CsGy6G027320 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACAAATATATAACACATTTTAAAAGTTATCTCATATTTTTTCAATTTTGATCCCATTGTTAGAAGTATTATTGTGTTCTCTAACTAACTTTTTATCACACCAAAATTTCTGTTTCAGTTTCTTTTTTCTTTTTAATTTTCAAAAGAAACAGTTTTATGTTTTAAAAGAGTAACGACAAGCAAAAACGAATCTACTTGAATGGATAAAGGGATCGTATTGATGAGTGAATGCAATTTTGTTTTCTTTTAAAGTGATACATTTTTATTGCTTAAAATTCAATTTTTTTATATATATAATATTAACACATGTTAGAAAAACTTGGTTTTATTTTTATTATTTTCACATATGTGCCCATCTTTAAATAGAAATATTATGATTTGAATATATTAGTTTTAAAAAAGGTTAAATTATATAAATCAAAATACTTTTATAAATTTCGGTGGAAAAGGAAAAAGAAAAAGAAAGAGAGAAAGGAAAGTAAGCTTGTAGTTCAAGTTAAGCACACACCCTCGTCAACAGTATTGAGTCAAGATGAGATGGGTATTTTGCATAGTTTTATATTCCCACTTCCAATCATCTCCCAAGTTTCTGCTATATCAGTTAATAATTGTATACTTTTGAGAGACAGATCATCGATCTTCAAAATAGGAATGGTGGTGGAGGAATTGTTAGTCGGAGCGGCTTTGGGTGCTTTATTAGGAGAGTTGCTGAAAGGGGTTATGAATTTGATGGAAAAATCCGTTCATTTCAAACCTGAGCTTGAACTACTCAAATCACAGATTGAGTTTTTACAGCCATTAGTGGATCAGGTGGATGAGCTTGGTGAGGATTTCAAGCTTCGCTATTCTGATCAAACCTTGAAGATACTCATACGTAAAGGTAAGCAACTTATTAGAGAATGCAATGATGCTGCCATACAAAATACTCTCTCCAGGTACTTCAAGATTCAACTATGTTACACAAAAGACCTTCGAAGATTGGATGCTGAACTTAAAAGGGCGGGAAGCAATTTGAGGTTGGAATTATACGTACAACAAATGAAGAAATTACAAGCTCTGGAAATTAATTACAATAATGATGGCCGCTATGGTCGAATTCTAGATCGAGCCAAATTAATTGTAACCAGCATCCTTACGCATGTTGGTTACAATTTTACATTTGTAACCAACATCCTCGATAAACTATTTTCGGGCGAGAGTGGGAGTAATAATAATAAATATAATATCAAGCTGCCCTTGCTGTTTTATCACGATCAGAGACTCAAAGGTAAACTATATATATCGTTATTAATCATCATCATCGCATCATCCTCGTATGTTTTTTTAATTATATATATTAACCATTTTTTGTATGATATTATTAAATTGTATAAATGGGTGTAGGGAAAGCCGGTGTAAATTCTTTACATGCTTTGTTGGGAAGAGCTGTAGAACACATCAAGGACGACCCAAAGAAAGGTGGGTTCATATCAATATATAATTAGTACTGCACTGATCCTCTTTTTATAATTATTTTTTTTTAAAAAAGTGTGTTTAATTAATTTAAAGGCCGGATTGCGGGAATAATTGAAGAGATAATAAAGAAGTGGGGGGAAGGTAGATTTGAGAAGATATTTCATCGCACGTTTGAAACAACTATTGTAGCAGCTGACGAAAAGCTTCAAATATGGTTTGCTTGTAATTTGTCAACTACAAGAGAGAGAGGTGAAAATGAAACAGTAGCAGCATTTGGTGTTTTATTTGTATCTTCAGCAAAGCTTGCATTCTGGAGTTTCAAACCTACTCCACTACCACATTCCTCCAATGTTAATACACAATCCCTGTATCTCAAGGTACCTACTTTTACTCATTTTCATAAATCAATAAATATAGAAACAAAAGTACTGACACATTTGAGATTCTTGGTAATCCAGTTTCAGTTAAGCAATCTCCACAATAAAATCAACAGTTAACCAAAAAGGGAAACTCTCTTAAAAATATATAATCTGCAAAATAATATAAACTCTCTAAATAGTTAACTCTATTAGGTGAAACACGTATTATTTGTGTGTGGATATCTCTTCTTATATTTATATTTTTTACTAGTTGTTTATTTTGTAATAGTTAAATATATATTCTCTGACAATTCATAGGAGATTAGAAAATCGAACCTCTCCTAACTTGAAGGTTAACATATATACAGAGCTAGCTATTGTTGATGTTGCACAGAAAAAAGAAGGTATATTTTATAAGAAAGTTTTTATTAGTTGAGTATCTCATATAAAAGATACAACAACAGGTAGTTATACCATTTGAGCTACTAAAAGACGTTGAGTATGATGGAGATCAAAAATGCATACGAGTCATCGCCATTGATGACCAGAAATTTGAGTTTATGAATTTCCGGAACTACAATTTCGCTAAAGAAGGCATCCAACAAATTCCACTCGCACCCATTTGGACTCGCTAG