CsGy6G027320 (gene) Cucumber (Gy14) v2

NameCsGy6G027320
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionGLABRA2 expression modulator-like isoform X2
LocationChr6 : 26526594 .. 26529042 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAAATATATAACACATTTTAAAAGTTATCTCATATTTTTTCAATTTTGATCCCATTGTTAGAAGTATTATTGTGTTCTCTAACTAACTTTTTATCACACCAAAATTTCTGTTTCAGTTTCTTTTTTCTTTTTAATTTTCAAAAGAAACAGTTTTATGTTTTAAAAGAGTAACGACAAGCAAAAACGAATCTACTTGAATGGATAAAGGGATCGTATTGATGAGTGAATGCAATTTTGTTTTCTTTTAAAGTGATACATTTTTATTGCTTAAAATTCAATTTTTTTATATATATAATATTAACACATGTTAGAAAAACTTGGTTTTATTTTTATTATTTTCACATATGTGCCCATCTTTAAATAGAAATATTATGATTTGAATATATTAGTTTTAAAAAAGGTTAAATTATATAAATCAAAATACTTTTATAAATTTCGGTGGAAAAGGAAAAAGAAAAAGAAAGAGAGAAAGGAAAGTAAGCTTGTAGTTCAAGTTAAGCACACACCCTCGTCAACAGTATTGAGTCAAGATGAGATGGGTATTTTGCATAGTTTTATATTCCCACTTCCAATCATCTCCCAAGTTTCTGCTATATCAGTTAATAATTGTATACTTTTGAGAGACAGATCATCGATCTTCAAAATAGGAATGGTGGTGGAGGAATTGTTAGTCGGAGCGGCTTTGGGTGCTTTATTAGGAGAGTTGCTGAAAGGGGTTATGAATTTGATGGAAAAATCCGTTCATTTCAAACCTGAGCTTGAACTACTCAAATCACAGATTGAGTTTTTACAGCCATTAGTGGATCAGGTGGATGAGCTTGGTGAGGATTTCAAGCTTCGCTATTCTGATCAAACCTTGAAGATACTCATACGTAAAGGTAAGCAACTTATTAGAGAATGCAATGATGCTGCCATACAAAATACTCTCTCCAGGTACTTCAAGATTCAACTATGTTACACAAAAGACCTTCGAAGATTGGATGCTGAACTTAAAAGGGCGGGAAGCAATTTGAGGTTGGAATTATACGTACAACAAATGAAGAAATTACAAGCTCTGGAAATTAATTACAATAATGATGGCCGCTATGGTCGAATTCTAGATCGAGCCAAATTAATTGTAACCAGCATCCTTACGCATGTTGGTTACAATTTTACATTTGTAACCAACATCCTCGATAAACTATTTTCGGGCGAGAGTGGGAGTAATAATAATAAATATAATATCAAGCTGCCCTTGCTGTTTTATCACGATCAGAGACTCAAAGGTAAACTATATATATCGTTATTAATCATCATCATCGCATCATCCTCGTATGTTTTTTTAATTATATATATTAACCATTTTTTGTATGATATTATTAAATTGTATAAATGGGTGTAGGGAAAGCCGGTGTAAATTCTTTACATGCTTTGTTGGGAAGAGCTGTAGAACACATCAAGGACGACCCAAAGAAAGGTGGGTTCATATCAATATATAATTAGTACTGCACTGATCCTCTTTTTATAATTATTTTTTTTTAAAAAAGTGTGTTTAATTAATTTAAAGGCCGGATTGCGGGAATAATTGAAGAGATAATAAAGAAGTGGGGGGAAGGTAGATTTGAGAAGATATTTCATCGCACGTTTGAAACAACTATTGTAGCAGCTGACGAAAAGCTTCAAATATGGTTTGCTTGTAATTTGTCAACTACAAGAGAGAGAGGTGAAAATGAAACAGTAGCAGCATTTGGTGTTTTATTTGTATCTTCAGCAAAGCTTGCATTCTGGAGTTTCAAACCTACTCCACTACCACATTCCTCCAATGTTAATACACAATCCCTGTATCTCAAGGTACCTACTTTTACTCATTTTCATAAATCAATAAATATAGAAACAAAAGTACTGACACATTTGAGATTCTTGGTAATCCAGTTTCAGTTAAGCAATCTCCACAATAAAATCAACAGTTAACCAAAAAGGGAAACTCTCTTAAAAATATATAATCTGCAAAATAATATAAACTCTCTAAATAGTTAACTCTATTAGGTGAAACACGTATTATTTGTGTGTGGATATCTCTTCTTATATTTATATTTTTTACTAGTTGTTTATTTTGTAATAGTTAAATATATATTCTCTGACAATTCATAGGAGATTAGAAAATCGAACCTCTCCTAACTTGAAGGTTAACATATATACAGAGCTAGCTATTGTTGATGTTGCACAGAAAAAAGAAGGTATATTTTATAAGAAAGTTTTTATTAGTTGAGTATCTCATATAAAAGATACAACAACAGGTAGTTATACCATTTGAGCTACTAAAAGACGTTGAGTATGATGGAGATCAAAAATGCATACGAGTCATCGCCATTGATGACCAGAAATTTGAGTTTATGAATTTCCGGAACTACAATTTCGCTAAAGAAGGCATCCAACAAATTCCACTCGCACCCATTTGGACTCGCTAG

mRNA sequence

TACAAATATATAACACATTTTAAAAGTTATCTCATATTTTTTCAATTTTGATCCCATTGTTAGAAGTATTATTGTGTTCTCTAACTAACTTTTTATCACACCAAAATTTCTGTTTCAGTTTCTTTTTTCTTTTTAATTTTCAAAAGAAACAGTTTTATGTTTTAAAAGAGTAACGACAAGCAAAAACGAATCTACTTGAATGGATAAAGGGATCGTATTGATGAGTGAATGCAATTTTGTTTTCTTTTAAAGTGATACATTTTTATTGCTTAAAATTCAATTTTTTTATATATATAATATTAACACATGTTAGAAAAACTTGGTTTTATTTTTATTATTTTCACATATGTGCCCATCTTTAAATAGAAATATTATGATTTGAATATATTAGTTTTAAGTTAAGCACACACCCTCGTCAACAGTATTGAGTCAAGATGAGATGGGTATTTTGCATAGTTTTATATTCCCACTTCCAATCATCTCCCAAGTTTCTGCTATATCAGTTAATAATTGTATACTTTTGAGAGACAGATCATCGATCTTCAAAATAGGAATGGTGGTGGAGGAATTGTTAGTCGGAGCGGCTTTGGGTGCTTTATTAGGAGAGTTGCTGAAAGGGGTTATGAATTTGATGGAAAAATCCGTTCATTTCAAACCTGAGCTTGAACTACTCAAATCACAGATTGAGTTTTTACAGCCATTAGTGGATCAGGTGGATGAGCTTGGTGAGGATTTCAAGCTTCGCTATTCTGATCAAACCTTGAAGATACTCATACGTAAAGGTAAGCAACTTATTAGAGAATGCAATGATGCTGCCATACAAAATACTCTCTCCAGGTACTTCAAGATTCAACTATGTTACACAAAAGACCTTCGAAGATTGGATGCTGAACTTAAAAGGGCGGGAAGCAATTTGAGGTTGGAATTATACGTACAACAAATGAAGAAATTACAAGCTCTGGAAATTAATTACAATAATGATGGCCGCTATGGTCGAATTCTAGATCGAGCCAAATTAATTGTAACCAGCATCCTTACGCATGTTGGTTACAATTTTACATTTGTAACCAACATCCTCGATAAACTATTTTCGGGCGAGAGTGGGAGTAATAATAATAAATATAATATCAAGCTGCCCTTGCTGTTTTATCACGATCAGAGACTCAAAGGGAAAGCCGGTGTAAATTCTTTACATGCTTTGTTGGGAAGAGCTGTAGAACACATCAAGGACGACCCAAAGAAAGCAAAGCTTGCATTCTGGAGTTTCAAACCTACTCCACTACCACATTCCTCCAATGTTAATACACAATCCCTGTATCTCAAGGTAGTTATACCATTTGAGCTACTAAAAGACGTTGAGTATGATGGAGATCAAAAATGCATACGAGTCATCGCCATTGATGACCAGAAATTTGAGTTTATGAATTTCCGGAACTACAATTTCGCTAAAGAAGGCATCCAACAAATTCCACTCGCACCCATTTGGACTCGCTAG

Coding sequence (CDS)

ATGGGTATTTTGCATAGTTTTATATTCCCACTTCCAATCATCTCCCAAGTTTCTGCTATATCAGTTAATAATTGTATACTTTTGAGAGACAGATCATCGATCTTCAAAATAGGAATGGTGGTGGAGGAATTGTTAGTCGGAGCGGCTTTGGGTGCTTTATTAGGAGAGTTGCTGAAAGGGGTTATGAATTTGATGGAAAAATCCGTTCATTTCAAACCTGAGCTTGAACTACTCAAATCACAGATTGAGTTTTTACAGCCATTAGTGGATCAGGTGGATGAGCTTGGTGAGGATTTCAAGCTTCGCTATTCTGATCAAACCTTGAAGATACTCATACGTAAAGGTAAGCAACTTATTAGAGAATGCAATGATGCTGCCATACAAAATACTCTCTCCAGGTACTTCAAGATTCAACTATGTTACACAAAAGACCTTCGAAGATTGGATGCTGAACTTAAAAGGGCGGGAAGCAATTTGAGGTTGGAATTATACGTACAACAAATGAAGAAATTACAAGCTCTGGAAATTAATTACAATAATGATGGCCGCTATGGTCGAATTCTAGATCGAGCCAAATTAATTGTAACCAGCATCCTTACGCATGTTGGTTACAATTTTACATTTGTAACCAACATCCTCGATAAACTATTTTCGGGCGAGAGTGGGAGTAATAATAATAAATATAATATCAAGCTGCCCTTGCTGTTTTATCACGATCAGAGACTCAAAGGGAAAGCCGGTGTAAATTCTTTACATGCTTTGTTGGGAAGAGCTGTAGAACACATCAAGGACGACCCAAAGAAAGCAAAGCTTGCATTCTGGAGTTTCAAACCTACTCCACTACCACATTCCTCCAATGTTAATACACAATCCCTGTATCTCAAGGTAGTTATACCATTTGAGCTACTAAAAGACGTTGAGTATGATGGAGATCAAAAATGCATACGAGTCATCGCCATTGATGACCAGAAATTTGAGTTTATGAATTTCCGGAACTACAATTTCGCTAAAGAAGGCATCCAACAAATTCCACTCGCACCCATTTGGACTCGCTAG

Protein sequence

MGILHSFIFPLPIISQVSAISVNNCILLRDRSSIFKIGMVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKKAKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFMNFRNYNFAKEGIQQIPLAPIWTR
BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_004142014.2 (PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus] >KGN48500.1 hypothetical protein Csa_6G490150 [Cucumis sativus])

HSP 1 Score: 587.8 bits (1514), Expect = 2.4e-164
Identity = 311/381 (81.63%), Postives = 312/381 (81.89%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED
Sbjct: 1   MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 60

Query: 99  FKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSN 158
           FKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSN
Sbjct: 61  FKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSN 120

Query: 159 LRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 218
           LRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS
Sbjct: 121 LRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 180

Query: 219 GESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK---------- 278
           GESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK          
Sbjct: 181 GESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKKGRIAGIIEEI 240

Query: 279 ----------------------------------------------------------AK 338
                                                                     AK
Sbjct: 241 IKKWGEGRFEKIFHRTFETTIVAADEKLQIWFACNLSTTRERGENETVAAFGVLFVSSAK 300

Query: 339 LAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFMNF 352
           LAFWSFKPTPLPHSSNVNTQSLYLKVVIP E+LKDVEYDGDQKCIRVIAIDDQKFEFMNF
Sbjct: 301 LAFWSFKPTPLPHSSNVNTQSLYLKVVIPLEVLKDVEYDGDQKCIRVIAIDDQKFEFMNF 360

BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_008440239.1 (PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo])

HSP 1 Score: 434.5 bits (1116), Expect = 3.4e-118
Identity = 252/382 (65.97%), Postives = 264/382 (69.11%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MV EELLVGAALGALLGELLK V+NLMEK+VHFKPELE LKSQ+EFL PL+DQVDELGED
Sbjct: 1   MVGEELLVGAALGALLGELLKRVLNLMEKTVHFKPELEGLKSQVEFLMPLMDQVDELGED 60

Query: 99  FKLRYSDQT--LKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAG 158
           FKLRYSDQT  LKILI KGKQLI ECN  AIQ+TLSRY KI   YTK LRRLDAELKRA 
Sbjct: 61  FKLRYSDQTLKLKILINKGKQLIEECNYVAIQSTLSRYSKIPR-YTKKLRRLDAELKRAE 120

Query: 159 SNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKL 218
           SNLRLEL VQQM KLQALE NYNN GR GRI DRAKL              FVTNILD L
Sbjct: 121 SNLRLELCVQQM-KLQALENNYNNGGRRGRIRDRAKL--------------FVTNILDNL 180

Query: 219 FSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK-------- 278
           F GESG NNN+Y IKLPLLFYHD+RLKGKAG N + A +GRAVEHIKDDPK+        
Sbjct: 181 FRGESGINNNEYKIKLPLLFYHDRRLKGKAGANFVDAFVGRAVEHIKDDPKEGIEGKIEE 240

Query: 279 ------------------------------------------------------------ 338
                                                                       
Sbjct: 241 KIKKWGEGRFEKIFHRTFETTIVAAEEKLQIWFACNLSTTREKGENIETVAAAGVLFVSS 300

Query: 339 AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFM 351
           AKLAF S KPTP+ HSS VNTQSLYLKVVIPFELLKDVE+DGDQKCIRVIAIDDQKFEFM
Sbjct: 301 AKLAFCSLKPTPVLHSSTVNTQSLYLKVVIPFELLKDVEFDGDQKCIRVIAIDDQKFEFM 360

BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_011657844.1 (PREDICTED: uncharacterized protein LOC105435900 isoform X1 [Cucumis sativus] >KGN48501.1 hypothetical protein Csa_6G490160 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 8.8e-90
Identity = 203/353 (57.51%), Postives = 224/353 (63.46%), Query Frame = 0

Query: 62  MNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLRYSDQTLKILIRKGKQLIRE 121
           MNLMEK+VHF PEL++LKSQIEFLQ L+DQV+ELGEDFKL YSDQ LKILI KGKQLI+E
Sbjct: 1   MNLMEKTVHFTPELQVLKSQIEFLQILMDQVNELGEDFKLLYSDQALKILIHKGKQLIKE 60

Query: 122 CNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLELYVQQMKKLQALEINYNND 181
           CNDA +++TLSRY KI  CYTK  RRLDAELKRA SNLR EL VQQ+KKL AL     ND
Sbjct: 61  CNDAVVRSTLSRYRKIP-CYTKKFRRLDAELKRAESNLRFELCVQQIKKLPAL-----ND 120

Query: 182 GRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFSGESGSNNNKYNIKLPLLFYHDQR 241
           GR GRI D AKLI              VT ILDK+ SGESG NNNKYNIKLPLLFYHDQR
Sbjct: 121 GRNGRIRDPAKLI--------------VTKILDKILSGESGRNNNKYNIKLPLLFYHDQR 180

Query: 242 LKGKAGVNSLHALLGRAVEHIKDDPKK--------------------------------- 301
           LK KAG   + A + RAVEH+KDD K+                                 
Sbjct: 181 LKWKAGAKFVAAFVERAVEHMKDDQKEGIAGRFEEIIKKLGEGRFEKIFHPTFETSIVAG 240

Query: 302 ----------------------------------AKLAFWSFKPTPLPHSSNVNTQSLYL 348
                                             AK+AF SFKPT    SS+VN QSL +
Sbjct: 241 DEKLQISFICNLSTTRERGENETVAAYGVLFVSSAKVAFCSFKPTLRLLSSDVNIQSL-I 300

BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_008440240.1 (PREDICTED: uncharacterized protein LOC103484756 isoform X1 [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 4.0e-82
Identity = 202/379 (53.30%), Postives = 222/379 (58.58%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MV ++LL GAA+GALL +LL  VM L+EK+VHFKPELE LKSQ+ FL  L+DQVDELGED
Sbjct: 1   MVEKDLLGGAAVGALLAQLLNEVMKLIEKAVHFKPELEGLKSQVGFLMRLMDQVDELGED 60

Query: 99  FKLRYSDQT--LKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAG 158
           FKLRY DQT  LKILI KGKQLI ECND AIQ+TLSRY KI   YTK LR+LDAELK A 
Sbjct: 61  FKLRYFDQTLKLKILINKGKQLIEECNDVAIQSTLSRYSKIPR-YTKKLRKLDAELKSAQ 120

Query: 159 SNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKL 218
           SNL L L VQQ   L ALE NYNN+GR                          T ILDK 
Sbjct: 121 SNLMLALSVQQ---LLALERNYNNNGR--------------------------TQILDKR 180

Query: 219 -FSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK------- 278
            F  E GS NN+Y IKLPLLFYHD+RLKGKAG N + A +GRAVEHIKDDPK+       
Sbjct: 181 PFRSEGGSTNNEYKIKLPLLFYHDKRLKGKAGANFVDAFVGRAVEHIKDDPKEGIEGRIE 240

Query: 279 ------------------------------------------------------------ 338
                                                                       
Sbjct: 241 EKIKKWGEGRFEKIFHRTFETTIVAAEEKLHIWFACNLSTTREKGENIETVAVAGVLFVS 300

Query: 339 -AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEF 347
            AKLAF S KPTP            YLKVV+PFELLK  ++D DQK IRVIAIDDQKFEF
Sbjct: 301 SAKLAFCSLKPTP-----------QYLKVVMPFELLKGFKFDEDQKYIRVIAIDDQKFEF 338

BLAST of CsGy6G027320 vs. NCBI nr
Match: XP_011657845.1 (PREDICTED: uncharacterized protein LOC105435900 isoform X2 [Cucumis sativus])

HSP 1 Score: 295.4 bits (755), Expect = 2.5e-76
Identity = 179/326 (54.91%), Postives = 198/326 (60.74%), Query Frame = 0

Query: 89  VDQVDELGEDFKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRL 148
           ++ V+ELGEDFKL YSDQ LKILI KGKQLI+ECNDA +++TLSRY KI  CYTK  RRL
Sbjct: 1   METVNELGEDFKLLYSDQALKILIHKGKQLIKECNDAVVRSTLSRYRKIP-CYTKKFRRL 60

Query: 149 DAELKRAGSNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTF 208
           DAELKRA SNLR EL VQQ+KKL AL     NDGR GRI D AKLI              
Sbjct: 61  DAELKRAESNLRFELCVQQIKKLPAL-----NDGRNGRIRDPAKLI-------------- 120

Query: 209 VTNILDKLFSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK 268
           VT ILDK+ SGESG NNNKYNIKLPLLFYHDQRLK KAG   + A + RAVEH+KDD K+
Sbjct: 121 VTKILDKILSGESGRNNNKYNIKLPLLFYHDQRLKWKAGAKFVAAFVERAVEHMKDDQKE 180

Query: 269 ------------------------------------------------------------ 328
                                                                       
Sbjct: 181 GIAGRFEEIIKKLGEGRFEKIFHPTFETSIVAGDEKLQISFICNLSTTRERGENETVAAY 240

Query: 329 -------AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAID 348
                  AK+AF SFKPT    SS+VN QSL +KVVIP E+LKDVEYDGDQKCIRVIA+D
Sbjct: 241 GVLFVSSAKVAFCSFKPTLRLLSSDVNIQSL-IKVVIPLEVLKDVEYDGDQKCIRVIAVD 300

BLAST of CsGy6G027320 vs. TAIR10
Match: AT2G22475.1 (GRAM domain family protein)

HSP 1 Score: 47.8 bits (112), Expect = 1.6e-05
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0

Query: 269 AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGD-----QKCIRVIAIDDQ 328
           AKLA+ S    PL + +   T+  Y KVVIP   LK V          +K I+VI++D+ 
Sbjct: 213 AKLAYCS--DNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNH 272

Query: 329 KFEFMNFRNYNFAKEGIQ 342
           +F FM F NY+ A   +Q
Sbjct: 273 EFWFMGFLNYDGAVTSLQ 288

BLAST of CsGy6G027320 vs. TAIR10
Match: AT5G66910.1 (Disease resistance protein (CC-NBS-LRR class) family)

HSP 1 Score: 43.1 bits (100), Expect = 4.1e-04
Identity = 40/146 (27.40%), Postives = 75/146 (51.37%), Query Frame = 0

Query: 39  MVVEELL---VGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDEL 98
           MVV + L   +G+  GAL+ E LK +++  +K + FK     L S +E L P++ +++ +
Sbjct: 1   MVVVDWLGLGLGSVAGALVSEGLKVLISEAKKVLAFKSVSNELASTMESLLPVIKEIESM 60

Query: 99  GEDFKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAE-LKR 158
            +  +L    Q LK  I K   L+ +C+     N +     ++  YT+ +  ++ + LK 
Sbjct: 61  QDGMEL----QDLKDTIDKALLLVEKCSHVEKWNII-----LKSKYTRKVEEINRKMLKF 120

Query: 159 AGSNLRLELYVQQMKKLQALEINYNN 181
               L+L L+  Q+K + ++E   NN
Sbjct: 121 CQVQLQLLLFRNQLKSMPSMEAILNN 137

BLAST of CsGy6G027320 vs. Swiss-Prot
Match: sp|Q8S8F8|GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 0

Query: 269 AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGD-----QKCIRVIAIDDQ 328
           AKLA+ S    PL + +   T+  Y KVVIP   LK V          +K I+VI++D+ 
Sbjct: 213 AKLAYCS--DNPLSYKNGDQTEWSYYKVVIPLHQLKAVNPSASIVNPAEKYIQVISVDNH 272

Query: 329 KFEFMNFRNYNFAKEGIQ 342
           +F FM F NY+ A   +Q
Sbjct: 273 EFWFMGFLNYDGAVTSLQ 288

BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A0A0KFQ5|A0A0A0KFQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 1.6e-164
Identity = 311/381 (81.63%), Postives = 312/381 (81.89%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED
Sbjct: 1   MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 60

Query: 99  FKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSN 158
           FKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSN
Sbjct: 61  FKLRYSDQTLKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSN 120

Query: 159 LRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 218
           LRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS
Sbjct: 121 LRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFS 180

Query: 219 GESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK---------- 278
           GESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK          
Sbjct: 181 GESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKKGRIAGIIEEI 240

Query: 279 ----------------------------------------------------------AK 338
                                                                     AK
Sbjct: 241 IKKWGEGRFEKIFHRTFETTIVAADEKLQIWFACNLSTTRERGENETVAAFGVLFVSSAK 300

Query: 339 LAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFMNF 352
           LAFWSFKPTPLPHSSNVNTQSLYLKVVIP E+LKDVEYDGDQKCIRVIAIDDQKFEFMNF
Sbjct: 301 LAFWSFKPTPLPHSSNVNTQSLYLKVVIPLEVLKDVEYDGDQKCIRVIAIDDQKFEFMNF 360

BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A1S3B0M1|A0A1S3B0M1_CUCME (uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 2.3e-118
Identity = 252/382 (65.97%), Postives = 264/382 (69.11%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MV EELLVGAALGALLGELLK V+NLMEK+VHFKPELE LKSQ+EFL PL+DQVDELGED
Sbjct: 1   MVGEELLVGAALGALLGELLKRVLNLMEKTVHFKPELEGLKSQVEFLMPLMDQVDELGED 60

Query: 99  FKLRYSDQT--LKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAG 158
           FKLRYSDQT  LKILI KGKQLI ECN  AIQ+TLSRY KI   YTK LRRLDAELKRA 
Sbjct: 61  FKLRYSDQTLKLKILINKGKQLIEECNYVAIQSTLSRYSKIPR-YTKKLRRLDAELKRAE 120

Query: 159 SNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKL 218
           SNLRLEL VQQM KLQALE NYNN GR GRI DRAKL              FVTNILD L
Sbjct: 121 SNLRLELCVQQM-KLQALENNYNNGGRRGRIRDRAKL--------------FVTNILDNL 180

Query: 219 FSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK-------- 278
           F GESG NNN+Y IKLPLLFYHD+RLKGKAG N + A +GRAVEHIKDDPK+        
Sbjct: 181 FRGESGINNNEYKIKLPLLFYHDRRLKGKAGANFVDAFVGRAVEHIKDDPKEGIEGKIEE 240

Query: 279 ------------------------------------------------------------ 338
                                                                       
Sbjct: 241 KIKKWGEGRFEKIFHRTFETTIVAAEEKLQIWFACNLSTTREKGENIETVAAAGVLFVSS 300

Query: 339 AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFM 351
           AKLAF S KPTP+ HSS VNTQSLYLKVVIPFELLKDVE+DGDQKCIRVIAIDDQKFEFM
Sbjct: 301 AKLAFCSLKPTPVLHSSTVNTQSLYLKVVIPFELLKDVEFDGDQKCIRVIAIDDQKFEFM 360

BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A0A0KLB1|A0A0A0KLB1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490160 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 5.9e-90
Identity = 203/353 (57.51%), Postives = 224/353 (63.46%), Query Frame = 0

Query: 62  MNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGEDFKLRYSDQTLKILIRKGKQLIRE 121
           MNLMEK+VHF PEL++LKSQIEFLQ L+DQV+ELGEDFKL YSDQ LKILI KGKQLI+E
Sbjct: 1   MNLMEKTVHFTPELQVLKSQIEFLQILMDQVNELGEDFKLLYSDQALKILIHKGKQLIKE 60

Query: 122 CNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAGSNLRLELYVQQMKKLQALEINYNND 181
           CNDA +++TLSRY KI  CYTK  RRLDAELKRA SNLR EL VQQ+KKL AL     ND
Sbjct: 61  CNDAVVRSTLSRYRKIP-CYTKKFRRLDAELKRAESNLRFELCVQQIKKLPAL-----ND 120

Query: 182 GRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKLFSGESGSNNNKYNIKLPLLFYHDQR 241
           GR GRI D AKLI              VT ILDK+ SGESG NNNKYNIKLPLLFYHDQR
Sbjct: 121 GRNGRIRDPAKLI--------------VTKILDKILSGESGRNNNKYNIKLPLLFYHDQR 180

Query: 242 LKGKAGVNSLHALLGRAVEHIKDDPKK--------------------------------- 301
           LK KAG   + A + RAVEH+KDD K+                                 
Sbjct: 181 LKWKAGAKFVAAFVERAVEHMKDDQKEGIAGRFEEIIKKLGEGRFEKIFHPTFETSIVAG 240

Query: 302 ----------------------------------AKLAFWSFKPTPLPHSSNVNTQSLYL 348
                                             AK+AF SFKPT    SS+VN QSL +
Sbjct: 241 DEKLQISFICNLSTTRERGENETVAAYGVLFVSSAKVAFCSFKPTLRLLSSDVNIQSL-I 300

BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A1S3B199|A0A1S3B199_CUCME (uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484756 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.6e-82
Identity = 202/379 (53.30%), Postives = 222/379 (58.58%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MV ++LL GAA+GALL +LL  VM L+EK+VHFKPELE LKSQ+ FL  L+DQVDELGED
Sbjct: 1   MVEKDLLGGAAVGALLAQLLNEVMKLIEKAVHFKPELEGLKSQVGFLMRLMDQVDELGED 60

Query: 99  FKLRYSDQT--LKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAG 158
           FKLRY DQT  LKILI KGKQLI ECND AIQ+TLSRY KI   YTK LR+LDAELK A 
Sbjct: 61  FKLRYFDQTLKLKILINKGKQLIEECNDVAIQSTLSRYSKIPR-YTKKLRKLDAELKSAQ 120

Query: 159 SNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKL 218
           SNL L L VQQ   L ALE NYNN+GR                          T ILDK 
Sbjct: 121 SNLMLALSVQQ---LLALERNYNNNGR--------------------------TQILDKR 180

Query: 219 -FSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKK------- 278
            F  E GS NN+Y IKLPLLFYHD+RLKGKAG N + A +GRAVEHIKDDPK+       
Sbjct: 181 PFRSEGGSTNNEYKIKLPLLFYHDKRLKGKAGANFVDAFVGRAVEHIKDDPKEGIEGRIE 240

Query: 279 ------------------------------------------------------------ 338
                                                                       
Sbjct: 241 EKIKKWGEGRFEKIFHRTFETTIVAAEEKLHIWFACNLSTTREKGENIETVAVAGVLFVS 300

Query: 339 -AKLAFWSFKPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEF 347
            AKLAF S KPTP            YLKVV+PFELLK  ++D DQK IRVIAIDDQKFEF
Sbjct: 301 SAKLAFCSLKPTP-----------QYLKVVMPFELLKGFKFDEDQKYIRVIAIDDQKFEF 338

BLAST of CsGy6G027320 vs. TrEMBL
Match: tr|A0A1S4DTB6|A0A1S4DTB6_CUCME (GLABRA2 expression modulator-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484756 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 2.5e-40
Identity = 135/310 (43.55%), Postives = 165/310 (53.23%), Query Frame = 0

Query: 39  MVVEELLVGAALGALLGELLKGVMNLMEKSVHFKPELELLKSQIEFLQPLVDQVDELGED 98
           MV ++LL GAA+GALL +LL  VM L+EK+VHFKPELE LKSQ+ FL  L+DQVDELGED
Sbjct: 1   MVEKDLLGGAAVGALLAQLLNEVMKLIEKAVHFKPELEGLKSQVGFLMRLMDQVDELGED 60

Query: 99  FKLRYSDQT--LKILIRKGKQLIRECNDAAIQNTLSRYFKIQLCYTKDLRRLDAELKRAG 158
           FKLRY DQT  LKILI KGK         A  N +  +    + + KD         + G
Sbjct: 61  FKLRYFDQTLKLKILINKGK---------AGANFVDAFVGRAVEHIKD-------DPKEG 120

Query: 159 SNLRLELYVQQMKKLQALEINYNNDGRYGRILDRAKLIVTSILTHVGYNFTFVTNILDKL 218
              R+E   +++KK          +GR+ +I  R     T +      +  F  N+    
Sbjct: 121 IEGRIE---EKIKKW--------GEGRFEKIFHRT-FETTIVAAEEKLHIWFACNLSTTR 180

Query: 219 FSGESGSNNNKYNIKLPLLFYHDQRLKGKAGVNSLHALLGRAVEHIKDDPKKAKLAFWSF 278
             GE        NI+   +          AGV  +                 AKLAF S 
Sbjct: 181 EKGE--------NIETVAV----------AGVLFV---------------SSAKLAFCSL 238

Query: 279 KPTPLPHSSNVNTQSLYLKVVIPFELLKDVEYDGDQKCIRVIAIDDQKFEFMNFRNYNFA 338
           KPTP            YLKVV+PFELLK  ++D DQK IRVIAIDDQKFEFMNFRNYN A
Sbjct: 241 KPTP-----------QYLKVVMPFELLKGFKFDEDQKYIRVIAIDDQKFEFMNFRNYNVA 238

Query: 339 KEGIQQIPLA 347
           KEGIQ IP+A
Sbjct: 301 KEGIQHIPIA 238

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004142014.22.4e-16481.63PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus] >KGN48500.1 hy... [more]
XP_008440239.13.4e-11865.97PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo][more]
XP_011657844.18.8e-9057.51PREDICTED: uncharacterized protein LOC105435900 isoform X1 [Cucumis sativus] >KG... [more]
XP_008440240.14.0e-8253.30PREDICTED: uncharacterized protein LOC103484756 isoform X1 [Cucumis melo][more]
XP_011657845.12.5e-7654.91PREDICTED: uncharacterized protein LOC105435900 isoform X2 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT2G22475.11.6e-0538.46GRAM domain family protein[more]
AT5G66910.14.1e-0427.40Disease resistance protein (CC-NBS-LRR class) family[more]
Match NameE-valueIdentityDescription
sp|Q8S8F8|GEM_ARATH3.0e-0438.46GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0KFQ5|A0A0A0KFQ5_CUCSA1.6e-16481.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490150 PE=4 SV=1[more]
tr|A0A1S3B0M1|A0A1S3B0M1_CUCME2.3e-11865.97uncharacterized protein LOC103484755 OS=Cucumis melo OX=3656 GN=LOC103484755 PE=... [more]
tr|A0A0A0KLB1|A0A0A0KLB1_CUCSA5.9e-9057.51Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490160 PE=4 SV=1[more]
tr|A0A1S3B199|A0A1S3B199_CUCME2.6e-8253.30uncharacterized protein LOC103484756 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S4DTB6|A0A1S4DTB6_CUCME2.5e-4043.55GLABRA2 expression modulator-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0050832defense response to fungus
Vocabulary: INTERPRO
TermDefinition
IPR039203RPW8_fam
IPR008808Powdery_mildew-R_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050832 defense response to fungus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0043531 ADP binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G027320.1CsGy6G027320.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008808Powdery mildew resistance protein, RPW8 domainPFAMPF05659RPW8coord: 43..162
e-value: 2.7E-16
score: 59.4
IPR008808Powdery mildew resistance protein, RPW8 domainPROSITEPS51153RPW8coord: 39..189
score: 8.644
IPR039203RPW8 familyPANTHERPTHR36766FAMILY NOT NAMEDcoord: 39..171

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G027320Cucumber (Gy14) v2cgybcgybB067
CsGy6G027320Cucumber (Gy14) v2cgybcgybB068
CsGy6G027320Cucumber (Gy14) v2cgybcgybB069
CsGy6G027320Cucurbita maxima (Rimu)cgybcmaB699
CsGy6G027320Cucurbita maxima (Rimu)cgybcmaB848
CsGy6G027320Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G027320Cucurbita moschata (Rifu)cgybcmoB832
CsGy6G027320Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G027320Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G027320Cucurbita pepo (Zucchini)cgybcpeB719
CsGy6G027320Cucurbita pepo (Zucchini)cgybcpeB820
CsGy6G027320Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G027320Cucurbita pepo (Zucchini)cgybcpeB868
CsGy6G027320Cucumber (Chinese Long) v2cgybcuB252
CsGy6G027320Cucumber (Chinese Long) v2cgybcuB253
CsGy6G027320Bottle gourd (USVL1VR-Ls)cgyblsiB388
CsGy6G027320Bottle gourd (USVL1VR-Ls)cgyblsiB389
CsGy6G027320Bottle gourd (USVL1VR-Ls)cgyblsiB422
CsGy6G027320Melon (DHL92) v3.5.1cgybmeB377
CsGy6G027320Melon (DHL92) v3.5.1cgybmeB378
CsGy6G027320Melon (DHL92) v3.5.1cgybmeB414
CsGy6G027320Melon (DHL92) v3.6.1cgybmedB378
CsGy6G027320Melon (DHL92) v3.6.1cgybmedB412
CsGy6G027320Watermelon (Charleston Gray)cgybwcgB390
CsGy6G027320Watermelon (Charleston Gray)cgybwcgB418
CsGy6G027320Watermelon (97103) v1cgybwmB495
CsGy6G027320Watermelon (Charleston Gray)cgybwcgB464
CsGy6G027320Watermelon (97103) v1cgybwmB420
CsGy6G027320Watermelon (97103) v1cgybwmB435
CsGy6G027320Wild cucumber (PI 183967)cgybcpiB260
CsGy6G027320Wild cucumber (PI 183967)cgybcpiB261
CsGy6G027320Silver-seed gourdcarcgybB0198
CsGy6G027320Cucumber (Chinese Long) v3cgybcucB264
CsGy6G027320Cucumber (Chinese Long) v3cgybcucB265
CsGy6G027320Cucumber (Chinese Long) v3cgybcucB308
CsGy6G027320Watermelon (97103) v2cgybwmbB471
CsGy6G027320Watermelon (97103) v2cgybwmbB488
CsGy6G027320Wax gourdcgybwgoB557
CsGy6G027320Wax gourdcgybwgoB576
CsGy6G027320Wax gourdcgybwgoB600