Lsi01G004830 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi01G004830
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	U-box domain-containing protein 4
Location	chr01 : 4011190 .. 4014339 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCCAACTTTCCGTTATTAAAATGGCCTGTGACCATTCCAACCATACAAACCCTCGTAGCTCTATCGAAACCCAGATTCCAAAGTTGTAGTAGTAAATGTAAAACCACACTCATTCAGAAAGCAAATATACCTCTTCTCTTCCGCCATCATATTCCTTTCTTTCTCTTTCTCTTTCTTCCTTTCTTCTCCGGCCATGAAATTTTCTCGAGAAACAAACTGAAATTGTAATTTAGGGGTTTTGAAGTGAGATTTATATTTACTGTTTTGGAAATGGTGTCGCTTGAGGATTCTCATTCCACTTCTAATCGGTTTCCTTTGAGCAGAAATTGTTACAGTCCGTTGTCTACTACTTCCAGTAAAATCAGCAGGAACATTGGCCGTTCTATGCGTACTATTCGCTCTAATTTCTTCCAAGATGATAATAGTTGCACCTTTAATGGCTCTGTGGCAGCAAAATCCGGCTGTCTCTCTGAGAATCTCACTGATTCTGTCATCGACCTCAGGCTTGGCGAGTTGGCATCGCGTAGCCCTAAATGGCCTAATAAGCAATCCTCTGAACAGGAACAGGATTTTCTTGAACTTTCTCATGCTTTCAGTGATTTCTCTGCTTGTAGCAGTGACATTTCCGGAGAGTTGCAGAGACTTGCAAGTTTACCCTCTATGGCCGTTGTTCCTAAAAGAGAAGGTGAAGATGCTGACCCCGAGCCCGAACCTTGCTTAGGGTTTTTGCAGAGGGAGAATTTCTCCACTGAGATTATTGAGAGTATTTCGCCTGAAGATCTACAGCCGACTGTCAAGATCTGCATCGATGGGCTCCAGTCCTCGTCAATTGCAGTCAAGCGATCTGCGGCGGCTAAGCTGAGGCTTCTGGCGAAGAATCGGTCTGATAATCGGGTACTCATTGGGGAGTCCGGGGCTGTTCCTGCGTTAATTCCTTTGCTTCGATCTACCGATCCATGGACACAAGAGCACGCTGTAACTGCCTTGCTCAATCTCTCACTCCACGAGTCTAATAAAGTCATCATCACGAATGCTGGAGCCATAAAGTCGCTGGTTTATGCGCTCAAAACTGGCACCGAAACTTCGAAACAGAATGCGGCTTGTGCTCTGATGAGCCTCGCTTTGTTGGAGGAAAATAAGACTTCGATTGGGGTTTGTGGGGCCATTCCACCTCTGGTATCTTTGCTACTGAATGGATCGAATAGAGGGAAAAAAGACGCGCTCACGACGCTCTACAAGCTTTGCTCGATCAAACCGAACAAGGAACGGGCCGTCACTGCAGGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCAGAGCAAGGCACAGGTTTGGCAGAGAAAGCGATGGTGGTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGATCGGTGAAAGGGAAAGAGTTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATAGAGGGTTGCTCGTAAGGGAAGGTGGAATTCCACCTCTGGTTGCACTTTCGCAGACTGGAAGCGTTCGAGCAAAGCATAAGGTGATTACCAAAAACTGATTAGTCACCAATTATTACACGATTCTCGTTTACTAATTCTATGTAATGATCACCTTGTTGATGGCAATTTGTTAATTTTTGCAGGCAGAAACGCTTCTGGGGTATTTAAGAGAACCAAGGCAAGAAGCATCCTCATCAAGTCCTTAACAGAAGGCCTGAGATGGGTTTTTTTTAGAAGGTAATTGTATTATTAAGTAGTGGTACCGTGGTTGCTGTATATAGGGAGTGGTTTTTTTGATGGTTTGTACAGCGTGGTTGAGAATGTTGGAAGAATGAAGATCGTAGAATGAAGTAGTGCAGTTAGTAAAGCCAAAAACTGACGGTTAGAGAACAAGATGTATGATTTTTAACTAGGTTCTGGGATATCCTTTTTAATGACATTCCGTTTTACTAAATAGTGGAGTATCACTTGGTTTGCTTTTCTGGGTTTGGGGATTTGATGAAATTCTGATTGGTTGTGTGTCTTGTATTATGTGGAACTGATCGTCTTGTTTTACATATTAAAAGCTGGGAATTGCACAAATTTTGTAAATTCAGTGTGTTGGATGCTCAGCACAAGTTAATATTTCTCTTTCTTCTCCTTTACTTGTGATTGAAACTTCACTGGGTTCAGTGGTGTGAGAAGCTTGAAGTTCCTATTCATACGAAAGAAGAAAAATCTGCTTCATCTATATATTATATTAAAAAAGAAAAAAGAGAGAAGTTTGTTGAGCGAAGGGAAGGAAAATGATGTGTGTATTACTTGGTAGGGTGTTGATTTTGGTAAGAAATATCTCATCTTTCTTGCCCTACTTGCAATTGCATGAACATATGAACATCATCATCTCAGGCGAAGGCCACAGGCTGGGTGGTGTGGATGCCCCACCATAGATTTAGAAATATTTTGTAGGGTTTTGGGTCTCTTACTGCGTCTTGTCGTTTAGGGGTGAATTATTAGTTGGCAGAGCAGGTTTGTTTTTGTCCTGCCGCTGCTTGCTGTGCTGTTCATCATTTGCTATTTCTATTCAAATTCTCCTCTCTTTGAACCAATTTTTTACACAACCCAACTGTCGGTGTCCTTCAGCTGAAGGGCACCCCCTCCTTACAAAGTCTCCCCATCTCTCTCTGTGCCTTGTTGTTATTATTATTATTATTATCATCATCATTTCTTTAACGTTAGTTGAGCTGTATTAGAACGGCCTTTCCTTTCCTTTCCTTTCATCTAAAGCAAACAAAAGGTTCCACAGTTACAATCTTTCAATTCTTTCCTTTTCCATTTCTATTCGAGTTCATTTAATGATCGTTTCATTACTCTCTCCATTTCACTATATTAAAGTAACCAACTAGTAAGAAGAAAAGACAATAAAGCAAGAGTTGCAAGTGGATAAAGTTAATAAATAATATAACCAATCATGCATTGTTGTCGTCCACAATTTATTCCAACTTACCAAAAGTTTCTCATAAGGAACACGAAGAGAAACATCAAGTGTAGTTAAATAAAAGTTCACGTCAATTCTGCTGAAGATTATAAACTTAAAGACAGTCAAAAGTAAAGAATCATT

mRNA sequence

GCCCAACTTTCCGTTATTAAAATGGCCTGTGACCATTCCAACCATACAAACCCTCGTAGCTCTATCGAAACCCAGATTCCAAAGTTGTAGTAGTAAATGTAAAACCACACTCATTCAGAAAGCAAATATACCTCTTCTCTTCCGCCATCATATTCCTTTCTTTCTCTTTCTCTTTCTTCCTTTCTTCTCCGGCCATGAAATTTTCTCGAGAAACAAACTGAAATTGTAATTTAGGGGTTTTGAAGTGAGATTTATATTTACTGTTTTGGAAATGGTGTCGCTTGAGGATTCTCATTCCACTTCTAATCGGTTTCCTTTGAGCAGAAATTGTTACAGTCCGTTGTCTACTACTTCCAGTAAAATCAGCAGGAACATTGGCCGTTCTATGCGTACTATTCGCTCTAATTTCTTCCAAGATGATAATAGTTGCACCTTTAATGGCTCTGTGGCAGCAAAATCCGGCTGTCTCTCTGAGAATCTCACTGATTCTGTCATCGACCTCAGGCTTGGCGAGTTGGCATCGCGTAGCCCTAAATGGCCTAATAAGCAATCCTCTGAACAGGAACAGGATTTTCTTGAACTTTCTCATGCTTTCAGTGATTTCTCTGCTTGTAGCAGTGACATTTCCGGAGAGTTGCAGAGACTTGCAAGTTTACCCTCTATGGCCGTTGTTCCTAAAAGAGAAGGTGAAGATGCTGACCCCGAGCCCGAACCTTGCTTAGGGTTTTTGCAGAGGGAGAATTTCTCCACTGAGATTATTGAGAGTATTTCGCCTGAAGATCTACAGCCGACTGTCAAGATCTGCATCGATGGGCTCCAGTCCTCGTCAATTGCAGTCAAGCGATCTGCGGCGGCTAAGCTGAGGCTTCTGGCGAAGAATCGGTCTGATAATCGGGTACTCATTGGGGAGTCCGGGGCTGTTCCTGCGTTAATTCCTTTGCTTCGATCTACCGATCCATGGACACAAGAGCACGCTGTAACTGCCTTGCTCAATCTCTCACTCCACGAGTCTAATAAAGTCATCATCACGAATGCTGGAGCCATAAAGTCGCTGGTTTATGCGCTCAAAACTGGCACCGAAACTTCGAAACAGAATGCGGCTTGTGCTCTGATGAGCCTCGCTTTGTTGGAGGAAAATAAGACTTCGATTGGGGTTTGTGGGGCCATTCCACCTCTGGTATCTTTGCTACTGAATGGATCGAATAGAGGGAAAAAAGACGCGCTCACGACGCTCTACAAGCTTTGCTCGATCAAACCGAACAAGGAACGGGCCGTCACTGCAGGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCAGAGCAAGGCACAGGTTTGGCAGAGAAAGCGATGGTGGTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGATCGGTGAAAGGGAAAGAGTTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATAGAGGGTTGCTCGTAAGGGAAGGTGGAATTCCACCTCTGGTTGCACTTTCGCAGACTGGAAGCGTTCGAGCAAAGCATAAGGCAGAAACGCTTCTGGGGTATTTAAGAGAACCAAGGCAAGAAGCATCCTCATCAAGTCCTTAACAGAAGGCCTGAGATGGGTTTTTTTTAGAAGGTAATTGTATTATTAAGTAGTGGTACCGTGGTTGCTGTATATAGGGAGTGGTTTTTTTGATGGTTTGTACAGCGTGGTTGAGAATGTTGGAAGAATGAAGATCGTAGAATGAAGTAGTGCAGTTAGTAAAGCCAAAAACTGACGGTTAGAGAACAAGATGTATGATTTTTAACTAGGTTCTGGGATATCCTTTTTAATGACATTCCGTTTTACTAAATAGTGGAGTATCACTTGGTTTGCTTTTCTGGGTTTGGGGATTTGATGAAATTCTGATTGGTTGTGTGTCTTGTATTATGTGGAACTGATCGTCTTGTTTTACATATTAAAAGCTGGGAATTGCACAAATTTTGTAAATTCAGTGTGTTGGATGCTCAGCACAAGTTAATATTTCTCTTTCTTCTCCTTTACTTGTGATTGAAACTTCACTGGGTTCAGTGGTGTGAGAAGCTTGAAGTTCCTATTCATACGAAAGAAGAAAAATCTGCTTCATCTATATATTATATTAAAAAAGAAAAAAGAGAGAAGTTTGTTGAGCGAAGGGAAGGAAAATGATGTGTGTATTACTTGGTAGGGTGTTGATTTTGGTAAGAAATATCTCATCTTTCTTGCCCTACTTGCAATTGCATGAACATATGAACATCATCATCTCAGGCGAAGGCCACAGGCTGGGTGGTGTGGATGCCCCACCATAGATTTAGAAATATTTTGTAGGGTTTTGGGTCTCTTACTGCGTCTTGTCGTTTAGGGGTGAATTATTAGTTGGCAGAGCAGGTTTGTTTTTGTCCTGCCGCTGCTTGCTGTGCTGTTCATCATTTGCTATTTCTATTCAAATTCTCCTCTCTTTGAACCAATTTTTTACACAACCCAACTGTCGGTGTCCTTCAGCTGAAGGGCACCCCCTCCTTACAAAGTCTCCCCATCTCTCTCTGTGCCTTGTTGTTATTATTATTATTATTATCATCATCATTTCTTTAACGTTAGTTGAGCTGTATTAGAACGGCCTTTCCTTTCCTTTCCTTTCATCTAAAGCAAACAAAAGGTTCCACAGTTACAATCTTTCAATTCTTTCCTTTTCCATTTCTATTCGAGTTCATTTAATGATCGTTTCATTACTCTCTCCATTTCACTATATTAAAGTAACCAACTAGTAAGAAGAAAAGACAATAAAGCAAGAGTTGCAAGTGGATAAAGTTAATAAATAATATAACCAATCATGCATTGTTGTCGTCCACAATTTATTCCAACTTACCAAAAGTTTCTCATAAGGAACACGAAGAGAAACATCAAGTGTAGTTAAATAAAAGTTCACGTCAATTCTGCTGAAGATTATAAACTTAAAGACAGTCAAAAGTAAAGAATCATT

Coding sequence (CDS)

ATGGTGTCGCTTGAGGATTCTCATTCCACTTCTAATCGGTTTCCTTTGAGCAGAAATTGTTACAGTCCGTTGTCTACTACTTCCAGTAAAATCAGCAGGAACATTGGCCGTTCTATGCGTACTATTCGCTCTAATTTCTTCCAAGATGATAATAGTTGCACCTTTAATGGCTCTGTGGCAGCAAAATCCGGCTGTCTCTCTGAGAATCTCACTGATTCTGTCATCGACCTCAGGCTTGGCGAGTTGGCATCGCGTAGCCCTAAATGGCCTAATAAGCAATCCTCTGAACAGGAACAGGATTTTCTTGAACTTTCTCATGCTTTCAGTGATTTCTCTGCTTGTAGCAGTGACATTTCCGGAGAGTTGCAGAGACTTGCAAGTTTACCCTCTATGGCCGTTGTTCCTAAAAGAGAAGGTGAAGATGCTGACCCCGAGCCCGAACCTTGCTTAGGGTTTTTGCAGAGGGAGAATTTCTCCACTGAGATTATTGAGAGTATTTCGCCTGAAGATCTACAGCCGACTGTCAAGATCTGCATCGATGGGCTCCAGTCCTCGTCAATTGCAGTCAAGCGATCTGCGGCGGCTAAGCTGAGGCTTCTGGCGAAGAATCGGTCTGATAATCGGGTACTCATTGGGGAGTCCGGGGCTGTTCCTGCGTTAATTCCTTTGCTTCGATCTACCGATCCATGGACACAAGAGCACGCTGTAACTGCCTTGCTCAATCTCTCACTCCACGAGTCTAATAAAGTCATCATCACGAATGCTGGAGCCATAAAGTCGCTGGTTTATGCGCTCAAAACTGGCACCGAAACTTCGAAACAGAATGCGGCTTGTGCTCTGATGAGCCTCGCTTTGTTGGAGGAAAATAAGACTTCGATTGGGGTTTGTGGGGCCATTCCACCTCTGGTATCTTTGCTACTGAATGGATCGAATAGAGGGAAAAAAGACGCGCTCACGACGCTCTACAAGCTTTGCTCGATCAAACCGAACAAGGAACGGGCCGTCACTGCAGGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCAGAGCAAGGCACAGGTTTGGCAGAGAAAGCGATGGTGGTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGATCGGTGAAAGGGAAAGAGTTTGCAGTGTTGACACTCTTGCAATTGTGTGTTGAGAGTGTGAGAAATAGAGGGTTGCTCGTAAGGGAAGGTGGAATTCCACCTCTGGTTGCACTTTCGCAGACTGGAAGCGTTCGAGCAAAGCATAAGGCAGAAACGCTTCTGGGGTATTTAAGAGAACCAAGGCAAGAAGCATCCTCATCAAGTCCTTAA

Protein sequence

MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVAAKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDISGELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP

Homology

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BLAST of Lsi01G004830 vs. Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3)

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-67
Identity = 165/387 (42.64%), Postives = 239/387 (61.76%), Query Frame = 1


Query: 85  RSPKWPNKQSSEQ--EQDFLELSHAFSDFSACSSDISGELQRLASLPSMAVVPKREGEDA 144
           RSP   +  S+E+    D  E S   +  +  SSD SGE++      + +   +R+  D 
Sbjct: 440 RSPSATSTVSNEEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDF 499

Query: 145 DPEPEPCLGFLQR-----------ENFSTEIIESISPE------DLQPTVKICIDGLQSS 204
            P+      F+ R           E   + I+ + S E      +++  VK  ++ L+SS
Sbjct: 500 SPK------FMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSS 559

Query: 205 SIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNLSLH 264
           S+  +R A A+LRLLAK+  DNR++IG SGA+  L+ LL STD  TQE+AVTALLNLS++
Sbjct: 560 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSIN 619

Query: 265 ESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIPPLVSL 324
           ++NK  I +AGAI+ L++ L+ G+  +K+N+A  L SL+++EENK  IG  GAI PLV L
Sbjct: 620 DNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDL 679

Query: 325 LLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMVVLSSL 384
           L NG+ RGKKDA T L+ L   + NK   V +GAV+ L+ L+ +   G+ +KA+ VL++L
Sbjct: 680 LGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANL 739

Query: 385 AGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVREGGIPP 444
           A I EG++AI +EGGI  LVE +E GS +GKE A   LLQL   S R   ++++EG +PP
Sbjct: 740 ATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPP 799

Query: 445 LVALSQTGSVRAKHKAETLLGYLREPR 453
           LVALSQ+G+ RA+ KA+ LL Y R  R
Sbjct: 800 LVALSQSGTPRAREKAQALLSYFRNQR 819

[Close]

BLAST of Lsi01G004830 vs. Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-63
Identity = 144/291 (49.48%), Postives = 197/291 (67.70%), Query Frame = 1


Query: 164 ESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPL 223
           E+ S   ++  VK  ID L+SSS+  +R A A++R+LA+N +DNR++I    A+P+L+ L
Sbjct: 412 ETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSL 471

Query: 224 LRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTG-TETSKQNAACALMS 283
           L STD   Q  AVT LLNLS++++NK +I  +GAI  L++ LKTG  E +K N+A  L S
Sbjct: 472 LYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFS 531

Query: 284 LALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKP 343
           L+++EE KT IG  GAI PLV LL +GS  GKKDA T L+ L     NK + + AGAV+ 
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRY 591

Query: 344 LVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLT 403
           LV L+ +   G+ EKA+VVL++LA ++EGK AI EEGGI  LVE +E GS +GKE A   
Sbjct: 592 LVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAA 651

Query: 404 LLQLCVESVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ 454
           LLQLC  S +    ++REG IPPLVAL+++G+ R K KA+ LL Y +  RQ
Sbjct: 652 LLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQ 701

[Close]

BLAST of Lsi01G004830 vs. Swiss-Prot
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 7.4e-56
Identity = 135/280 (48.21%), Postives = 187/280 (66.79%), Query Frame = 1


Query: 174 TVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQE 233
           T+K+ ++ L+S S  VK +AAA++R L  N  +NRV IG  GA+  L+ LL S +  TQE
Sbjct: 474 TIKL-VEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQE 533

Query: 234 HAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSI 293
           HAVTALLNLS+ E NK +I   GAI+ LV+ L TG + +K+N+A +L SL++L+ N+  I
Sbjct: 534 HAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERI 593

Query: 294 GVC-GAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGT 353
           G    AI  LV+LL  G+ RGKKDA + L+ L     NK R V A AVK LV L+ +   
Sbjct: 594 GQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDL 653

Query: 354 GLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVR 413
            + +KA+ +L++L+ + EG+ AIV EGGI  LVE ++ GS +GKE A   LLQLC+ S +
Sbjct: 654 EMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPK 713

Query: 414 NRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPR 453
              L+++EG IPPLVALSQ+G+ RAK KA+ LL + R  R
Sbjct: 714 FCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQR 751

[Close]

BLAST of Lsi01G004830 vs. Swiss-Prot
Match: PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.8e-55
Identity = 129/302 (42.72%), Postives = 186/302 (61.59%), Query Frame = 1


Query: 159 STEIIESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVP 218
           +T+I  S S +  +  V   ++ L + +   +R+AA +LRLLAK   DNRV I E+GA+P
Sbjct: 331 TTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIP 390

Query: 219 ALIPLLRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAAC 278
            L+ LL S DP TQEH+VTALLNLS++E NK  I +AGAI  +V  LK G+  +++NAA 
Sbjct: 391 LLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSMEARENAAA 450

Query: 279 ALMSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAG 338
            L SL++++ENK +IG  GAI  L+SLL  G+ RGKKDA T ++ LC  + NK RAV  G
Sbjct: 451 TLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGG 510

Query: 339 AVKPLVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEF 398
            V PL  L+ + G G+ ++A+ +L+ L+  QEGK AI E   I  LVE I  GS + +E 
Sbjct: 511 IVDPLTRLLKDAGGGMVDEALAILAILSTNQEGKTAIAEAESIPVLVEIIRTGSPRNREN 570

Query: 399 AVLTLLQLCVESVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSS 458
           A   L  LC+ ++    +    G    L  L++ G+ RAK KA +LL  +++    A ++
Sbjct: 571 AAAILWYLCIGNIERLNVAREVGADVALKELTENGTDRAKRKAASLLELIQQTEGVAVTT 630

Query: 459 SP 461
            P
Sbjct: 631 VP 632

[Close]

BLAST of Lsi01G004830 vs. Swiss-Prot
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.3e-52
Identity = 122/274 (44.53%), Postives = 174/274 (63.50%), Query Frame = 1


Query: 182 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 241
           L+S +   +R+AA ++RLLAK   +NR+ I E+GA+P L+ LL S+DP TQEHAVTALLN
Sbjct: 332 LRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLN 391

Query: 242 LSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIPP 301
           LS+HE+NK  I ++ AI  +V  LKTG+  +++NAA  L SL++++ENK +IG  GAIPP
Sbjct: 392 LSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPP 451

Query: 302 LVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMVV 361
           L++LL +GS RGKKDA T ++ LC  + NK RAV AG V  L+  + +   G+ ++A+ +
Sbjct: 452 LINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSL 511

Query: 362 LSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVREG 421
           LS LAG  EGK  I     I  LVE I+ GS + +E A   L  LC             G
Sbjct: 512 LSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAG 571

Query: 422 GIPPLVALSQTGSVRAKHKAETLLGYLREPRQEA 456
               L  LS+TG+ RAK KA ++L  + +  +++
Sbjct: 572 VEDALKELSETGTDRAKRKASSILELMHQANEDS 605

[Close]

BLAST of Lsi01G004830 vs. TrEMBL
Match: A0A0A0KL34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511670 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 8.9e-242
Identity = 449/460 (97.61%), Postives = 455/460 (98.91%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPL+RNCYSP STTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDISG 120
           AKSGC+SENLTDSVIDLRLGELASRSPKW +KQSSEQEQDFLELSHAFSDFSACSSDISG
Sbjct: 61  AKSGCVSENLTDSVIDLRLGELASRSPKW-SKQSSEQEQDFLELSHAFSDFSACSSDISG 120

Query: 121 ELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID 180
           ELQRLASLPSMAVVP+REGED DPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID
Sbjct: 121 ELQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID 180

Query: 181 GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL 240
           GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL
Sbjct: 181 GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL 240

Query: 241 NLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP 300
           NLSLHESNKVIITNAGA+KSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP
Sbjct: 241 NLSLHESNKVIITNAGAVKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP 300

Query: 301 PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV 360
           PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV
Sbjct: 301 PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV 360

Query: 361 VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVRE 420
           VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGS+KGKEFAVLTLLQLCVESVRNRGLLV E
Sbjct: 361 VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSLKGKEFAVLTLLQLCVESVRNRGLLVSE 420

Query: 421 GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ ASSSSP
Sbjct: 421 GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQVASSSSP 459

[Close]

BLAST of Lsi01G004830 vs. TrEMBL
Match: A0A067KD10_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13689 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 4.6e-198
Identity = 383/471 (81.32%), Postives = 421/471 (89.38%), Query Frame = 1


Query: 1   MVSLEDS---HSTSNRFPLSRN--CYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNS--C 60
           MVSLEDS   H +SNRFPL+RN   Y+P S +++KISR++GRSMRTIRSNF+Q+D+S  C
Sbjct: 1   MVSLEDSPHPHCSSNRFPLARNNNFYNPSSASTTKISRHVGRSMRTIRSNFYQNDSSSCC 60

Query: 61  TFNGSVAAKSGCLSENLTDSVIDLRLGELASR---SPKWPNKQSSEQEQDFLELSHAFSD 120
           +F  +    S  +SENLT+SVID+RLGELA+R   S     K S   ++DFL++S AFSD
Sbjct: 61  SFT-TATDNSAYVSENLTESVIDMRLGELATRNNNSNDKSGKSSFNNDEDFLDISQAFSD 120

Query: 121 FSACSSDISGELQRLASLPSMAVVPKREG-EDADPEPEPCLGFLQRENFSTEIIESISPE 180
           FSACSSDISGELQRLASLPS    PK EG E ++PEPEPCLGFLQRE+FSTEIIESISPE
Sbjct: 121 FSACSSDISGELQRLASLPSPENGPKSEGCETSEPEPEPCLGFLQRESFSTEIIESISPE 180

Query: 181 DLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDP 240
           DLQPTVKIC+DGLQS SIAVKRSAAAKLRLLAKNRSDNR LIGESGA+PALIPLLR +DP
Sbjct: 181 DLQPTVKICVDGLQSPSIAVKRSAAAKLRLLAKNRSDNRALIGESGAIPALIPLLRCSDP 240

Query: 241 WTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEEN 300
           WTQEHAVTALLNLSLHE NK +ITN GAIKSLVY LKTGTETSKQNAACAL+SLALLEEN
Sbjct: 241 WTQEHAVTALLNLSLHEENKSLITNNGAIKSLVYVLKTGTETSKQNAACALLSLALLEEN 300

Query: 301 KTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAE 360
           KTSIGVCGAIPPLVSLL++GSNRGKKDALTTLYKLCSIKPNKERAV+AGAVKPLV +VAE
Sbjct: 301 KTSIGVCGAIPPLVSLLISGSNRGKKDALTTLYKLCSIKPNKERAVSAGAVKPLVVMVAE 360

Query: 361 QGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVE 420
           QG G+AEKAMVVLSSLA I+EG++AIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC +
Sbjct: 361 QGMGMAEKAMVVLSSLAAIEEGREAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCTD 420

Query: 421 SVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           SVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP
Sbjct: 421 SVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 470

[Close]

BLAST of Lsi01G004830 vs. TrEMBL
Match: W9R7F2_9ROSA (U-box domain-containing protein 4 OS=Morus notabilis GN=L484_004268 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 1.0e-197
Identity = 382/462 (82.68%), Postives = 413/462 (89.39%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHS S RFPL+RN Y+  + + S+ISR+ GRSMRTIRSNFFQDD+SC    S  
Sbjct: 1   MVSLEDSHSGSTRFPLTRNYYTA-ANSPSRISRHTGRSMRTIRSNFFQDDHSC----STT 60

Query: 61  AKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDISG 120
             SG +SENLT+SV+D+RLGELASR+ K     S+E+E  FLELS AFSDFSACSSDISG
Sbjct: 61  QASGFVSENLTESVMDMRLGELASRTIKAVKSTSTEEE--FLELSQAFSDFSACSSDISG 120

Query: 121 ELQRLASLPSMAVVPKRE--GEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKIC 180
           ELQRLA LPS    PK E   ED+ PEPEPCLGFLQRE+FSTEIIESISPEDLQPTVKIC
Sbjct: 121 ELQRLACLPSPENAPKSEETAEDSFPEPEPCLGFLQRESFSTEIIESISPEDLQPTVKIC 180

Query: 181 IDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTA 240
           +DGL SSSIAVKRSAAAKLRLLAKNRSDNR LIGESGAVPALIPLLR +DPWTQEHAVTA
Sbjct: 181 VDGLHSSSIAVKRSAAAKLRLLAKNRSDNRALIGESGAVPALIPLLRCSDPWTQEHAVTA 240

Query: 241 LLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGA 300
           LLNLSLHE NK +IT++GAIKSLVY LKTGTETSKQNAACAL+SLAL+EENK+SIG CGA
Sbjct: 241 LLNLSLHEGNKSLITHSGAIKSLVYVLKTGTETSKQNAACALLSLALIEENKSSIGACGA 300

Query: 301 IPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKA 360
           IPPLVSLLLNGS RGKKDALTTLYKLCS+K NKERAV+AGAVKPLV LVAEQGTGLAEKA
Sbjct: 301 IPPLVSLLLNGSTRGKKDALTTLYKLCSVKQNKERAVSAGAVKPLVELVAEQGTGLAEKA 360

Query: 361 MVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLV 420
           MVVLSSLAGI EG++AIVEEGGIAALVEAIEDGSVKG+EFAVLTLLQLC +SVRNRGLLV
Sbjct: 361 MVVLSSLAGIPEGREAIVEEGGIAALVEAIEDGSVKGEEFAVLTLLQLCADSVRNRGLLV 420

Query: 421 REGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           REGGIPPLVALSQTGS+RAKHKAETLL YLREPRQEASSSSP
Sbjct: 421 REGGIPPLVALSQTGSMRAKHKAETLLAYLREPRQEASSSSP 455

[Close]

BLAST of Lsi01G004830 vs. TrEMBL
Match: B9SQF9_RICCO (Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1274640 PE=4 SV=1)

HSP 1 Score: 697.2 bits (1798), Expect = 1.3e-197
Identity = 373/467 (79.87%), Postives = 415/467 (88.87%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSR---NCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNS---CT 60
           MVSLEDSHS +NRFPL+R   N Y+P S ++++I+R++GRSMRTIRSNF+Q+DNS   C+
Sbjct: 1   MVSLEDSHSNANRFPLTRTNNNFYNPSSVSNTRINRHVGRSMRTIRSNFYQNDNSGSCCS 60

Query: 61  FNGSVAAKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSAC 120
           F  +    S  +SENLTDSVID+RLGELASR+ K      S  ++DFL++S AFSDFSAC
Sbjct: 61  FTTAADNDSTYVSENLTDSVIDMRLGELASRNSKTEKSAKSSSDEDFLDISQAFSDFSAC 120

Query: 121 SSDISGELQRLASLPSMAVVPKREG-EDADPEPEPCLGFLQRENFSTEIIESISPEDLQP 180
           SSDISGELQRLA LPS    PK E  E A+PEPEPCLGFLQRENFSTEI+ESISPEDLQP
Sbjct: 121 SSDISGELQRLACLPSPENAPKAENSESAEPEPEPCLGFLQRENFSTEIMESISPEDLQP 180

Query: 181 TVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQE 240
            VKIC+D LQS S+AVKRSAAAKLRLLAKNRSDNR LIGESGA+PALIPLLR +DPWTQE
Sbjct: 181 AVKICVDSLQSPSVAVKRSAAAKLRLLAKNRSDNRALIGESGAIPALIPLLRCSDPWTQE 240

Query: 241 HAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSI 300
           HAVTALLNLSLHE NK +ITN GAIKSLVY LKTGT TSKQNAACAL+SLAL+EENK+SI
Sbjct: 241 HAVTALLNLSLHEENKGLITNNGAIKSLVYVLKTGTGTSKQNAACALLSLALVEENKSSI 300

Query: 301 GVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTG 360
           G CGAIPPLVSLL++GS+RGKKDALTTLYKLCSIK NKERAV+AGAVKPLV +VAEQGTG
Sbjct: 301 GACGAIPPLVSLLISGSSRGKKDALTTLYKLCSIKQNKERAVSAGAVKPLVGMVAEQGTG 360

Query: 361 LAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRN 420
           +AEKAMVVLSSLA I+EG++AIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC +SVRN
Sbjct: 361 MAEKAMVVLSSLAAIEEGREAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCADSVRN 420

Query: 421 RGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           RGLLVREGGIPPLVALSQTG+VRAKHKAETLLGYLREPRQEASSSSP
Sbjct: 421 RGLLVREGGIPPLVALSQTGTVRAKHKAETLLGYLREPRQEASSSSP 467

[Close]

BLAST of Lsi01G004830 vs. TrEMBL
Match: A0A0B0NMP4_GOSAR (U-box domain-containing 4-like protein OS=Gossypium arboreum GN=F383_20481 PE=4 SV=1)

HSP 1 Score: 692.6 bits (1786), Expect = 3.3e-196
Identity = 371/466 (79.61%), Postives = 412/466 (88.41%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNS-CTFNGSV 60
           MVSLEDSHS+SNRFPL RN Y+P S +++KI R++GRSMRTIRSN +Q+DNS C+F  S+
Sbjct: 1   MVSLEDSHSSSNRFPLGRNFYTPGSASTTKIHRHVGRSMRTIRSNLYQNDNSSCSFTSSI 60

Query: 61  AAKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDIS 120
             +S  +SENLT+SVID+RLGELA++S        SE E  FLE+S AFSDFSACSSDIS
Sbjct: 61  PERSAFVSENLTESVIDMRLGELAAKSNAKSVTSESENEA-FLEISQAFSDFSACSSDIS 120

Query: 121 GELQRLASLPSMAVVPKREGEDA-----DPEPEPCLGFLQRENFSTEIIESISPEDLQPT 180
           GELQRLASLPS       E  +      +PEPEPC GFLQRENFSTEIIESISPEDLQPT
Sbjct: 121 GELQRLASLPSPENALMNESSNGVQSEPEPEPEPCHGFLQRENFSTEIIESISPEDLQPT 180

Query: 181 VKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEH 240
           VKICIDGL+S S+AVKRSAAAKLRLLAKNR DNR LIGESGA+PALIPLLR++DPWTQEH
Sbjct: 181 VKICIDGLESPSVAVKRSAAAKLRLLAKNRVDNRALIGESGAIPALIPLLRNSDPWTQEH 240

Query: 241 AVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIG 300
           AVTALLNLSL+E NK +I NAGAIKSLVY LKTGTETSKQNAACAL+SLAL+EENKTSIG
Sbjct: 241 AVTALLNLSLYEGNKTLIINAGAIKSLVYVLKTGTETSKQNAACALLSLALIEENKTSIG 300

Query: 301 VCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGL 360
            CGAIPPLVSLL+NGSNRGKKDALTTLYKLCS + NKERAVTAGAV+PLV +V EQGTG+
Sbjct: 301 ACGAIPPLVSLLMNGSNRGKKDALTTLYKLCSARQNKERAVTAGAVRPLVGMVGEQGTGM 360

Query: 361 AEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNR 420
           +EKAMVVLSSLAGI+EGK+AIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC +++RNR
Sbjct: 361 SEKAMVVLSSLAGIKEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCADNIRNR 420

Query: 421 GLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           GLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ+ASSSSP
Sbjct: 421 GLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQDASSSSP 465

[Close]

BLAST of Lsi01G004830 vs. TAIR10
Match: AT4G16490.1 (AT4G16490.1 ARM repeat superfamily protein)

HSP 1 Score: 633.6 bits (1633), Expect = 9.2e-182
Identity = 354/472 (75.00%), Postives = 396/472 (83.90%), Query Frame = 1


Query: 1   MVSLED--SHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQD-DNSCTFNG 60
           MVS+E+  SHS S RFPL+ + Y   S +++++ R  GRSMRT+RSNF+Q  D SC+F G
Sbjct: 1   MVSVEEPLSHSNSTRFPLTTDFYGSSSPSAARLHRQAGRSMRTVRSNFYQSGDQSCSFVG 60

Query: 61  SVAAKSGCLSENLTDSVIDLRLGELASRSPKWPNKQ-SSEQEQDFLELSHAFSDFSACSS 120
           S+  KS   SE L+DSVID+RLGELA ++    N   SS +E+ FL++S AFSDFSACSS
Sbjct: 61  SIGDKSEYASEFLSDSVIDMRLGELALKNSNSLNSNASSMKEEAFLDISQAFSDFSACSS 120

Query: 121 DISGELQRLASLPSMAVVPKREGEDA----DPE--PEPCLGFLQRENFSTEIIESISPED 180
           DISGELQRLA LPS        G D     DPE   EPCLGFLQRENFSTEIIE ISPED
Sbjct: 121 DISGELQRLACLPSPEADRNESGGDNEAEHDPELEREPCLGFLQRENFSTEIIECISPED 180

Query: 181 LQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPW 240
           LQPTVK+CIDGL+SSS+A+KRSAAAKLRLLAKNR+DNRVLIGESGA+ ALIPLLR  DPW
Sbjct: 181 LQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPW 240

Query: 241 TQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENK 300
           TQEHAVTALLNLSLH+ NK +I   GAIKSLV+ LKTGTETSKQNAACAL+SLALLEENK
Sbjct: 241 TQEHAVTALLNLSLHDQNKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENK 300

Query: 301 TSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQ 360
            SIG CGAIPPLVSLLLNGS RGKKDALTTLYKLC+++ NKERAVTAGAVKPLV LVAE+
Sbjct: 301 GSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEE 360

Query: 361 GTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVES 420
           GTG+AEKAMVVLSSLA I +GK+AIVEEGGIAALVEAIEDGSVKGKEFA+LTLLQLC +S
Sbjct: 361 GTGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSVKGKEFAILTLLQLCSDS 420

Query: 421 VRNRGLLVREGGIPPLVALSQTG--SVRAKHKAETLLGYLREPRQEASSSSP 461
           VRNRGLLVREG IPPLV LSQ+G  SVRAK KAE LLGYLREPR+EASSSSP
Sbjct: 421 VRNRGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYLREPRKEASSSSP 472

[Close]

BLAST of Lsi01G004830 vs. TAIR10
Match: AT3G01400.1 (AT3G01400.1 ARM repeat superfamily protein)

HSP 1 Score: 265.0 bits (676), Expect = 8.6e-71
Identity = 165/352 (46.88%), Postives = 218/352 (61.93%), Query Frame = 1


Query: 102 LELSHAFSDFSACSSDISGELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTE 161
           L L+   S FS C+SD SGE    +S                               S  
Sbjct: 21  LSLNDDSSAFSDCNSDRSGEFPTASSE------------------------------SRR 80

Query: 162 IIESISPEDLQPTVKICIDGLQSS-SIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPAL 221
           ++ S + E+    +   +  L SS SI  ++ AA ++RLL+KN+ +NR+ I ++GA+  L
Sbjct: 81  LLLSCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPL 140

Query: 222 IPLLRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACAL 281
           I L+ S+D   QE+ VTA+LNLSL + NK  I ++GAIK LV ALK GT T+K+NAACAL
Sbjct: 141 ISLISSSDLQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACAL 200

Query: 282 MSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAV 341
           + L+ +EENK +IG  GAIP LV+LL  G  R KKDA T LY LCS K NK RAV +G +
Sbjct: 201 LRLSQIEENKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIM 260

Query: 342 KPLVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAV 401
           KPLV L+A+ G+ + +K+  V+S L  + E K AIVEEGG+  LVE +E G+ + KE AV
Sbjct: 261 KPLVELMADFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQKEMAV 320

Query: 402 LTLLQLCVESVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPR 453
             LLQLC ESV  R ++ REG IPPLVALSQ G+ RAK KAE L+  LR+PR
Sbjct: 321 SILLQLCEESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPR 342

[Close]

BLAST of Lsi01G004830 vs. TAIR10
Match: AT2G23140.1 (AT2G23140.1 RING/U-box superfamily protein with ARM repeat domain)

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-68
Identity = 165/387 (42.64%), Postives = 239/387 (61.76%), Query Frame = 1


Query: 85  RSPKWPNKQSSEQ--EQDFLELSHAFSDFSACSSDISGELQRLASLPSMAVVPKREGEDA 144
           RSP   +  S+E+    D  E S   +  +  SSD SGE++      + +   +R+  D 
Sbjct: 443 RSPSATSTVSNEEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDF 502

Query: 145 DPEPEPCLGFLQR-----------ENFSTEIIESISPE------DLQPTVKICIDGLQSS 204
            P+      F+ R           E   + I+ + S E      +++  VK  ++ L+SS
Sbjct: 503 SPK------FMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSS 562

Query: 205 SIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNLSLH 264
           S+  +R A A+LRLLAK+  DNR++IG SGA+  L+ LL STD  TQE+AVTALLNLS++
Sbjct: 563 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLNLSIN 622

Query: 265 ESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIPPLVSL 324
           ++NK  I +AGAI+ L++ L+ G+  +K+N+A  L SL+++EENK  IG  GAI PLV L
Sbjct: 623 DNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDL 682

Query: 325 LLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMVVLSSL 384
           L NG+ RGKKDA T L+ L   + NK   V +GAV+ L+ L+ +   G+ +KA+ VL++L
Sbjct: 683 LGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANL 742

Query: 385 AGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVREGGIPP 444
           A I EG++AI +EGGI  LVE +E GS +GKE A   LLQL   S R   ++++EG +PP
Sbjct: 743 ATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPP 802

Query: 445 LVALSQTGSVRAKHKAETLLGYLREPR 453
           LVALSQ+G+ RA+ KA+ LL Y R  R
Sbjct: 803 LVALSQSGTPRAREKAQALLSYFRNQR 822

[Close]

BLAST of Lsi01G004830 vs. TAIR10
Match: AT5G58680.1 (AT5G58680.1 ARM repeat superfamily protein)

HSP 1 Score: 249.6 bits (636), Expect = 3.7e-66
Identity = 157/365 (43.01%), Postives = 222/365 (60.82%), Query Frame = 1


Query: 101 FLELSHAFSD---------FSACSSDISGELQRLASLPSMAVVPKREGEDADPEPEPCLG 160
           F  + H+FSD         FS C+SDIS E     S                        
Sbjct: 7   FTYMDHSFSDISLNFDSSAFSDCNSDISCEFPTTTS------------------------ 66

Query: 161 FLQRENFSTEIIESISPEDLQPTVKICIDGLQSSS-IAVKRSAAAKLRLLAKNRSDNRVL 220
               E+   ++  S + ++    ++  I  L+SSS I  ++ AA ++RLL+KN+ +NR+ 
Sbjct: 67  ----ESRQRKLFLSCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIK 126

Query: 221 IGESGAVPALIPLLRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTE 280
           + ++GA+  L+ L+ S+D   QE+ VTA+LNLSL + NK +I ++GA+K LV AL+ GT 
Sbjct: 127 LAKAGAIKPLVSLISSSDLQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTP 186

Query: 281 TSKQNAACALMSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPN 340
           T+K+NAACAL+ L+ +EENK +IG  GAIP LV+LL NG  R KKDA T LY LCS   N
Sbjct: 187 TTKENAACALLRLSQVEENKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNEN 246

Query: 341 KERAVTAGAVKPLVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIED 400
           K RAV +G +KPLV L+ +  + + +K+  V++ L    E K A+VEEGG+  LVE +E 
Sbjct: 247 KTRAVESGIMKPLVELMIDFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEA 306

Query: 401 GSVKGKEFAVLTLLQLCVESVRNRGLLVREGGIPPLVALSQTGSVR-AKHKAETLLGYLR 455
           G+ + KE +V  LLQLC ESV  R ++ REG +PPLVALSQ  + R AK KAE L+  LR
Sbjct: 307 GTQRQKEISVSILLQLCEESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLR 343

[Close]

BLAST of Lsi01G004830 vs. TAIR10
Match: AT5G67340.1 (AT5G67340.1 ARM repeat superfamily protein)

HSP 1 Score: 245.0 bits (624), Expect = 9.2e-65
Identity = 144/291 (49.48%), Postives = 197/291 (67.70%), Query Frame = 1


Query: 164 ESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPL 223
           E+ S   ++  VK  ID L+SSS+  +R A A++R+LA+N +DNR++I    A+P+L+ L
Sbjct: 412 ETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSL 471

Query: 224 LRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTG-TETSKQNAACALMS 283
           L STD   Q  AVT LLNLS++++NK +I  +GAI  L++ LKTG  E +K N+A  L S
Sbjct: 472 LYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFS 531

Query: 284 LALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKP 343
           L+++EE KT IG  GAI PLV LL +GS  GKKDA T L+ L     NK + + AGAV+ 
Sbjct: 532 LSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRY 591

Query: 344 LVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLT 403
           LV L+ +   G+ EKA+VVL++LA ++EGK AI EEGGI  LVE +E GS +GKE A   
Sbjct: 592 LVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAA 651

Query: 404 LLQLCVESVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ 454
           LLQLC  S +    ++REG IPPLVAL+++G+ R K KA+ LL Y +  RQ
Sbjct: 652 LLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQ 701

[Close]

BLAST of Lsi01G004830 vs. NCBI nr
Match: gi|449434030|ref|XP_004134799.1| (PREDICTED: U-box domain-containing protein 4 [Cucumis sativus])

HSP 1 Score: 844.0 bits (2179), Expect = 1.3e-241
Identity = 449/460 (97.61%), Postives = 455/460 (98.91%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPL+RNCYSP STTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDISG 120
           AKSGC+SENLTDSVIDLRLGELASRSPKW +KQSSEQEQDFLELSHAFSDFSACSSDISG
Sbjct: 61  AKSGCVSENLTDSVIDLRLGELASRSPKW-SKQSSEQEQDFLELSHAFSDFSACSSDISG 120

Query: 121 ELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID 180
           ELQRLASLPSMAVVP+REGED DPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID
Sbjct: 121 ELQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID 180

Query: 181 GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL 240
           GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL
Sbjct: 181 GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL 240

Query: 241 NLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP 300
           NLSLHESNKVIITNAGA+KSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP
Sbjct: 241 NLSLHESNKVIITNAGAVKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP 300

Query: 301 PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV 360
           PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV
Sbjct: 301 PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV 360

Query: 361 VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVRE 420
           VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGS+KGKEFAVLTLLQLCVESVRNRGLLV E
Sbjct: 361 VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSLKGKEFAVLTLLQLCVESVRNRGLLVSE 420

Query: 421 GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ ASSSSP
Sbjct: 421 GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQVASSSSP 459

[Close]

BLAST of Lsi01G004830 vs. NCBI nr
Match: gi|659079101|ref|XP_008440076.1| (PREDICTED: U-box domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 841.6 bits (2173), Expect = 6.3e-241
Identity = 449/460 (97.61%), Postives = 454/460 (98.70%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPL+RNCYSP STTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDISG 120
           AKS C+SENLTDSVIDLRLGELASRSPKW +KQSSEQEQDFLELSHAFSDFSACSSDISG
Sbjct: 61  AKSVCVSENLTDSVIDLRLGELASRSPKW-SKQSSEQEQDFLELSHAFSDFSACSSDISG 120

Query: 121 ELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID 180
           ELQRLASLPSMAVVP+REGED DPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID
Sbjct: 121 ELQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICID 180

Query: 181 GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL 240
           GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL
Sbjct: 181 GLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALL 240

Query: 241 NLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP 300
           NLSLHESNKVIITNAGA+KSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP
Sbjct: 241 NLSLHESNKVIITNAGAVKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIP 300

Query: 301 PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV 360
           PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV
Sbjct: 301 PLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMV 360

Query: 361 VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVRE 420
           VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLV E
Sbjct: 361 VLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVSE 420

Query: 421 GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQ ASSSSP
Sbjct: 421 GGIPPLVALSQTGSVRAKHKAETLLGYLREPRQVASSSSP 459

[Close]

BLAST of Lsi01G004830 vs. NCBI nr
Match: gi|1009167648|ref|XP_015902234.1| (PREDICTED: U-box domain-containing protein 4-like [Ziziphus jujuba])

HSP 1 Score: 714.9 bits (1844), Expect = 8.9e-203
Identity = 384/461 (83.30%), Postives = 413/461 (89.59%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDN-SCTFNGSV 60
           MVSLEDSH+ SNRFPL RN Y+  S +SSKI R+ GRSMRTIRS+ FQDDN SC+F GS 
Sbjct: 1   MVSLEDSHTGSNRFPLGRNYYTTSSVSSSKIHRHSGRSMRTIRSSIFQDDNNSCSFAGSA 60

Query: 61  AAKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDIS 120
              SGC+SENLTDSV+D+RLGELA+R+ K     SS    DFL+LS AFSDFSACSSDIS
Sbjct: 61  PRVSGCVSENLTDSVVDMRLGELATRANK--AAVSSSPTDDFLDLSQAFSDFSACSSDIS 120

Query: 121 GELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICI 180
           GELQRLA LPS    PK E ++  PEPEPC+GFLQR+ FSTEIIESISPEDLQPTVKIC+
Sbjct: 121 GELQRLACLPSAENAPKNESDENTPEPEPCMGFLQRDTFSTEIIESISPEDLQPTVKICV 180

Query: 181 DGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTAL 240
           D LQS S+AVKRSAAAKLRLLAKNR+DNRVLIGESGAVP+LIPLLR +DPWTQEHAVTAL
Sbjct: 181 DSLQSPSVAVKRSAAAKLRLLAKNRADNRVLIGESGAVPSLIPLLRCSDPWTQEHAVTAL 240

Query: 241 LNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAI 300
           LNLSLHE NKV+ITNAGAIKSLVY LKTGTETSKQNAACAL+SLAL+EENK+SIG CGAI
Sbjct: 241 LNLSLHEVNKVLITNAGAIKSLVYVLKTGTETSKQNAACALLSLALVEENKSSIGACGAI 300

Query: 301 PPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAM 360
           PPLVSLLLNGS RGKKDALTTLYKLCSI PNKERAV+AGAVKPLV LVAEQGTGLAEKAM
Sbjct: 301 PPLVSLLLNGSTRGKKDALTTLYKLCSINPNKERAVSAGAVKPLVTLVAEQGTGLAEKAM 360

Query: 361 VVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVR 420
           V+LSSLA I+EGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC +SVRNRGLLVR
Sbjct: 361 VILSSLAAIEEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCADSVRNRGLLVR 420

Query: 421 EGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           EGGIPPLVALSQTGSVRAKHKAETLLGYLRE RQEASSSSP
Sbjct: 421 EGGIPPLVALSQTGSVRAKHKAETLLGYLRESRQEASSSSP 459

[Close]

BLAST of Lsi01G004830 vs. NCBI nr
Match: gi|1009166915|ref|XP_015901842.1| (PREDICTED: U-box domain-containing protein 4-like [Ziziphus jujuba])

HSP 1 Score: 713.8 bits (1841), Expect = 2.0e-202
Identity = 383/461 (83.08%), Postives = 413/461 (89.59%), Query Frame = 1


Query: 1   MVSLEDSHSTSNRFPLSRNCYSPLSTTSSKISRNIGRSMRTIRSNFFQDDN-SCTFNGSV 60
           MVSLEDSH+ SNRFPL RN Y+  S +SSKI R+ GRSMRTIRS+ FQDDN SC+F GS 
Sbjct: 1   MVSLEDSHTGSNRFPLGRNYYTTSSVSSSKIHRHSGRSMRTIRSSIFQDDNNSCSFAGSA 60

Query: 61  AAKSGCLSENLTDSVIDLRLGELASRSPKWPNKQSSEQEQDFLELSHAFSDFSACSSDIS 120
              SGC+SENLTDSV+D+RLGELA+R+ K     SS    DFL+LS AFSDFSACSSDIS
Sbjct: 61  PRVSGCVSENLTDSVVDMRLGELATRANK--AAVSSSPTDDFLDLSQAFSDFSACSSDIS 120

Query: 121 GELQRLASLPSMAVVPKREGEDADPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICI 180
           GELQRLA LPS    PK E ++  PEPEPC+GFLQR+ FSTEIIESISPEDLQPTVKIC+
Sbjct: 121 GELQRLACLPSAENAPKNESDENTPEPEPCMGFLQRDTFSTEIIESISPEDLQPTVKICV 180

Query: 181 DGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTAL 240
           D LQS S+AVKRSAAAKLRLLAKNR+DNRVLIGESGAVP+LIPLLR +DPWTQEHAVTAL
Sbjct: 181 DSLQSPSVAVKRSAAAKLRLLAKNRADNRVLIGESGAVPSLIPLLRCSDPWTQEHAVTAL 240

Query: 241 LNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAI 300
           LNLSLHE NKV+ITNAGAIKSLVY LKTGTETSKQNAACAL+SLAL+EENK+SIG CGAI
Sbjct: 241 LNLSLHEVNKVLITNAGAIKSLVYVLKTGTETSKQNAACALLSLALVEENKSSIGACGAI 300

Query: 301 PPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAM 360
           PPLVSLLLNGS RGKKDALTTLYKLCSI PNKERAV+AGAVKPLV LVAEQGTGLAEKAM
Sbjct: 301 PPLVSLLLNGSTRGKKDALTTLYKLCSINPNKERAVSAGAVKPLVTLVAEQGTGLAEKAM 360

Query: 361 VVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVESVRNRGLLVR 420
           V+LSSLA I+EGKDAIVEEGGIAALVEAIEDGSV+GKEFAVLTLLQLC +SVRNRGLLVR
Sbjct: 361 VILSSLAAIEEGKDAIVEEGGIAALVEAIEDGSVRGKEFAVLTLLQLCADSVRNRGLLVR 420

Query: 421 EGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           EGGIPPLVALSQTGSVRAKHKAETLLGYLRE RQEASSSSP
Sbjct: 421 EGGIPPLVALSQTGSVRAKHKAETLLGYLRESRQEASSSSP 459

[Close]

BLAST of Lsi01G004830 vs. NCBI nr
Match: gi|802634586|ref|XP_012078076.1| (PREDICTED: U-box domain-containing protein 4 [Jatropha curcas])

HSP 1 Score: 698.7 bits (1802), Expect = 6.6e-198
Identity = 383/471 (81.32%), Postives = 421/471 (89.38%), Query Frame = 1


Query: 1   MVSLEDS---HSTSNRFPLSRN--CYSPLSTTSSKISRNIGRSMRTIRSNFFQDDNS--C 60
           MVSLEDS   H +SNRFPL+RN   Y+P S +++KISR++GRSMRTIRSNF+Q+D+S  C
Sbjct: 1   MVSLEDSPHPHCSSNRFPLARNNNFYNPSSASTTKISRHVGRSMRTIRSNFYQNDSSSCC 60

Query: 61  TFNGSVAAKSGCLSENLTDSVIDLRLGELASR---SPKWPNKQSSEQEQDFLELSHAFSD 120
           +F  +    S  +SENLT+SVID+RLGELA+R   S     K S   ++DFL++S AFSD
Sbjct: 61  SFT-TATDNSAYVSENLTESVIDMRLGELATRNNNSNDKSGKSSFNNDEDFLDISQAFSD 120

Query: 121 FSACSSDISGELQRLASLPSMAVVPKREG-EDADPEPEPCLGFLQRENFSTEIIESISPE 180
           FSACSSDISGELQRLASLPS    PK EG E ++PEPEPCLGFLQRE+FSTEIIESISPE
Sbjct: 121 FSACSSDISGELQRLASLPSPENGPKSEGCETSEPEPEPCLGFLQRESFSTEIIESISPE 180

Query: 181 DLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDP 240
           DLQPTVKIC+DGLQS SIAVKRSAAAKLRLLAKNRSDNR LIGESGA+PALIPLLR +DP
Sbjct: 181 DLQPTVKICVDGLQSPSIAVKRSAAAKLRLLAKNRSDNRALIGESGAIPALIPLLRCSDP 240

Query: 241 WTQEHAVTALLNLSLHESNKVIITNAGAIKSLVYALKTGTETSKQNAACALMSLALLEEN 300
           WTQEHAVTALLNLSLHE NK +ITN GAIKSLVY LKTGTETSKQNAACAL+SLALLEEN
Sbjct: 241 WTQEHAVTALLNLSLHEENKSLITNNGAIKSLVYVLKTGTETSKQNAACALLSLALLEEN 300

Query: 301 KTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAE 360
           KTSIGVCGAIPPLVSLL++GSNRGKKDALTTLYKLCSIKPNKERAV+AGAVKPLV +VAE
Sbjct: 301 KTSIGVCGAIPPLVSLLISGSNRGKKDALTTLYKLCSIKPNKERAVSAGAVKPLVVMVAE 360

Query: 361 QGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCVE 420
           QG G+AEKAMVVLSSLA I+EG++AIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLC +
Sbjct: 361 QGMGMAEKAMVVLSSLAAIEEGREAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCTD 420

Query: 421 SVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 461
           SVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP
Sbjct: 421 SVRNRGLLVREGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQEASSSSP 470

The following BLAST results are available for this feature:

BLAST of Lsi01G004830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUB4_ARATH	1.9e-67	42.64	U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3	[more]
PUB2_ARATH	1.6e-63	49.48	U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1	[more]
PUB3_ARATH	7.4e-56	48.21	U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3 PE=2 SV=2	[more]
PUB14_ARATH	4.8e-55	42.72	U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14 PE=1 SV=1	[more]
PUB12_ORYSJ	1.3e-52	44.53	U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2...	[more]

BLAST of Lsi01G004830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL34_CUCSA	8.9e-242	97.61	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511670 PE=4 SV=1	[more]
A0A067KD10_JATCU	4.6e-198	81.32	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13689 PE=4 SV=1	[more]
W9R7F2_9ROSA	1.0e-197	82.68	U-box domain-containing protein 4 OS=Morus notabilis GN=L484_004268 PE=4 SV=1	[more]
B9SQF9_RICCO	1.3e-197	79.87	Ubiquitin-protein ligase, putative OS=Ricinus communis GN=RCOM_1274640 PE=4 SV=1	[more]
A0A0B0NMP4_GOSAR	3.3e-196	79.61	U-box domain-containing 4-like protein OS=Gossypium arboreum GN=F383_20481 PE=4 ...	[more]

BLAST of Lsi01G004830 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16490.1	9.2e-182	75.00	ARM repeat superfamily protein	[more]
AT3G01400.1	8.6e-71	46.88	ARM repeat superfamily protein	[more]
AT2G23140.1	1.1e-68	42.64	RING/U-box superfamily protein with ARM repeat domain	[more]
AT5G58680.1	3.7e-66	43.01	ARM repeat superfamily protein	[more]
AT5G67340.1	9.2e-65	49.48	ARM repeat superfamily protein	[more]

BLAST of Lsi01G004830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434030\|ref\|XP_004134799.1\|	1.3e-241	97.61	PREDICTED: U-box domain-containing protein 4 [Cucumis sativus]	[more]
gi\|659079101\|ref\|XP_008440076.1\|	6.3e-241	97.61	PREDICTED: U-box domain-containing protein 4 [Cucumis melo]	[more]
gi\|1009167648\|ref\|XP_015902234.1\|	8.9e-203	83.30	PREDICTED: U-box domain-containing protein 4-like [Ziziphus jujuba]	[more]
gi\|1009166915\|ref\|XP_015901842.1\|	2.0e-202	83.08	PREDICTED: U-box domain-containing protein 4-like [Ziziphus jujuba]	[more]
gi\|802634586\|ref\|XP_012078076.1\|	6.6e-198	81.32	PREDICTED: U-box domain-containing protein 4 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR000225	Armadillo

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0007030	Golgi organization
biological_process	GO:0008152	metabolic process
biological_process	GO:0009651	response to salt stress
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005488	binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi01G004830.1	Lsi01G004830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 288..326 score: 7.6E-6coord: 205..243 score: 3.
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 245..285 score: 46.0coord: 286..326 score: 0.83coord: 410..450 score: 19.0coord: 327..367 score: 210.0coord: 204..244 score: 0.0014coord: 368..408 score:
IPR000225	Armadillo	PROFILE	PS50176	ARM_REPEAT	coord: 215..257 score: 12.547coord: 338..380 score: 9
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 175..448 score: 8.3
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 172..448 score: 1.95
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 95..455 score: 3.3E
None	No IPR available	PANTHER	PTHR23315:SF129	ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN	coord: 95..455 score: 3.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi01G004830	Csa6G511670	Cucumber (Chinese Long) v2	culsiB434
Lsi01G004830	CSPI06G32980	Wild cucumber (PI 183967)	cpilsiB439
Lsi01G004830	Cucsa.044730	Cucumber (Gy14) v1	cgylsiB022
Lsi01G004830	CmaCh03G005770	Cucurbita maxima (Rimu)	cmalsiB597
Lsi01G004830	CmaCh07G003500	Cucurbita maxima (Rimu)	cmalsiB786
Lsi01G004830	CmoCh07G003410	Cucurbita moschata (Rifu)	cmolsiB774
Lsi01G004830	CmoCh03G006050	Cucurbita moschata (Rifu)	cmolsiB582
Lsi01G004830	Cla014400	Watermelon (97103) v1	lsiwmB144
Lsi01G004830	MELO3C007441	Melon (DHL92) v3.5.1	lsimeB149
Lsi01G004830	ClCG01G021420	Watermelon (Charleston Gray)	lsiwcgB127
Lsi01G004830	MELO3C007441.2	Melon (DHL92) v3.6.1	lsimedB156
Lsi01G004830	Cla97C01G020990	Watermelon (97103) v2	lsiwmbB115
Lsi01G004830	Bhi03G000501	Wax gourd	lsiwgoB168
Lsi01G004830	Cp4.1LG19g07990	Cucurbita pepo (Zucchini)	cpelsiB396
Lsi01G004830	Cp4.1LG10g09890	Cucurbita pepo (Zucchini)	cpelsiB054
Lsi01G004830	CsGy6G032560	Cucumber (Gy14) v2	cgyblsiB398
Lsi01G004830	Carg00500	Silver-seed gourd	carlsiB364
Lsi01G004830	Carg07879	Silver-seed gourd	carlsiB585
Lsi01G004830	CsaV3_6G048440	Cucumber (Chinese Long) v3	cuclsiB462

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi01G004830	Cucumber (Chinese Long) v3	cuclsiB017
Lsi01G004830	Watermelon (97103) v2	lsiwmbB112
Lsi01G004830	Bottle gourd (USVL1VR-Ls)	lsilsiB064
Lsi01G004830	Cucurbita maxima (Rimu)	cmalsiB367
Lsi01G004830	Cucurbita pepo (Zucchini)	cpelsiB413
Lsi01G004830	Wild cucumber (PI 183967)	cpilsiB019
Lsi01G004830	Cucumber (Chinese Long) v2	culsiB020
Lsi01G004830	Melon (DHL92) v3.5.1	lsimeB129
Lsi01G004830	Cucumber (Gy14) v2	cgyblsiB014
Lsi01G004830	Cucumber (Gy14) v2	cgyblsiB016