CsGy6G032560 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G032560
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	U-box domain-containing protein 4
Location	Chr6 : 29700218 .. 29701695 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCGCTTGAAGATTCTCATTCCACTTCTAATCGCTTTCCTTTGACCAGAAATTGTTATAGTCCATCCTCTACTACTTCCAGTAAAATCAGCAGGAACATTGGCCGTTCTATGCGTACTATTCGTTCTAATTTCTTTCAAGATGATAATAGTTGTACCTTTAATGGCTCTGTCGCTGCTAAATCCGGCTGTGTCTCTGAAAATCTCACCGATTCTGTCATCGACTTGAGACTTGGCGAGTTGGCATCGCGTAGCCCTAAATGGTCTAAGCAATCTTCTGAACAGGAACAGGATTTTCTTGAACTTTCTCATGCTTTCAGTGATTTCTCCGCTTGTAGTAGTGATATTTCTGGAGAATTGCAGAGACTTGCAAGTTTACCTTCTATGGCGGTTGTTCCTCAACGAGAAGGTGAGGATGGTGACCCGGAGCCTGAACCCTGTTTAGGGTTTTTGCAGAGAGAGAATTTCTCCACTGAGATTATTGAGAGTATTTCGCCTGAAGATCTACAGCCGACTGTTAAGATCTGTATCGATGGGCTTCAATCTTCGTCAATTGCGGTCAAGCGATCTGCGGCGGCTAAACTGAGGCTTCTGGCGAAGAATCGGTCTGATAATCGGGTTCTCATTGGGGAGTCTGGGGCTGTTCCTGCTTTAATTCCTTTGCTTCGATCTACCGATCCATGGACACAAGAGCACGCCGTAACTGCCTTGCTGAATCTCTCTCTCCATGAGTCTAATAAAGTTATTATCACGAATGCTGGAGCCGTGAAGTCGCTGGTTTATGCGCTCAAAACCGGTACGGAAACTTCGAAACAGAATGCGGCGTGTGCTTTGATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGCCATTCCACCACTGGTATCTTTACTACTGAATGGATCGAATAGAGGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTCGATCAAACCGAATAAGGAGCGGGCCGTCACTGCTGGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCAGAGCAAGGTACGGGTTTAGCAGAGAAGGCGATGGTGGTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGGTCGTTGAAAGGGAAAGAATTTGCAGTGTTGACACTATTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAGCGAAGGTGGAATTCCCCCATTAGTTGCACTTTCTCAGACTGGAAGCGTTCGAGCAAAGCATAAGGTGATTACCGAAAACTGATTAGTCATCAATTTTTACACGATTTTTTGTTAACTGATTCTATGAAATGAACACTAATGAAAAATTGTTAATTTTTGCAGGCAGAAACGCTTCTGGGGTATCTAAGAGAACCAAGACAAGTTGCATCCTCATCAAGTCCTTAA

mRNA sequence

ATGGTGTCGCTTGAAGATTCTCATTCCACTTCTAATCGCTTTCCTTTGACCAGAAATTGTTATAGTCCATCCTCTACTACTTCCAGTAAAATCAGCAGGAACATTGGCCGTTCTATGCGTACTATTCGTTCTAATTTCTTTCAAGATGATAATAGTTGTACCTTTAATGGCTCTGTCGCTGCTAAATCCGGCTGTGTCTCTGAAAATCTCACCGATTCTGTCATCGACTTGAGACTTGGCGAGTTGGCATCGCGTAGCCCTAAATGGTCTAAGCAATCTTCTGAACAGGAACAGGATTTTCTTGAACTTTCTCATGCTTTCAGTGATTTCTCCGCTTGTAGTAGTGATATTTCTGGAGAATTGCAGAGACTTGCAAGTTTACCTTCTATGGCGGTTGTTCCTCAACGAGAAGGTGAGGATGGTGACCCGGAGCCTGAACCCTGTTTAGGGTTTTTGCAGAGAGAGAATTTCTCCACTGAGATTATTGAGAGTATTTCGCCTGAAGATCTACAGCCGACTGTTAAGATCTGTATCGATGGGCTTCAATCTTCGTCAATTGCGGTCAAGCGATCTGCGGCGGCTAAACTGAGGCTTCTGGCGAAGAATCGGTCTGATAATCGGGTTCTCATTGGGGAGTCTGGGGCTGTTCCTGCTTTAATTCCTTTGCTTCGATCTACCGATCCATGGACACAAGAGCACGCCGTAACTGCCTTGCTGAATCTCTCTCTCCATGAGTCTAATAAAGTTATTATCACGAATGCTGGAGCCGTGAAGTCGCTGGTTTATGCGCTCAAAACCGGTACGGAAACTTCGAAACAGAATGCGGCGTGTGCTTTGATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGCCATTCCACCACTGGTATCTTTACTACTGAATGGATCGAATAGAGGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTCGATCAAACCGAATAAGGAGCGGGCCGTCACTGCTGGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCAGAGCAAGGTACGGGTTTAGCAGAGAAGGCGATGGTGGTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGGTCGTTGAAAGGGAAAGAATTTGCAGTGTTGACACTATTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAGCGAAGGTGGAATTCCCCCATTAGTTGCACTTTCTCAGACTGGAAGCGTTCGAGCAAAGCATAAGGCAGAAACGCTTCTGGGGTATCTAAGAGAACCAAGACAAGTTGCATCCTCATCAAGTCCTTAA

Coding sequence (CDS)

ATGGTGTCGCTTGAAGATTCTCATTCCACTTCTAATCGCTTTCCTTTGACCAGAAATTGTTATAGTCCATCCTCTACTACTTCCAGTAAAATCAGCAGGAACATTGGCCGTTCTATGCGTACTATTCGTTCTAATTTCTTTCAAGATGATAATAGTTGTACCTTTAATGGCTCTGTCGCTGCTAAATCCGGCTGTGTCTCTGAAAATCTCACCGATTCTGTCATCGACTTGAGACTTGGCGAGTTGGCATCGCGTAGCCCTAAATGGTCTAAGCAATCTTCTGAACAGGAACAGGATTTTCTTGAACTTTCTCATGCTTTCAGTGATTTCTCCGCTTGTAGTAGTGATATTTCTGGAGAATTGCAGAGACTTGCAAGTTTACCTTCTATGGCGGTTGTTCCTCAACGAGAAGGTGAGGATGGTGACCCGGAGCCTGAACCCTGTTTAGGGTTTTTGCAGAGAGAGAATTTCTCCACTGAGATTATTGAGAGTATTTCGCCTGAAGATCTACAGCCGACTGTTAAGATCTGTATCGATGGGCTTCAATCTTCGTCAATTGCGGTCAAGCGATCTGCGGCGGCTAAACTGAGGCTTCTGGCGAAGAATCGGTCTGATAATCGGGTTCTCATTGGGGAGTCTGGGGCTGTTCCTGCTTTAATTCCTTTGCTTCGATCTACCGATCCATGGACACAAGAGCACGCCGTAACTGCCTTGCTGAATCTCTCTCTCCATGAGTCTAATAAAGTTATTATCACGAATGCTGGAGCCGTGAAGTCGCTGGTTTATGCGCTCAAAACCGGTACGGAAACTTCGAAACAGAATGCGGCGTGTGCTTTGATGAGCCTTGCTTTGTTGGAGGAAAACAAAACTTCGATTGGGGTTTGCGGGGCCATTCCACCACTGGTATCTTTACTACTGAATGGATCGAATAGAGGGAAGAAGGACGCGCTCACGACGCTCTATAAGCTTTGCTCGATCAAACCGAATAAGGAGCGGGCCGTCACTGCTGGAGCTGTGAAGCCATTGGTGGCGCTAGTAGCAGAGCAAGGTACGGGTTTAGCAGAGAAGGCGATGGTGGTTCTGAGTAGCCTGGCTGGGATTCAAGAGGGAAAGGATGCGATTGTGGAAGAGGGTGGAATTGCTGCGCTTGTAGAAGCAATTGAAGATGGGTCGTTGAAAGGGAAAGAATTTGCAGTGTTGACACTATTGCAATTGTGTGTTGAGAGTGTGAGAAATCGAGGGTTGCTCGTCAGCGAAGGTGGAATTCCCCCATTAGTTGCACTTTCTCAGACTGGAAGCGTTCGAGCAAAGCATAAGGCAGAAACGCTTCTGGGGTATCTAAGAGAACCAAGACAAGTTGCATCCTCATCAAGTCCTTAA

Protein sequence

MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVAAKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGELQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNLSLHESNKVIITNAGAVKSLVYALKTGTETSKQNAACALMSLALLEENKTSIGVCGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVTAGAVKPLVALVAEQGTGLAEKAMVVLSSLAGIQEGKDAIVEEGGIAALVEAIEDGSLKGKEFAVLTLLQLCVESVRNRGLLVSEGGIPPLVALSQTGSVRAKHKAETLLGYLREPRQVASSSSP

Homology

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BLAST of CsGy6G032560 vs. NCBI nr
Match: XP_004134799.1 (PREDICTED: U-box domain-containing protein 4 [Cucumis sativus] >KGN49052.1 hypothetical protein Csa_6G511670 [Cucumis sativus])

HSP 1 Score: 482.3 bits (1240), Expect = 1.9e-132
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
           AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE
Sbjct: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEFAVLTLLQLCVESVRNRGXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEFAVLTLLQLCVESVRNRGXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEFAVLTLLQLCVESVRNRGXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXKAETLLGYLREPRQVASSSSP 460
           XXXXXXXXXXXXXXXXXXKAETLLGYLREPRQVASSSSP
Sbjct: 421 XXXXXXXXXXXXXXXXXXKAETLLGYLREPRQVASSSSP 459

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BLAST of CsGy6G032560 vs. NCBI nr
Match: XP_008440076.1 (PREDICTED: U-box domain-containing protein 4 [Cucumis melo])

HSP 1 Score: 465.3 bits (1196), Expect = 2.4e-127
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
           AKS CVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE
Sbjct: 61  AKSVCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSL 244
           LSL
Sbjct: 241 LSL 243

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BLAST of CsGy6G032560 vs. NCBI nr
Match: XP_022949882.1 (U-box domain-containing protein 4-like [Cucurbita moschata])

HSP 1 Score: 443.0 bits (1138), Expect = 1.3e-120
Identity = 231/243 (95.06%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPL RNCYSPSSTTSS+ISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLGRNCYSPSSTTSSRISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
            KSG VSENLTDSVIDLRLGELASRSPKW+ QSSEQEQDFLELSHAFSDFSACSSDISGE
Sbjct: 61  GKSGFVSENLTDSVIDLRLGELASRSPKWANQSSEQEQDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLA+LPSMAVVP+REGE  +PEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLANLPSMAVVPKREGEVAEPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAV ALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVSALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSL 244
           LSL
Sbjct: 241 LSL 243

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BLAST of CsGy6G032560 vs. NCBI nr
Match: XP_022977677.1 (U-box domain-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 443.0 bits (1138), Expect = 1.3e-120
Identity = 231/243 (95.06%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPL RNCYSPSSTTSS+ISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLGRNCYSPSSTTSSRISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
            KSG VSENLTDSVIDLRLGELASRSPKW+ QSSEQEQDFLELSHAFSDFSACSSDISGE
Sbjct: 61  GKSGFVSENLTDSVIDLRLGELASRSPKWANQSSEQEQDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLA+LPSMAVVP+REGE  +PEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLANLPSMAVVPKREGEVAEPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAV ALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVSALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSL 244
           LSL
Sbjct: 241 LSL 243

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BLAST of CsGy6G032560 vs. NCBI nr
Match: XP_023003065.1 (U-box domain-containing protein 4-like [Cucurbita maxima])

HSP 1 Score: 442.6 bits (1137), Expect = 1.7e-120
Identity = 228/243 (93.83%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVS+EDSHS+SNRFPL RNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSIEDSHSSSNRFPLGRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
            KSGCVSENLTDSVID+RLGELASRSPKW+ QSSEQE+DFLELSHAFSDFSACSSDISGE
Sbjct: 61  GKSGCVSENLTDSVIDIRLGELASRSPKWASQSSEQEEDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLASLPSMAVV +REG D + EPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLASLPSMAVVSKREGGDAETEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSS+AVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSVAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSL 244
           LSL
Sbjct: 241 LSL 243

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BLAST of CsGy6G032560 vs. TAIR10
Match: AT4G16490.1 (ARM repeat superfamily protein)

HSP 1 Score: 257.3 bits (656), Expect = 1.8e-68
Identity = 154/254 (60.63%), Postives = 176/254 (69.29%), Query Frame = 0


Query: 1   MVSLED--SHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQD-DNSCTFNG 60
           MVS+E+  SHS S RFPLT + Y  SS +++++ R  GRSMRT+RSNF+Q  D SC+F G
Sbjct: 1   MVSVEEPLSHSNSTRFPLTTDFYGSSSPSAARLHRQAGRSMRTVRSNFYQSGDQSCSFVG 60

Query: 61  SVAAKSGCVSENLTDSVIDLRLGELASRSPKW--SKQSSEQEQDFLELSHAFSDFSACSS 120
           S+  KS   SE L+DSVID+RLGELA ++     S                         
Sbjct: 61  SIGDKSEYASEFLSDSVIDMRLGELALKNSNSLNSXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 DISGELQRLASLPSMAVVPQREGEDG----DP--EPEPCLGFLQRENFSTEIIESISPED 180
              GELQRLA LPS        G D     DP  E EPCLGFLQRENFSTEIIE ISPED
Sbjct: 121 XXXGELQRLACLPSPEADRNESGGDNEAEHDPELEREPCLGFLQRENFSTEIIECISPED 180

Query: 181 LQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPW 240
           LQPTVK+CIDGL+SSS+A+KRSAAAKLRLLAKNR+DNRVLIGESGA+ ALIPLLR  DPW
Sbjct: 181 LQPTVKLCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPW 240

Query: 241 TQEHAVTALLNLSL 244
           TQEHAVTALLNLSL
Sbjct: 241 TQEHAVTALLNLSL 254

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BLAST of CsGy6G032560 vs. TAIR10
Match: AT2G23140.1 (RING/U-box superfamily protein with ARM repeat domain)

HSP 1 Score: 79.7 bits (195), Expect = 5.1e-15
Identity = 62/176 (35.23%), Postives = 92/176 (52.27%), Query Frame = 0


Query: 85  RSPKWSKQSSEQE---QDFLELSHAFSDFSACSSDISGELQRLASLPSMAVVPQREGEDG 144
           RSP  +   S +E    D  E S   +  +  SSD SGE++      + +   +R+  D 
Sbjct: 443 RSPSATSTVSNEEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDF 502

Query: 145 DPEPEPCLGFLQR-----------ENFSTEIIESISPE------DLQPTVKICIDGLQSS 204
            P+      F+ R           E   + I+ + S E      +++  VK  ++ L+SS
Sbjct: 503 SPK------FMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSS 562

Query: 205 SIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 241
           S+  +R A A+LRLLAK+  DNR++IG SGA+  L+ LL STD  TQE+AVTALLN
Sbjct: 563 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLN 612

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BLAST of CsGy6G032560 vs. TAIR10
Match: AT3G54850.1 (plant U-box 14)

HSP 1 Score: 73.2 bits (178), Expect = 4.8e-13
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 158 STEIIESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVP 217
           +T+I  S S +  +  V   ++ L + +   +R+AA +LRLLAK   DNRV I E+GA+P
Sbjct: 331 TTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIP 390

Query: 218 ALIPLLRSTDPWTQEHAVTALLNLS 243
            L+ LL S DP TQEH+VTALLNLS
Sbjct: 391 LLVELLSSPDPRTQEHSVTALLNLS 415

[Close]

BLAST of CsGy6G032560 vs. TAIR10
Match: AT3G46510.1 (plant U-box 13)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-11
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 189 KRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNLSL 244
           +RSAA ++RLLAK  +DNRV I E+GA+P L+ LL + D   QEH+VTALLNLS+
Sbjct: 369 QRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSI 423

[Close]

BLAST of CsGy6G032560 vs. TAIR10
Match: AT1G23030.1 (ARM repeat superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10
Identity = 31/70 (44.29%), Postives = 49/70 (70.00%), Query Frame = 0


Query: 174 VKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEH 233
           ++  +  L S S   +R+A +++R L+K  +DNR+LI E+GA+P L+ LL S D  TQE+
Sbjct: 333 IRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQEN 392

Query: 234 AVTALLNLSL 244
           A+T +LNLS+
Sbjct: 393 AITCVLNLSI 402

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BLAST of CsGy6G032560 vs. Swiss-Prot
Match: sp|O22193|PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 9.2e-14
Identity = 62/176 (35.23%), Postives = 92/176 (52.27%), Query Frame = 0


Query: 85  RSPKWSKQSSEQE---QDFLELSHAFSDFSACSSDISGELQRLASLPSMAVVPQREGEDG 144
           RSP  +   S +E    D  E S   +  +  SSD SGE++      + +   +R+  D 
Sbjct: 440 RSPSATSTVSNEEFPRADANENSEESAHATPYSSDASGEIRSGPLAATTSAATRRDLSDF 499

Query: 145 DPEPEPCLGFLQR-----------ENFSTEIIESISPE------DLQPTVKICIDGLQSS 204
            P+      F+ R           E   + I+ + S E      +++  VK  ++ L+SS
Sbjct: 500 SPK------FMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVKKLVEELKSS 559

Query: 205 SIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 241
           S+  +R A A+LRLLAK+  DNR++IG SGA+  L+ LL STD  TQE+AVTALLN
Sbjct: 560 SLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTALLN 609

[Close]

BLAST of CsGy6G032560 vs. Swiss-Prot
Match: sp|Q8VZ40|PUB14_ARATH (U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 8.6e-12
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0


Query: 158 STEIIESISPEDLQPTVKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVP 217
           +T+I  S S +  +  V   ++ L + +   +R+AA +LRLLAK   DNRV I E+GA+P
Sbjct: 331 TTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIP 390

Query: 218 ALIPLLRSTDPWTQEHAVTALLNLS 243
            L+ LL S DP TQEH+VTALLNLS
Sbjct: 391 LLVELLSSPDPRTQEHSVTALLNLS 415

[Close]

BLAST of CsGy6G032560 vs. Swiss-Prot
Match: sp|A2ZLU6|SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 3.6e-10
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 189 KRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 241
           +RSAAA+LRLLAK  ++NR+ I E+GA+P L+ LL S+D  TQEHAVTALLN
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLN 435

[Close]

BLAST of CsGy6G032560 vs. Swiss-Prot
Match: sp|Q0IMG9|SL11_ORYSJ (E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 3.6e-10
Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = 0


Query: 189 KRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 241
           +RSAAA+LRLLAK  ++NR+ I E+GA+P L+ LL S+D  TQEHAVTALLN
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLN 435

[Close]

BLAST of CsGy6G032560 vs. Swiss-Prot
Match: sp|Q9SNC6|PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.2e-10
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 189 KRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLNLSL 244
           +RSAA ++RLLAK  +DNRV I E+GA+P L+ LL + D   QEH+VTALLNLS+
Sbjct: 369 QRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSI 423

[Close]

BLAST of CsGy6G032560 vs. TrEMBL
Match: tr|A0A0A0KL34|A0A0A0KL34_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511670 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
           AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE
Sbjct: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           LSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 LSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEFAVLTLLQLCVESVRNRGXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEFAVLTLLQLCVESVRNRGXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEFAVLTLLQLCVESVRNRGXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXKAETLLGYLREPRQVASSSSP 460
           XXXXXXXXXXXXXXXXXXKAETLLGYLREPRQVASSSSP
Sbjct: 421 XXXXXXXXXXXXXXXXXXKAETLLGYLREPRQVASSSSP 459

[Close]

BLAST of CsGy6G032560 vs. TrEMBL
Match: tr|A0A1S3B089|A0A1S3B089_CUCME (U-box domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103484662 PE=4 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.6e-127
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA
Sbjct: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
           AKS CVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE
Sbjct: 61  AKSVCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG
Sbjct: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN
Sbjct: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240

Query: 241 LSL 244
           LSL
Sbjct: 241 LSL 243

[Close]

BLAST of CsGy6G032560 vs. TrEMBL
Match: tr|A0A199UB46|A0A199UB46_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S065800 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.5e-93
Identity = 188/250 (75.20%), Postives = 213/250 (85.20%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNC--YSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGS 60
           MVSLEDSHS+SNRFPLTRN   Y+PSS +++KISR++GRSMRTIRSN +Q+DNSC    +
Sbjct: 1   MVSLEDSHSSSNRFPLTRNSNFYNPSSASTTKISRHVGRSMRTIRSNLYQNDNSCCSFTT 60

Query: 61  VAAKSGCVSENLTDSVIDLRLGELASR----SPKWSKQSSEQEQDFLELSHAFSDFSACS 120
               S  VSENLT+SVID+RLGEL SR    + K  K SS  +++FL++SHAFSDFSACS
Sbjct: 61  ATDNSAYVSENLTESVIDMRLGELVSRNNDSNDKSGKTSSNSDEEFLDISHAFSDFSACS 120

Query: 121 SDISGELQRLASLPSMAVVPQREG-EDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPT 180
           SDISGELQRLASLPS    P+ +G E  +PEPEPCLGFLQRENFSTEIIESISPEDLQPT
Sbjct: 121 SDISGELQRLASLPSPEHTPKHDGCESAEPEPEPCLGFLQRENFSTEIIESISPEDLQPT 180

Query: 181 VKICIDGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEH 240
           VKIC+DGLQS S+AVKRSAAAKLRLLAKNRSDNR LIGESGA+PALIPLLR +DPWTQEH
Sbjct: 181 VKICVDGLQSPSVAVKRSAAAKLRLLAKNRSDNRALIGESGAIPALIPLLRCSDPWTQEH 240

Query: 241 AVTALLNLSL 244
           AVTALLNLSL
Sbjct: 241 AVTALLNLSL 250

[Close]

BLAST of CsGy6G032560 vs. TrEMBL
Match: tr|A5C9T4|A5C9T4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s2269g00010 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 5.3e-91
Identity = 187/243 (76.95%), Postives = 206/243 (84.77%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLE+SHS SN    +R  Y+ SST+S KI R++GRSMRTIRSN +Q D SC+F    A
Sbjct: 1   MVSLEESHSNSNVLASSRTLYNTSSTSSIKIQRSLGRSMRTIRSNLYQTDRSCSF----A 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWSKQSSEQEQDFLELSHAFSDFSACSSDISGE 120
            KS CVSENLTDSVID+RLGELASRS K S QS  Q++++L+LSHAFSDFSACSSDISGE
Sbjct: 61  DKSSCVSENLTDSVIDMRLGELASRSNK-SAQSPSQDEEYLDLSHAFSDFSACSSDISGE 120

Query: 121 LQRLASLPSMAVVPQREGEDGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICIDG 180
           LQRLASLP    V   + E  DPEPEPCLGFLQRENFSTEIIESISPEDLQPTVK+C+DG
Sbjct: 121 LQRLASLPPSEDV--AKNESSDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKMCVDG 180

Query: 181 LQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTALLN 240
           LQS S+AVKRSAAAKLRLLAKNR+DNR LIGESGAVPALIPLLR TDPWTQEHAVTALLN
Sbjct: 181 LQSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVPALIPLLRCTDPWTQEHAVTALLN 236

Query: 241 LSL 244
           LSL
Sbjct: 241 LSL 236

[Close]

BLAST of CsGy6G032560 vs. TrEMBL
Match: tr|A0A1Q3AW83|A0A1Q3AW83_CEPFO (Arm domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_03425 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.0e-90
Identity = 188/245 (76.73%), Postives = 205/245 (83.67%), Query Frame = 0


Query: 1   MVSLEDSHSTSNRFPLTRNCYSPSSTTSSKISRNIGRSMRTIRSNFFQDDNSCTFNGSVA 60
           MVSLE+SHS SNRFPL RN YSPSS ++SKI R  GRSMRTIRS  +QDD SC+FN S+ 
Sbjct: 1   MVSLEESHSGSNRFPLDRNFYSPSSASTSKIHRQTGRSMRTIRSTLYQDDRSCSFNSSLP 60

Query: 61  AKSGCVSENLTDSVIDLRLGELASRSPKWS-KQSSEQEQDFLELSHAFSDFSACSSDISG 120
            KSG  SENLTDSVID+RLGELA+++   S   SS  E DFL++S AFSDFSACSSDISG
Sbjct: 61  EKSGYASENLTDSVIDMRLGELATKNDNSSVNSSSSNEVDFLDISQAFSDFSACSSDISG 120

Query: 121 ELQRLASLPSMAVVPQREGE-DGDPEPEPCLGFLQRENFSTEIIESISPEDLQPTVKICI 180
           ELQRLASLPS    P++ G    + EPEPC GFLQRE FSTEIIESISPEDLQPTVKICI
Sbjct: 121 ELQRLASLPS----PEKPGNPTPEVEPEPCNGFLQRETFSTEIIESISPEDLQPTVKICI 180

Query: 181 DGLQSSSIAVKRSAAAKLRLLAKNRSDNRVLIGESGAVPALIPLLRSTDPWTQEHAVTAL 240
           DGLQS SIAVKRSAAAKLRLLAKNRSDNR LIGESGAVPALIPLLR +DPWTQEH+VTAL
Sbjct: 181 DGLQSPSIAVKRSAAAKLRLLAKNRSDNRALIGESGAVPALIPLLRCSDPWTQEHSVTAL 240

Query: 241 LNLSL 244
           LNLSL
Sbjct: 241 LNLSL 241

The following BLAST results are available for this feature:

BLAST of CsGy6G032560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134799.1	1.9e-132	100.00	PREDICTED: U-box domain-containing protein 4 [Cucumis sativus] >KGN49052.1 hypot...	[more]
XP_008440076.1	2.4e-127	99.59	PREDICTED: U-box domain-containing protein 4 [Cucumis melo]	[more]
XP_022949882.1	1.3e-120	95.06	U-box domain-containing protein 4-like [Cucurbita moschata]	[more]
XP_022977677.1	1.3e-120	95.06	U-box domain-containing protein 4-like [Cucurbita maxima]	[more]
XP_023003065.1	1.7e-120	93.83	U-box domain-containing protein 4-like [Cucurbita maxima]	[more]

BLAST of CsGy6G032560 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16490.1	1.8e-68	60.63	ARM repeat superfamily protein	[more]
AT2G23140.1	5.1e-15	35.23	RING/U-box superfamily protein with ARM repeat domain	[more]
AT3G54850.1	4.8e-13	49.41	plant U-box 14	[more]
AT3G46510.1	3.4e-11	60.00	plant U-box 13	[more]
AT1G23030.1	1.3e-10	44.29	ARM repeat superfamily protein	[more]

BLAST of CsGy6G032560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O22193\|PUB4_ARATH	9.2e-14	35.23	U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 S...	[more]
sp\|Q8VZ40\|PUB14_ARATH	8.6e-12	49.41	U-box domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=PUB14 PE=1...	[more]
sp\|A2ZLU6\|SL11_ORYSI	3.6e-10	65.38	Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=...	[more]
sp\|Q0IMG9\|SL11_ORYSJ	3.6e-10	65.38	E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica OX=39947 GN=SP...	[more]
sp\|Q9SNC6\|PUB13_ARATH	6.2e-10	60.00	U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1...	[more]

BLAST of CsGy6G032560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KL34\|A0A0A0KL34_CUCSA	1.2e-132	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G511670 PE=4 SV=1	[more]
tr\|A0A1S3B089\|A0A1S3B089_CUCME	1.6e-127	99.59	U-box domain-containing protein 4 OS=Cucumis melo OX=3656 GN=LOC103484662 PE=4 S...	[more]
tr\|A0A199UB46\|A0A199UB46_MANES	2.5e-93	75.20	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_S065800 PE=4 SV=1	[more]
tr\|A5C9T4\|A5C9T4_VITVI	5.3e-91	76.95	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s2269g00010 PE=4 SV=...	[more]
tr\|A0A1Q3AW83\|A0A1Q3AW83_CEPFO	2.0e-90	76.73	Arm domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0342...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR000225	Armadillo

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005488	binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G032560.1	CsGy6G032560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 367..407 e-value: 10.0 score: 13.1 coord: 244..284 e-value: 56.0 score: 7.5 coord: 326..366 e-value: 210.0 score: 2.9 coord: 203..243 e-value: 0.0014 score: 27.9 coord: 409..449 e-value: 26.0 score: 10.0 coord: 285..325 e-value: 0.83 score: 18.7
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 204..242 e-value: 3.1E-8 score: 33.3 coord: 287..325 e-value: 7.8E-6 score: 25.7
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 337..379 score: 9.957
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 214..256 score: 12.547
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 171..329 e-value: 2.0E-31 score: 110.9
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 330..456 e-value: 8.3E-19 score: 69.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 1..459
None	No IPR available	PANTHER	PTHR23315:SF129	ARMADILLO/BETA-CATENIN-LIKE REPEAT-CONTAINING PROTEIN	coord: 1..459
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 171..447

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G032560	Cla014400	Watermelon (97103) v1	cgybwmB468
CsGy6G032560	Csa6G511670	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G032560	MELO3C007441	Melon (DHL92) v3.5.1	cgybmeB445
CsGy6G032560	ClCG01G021420	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G032560	CSPI06G32980	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G032560	CmaCh03G005770	Cucurbita maxima (Rimu)	cgybcmaB831
CsGy6G032560	CmaCh07G003500	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G032560	CmoCh03G006050	Cucurbita moschata (Rifu)	cgybcmoB811
CsGy6G032560	CmoCh07G003410	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G032560	Lsi01G004830	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G032560	Cp4.1LG19g07990	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G032560	Cp4.1LG10g09890	Cucurbita pepo (Zucchini)	cgybcpeB710
CsGy6G032560	MELO3C007441.2	Melon (DHL92) v3.6.1	cgybmedB442
CsGy6G032560	CsaV3_6G048440	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G032560	Cla97C01G020990	Watermelon (97103) v2	cgybwmbB394
CsGy6G032560	Bhi03G000501	Wax gourd	cgybwgoB598
CsGy6G032560	Carg00500	Silver-seed gourd	carcgybB0418
CsGy6G032560	Carg07879	Silver-seed gourd	carcgybB0640

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G032560	Cucumber (Gy14) v2	cgybcgybB036
CsGy6G032560	Cucurbita maxima (Rimu)	cgybcmaB724
CsGy6G032560	Cucurbita maxima (Rimu)	cgybcmaB771
CsGy6G032560	Cucurbita pepo (Zucchini)	cgybcpeB819
CsGy6G032560	Cucumber (Chinese Long) v2	cgybcuB240
CsGy6G032560	Bottle gourd (USVL1VR-Ls)	cgyblsiB407
CsGy6G032560	Melon (DHL92) v3.5.1	cgybmeB396
CsGy6G032560	Wild cucumber (PI 183967)	cgybcpiB249
CsGy6G032560	Watermelon (97103) v2	cgybwmbB396
CsGy6G032560	Wax gourd	cgybwgoB607