TACAAATATATAACACATTTTAAAAGTTATCTCATATTTTTTCAATTTTGATCCCATTGTTAGAAGTATTATTGTGTTCTCTAACTAACTTTTTATCACACCAAAATTTCTGTTTCAGTTTCTTTTTTCTTTTTAATTTTCAAAAGAAACAGTTTTATGTTTTAAAAGAGTAACGACAAGCAAAAACGAATCTACTTGAATGGATAAAGGGATCGTATTGATGAGTGAATGCAATTTTGTTTTCTTTTAAAGTGATACATTTTTATTGCTTAAAATTCAATTTTTTTATATATATAATATTAACACATGTTAGAAAAACTTGGTTTTATTTTTATTATTTTCACATATGTGCCCATCTTTAAATAGAAATATTATGATTTGAATATATTAGTTTTAAGTTAAGCACACACCCTCGTCAACAGTATTGAGTCAAGATGAGATGGGTATTTTGCATAGTTTTATATTCCCACTTCCAATCATCTCCCAAGTTTCTGCTATATCAGTTAATAATTGTATACTTTTGAGAGACAGATCATCGATCTTCAAAATAGGAATGGTGGTGGAGGAATTGTTAGTCGGAGCGGCTTTGGGTGCTTTATTAGGAGAGTTGCTGAAAGGGGTTATGAATTTGATGGAAAAATCCGTTCATTTCAAACCTGAGCTTGAACTACTCAAATCACAGATTGAGTTTTTACAGCCATTAGTGGATCAGGTGGATGAGCTTGGTGAGGATTTCAAGCTTCGCTATTCTGATCAAACCTTGAAGATACTCATACGTAAAGGTAAGCAACTTATTAGAGAATGCAATGATGCTGCCATACAAAATACTCTCTCCAGGTACTTCAAGATTCAACTATGTTACACAAAAGACCTTCGAAGATTGGATGCTGAACTTAAAAGGGCGGGAAGCAATTTGAGGTTGGAATTATACGTACAACAAATGAAGAAATTACAAGCTCTGGAAATTAATTACAATAATGATGGCCGCTATGGTCGAATTCTAGATCGAGCCAAATTAATTGTAACCAGCATCCTTACGCATGTTGGTTACAATTTTACATTTGTAACCAACATCCTCGATAAACTATTTTCGGGCGAGAGTGGGAGTAATAATAATAAATATAATATCAAGCTGCCCTTGCTGTTTTATCACGATCAGAGACTCAAAGGGAAAGCCGGTGTAAATTCTTTACATGCTTTGTTGGGAAGAGCTGTAGAACACATCAAGGACGACCCAAAGAAAGCAAAGCTTGCATTCTGGAGTTTCAAACCTACTCCACTACCACATTCCTCCAATGTTAATACACAATCCCTGTATCTCAAGGTAGTTATACCATTTGAGCTACTAAAAGACGTTGAGTATGATGGAGATCAAAAATGCATACGAGTCATCGCCATTGATGACCAGAAATTTGAGTTTATGAATTTCCGGAACTACAATTTCGCTAAAGAAGGCATCCAACAAATTCCACTCGCACCCATTTGGACTCGCTAG ATGGGTATTTTGCATAGTTTTATATTCCCACTTCCAATCATCTCCCAAGTTTCTGCTATATCAGTTAATAATTGTATACTTTTGAGAGACAGATCATCGATCTTCAAAATAGGAATGGTGGTGGAGGAATTGTTAGTCGGAGCGGCTTTGGGTGCTTTATTAGGAGAGTTGCTGAAAGGGGTTATGAATTTGATGGAAAAATCCGTTCATTTCAAACCTGAGCTTGAACTACTCAAATCACAGATTGAGTTTTTACAGCCATTAGTGGATCAGGTGGATGAGCTTGGTGAGGATTTCAAGCTTCGCTATTCTGATCAAACCTTGAAGATACTCATACGTAAAGGTAAGCAACTTATTAGAGAATGCAATGATGCTGCCATACAAAATACTCTCTCCAGGTACTTCAAGATTCAACTATGTTACACAAAAGACCTTCGAAGATTGGATGCTGAACTTAAAAGGGCGGGAAGCAATTTGAGGTTGGAATTATACGTACAACAAATGAAGAAATTACAAGCTCTGGAAATTAATTACAATAATGATGGCCGCTATGGTCGAATTCTAGATCGAGCCAAATTAATTGTAACCAGCATCCTTACGCATGTTGGTTACAATTTTACATTTGTAACCAACATCCTCGATAAACTATTTTCGGGCGAGAGTGGGAGTAATAATAATAAATATAATATCAAGCTGCCCTTGCTGTTTTATCACGATCAGAGACTCAAAGGGAAAGCCGGTGTAAATTCTTTACATGCTTTGTTGGGAAGAGCTGTAGAACACATCAAGGACGACCCAAAGAAAGCAAAGCTTGCATTCTGGAGTTTCAAACCTACTCCACTACCACATTCCTCCAATGTTAATACACAATCCCTGTATCTCAAGGTAGTTATACCATTTGAGCTACTAAAAGACGTTGAGTATGATGGAGATCAAAAATGCATACGAGTCATCGCCATTGATGACCAGAAATTTGAGTTTATGAATTTCCGGAACTACAATTTCGCTAAAGAAGGCATCCAACAAATTCCACTCGCACCCATTTGGACTCGCTAG MGILHSFIFPLPIISQVSAISVNNCILLRDRSSIFKIGMVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKKAKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFMNFRNYNFAKEGIQQIPLAPIWTR
BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_004142014.2 (PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus] >KGN48500.1 hypothetical protein Csa_6G490150 [Cucumis sativus]) HSP 1 Score: 587.8 bits (1514), Expect = 2.4e-164 Identity = 311/381 (81.63%), Postives = 312/381 (81.89%), Query Frame = 0
BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_008440239.1 (PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo]) HSP 1 Score: 434.5 bits (1116), Expect = 3.4e-118 Identity = 252/382 (65.97%), Postives = 264/382 (69.11%), Query Frame = 0
BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_011657844.1 (PREDICTED: uncharacterized protein LOC105435900 isoform X1 [Cucumis sativus] >KGN48501.1 hypothetical protein Csa_6G490160 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 8.8e-90 Identity = 203/353 (57.51%), Postives = 224/353 (63.46%), Query Frame = 0
BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_008440240.1 (PREDICTED: uncharacterized protein LOC103484756 isoform X1 [Cucumis melo]) HSP 1 Score: 314.7 bits (805), Expect = 4.0e-82 Identity = 202/379 (53.30%), Postives = 222/379 (58.58%), Query Frame = 0
BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_011657845.1 (PREDICTED: uncharacterized protein LOC105435900 isoform X2 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 2.5e-76 Identity = 179/326 (54.91%), Postives = 198/326 (60.74%), Query Frame = 0
BLAST of CsGy6G027320 vs. TAIR10
Match: AT2G22475.1 (GRAM domain family protein) HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05 Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of CsGy6G027320 vs. TAIR10
Match: AT5G66910.1 (Disease resistance protein (CC-NBS-LRR class) family) HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04 Identity = 40/146 (27.40%), Postives = 75/146 (51.37%), Query Frame = 0
BLAST of CsGy6G027320 vs. Swiss-Prot
Match: sp|Q8S8F8|GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04 Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0
BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A0A0KFQ5|A0A0A0KFQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=4 SV=1) HSP 1 Score: 587.8 bits (1514), Expect = 1.6e-164 Identity = 311/381 (81.63%), Postives = 312/381 (81.89%), Query Frame = 0
BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A1S3B0M1|A0A1S3B0M1_CUCME (uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 2.3e-118 Identity = 252/382 (65.97%), Postives = 264/382 (69.11%), Query Frame = 0
BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A0A0KLB1|A0A0A0KLB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490160 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 5.9e-90 Identity = 203/353 (57.51%), Postives = 224/353 (63.46%), Query Frame = 0
BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A1S3B199|A0A1S3B199_CUCME (uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484756 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 2.6e-82 Identity = 202/379 (53.30%), Postives = 222/379 (58.58%), Query Frame = 0
BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A1S4DTB6|A0A1S4DTB6_CUCME (GLABRA2 expression modulator-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484756 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40 Identity = 135/310 (43.55%), Postives = 165/310 (53.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |