Lsi01G006170 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G006170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Histone H1
Location	chr01 : 4940151 .. 4941473 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGAGAAAACACAAAGTCTCTTACATTTTCTTTTCTATGAAAATACAAGGAAAAACAATCCTCTCATTTGTATTTATCCAAATACCTTCTCCCTTCAGGATTTGGATCTCGTGATAACGATCTGTTCTTTTCCACGTGTGCGCTCCAGATCTTTTTTTAGTACAGGTTGGCTATCCGCGTCCACTCGGACTGCCCAATCACAGCTCGTTTTTCCCTCCACGTCCAGATTCTTCTTCCCCTATAACTGCCTCAGAGCAGTCCTCCGTCTCGAGCATATTCGCTGAGCGGTTGTTTCTCGTTCGGTAGTTTGTGAAAATTTTAATCATGTCATCAACCGGAGAGGCTGAAGTGAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCCGAGAAGCCGCCGGTGAAGGAGAAGAAACCTAGGGCTCCGAGGGAGAAGAAGCCAAGGCAGTCTAAAGTTGCTTCACATCCACCGTATTTTCAGGTAATTATGTCTGTTGATGTTTTGATTGTGTTGATTTTGATTGAATGGAGTGAGAATTCTGATGAATTGTAATGTGATTGCAGATGATCAATGAAGCAATCTCGTCGCTCAACGAGAAGAATGGATCGAGTCCGTACGCTATAGCGAAATACATGGAGGAGAAACACAAGGCGGTTCTACCAGCGAATTTCAGGAAAATCTTGGCTCTGCAATTGAAGAATTCCACCGCTAAAGGAAAACTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAATGAAGAAAGAGAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAAACAGGCAAGAACGACAAGAAGTACTGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGTGGCGAGTAAAGCGGTGAAGCCGGTGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAATCAGGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAGAGTAGAGTTCAAACAAGTTGTCTTTGAATCAATCCTCTTTTGTGAATATCTTGCTTATGAATTACGATCATGTAGTGTGTAAATTCTGGGATCTTGTGATCTTTTAGTCTTTGCTTTAATAACTGCAGTGGAAATAAATCCTTTCTTGTTCAGAATTTCAATGTTCTTGATATGATACAATGTTCATATTCATCCTTTCAATTCGAGACACATGGCTCTGGTTTGCTGTTTGAATTAGAAAAGAGAATCAATAGGAACTCCTGGATTTACTTCAA

mRNA sequence

AACAGAGAAAACACAAAGTCTCTTACATTTTCTTTTCTATGAAAATACAAGGAAAAACAATCCTCTCATTTGTATTTATCCAAATACCTTCTCCCTTCAGGATTTGGATCTCGTGATAACGATCTGTTCTTTTCCACGTGTGCGCTCCAGATCTTTTTTTAGTACAGGTTGGCTATCCGCGTCCACTCGGACTGCCCAATCACAGCTCGTTTTTCCCTCCACGTCCAGATTCTTCTTCCCCTATAACTGCCTCAGAGCAGTCCTCCGTCTCGAGCATATTCGCTGAGCGGTTGTTTCTCGTTCGGTAGTTTGTGAAAATTTTAATCATGTCATCAACCGGAGAGGCTGAAGTGAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCCGAGAAGCCGCCGGTGAAGGAGAAGAAACCTAGGGCTCCGAGGGAGAAGAAGCCAAGGCAGTCTAAAGTTGCTTCACATCCACCGTATTTTCAGATGATCAATGAAGCAATCTCGTCGCTCAACGAGAAGAATGGATCGAGTCCGTACGCTATAGCGAAATACATGGAGGAGAAACACAAGGCGGTTCTACCAGCGAATTTCAGGAAAATCTTGGCTCTGCAATTGAAGAATTCCACCGCTAAAGGAAAACTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAATGAAGAAAGAGAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAAACAGGCAAGAACGACAAGAAGTACTGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGTGGCGAGTAAAGCGGTGAAGCCGGTGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAATCAGGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAGAGTAGAGTTCAAACAAGTTGTCTTTGAATCAATCCTCTTTTGTGAATATCTTGCTTATGAATTACGATCATGTAGTGTGTAAATTCTGGGATCTTGTGATCTTTTAGTCTTTGCTTTAATAACTGCAGTGGAAATAAATCCTTTCTTGTTCAGAATTTCAATGTTCTTGATATGATACAATGTTCATATTCATCCTTTCAATTCGAGACACATGGCTCTGGTTTGCTGTTTGAATTAGAAAAGAGAATCAATAGGAACTCCTGGATTTACTTCAA

Coding sequence (CDS)

ATGTCATCAACCGGAGAGGCTGAAGTGAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCCGAGAAGCCGCCGGTGAAGGAGAAGAAACCTAGGGCTCCGAGGGAGAAGAAGCCAAGGCAGTCTAAAGTTGCTTCACATCCACCGTATTTTCAGATGATCAATGAAGCAATCTCGTCGCTCAACGAGAAGAATGGATCGAGTCCGTACGCTATAGCGAAATACATGGAGGAGAAACACAAGGCGGTTCTACCAGCGAATTTCAGGAAAATCTTGGCTCTGCAATTGAAGAATTCCACCGCTAAAGGAAAACTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAATGAAGAAAGAGAAGAACGCAACGAAGGTCGCAAAAGCGAACGCAGAGAAGAAAACTAAACAGGCAAGAACGACAAGAAGTACTGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGTGGCGAGTAAAGCGGTGAAGCCGGTGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAATCAGGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAG

Protein sequence

MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAAKRAKKAVAGM

Homology

[Close]

BLAST of Lsi01G006170 vs. Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.1e-42
Identity = 118/210 (56.19%), Postives = 145/210 (69.05%), Query Frame = 1


Query: 1   MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYF 60
           M++ GE E        P V     E  K  E+ P  +KKPRAP+EKKP+ +K  +HPPYF
Sbjct: 1   MTAIGEVEN-------PTVVQRPTEASKVKEQAPATDKKPRAPKEKKPKSAKAVTHPPYF 60

Query: 61  QMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKAS 120
           QMI EA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKIL LQLKNS AKGKL KIKAS
Sbjct: 61  QMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKAS 120

Query: 121 YKLSETGMKKEKNAT---KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKK 180
           YKLSE G K+    T   K+ KA+++KK +  R T +  +K +  KK    +KA    KK
Sbjct: 121 YKLSEAGKKETTTKTSTKKLPKADSKKKPRSTRATATAAKKTEVPKK----AKATPKPKK 180

Query: 181 VVAKKPKRSTPAKPKQPKSIRAPAAKRAKK 208
           V AK+ ++STPAK KQPKSI++PAAKRAKK
Sbjct: 181 VGAKRTRKSTPAKAKQPKSIKSPAAKRAKK 199

[Close]

BLAST of Lsi01G006170 vs. Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18
Identity = 87/190 (45.79%), Postives = 107/190 (56.32%), Query Frame = 1


Query: 20  EVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPY 79
           EVP  EEPK   +   K K  +  +  KPR    ASHP Y +MI +AI SL EKNGSS Y
Sbjct: 28  EVPEKEEPKAEVEKTKKAKGSKPKKASKPRNP--ASHPTYEEMIKDAIVSLKEKNGSSQY 87

Query: 80  AIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAK 139
           AIAK++EEK K  LPANF+K+L   LK + A GKL K+K S+KLS      +K A    K
Sbjct: 88  AIAKFIEEKQKQ-LPANFKKLLLQNLKKNVASGKLIKVKGSFKLSAAA---KKPAVAKPK 147

Query: 140 ANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRA 199
           A    K K  +   +   K KAV K +VASKA     K VA KPK++  AKPK   +   
Sbjct: 148 AKTAAKAKSVKAKPAAKPKAKAVVKPKVASKA-----KAVAAKPKKAA-AKPKTVAAKTK 205

Query: 200 PAAKRAKKAV 210
           P A + K  V
Sbjct: 208 PTAAKPKAVV 205

[Close]

BLAST of Lsi01G006170 vs. Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 6.9e-17
Identity = 90/211 (42.65%), Postives = 121/211 (57.35%), Query Frame = 1


Query: 7   AEVKVPAEDVPP---VEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMI 66
           A++ VP  +V     V+ PAA   K A+ P   + K   P  KKPR +   +HP Y +M+
Sbjct: 8   ADIPVPQVEVAADAAVDTPAA---KPAKAPKAAKAKKSTPGPKKPRVTP--AHPSYAEMV 67

Query: 67  NEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKL 126
           +EAI++L E++GSS  AI K++E+KHKA LPANFRKIL  Q+K   A GKLTK+K SYKL
Sbjct: 68  SEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKL 127

Query: 127 SET-GMKKEKNATKVAKANAEKKTKQARTT--RSTGRKRKAVKKDEVASKAVKPVKKVVA 186
           ++     K K ATK   A   K    A+ T  +S  +K  A  K +  +KA    K   A
Sbjct: 128 AKAPAAVKPKTATKKKPAAKPKAKAPAKKTAAKSPAKKAAAKPKAKAPAKAKAVAKPKAA 187

Query: 187 KKPKRSTPAKPK-QPKSIRAPAAKRAKKAVA 211
            KPK +  AKPK +  + +APAA   KK  A
Sbjct: 188 AKPKAA--AKPKAKAAAKKAPAAATPKKPAA 211

[Close]

BLAST of Lsi01G006170 vs. Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2)

HSP 1 Score: 86.3 bits (212), Expect = 4.5e-16
Identity = 86/212 (40.57%), Postives = 111/212 (52.36%), Query Frame = 1


Query: 3   STGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQM 62
           +T   E   P  D  P     A     A+    K KK  AP+++        +H PY +M
Sbjct: 2   ATDVTETPAPLVDAAPEAPADAPAAPAADANAAKAKKATAPKKRAS-----PTHLPYAEM 61

Query: 63  INEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYK 122
           ++EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L +QLK   A GKLTK+K SYK
Sbjct: 62  VSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYK 121

Query: 123 LSETGM--KKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVA 182
           LS       K K A K  K  A+K    A+    T  K K   K + A+K    VK    
Sbjct: 122 LSSATKPNPKPKAAPKKPKTGAKKPKAAAKPKAKTPAKAKPATKPKPAAKPKAVVKPKTP 181

Query: 183 KKPKR--STPAKPKQPKSIRAPAAKRAKKAVA 211
            KPK   +  AKPK   +   P AK+A +A A
Sbjct: 182 AKPKAKPAAKAKPKTAGAKPKPLAKKAGRAKA 208

[Close]

BLAST of Lsi01G006170 vs. Swiss-Prot
Match: H11_VOLCA (Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3)

HSP 1 Score: 83.2 bits (204), Expect = 3.8e-15
Identity = 84/216 (38.89%), Postives = 122/216 (56.48%), Query Frame = 1


Query: 1   MSSTGEAEVKVPA-EDVPPVEVPAAEEPK----EAEKPPVKEKKPRAPREKKPRQSKVAS 60
           MS T  A V  PA E  P  E P A+ PK    +  K P   K+P+AP+EKKP+ +   +
Sbjct: 1   MSETEAAPVVAPAAEAAPAAEAPKAKAPKAKAPKQPKAPKAPKEPKAPKEKKPKAAP--T 60

Query: 61  HPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLPANFRKILALQLKNSTAKGKL 120
           HPPY +M+ +AI++L E+NGSS  A+ K++E K+ K +   NF K L+  +K     GKL
Sbjct: 61  HPPYIEMVKDAITTLKERNGSSLPALKKFIENKYGKDIHDKNFAKTLSQVVKTFVKGGKL 120

Query: 121 TKIKASYKLSETGMKKEKNAT-KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAV- 180
            K+K S+KLSE    K K +T K AKA+ E K K+   + +  +K +AVKK +   + V 
Sbjct: 121 VKVKGSFKLSEALKAKAKKSTPKKAKADGEAKPKK---SEAKPKKAEAVKKTKAPKEKVE 180

Query: 181 KPVKKVVAKKPKRSTPAKPKQPKSIRAPAAKRAKKA 209
           +P K+   K  K+    K ++PK    P +   KKA
Sbjct: 181 RPKKEKKEKVEKKKATPKAEKPKKAATPKSAGKKKA 211

[Close]

BLAST of Lsi01G006170 vs. TrEMBL
Match: A0A0A0KJB6_CUCSA (Histone H1 OS=Cucumis sativus GN=Csa_6G505280 PE=3 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.9e-82
Identity = 191/210 (90.95%), Postives = 196/210 (93.33%), Query Frame = 1


Query: 1   MSSTGEA-EVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPY 60
           MSSTGEA EVKVPAEDV PVEVPA EEPKE EKP VKEKKPRA REKKPRQSKVASHPPY
Sbjct: 1   MSSTGEAAEVKVPAEDVAPVEVPATEEPKEVEKP-VKEKKPRATREKKPRQSKVASHPPY 60

Query: 61  FQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA 120
           FQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA
Sbjct: 61  FQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA 120

Query: 121 SYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVV 180
           SYKLSETG KK+ NATKVAKANAEKKTKQARTTR+TGRKRKAVK +E  SKA   VKKVV
Sbjct: 121 SYKLSETGKKKDMNATKVAKANAEKKTKQARTTRTTGRKRKAVKTEEAVSKA---VKKVV 180

Query: 181 AKKPKRSTPAKPKQPKSIRAPAAKRAKKAV 210
           AKKPKRSTPAKPKQPKSI++PAAKRAKKAV
Sbjct: 181 AKKPKRSTPAKPKQPKSIKSPAAKRAKKAV 206

[Close]

BLAST of Lsi01G006170 vs. TrEMBL
Match: B9SZV0_RICCO (Histone h1/h5, putative OS=Ricinus communis GN=RCOM_0292320 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.4e-48
Identity = 138/216 (63.89%), Postives = 161/216 (74.54%), Query Frame = 1


Query: 1   MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYF 60
           M++  EAEV    E  PP    A EE K AEKP VKEKK +AP+EKKP+Q K ASHPPYF
Sbjct: 1   MATDKEAEVAATVEQPPPA---AEEEAKPAEKP-VKEKKTKAPKEKKPKQPKTASHPPYF 60

Query: 61  QMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKAS 120
           QMI EA+ +LNEK+GSSPYAIAKYMEEKHKAVLP+NF+KILALQLKNS A+GKL KI+AS
Sbjct: 61  QMIKEALLTLNEKSGSSPYAIAKYMEEKHKAVLPSNFKKILALQLKNSAARGKLIKIRAS 120

Query: 121 YKLSETGMKKEKNATKVAKA--NAEKKTKQARTTRSTGRKRKAVKKDEVASK-AVKPVKK 180
           YKLSE+  KKEK  TKV KA    +KK KQ +T   + RK ++V K E A K A    KK
Sbjct: 121 YKLSESN-KKEKGTTKVPKAAKGGDKKPKQPKTANVSTRKTRSVNKAEAAKKPAAGATKK 180

Query: 181 VVA-KKPKRSTPAKPKQPKSIRAPAAKRAKKAVAGM 213
           V A KK K++TPAKPKQPKSI++PAAKR KKA   +
Sbjct: 181 VGAPKKTKKTTPAKPKQPKSIKSPAAKRTKKAAVAV 211

[Close]

BLAST of Lsi01G006170 vs. TrEMBL
Match: W9SN28_9ROSA (Histone H1 OS=Morus notabilis GN=L484_026707 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.3e-48
Identity = 125/202 (61.88%), Postives = 152/202 (75.25%), Query Frame = 1


Query: 15  DVPPVEVPAAEE-PKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEK 74
           + P VEVP AE  P E  K PVKEKKPR P+EKKP+Q K ASHPPYF+MI EA++SLN+K
Sbjct: 9   EAPSVEVPLAEPAPVEEPKKPVKEKKPRVPKEKKPKQPKAASHPPYFEMIKEALTSLNDK 68

Query: 75  NGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKN 134
           +GSSPYAIAKYMEEKHKAVLPANF+KILALQLKNS A+GKL KIKASYKLSE G K++  
Sbjct: 69  SGSSPYAIAKYMEEKHKAVLPANFKKILALQLKNSVARGKLIKIKASYKLSEEGKKEKSE 128

Query: 135 ATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVA-----KKPKRSTP 194
             KV+KA+ EKK K+A+ T     ++   +++  ASK  +  KK        K+ K+STP
Sbjct: 129 TGKVSKASTEKKPKEAKMTSQRETRKTTSQRETRASKKPEKAKKTTTAATKKKRSKKSTP 188

Query: 195 AKPKQPKSIRAPAAKRAKKAVA 211
            KPKQPKSI++PAAK+AKK  A
Sbjct: 189 VKPKQPKSIKSPAAKKAKKVAA 210

[Close]

BLAST of Lsi01G006170 vs. TrEMBL
Match: Q9SWA4_TOBAC (Histone H1C OS=Nicotiana tabacum GN=H1c PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.5e-47
Identity = 130/212 (61.32%), Postives = 153/212 (72.17%), Query Frame = 1


Query: 1   MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYF 60
           MS+TGE E   PA + PP E P AE    A K  VKEKKPRAPREKKP+ +K  +HPPYF
Sbjct: 1   MSATGEVEN--PAVEQPPAEAPTAENQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYF 60

Query: 61  QMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKAS 120
           QMI EA+ +LNEK GSSPYAIAKY E+KHK  LPANFRKIL LQLKNS AKGKL KIKAS
Sbjct: 61  QMIKEALLALNEKGGSSPYAIAKYTEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKAS 120

Query: 121 YKLSETGMKKEKNAT--KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKV 180
           YKLSE G K+   A+  KV KA+++KK +  R+  +T +K +  KK ++  K     KKV
Sbjct: 121 YKLSEAGKKERITASTKKVPKADSKKKPRSTRSATATAKKTEVPKKAKLTQKP----KKV 180

Query: 181 VAKKPKRSTPAKPKQPKSIRAPAAKRAKKAVA 211
            AKK K+S PAK KQPKSI++PAAKRAKK  A
Sbjct: 181 GAKKAKKSAPAKAKQPKSIKSPAAKRAKKVAA 206

[Close]

BLAST of Lsi01G006170 vs. TrEMBL
Match: Q8H6B7_TOBAC (Histone H1D OS=Nicotiana tabacum GN=H1d PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.8e-46
Identity = 128/212 (60.38%), Postives = 154/212 (72.64%), Query Frame = 1


Query: 1   MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYF 60
           MS+TG+ E    A + PP + P AE+   A K  VKEKKPRAPREKKP+ +K  +HPPYF
Sbjct: 1   MSATGKVESS--AVEQPPAKAPKAEDQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYF 60

Query: 61  QMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKAS 120
           QMI EA+ +LNEK GSSPYAIAKYME+KHK  LPANFRKIL LQLKNS AKGKL KIKAS
Sbjct: 61  QMIKEALLALNEKGGSSPYAIAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKAS 120

Query: 121 YKLSETGMKKEKNAT--KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKV 180
           YKLS  G K+   A+  KV KA+ +KK +  R+T +T +K +  KK    +K  +  KKV
Sbjct: 121 YKLSVAGKKERTTASTKKVPKADTKKKPRSTRSTTATAKKTEVAKK----AKPTQKPKKV 180

Query: 181 VAKKPKRSTPAKPKQPKSIRAPAAKRAKKAVA 211
            AKK ++STPAK KQPKSI++PAAKRAKK  A
Sbjct: 181 GAKKIRKSTPAKAKQPKSIKSPAAKRAKKVAA 206

[Close]

BLAST of Lsi01G006170 vs. TAIR10
Match: AT2G18050.1 (AT2G18050.1 histone H1-3)

HSP 1 Score: 115.2 bits (287), Expect = 5.1e-26
Identity = 84/173 (48.55%), Postives = 108/173 (62.43%), Query Frame = 1


Query: 41  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI 100
           + P  KKPR+ K  +HPPYFQMI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK 
Sbjct: 9   KTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKT 68

Query: 101 LALQLKNSTAKGKLTKIKASYKLSETGMKKEKNATKVAKANAEKKTKQ--ARTTRSTGRK 160
           L+LQLKNS AKGKL KI+ASYKLS+T     +   K  K N +++ K+   RT  S+ R 
Sbjct: 69  LSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRP 128

Query: 161 RKAVKKDEVASKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAA-KRAKKAVA 211
           +K V                V K+ K+    K +QPKSI++    K+A KA A
Sbjct: 129 KKTVS---------------VNKQEKKRKVKKARQPKSIKSSVGKKKAMKASA 166

[Close]

BLAST of Lsi01G006170 vs. TAIR10
Match: AT1G06760.1 (AT1G06760.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-14
Identity = 86/209 (41.15%), Postives = 107/209 (51.20%), Query Frame = 1


Query: 5   GEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMIN 64
           G      P  D    + PAA+  K      VKEKK  A     P++  V+SHP Y +MI 
Sbjct: 14  GNTAADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAA---PKKRTVSSHPTYEEMIK 73

Query: 65  EAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLS 124
           +AI +L E+ GSS YAI K++EEK K  LP  FRK+L L LK   A GKL K+KAS+KL 
Sbjct: 74  DAIVTLKERTGSSQYAIQKFIEEKRKE-LPPTFRKLLLLNLKRLVASGKLVKVKASFKLP 133

Query: 125 ETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVAKKPK 184
               K         KA AE K+  A+   +T    KA +K   ASKA    KK +A KPK
Sbjct: 134 SASAKASS-----PKAAAE-KSAPAKKKPATVAVTKAKRKVAAASKA----KKTIAVKPK 193

Query: 185 ----RSTPAKPKQPKSIRAPAAKRAKKAV 210
               +   AK K     RA AA   +KAV
Sbjct: 194 TAAAKKVTAKAKAKPVPRATAAATKRKAV 208

[Close]

BLAST of Lsi01G006170 vs. TAIR10
Match: AT2G30620.1 (AT2G30620.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.0e-10
Identity = 78/222 (35.14%), Postives = 107/222 (48.20%), Query Frame = 1


Query: 4   TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMI 63
           +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI
Sbjct: 14  SGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKT----TSSHPTYEEMI 73

Query: 64  NEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKL 123
            +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L + LK   A  KL K+KAS+K+
Sbjct: 74  KDAIVTLKERTGSSQYAIQKFIEEKHKS-LPPTFRKLLLVNLKRLVASEKLVKVKASFKI 133

Query: 124 --------SETGMKKEKNAT-------KVAKANAEKKTKQARTTRSTGRKRKAVKKDEVA 183
                    +     +K AT       KVA A A  K K A    + G K+ A K    A
Sbjct: 134 PSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAA----AKGTKKPAAKVVAKA 193

Query: 184 SKAVKPVKKVVAKKPKRSTPAKPKQPKSIRAPAAKRAKKAVA 211
               KP  KV A KPK  + A   + K++ A    + + A A
Sbjct: 194 KVTAKPKAKVTAAKPKSKSVAAVSKTKAVAAKPKAKERPAKA 226

[Close]

BLAST of Lsi01G006170 vs. TAIR10
Match: AT1G48620.1 (AT1G48620.1 high mobility group A5)

HSP 1 Score: 49.3 bits (116), Expect = 3.4e-06
Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 1


Query: 40  PRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK 99
           P+ P+          SHPPY  MI  AI++LNE +GSS  AI++Y+E  +  + P     
Sbjct: 59  PQQPQTSPVPPHPSISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGI-PTAHGA 118

Query: 100 ILALQLKNSTAKGKLTKIKASYKLSET 127
           +L   LK     G L  +K SYKL+ T
Sbjct: 119 LLTHHLKTLKTSGILVMVKKSYKLAST 144

[Close]

BLAST of Lsi01G006170 vs. TAIR10
Match: AT1G54260.1 (AT1G54260.1 winged-helix DNA-binding transcription factor family protein)

HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06
Identity = 25/68 (36.76%), Postives = 46/68 (67.65%), Query Frame = 1


Query: 59  YFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIK 118
           Y  M+ EA+S++N++NGS+   I +++E +H+  +P NF+K+L+  L    ++ KL K++
Sbjct: 7   YDAMVFEAVSTINDENGSNLKEILRFIEGQHE--VPQNFKKLLSYSLGILVSQDKLKKVR 66

Query: 119 ASYKLSET 127
             YK+S T
Sbjct: 67  NRYKISVT 72

[Close]

BLAST of Lsi01G006170 vs. NCBI nr
Match: gi|449434180|ref|XP_004134874.1| (PREDICTED: histone H1 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 2.8e-82
Identity = 191/210 (90.95%), Postives = 196/210 (93.33%), Query Frame = 1


Query: 1   MSSTGEA-EVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPY 60
           MSSTGEA EVKVPAEDV PVEVPA EEPKE EKP VKEKKPRA REKKPRQSKVASHPPY
Sbjct: 1   MSSTGEAAEVKVPAEDVAPVEVPATEEPKEVEKP-VKEKKPRATREKKPRQSKVASHPPY 60

Query: 61  FQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA 120
           FQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA
Sbjct: 61  FQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA 120

Query: 121 SYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVV 180
           SYKLSETG KK+ NATKVAKANAEKKTKQARTTR+TGRKRKAVK +E  SKA   VKKVV
Sbjct: 121 SYKLSETGKKKDMNATKVAKANAEKKTKQARTTRTTGRKRKAVKTEEAVSKA---VKKVV 180

Query: 181 AKKPKRSTPAKPKQPKSIRAPAAKRAKKAV 210
           AKKPKRSTPAKPKQPKSI++PAAKRAKKAV
Sbjct: 181 AKKPKRSTPAKPKQPKSIKSPAAKRAKKAV 206

[Close]

BLAST of Lsi01G006170 vs. NCBI nr
Match: gi|659080456|ref|XP_008440801.1| (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 310.1 bits (793), Expect = 3.0e-81
Identity = 191/211 (90.52%), Postives = 197/211 (93.36%), Query Frame = 1


Query: 1   MSSTGEA-EVKVPAEDVPPVEV-PAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPP 60
           M+STGEA EVKVPAEDV PVEV PA EEPKE EKP VKEKKPRAPREKKPRQSKVASHPP
Sbjct: 1   MTSTGEAAEVKVPAEDVAPVEVVPATEEPKEVEKP-VKEKKPRAPREKKPRQSKVASHPP 60

Query: 61  YFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIK 120
           YFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIK
Sbjct: 61  YFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIK 120

Query: 121 ASYKLSETGMKKEKNATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKV 180
           ASYKLSE G KK+KNATKVAKANAEK TKQARTTR+TGRKRKAVKK+E  SKA   VKKV
Sbjct: 121 ASYKLSEIGKKKDKNATKVAKANAEKITKQARTTRTTGRKRKAVKKEEAVSKA---VKKV 180

Query: 181 VAKKPKRSTPAKPKQPKSIRAPAAKRAKKAV 210
           VAKKPKRSTPAKPKQPKSI++PAAKRAKKAV
Sbjct: 181 VAKKPKRSTPAKPKQPKSIKSPAAKRAKKAV 207

[Close]

BLAST of Lsi01G006170 vs. NCBI nr
Match: gi|1009144210|ref|XP_015889674.1| (PREDICTED: histone H1 [Ziziphus jujuba])

HSP 1 Score: 202.6 bits (514), Expect = 6.8e-49
Identity = 135/212 (63.68%), Postives = 159/212 (75.00%), Query Frame = 1


Query: 1   MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYF 60
           MS  GE +   PA + PPVE PAAEE K+AEK  VKE+KPRA +E+KP+Q K ASHPPYF
Sbjct: 2   MSVNGEGDA--PAVEAPPVEAPAAEETKKAEKV-VKERKPRATKERKPKQLKTASHPPYF 61

Query: 61  QMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKAS 120
           QMI EA+ SLNEK+GSSPYAIAK++EEKHKAVLPANF+KIL LQLKNS A+GKL KIKAS
Sbjct: 62  QMIKEALLSLNEKSGSSPYAIAKFIEEKHKAVLPANFKKILGLQLKNSAARGKLIKIKAS 121

Query: 121 YKLSETGMKKEKNATKVAKANAEKKTKQART--TRSTGRKRKAVKKDEVASKAVKPVKKV 180
           YKLSE G  K    +KV+K  AEKK KQ +T  T +T    ++ KK E   K  KP    
Sbjct: 122 YKLSEAG--KNDKVSKVSKPTAEKKPKQTKTRSTATTKATTRSAKKPEKTKKVSKP---- 181

Query: 181 VAKKPKRSTPAKPKQPKSIRAPAAKRAKKAVA 211
            AKK K+STPAKPK PKSI++PAAK+AKK+ A
Sbjct: 182 -AKKSKKSTPAKPKPPKSIKSPAAKKAKKSAA 203

[Close]

BLAST of Lsi01G006170 vs. NCBI nr
Match: gi|255581422|ref|XP_002531519.1| (PREDICTED: histone H1 [Ricinus communis])

HSP 1 Score: 200.3 bits (508), Expect = 3.4e-48
Identity = 138/216 (63.89%), Postives = 161/216 (74.54%), Query Frame = 1


Query: 1   MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYF 60
           M++  EAEV    E  PP    A EE K AEKP VKEKK +AP+EKKP+Q K ASHPPYF
Sbjct: 1   MATDKEAEVAATVEQPPPA---AEEEAKPAEKP-VKEKKTKAPKEKKPKQPKTASHPPYF 60

Query: 61  QMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKAS 120
           QMI EA+ +LNEK+GSSPYAIAKYMEEKHKAVLP+NF+KILALQLKNS A+GKL KI+AS
Sbjct: 61  QMIKEALLTLNEKSGSSPYAIAKYMEEKHKAVLPSNFKKILALQLKNSAARGKLIKIRAS 120

Query: 121 YKLSETGMKKEKNATKVAKA--NAEKKTKQARTTRSTGRKRKAVKKDEVASK-AVKPVKK 180
           YKLSE+  KKEK  TKV KA    +KK KQ +T   + RK ++V K E A K A    KK
Sbjct: 121 YKLSESN-KKEKGTTKVPKAAKGGDKKPKQPKTANVSTRKTRSVNKAEAAKKPAAGATKK 180

Query: 181 VVA-KKPKRSTPAKPKQPKSIRAPAAKRAKKAVAGM 213
           V A KK K++TPAKPKQPKSI++PAAKR KKA   +
Sbjct: 181 VGAPKKTKKTTPAKPKQPKSIKSPAAKRTKKAAVAV 211

[Close]

BLAST of Lsi01G006170 vs. NCBI nr
Match: gi|703163539|ref|XP_010113375.1| (Histone H1 [Morus notabilis])

HSP 1 Score: 199.1 bits (505), Expect = 7.6e-48
Identity = 125/202 (61.88%), Postives = 152/202 (75.25%), Query Frame = 1


Query: 15  DVPPVEVPAAEE-PKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEK 74
           + P VEVP AE  P E  K PVKEKKPR P+EKKP+Q K ASHPPYF+MI EA++SLN+K
Sbjct: 9   EAPSVEVPLAEPAPVEEPKKPVKEKKPRVPKEKKPKQPKAASHPPYFEMIKEALTSLNDK 68

Query: 75  NGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGMKKEKN 134
           +GSSPYAIAKYMEEKHKAVLPANF+KILALQLKNS A+GKL KIKASYKLSE G K++  
Sbjct: 69  SGSSPYAIAKYMEEKHKAVLPANFKKILALQLKNSVARGKLIKIKASYKLSEEGKKEKSE 128

Query: 135 ATKVAKANAEKKTKQARTTRSTGRKRKAVKKDEVASKAVKPVKKVVA-----KKPKRSTP 194
             KV+KA+ EKK K+A+ T     ++   +++  ASK  +  KK        K+ K+STP
Sbjct: 129 TGKVSKASTEKKPKEAKMTSQRETRKTTSQRETRASKKPEKAKKTTTAATKKKRSKKSTP 188

Query: 195 AKPKQPKSIRAPAAKRAKKAVA 211
            KPKQPKSI++PAAK+AKK  A
Sbjct: 189 VKPKQPKSIKSPAAKKAKKVAA 210

The following BLAST results are available for this feature:

BLAST of Lsi01G006170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
H1_SOLPN	2.1e-42	56.19	Histone H1 OS=Solanum pennellii PE=2 SV=1	[more]
H1_PEA	1.3e-18	45.79	Histone H1 OS=Pisum sativum PE=2 SV=1	[more]
H1_WHEAT	6.9e-17	42.65	Histone H1 OS=Triticum aestivum PE=2 SV=2	[more]
H1_MAIZE	4.5e-16	40.57	Histone H1 OS=Zea mays PE=2 SV=2	[more]
H11_VOLCA	3.8e-15	38.89	Histone H1-I OS=Volvox carteri GN=H1-I PE=2 SV=3	[more]

BLAST of Lsi01G006170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJB6_CUCSA	1.9e-82	90.95	Histone H1 OS=Cucumis sativus GN=Csa_6G505280 PE=3 SV=1	[more]
B9SZV0_RICCO	2.4e-48	63.89	Histone h1/h5, putative OS=Ricinus communis GN=RCOM_0292320 PE=3 SV=1	[more]
W9SN28_9ROSA	5.3e-48	61.88	Histone H1 OS=Morus notabilis GN=L484_026707 PE=3 SV=1	[more]
Q9SWA4_TOBAC	4.5e-47	61.32	Histone H1C OS=Nicotiana tabacum GN=H1c PE=2 SV=1	[more]
Q8H6B7_TOBAC	3.8e-46	60.38	Histone H1D OS=Nicotiana tabacum GN=H1d PE=2 SV=1	[more]

BLAST of Lsi01G006170 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18050.1	5.1e-26	48.55	histone H1-3	[more]
AT1G06760.1	7.6e-14	41.15	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.1	3.0e-10	35.14	winged-helix DNA-binding transcription factor family protein	[more]
AT1G48620.1	3.4e-06	37.93	high mobility group A5	[more]
AT1G54260.1	7.6e-06	36.76	winged-helix DNA-binding transcription factor family protein	[more]

BLAST of Lsi01G006170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434180\|ref\|XP_004134874.1\|	2.8e-82	90.95	PREDICTED: histone H1 [Cucumis sativus]	[more]
gi\|659080456\|ref\|XP_008440801.1\|	3.0e-81	90.52	PREDICTED: histone H1 [Cucumis melo]	[more]
gi\|1009144210\|ref\|XP_015889674.1\|	6.8e-49	63.68	PREDICTED: histone H1 [Ziziphus jujuba]	[more]
gi\|255581422\|ref\|XP_002531519.1\|	3.4e-48	63.89	PREDICTED: histone H1 [Ricinus communis]	[more]
gi\|703163539\|ref\|XP_010113375.1\|	7.6e-48	61.88	Histone H1 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006334	nucleosome assembly

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus
GO:0000786	nucleosome

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR005819	Histone_H5
IPR005818	Histone_H1/H5_H15

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0009414	response to water deprivation
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0031492	nucleosomal DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G006170.1	Lsi01G006170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..123 score: 2.7
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..120 score: 1.9
IPR005818	Linker histone H1/H5, domain H15	PROFILE	PS51504	H15	coord: 55..125 score: 29
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 147..161 score: 1.6E-9coord: 69..86 score: 1.6E-9coord: 183..200 score: 1.6E-9coord: 42..63 score: 1.
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 52..130 score: 1.5
IPR011991	Winged helix-turn-helix DNA-binding domain	unknown	SSF46785	"Winged helix" DNA-binding domain	coord: 54..135 score: 2.01
None	No IPR available	PANTHER	PTHR11467	HISTONE H1/H5	coord: 1..210 score: 1.3
None	No IPR available	PANTHER	PTHR11467:SF50	HISTONE H1	coord: 1..210 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G006170	Csa6G505280	Cucumber (Chinese Long) v2	culsiB434
Lsi01G006170	CSPI06G31630	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G006170	Cucsa.043430	Cucumber (Gy14) v1	cgylsiB022
Lsi01G006170	CmaCh03G006980	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G006170	CmoCh03G007250	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G006170	Cla014270	Watermelon (97103) v1	lsiwmB144
Lsi01G006170	MELO3C007889	Melon (DHL92) v3.5.1	lsimeB156
Lsi01G006170	ClCG01G020160	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G006170	MELO3C007889.2	Melon (DHL92) v3.6.1	lsimedB163
Lsi01G006170	Cla97C01G019560	Watermelon (97103) v2	lsiwmbB115
Lsi01G006170	Bhi03G000655	Wax gourd	lsiwgoB168
Lsi01G006170	Cp4.1LG10g00350	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G006170	CsGy6G031150	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G006170	Carg00602	Silver-seed gourd	carlsiB364
Lsi01G006170	CsaV3_6G046960	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G006170	Cucumber (Chinese Long) v3	cuclsiB119
Lsi01G006170	Cucumber (Chinese Long) v3	cuclsiB187
Lsi01G006170	Watermelon (97103) v2	lsiwmbB144
Lsi01G006170	Watermelon (97103) v2	lsiwmbB149
Lsi01G006170	Bottle gourd (USVL1VR-Ls)	lsilsiB032
Lsi01G006170	Bottle gourd (USVL1VR-Ls)	lsilsiB078
Lsi01G006170	Bottle gourd (USVL1VR-Ls)	lsilsiB085
Lsi01G006170	Cucumber (Gy14) v1	cgylsiB547
Lsi01G006170	Cucurbita maxima (Rimu)	cmalsiB013
Lsi01G006170	Cucurbita maxima (Rimu)	cmalsiB163
Lsi01G006170	Cucurbita maxima (Rimu)	cmalsiB407
Lsi01G006170	Cucurbita maxima (Rimu)	cmalsiB565
Lsi01G006170	Cucurbita maxima (Rimu)	cmalsiB720
Lsi01G006170	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G006170	Cucurbita moschata (Rifu)	cmolsiB001
Lsi01G006170	Cucurbita moschata (Rifu)	cmolsiB152
Lsi01G006170	Cucurbita moschata (Rifu)	cmolsiB393
Lsi01G006170	Cucurbita moschata (Rifu)	cmolsiB710
Lsi01G006170	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G006170	Cucurbita pepo (Zucchini)	cpelsiB237
Lsi01G006170	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G006170	Cucurbita pepo (Zucchini)	cpelsiB439
Lsi01G006170	Wild cucumber (PI 183967)	cpilsiB107
Lsi01G006170	Wild cucumber (PI 183967)	cpilsiB170
Lsi01G006170	Cucumber (Chinese Long) v2	culsiB109
Lsi01G006170	Cucumber (Chinese Long) v2	culsiB171
Lsi01G006170	Melon (DHL92) v3.5.1	lsimeB132
Lsi01G006170	Melon (DHL92) v3.5.1	lsimeB142
Lsi01G006170	Watermelon (Charleston Gray)	lsiwcgB151
Lsi01G006170	Watermelon (97103) v1	lsiwmB132
Lsi01G006170	Watermelon (97103) v1	lsiwmB140
Lsi01G006170	Watermelon (97103) v1	lsiwmB168
Lsi01G006170	Cucumber (Gy14) v2	cgyblsiB098
Lsi01G006170	Melon (DHL92) v3.6.1	lsimedB140
Lsi01G006170	Melon (DHL92) v3.6.1	lsimedB148
Lsi01G006170	Silver-seed gourd	carlsiB585
Lsi01G006170	Silver-seed gourd	carlsiB892