.6.1	cgymedB131
Cucsa.101720	MELO3C020952.2	Melon (DHL92) v3.6.1	cgymedB121
Cucsa.101720	CsaV3_2G017600	Cucumber (Chinese Long) v3	cgycucB121
Cucsa.101720	CsaV3_6G042470	Cucumber (Chinese Long) v3	cgycucB126
Cucsa.101720	Bhi03G001528	Wax gourd	cgywgoB155
Cucsa.101720	Bhi10G001860	Wax gourd	cgywgoB150
Cucsa.101720	Carg05263	Silver-seed gourd	carcgyB0918

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cucsa.101720	Cucsa.250460	Cucumber (Gy14) v1	cgycgyB046

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.101720	Cucurbita pepo (Zucchini)	cgycpeB0211
Cucsa.101720	Cucurbita pepo (Zucchini)	cgycpeB0224
Cucsa.101720	Silver-seed gourd	carcgyB0467
Cucsa.101720	Watermelon (97103) v2	cgywmbB127
Cucsa.101720	Cucurbita maxima (Rimu)	cgycmaB0229
Cucsa.101720	Cucurbita maxima (Rimu)	cgycmaB0231
Cucsa.101720	Cucurbita moschata (Rifu)	cgycmoB0225
Cucsa.101720	Cucurbita moschata (Rifu)	cgycmoB0227