Lsi01G010010 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGGGCGGAATTGGTAGCCGGGGCGGCTTTGGGTGCTTTATTAGGAGAGTTACTGAAACGGGTGATTAATTTGATGGAAAAGGCCATTAATTTCAAACCTGTGCTTGCAGAAATCAAAAGCCAGGTAGAGTTTTTAATGCCATTGATGAAGCAGGTGGATGAGCTTGGTGAGGATTTCCAGCTGGAATATTCTAACACTTTGAAGGAAGTCGTACATCAAGGGAAGCAACTGATTATGGAGTGCGATGCTGCCAAACAACGTTTTCTCAAATATCATAAGTTCCCATCTTACACCAAAAGGCTTCGCAAATTGGATGCTCAACTTGAAAGGGCCTCACTCAATTTATTGTTGCAATTGAGTGTACAACACATGAAGAAATTACAAACTTTGGAAATCAATAATAATCGACATGGTCGACCTCGGTTATTGGCATCTAAGATCGTCGATAAAGGCAAGATCGTCATCAAGAAAATATTTATGGGCGAGAGTAGTATTAATAATAATGATTGTAGTTGTGGTCTCCACGGTTACGTTCCAAATTACCCAACAACCAAGCTGCCCTTACTGTTTTACCACGACAAGCGACTCAAAGGTAAACAATAA ATGGAGGGGGCGGAATTGGTAGCCGGGGCGGCTTTGGGTGCTTTATTAGGAGAGTTACTGAAACGGGTGATTAATTTGATGGAAAAGGCCATTAATTTCAAACCTGTGCTTGCAGAAATCAAAAGCCAGGTAGAGTTTTTAATGCCATTGATGAAGCAGGTGGATGAGCTTGGTGAGGATTTCCAGCTGGAATATTCTAACACTTTGAAGGAAGTCGTACATCAAGGGAAGCAACTGATTATGGAGTGCGATGCTGCCAAACAACGTTTTCTCAAATATCATAAGTTCCCATCTTACACCAAAAGGCTTCGCAAATTGGATGCTCAACTTGAAAGGGCCTCACTCAATTTATTGTTGCAATTGAGTGTACAACACATGAAGAAATTACAAACTTTGGAAATCAATAATAATCGACATGGTCGACCTCGGTTATTGGCATCTAAGATCGTCGATAAAGGCAAGATCGTCATCAAGAAAATATTTATGGGCGAGAGTAGTATTAATAATAATGATTGTAGTTGTGGTCTCCACGGTTACGTTCCAAATTACCCAACAACCAAGCTGCCCTTACTGTTTTACCACGACAAGCGACTCAAAGGTAAACAATAA ATGGAGGGGGCGGAATTGGTAGCCGGGGCGGCTTTGGGTGCTTTATTAGGAGAGTTACTGAAACGGGTGATTAATTTGATGGAAAAGGCCATTAATTTCAAACCTGTGCTTGCAGAAATCAAAAGCCAGGTAGAGTTTTTAATGCCATTGATGAAGCAGGTGGATGAGCTTGGTGAGGATTTCCAGCTGGAATATTCTAACACTTTGAAGGAAGTCGTACATCAAGGGAAGCAACTGATTATGGAGTGCGATGCTGCCAAACAACGTTTTCTCAAATATCATAAGTTCCCATCTTACACCAAAAGGCTTCGCAAATTGGATGCTCAACTTGAAAGGGCCTCACTCAATTTATTGTTGCAATTGAGTGTACAACACATGAAGAAATTACAAACTTTGGAAATCAATAATAATCGACATGGTCGACCTCGGTTATTGGCATCTAAGATCGTCGATAAAGGCAAGATCGTCATCAAGAAAATATTTATGGGCGAGAGTAGTATTAATAATAATGATTGTAGTTGTGGTCTCCACGGTTACGTTCCAAATTACCCAACAACCAAGCTGCCCTTACTGTTTTACCACGACAAGCGACTCAAAGGTAAACAATAA MEGAELVAGAALGALLGELLKRVINLMEKAINFKPVLAEIKSQVEFLMPLMKQVDELGEDFQLEYSNTLKEVVHQGKQLIMECDAAKQRFLKYHKFPSYTKRLRKLDAQLERASLNLLLQLSVQHMKKLQTLEINNNRHGRPRLLASKIVDKGKIVIKKIFMGESSINNNDCSCGLHGYVPNYPTTKLPLLFYHDKRLKGKQ
BLAST of Lsi01G010010 vs. TrEMBL
Match: A0A0A0KFQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490150 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42 Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 1
BLAST of Lsi01G010010 vs. TrEMBL
Match: A0A0A0KLB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490160 PE=4 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31 Identity = 90/181 (49.72%), Postives = 116/181 (64.09%), Query Frame = 1
BLAST of Lsi01G010010 vs. TrEMBL
Match: A0A0A0KJI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490170 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.1e-18 Identity = 56/130 (43.08%), Postives = 88/130 (67.69%), Query Frame = 1
BLAST of Lsi01G010010 vs. TrEMBL
Match: B9S8L2_RICCO (Disease resistance protein ADR1, putative OS=Ricinus communis GN=RCOM_0602290 PE=3 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.9e-07 Identity = 51/180 (28.33%), Postives = 94/180 (52.22%), Query Frame = 1
BLAST of Lsi01G010010 vs. TrEMBL
Match: M5W7X2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017669mg PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.8e-06 Identity = 37/111 (33.33%), Postives = 65/111 (58.56%), Query Frame = 1
BLAST of Lsi01G010010 vs. NCBI nr
Match: gi|659079404|ref|XP_008440239.1| (PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo]) HSP 1 Score: 191.4 bits (485), Expect = 1.5e-45 Identity = 116/210 (55.24%), Postives = 143/210 (68.10%), Query Frame = 1
BLAST of Lsi01G010010 vs. NCBI nr
Match: gi|778718310|ref|XP_004142014.2| (PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus]) HSP 1 Score: 181.0 bits (458), Expect = 2.0e-42 Identity = 116/219 (52.97%), Postives = 143/219 (65.30%), Query Frame = 1
BLAST of Lsi01G010010 vs. NCBI nr
Match: gi|659079406|ref|XP_008440240.1| (PREDICTED: uncharacterized protein LOC103484756 [Cucumis melo]) HSP 1 Score: 152.9 bits (385), Expect = 5.9e-34 Identity = 98/202 (48.51%), Postives = 126/202 (62.38%), Query Frame = 1
BLAST of Lsi01G010010 vs. NCBI nr
Match: gi|778718303|ref|XP_011657844.1| (PREDICTED: uncharacterized protein LOC105435900 isoform X1 [Cucumis sativus]) HSP 1 Score: 144.8 bits (364), Expect = 1.6e-31 Identity = 90/181 (49.72%), Postives = 116/181 (64.09%), Query Frame = 1
BLAST of Lsi01G010010 vs. NCBI nr
Match: gi|778718306|ref|XP_011657845.1| (PREDICTED: uncharacterized protein LOC105435900 isoform X2 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 1.4e-22 Identity = 75/154 (48.70%), Postives = 96/154 (62.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |