CmoCh03G010070 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGTTGGAGGAATTATTTTGAGGTATTGGTTGAATTTGGAGAAGGCAATAATGGCGGAGGGTCTGGTGAGCGGGGCTGTTCTGGGTGCGTTGTTCGGAGAGGTGCTGAAAGGCATATTGGATTTGGCGGAAAAGAGCATTCATTTCAAACCTGTGGTGGAGGAGATGAGAGGGCAGTTAGAGTTTCTGAGATTAGTGATCCAACAGCTTGATGATGAGCATAGCGGGTTCCTTGATTCCGCGGAAAACACAAGGAGCTTGCGGGGAGTGATAGAGAAAGGGAAGAAACTGATAGGCAAGTGCGAGGGTGTGGATCAAAGTATTCTGAATTATCACAAGGCCCCATTTTACACCAAAAAGCTTCGCCAATTGGATGCTGAATTTGGAAGGGCGTCACAAAATTTGTTGTTGCAATTGAACTTACAGCAGTTGAGGAGGATATCTATGAATGGTAATGGGAGTGACAGTTCTAAATTGTTATTACAGAAGACCATGGAAAAGGTTATGAGCTTTGGTTGCTGTTGTAGCGTCTTCGGTGACCTCCCAAATCAAATCAAATTGCCCTTTCTGTTTTACCACAACAAGCGACTCAAAGGTACACAATTCTACAACACTGAAACGGAATGAACAAGAATGAACTTTGTTGTGCTTACTTGTTATTTTGTTGAGCCAGGAAAAGCGGGTCCAAATCTCGGTGATGCTATGCTGGGTTGGGTGGTCGAGCACATCAAAGACAACATAAACCAAGGTGGGTATGAGATGAAAACTTGGTACCCATGTTTTGATTTGATTGAGTGGGTCAGCAAATTAACGAAATGGGCAATTGTGGTTACATTGGTAGAAGCAGGGAAGAGCAGTGGAGAGGACGATAAAGGGTTGCATAGAAGAGTTGAAGAGGCGATAGAGAGGTTGGGAGATGGTCGGTTTGAGAAGATATTCCATCGGACGTTTGAAACGGTGGCCAATGAGAAGCTTCAAAACTGGTTCCGTTGTGATTTGGAGACGGAAGTTGGTCCTCTCAGAGGGGTTTTGTTTGTATCAACAGTAAAGCTTGCATTCTGCACTAACATCCATACTCCACACCCCAACCTCTATCTAAAGGTACTTCTTCTACTAAATTAAACCCAAAACTGTGCGGAGCTGTTATTACTTAACTATGGTGTTCCACAGGTAATTATACCATTTCAGCTCCTCAAAGGCGTTGGGAGGAACCCCTGCGATCAACAATACATACACTTCATCTCTGTTGATAACCAAAAATTTCAGTTCATCAACTTCCGAAACTACGAGGACGCCAACAAATGCGCGCAACAAATTCCAATAACACTGCCCACATGCACTCGCTGTAGGCTTCAATAAAGGAAAGCTTCAACTTGGACATCCCATCATGTCAGATTTCGTTAGTGTCCGTTGGTGGTTATGAAATTCGTGTGTTCTTTCTGGTGTCCATACCCTTGTAAGGAATAATCTATTTCCCTCTCCAATCGATCTGAGATTTCACAATCTAGCCCCTTGCCCGGTCGTGCTCGTTCAGAGCGTGTTGCCTGTGGCCACATACCCATGTCACTTCGAACCCTTTATGTTATTCTATGTTGTATTGTTTTATTATTGTATTTTCAATATGTATAACTATTTGGCGAAATCTTAATTGCTTCAAAATGTACTATTTGGAGGATGTGACTAGTTGTCTAATTCAACC TTTGGTTGGAGGAATTATTTTGAGGTATTGGTTGAATTTGGAGAAGGCAATAATGGCGGAGGGTCTGGTGAGCGGGGCTGTTCTGGGTGCGTTGTTCGGAGAGGTGCTGAAAGGCATATTGGATTTGGCGGAAAAGAGCATTCATTTCAAACCTGTGGTGGAGGAGATGAGAGGGCAGTTAGAGTTTCTGAGATTAGTGATCCAACAGCTTGATGATGAGCATAGCGGGTTCCTTGATTCCGCGGAAAACACAAGGAGCTTGCGGGGAGTGATAGAGAAAGGGAAGAAACTGATAGGCAAGTGCGAGGGTGTGGATCAAAGTATTCTGAATTATCACAAGGCCCCATTTTACACCAAAAAGCTTCGCCAATTGGATGCTGAATTTGGAAGGGCGTCACAAAATTTGTTGTTGCAATTGAACTTACAGCAGTTGAGGAGGATATCTATGAATGGTAATGGGAGTGACAGTTCTAAATTGTTATTACAGAAGACCATGGAAAAGGTTATGAGCTTTGGTTGCTGTTGTAGCGTCTTCGGTGACCTCCCAAATCAAATCAAATTGCCCTTTCTGTTTTACCACAACAAGCGACTCAAAGGAAAAGCGGGTCCAAATCTCGGTGATGCTATGCTGGGTTGGGTGGTCGAGCACATCAAAGACAACATAAACCAAGGTGGGTATGAGATGAAAACTTGGTACCCATGTTTTGATTTGATTGAGTGGGTCAGCAAATTAACGAAATGGGCAATTGTGGTTACATTGGTAGAAGCAGGGAAGAGCAGTGGAGAGGACGATAAAGGGTTGCATAGAAGAGTTGAAGAGGCGATAGAGAGGTTGGGAGATGGTCGGTTTGAGAAGATATTCCATCGGACGTTTGAAACGGTGGCCAATGAGAAGCTTCAAAACTGGTTCCGTTGTGATTTGGAGACGGAAGTTGGTCCTCTCAGAGGGGTTTTGTTTGTATCAACAGTAAAGCTTGCATTCTGCACTAACATCCATACTCCACACCCCAACCTCTATCTAAAGGTAATTATACCATTTCAGCTCCTCAAAGGCGTTGGGAGGAACCCCTGCGATCAACAATACATACACTTCATCTCTGTTGATAACCAAAAATTTCAGTTCATCAACTTCCGAAACTACGAGGACGCCAACAAATGCGCGCAACAAATTCCAATAACACTGCCCACATGCACTCGCTGTAGGCTTCAATAAAGGAAAGCTTCAACTTGGACATCCCATCATGTCAGATTTCGTTAGTGTCCGTTGGTGGTTATGAAATTCGTGTGTTCTTTCTGGTGTCCATACCCTTGTAAGGAATAATCTATTTCCCTCTCCAATCGATCTGAGATTTCACAATCTAGCCCCTTGCCCGGTCGTGCTCGTTCAGAGCGTGTTGCCTGTGGCCACATACCCATGTCACTTCGAACCCTTTATGTTATTCTATGTTGTATTGTTTTATTATTGTATTTTCAATATGTATAACTATTTGGCGAAATCTTAATTGCTTCAAAATGTACTATTTGGAGGATGTGACTAGTTGTCTAATTCAACC ATGGCGGAGGGTCTGGTGAGCGGGGCTGTTCTGGGTGCGTTGTTCGGAGAGGTGCTGAAAGGCATATTGGATTTGGCGGAAAAGAGCATTCATTTCAAACCTGTGGTGGAGGAGATGAGAGGGCAGTTAGAGTTTCTGAGATTAGTGATCCAACAGCTTGATGATGAGCATAGCGGGTTCCTTGATTCCGCGGAAAACACAAGGAGCTTGCGGGGAGTGATAGAGAAAGGGAAGAAACTGATAGGCAAGTGCGAGGGTGTGGATCAAAGTATTCTGAATTATCACAAGGCCCCATTTTACACCAAAAAGCTTCGCCAATTGGATGCTGAATTTGGAAGGGCGTCACAAAATTTGTTGTTGCAATTGAACTTACAGCAGTTGAGGAGGATATCTATGAATGGTAATGGGAGTGACAGTTCTAAATTGTTATTACAGAAGACCATGGAAAAGGTTATGAGCTTTGGTTGCTGTTGTAGCGTCTTCGGTGACCTCCCAAATCAAATCAAATTGCCCTTTCTGTTTTACCACAACAAGCGACTCAAAGGAAAAGCGGGTCCAAATCTCGGTGATGCTATGCTGGGTTGGGTGGTCGAGCACATCAAAGACAACATAAACCAAGGTGGGTATGAGATGAAAACTTGGTACCCATGTTTTGATTTGATTGAGTGGGTCAGCAAATTAACGAAATGGGCAATTGTGGTTACATTGGTAGAAGCAGGGAAGAGCAGTGGAGAGGACGATAAAGGGTTGCATAGAAGAGTTGAAGAGGCGATAGAGAGGTTGGGAGATGGTCGGTTTGAGAAGATATTCCATCGGACGTTTGAAACGGTGGCCAATGAGAAGCTTCAAAACTGGTTCCGTTGTGATTTGGAGACGGAAGTTGGTCCTCTCAGAGGGGTTTTGTTTGTATCAACAGTAAAGCTTGCATTCTGCACTAACATCCATACTCCACACCCCAACCTCTATCTAAAGGTAATTATACCATTTCAGCTCCTCAAAGGCGTTGGGAGGAACCCCTGCGATCAACAATACATACACTTCATCTCTGTTGATAACCAAAAATTTCAGTTCATCAACTTCCGAAACTACGAGGACGCCAACAAATGCGCGCAACAAATTCCAATAACACTGCCCACATGCACTCGCTGTAGGCTTCAATAA
BLAST of CmoCh03G010070 vs. Swiss-Prot
Match: GEML3_ARATH (Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100 PE=3 SV=2) HSP 1 Score: 96.3 bits (238), Expect = 7.9e-19 Identity = 53/119 (44.54%), Postives = 72/119 (60.50%), Query Frame = 1
BLAST of CmoCh03G010070 vs. Swiss-Prot
Match: GEM_ARATH (GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.9e-18 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
BLAST of CmoCh03G010070 vs. Swiss-Prot
Match: GEML1_ARATH (GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 4.0e-15 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 1
BLAST of CmoCh03G010070 vs. Swiss-Prot
Match: GEML6_ARATH (GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2) HSP 1 Score: 74.3 bits (181), Expect = 3.2e-12 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 1
BLAST of CmoCh03G010070 vs. Swiss-Prot
Match: GEML8_ARATH (Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370 PE=3 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.2e-12 Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TrEMBL
Match: A0A0A0KFQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490150 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.0e-53 Identity = 158/421 (37.53%), Postives = 224/421 (53.21%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TrEMBL
Match: A0A0A0KLB1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G490160 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 8.7e-25 Identity = 70/192 (36.46%), Postives = 116/192 (60.42%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TrEMBL
Match: A0A068U1Q1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036624001 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.2e-21 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TrEMBL
Match: B9T7U5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0408960 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TrEMBL
Match: A0A0A0KIT3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499140 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20 Identity = 58/133 (43.61%), Postives = 79/133 (59.40%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TAIR10
Match: AT2G22475.1 (AT2G22475.1 GRAM domain family protein) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-19 Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TAIR10
Match: AT1G28200.1 (AT1G28200.1 FH interacting protein 1) HSP 1 Score: 84.0 bits (206), Expect = 2.3e-16 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TAIR10
Match: AT4G40100.1 (AT4G40100.1 GRAM domain family protein) HSP 1 Score: 76.3 bits (186), Expect = 4.8e-14 Identity = 46/119 (38.66%), Postives = 62/119 (52.10%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TAIR10
Match: AT5G23350.1 (AT5G23350.1 GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 74.3 bits (181), Expect = 1.8e-13 Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 1
BLAST of CmoCh03G010070 vs. TAIR10
Match: AT5G23370.1 (AT5G23370.1 GRAM domain-containing protein / ABA-responsive protein-related) HSP 1 Score: 73.9 bits (180), Expect = 2.4e-13 Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 1
BLAST of CmoCh03G010070 vs. NCBI nr
Match: gi|659079404|ref|XP_008440239.1| (PREDICTED: uncharacterized protein LOC103484755 [Cucumis melo]) HSP 1 Score: 231.9 bits (590), Expect = 1.9e-57 Identity = 157/403 (38.96%), Postives = 218/403 (54.09%), Query Frame = 1
BLAST of CmoCh03G010070 vs. NCBI nr
Match: gi|659079406|ref|XP_008440240.1| (PREDICTED: uncharacterized protein LOC103484756 [Cucumis melo]) HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56 Identity = 150/384 (39.06%), Postives = 206/384 (53.65%), Query Frame = 1
BLAST of CmoCh03G010070 vs. NCBI nr
Match: gi|778718310|ref|XP_004142014.2| (PREDICTED: uncharacterized protein LOC101219966 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 2.9e-53 Identity = 158/421 (37.53%), Postives = 224/421 (53.21%), Query Frame = 1
BLAST of CmoCh03G010070 vs. NCBI nr
Match: gi|778718303|ref|XP_011657844.1| (PREDICTED: uncharacterized protein LOC105435900 isoform X1 [Cucumis sativus]) HSP 1 Score: 122.9 bits (307), Expect = 1.3e-24 Identity = 70/192 (36.46%), Postives = 116/192 (60.42%), Query Frame = 1
BLAST of CmoCh03G010070 vs. NCBI nr
Match: gi|661894539|emb|CDP01538.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 112.5 bits (280), Expect = 1.7e-21 Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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