Lsi01G004620 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G004620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionOvate transcriptional repressor
Locationchr01 : 3861306 .. 3861791 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGCAGCAGGCTCAAGCCAACAGCGTCAGCAAGAACAGAGATCATACAGAGCCTTGTGCTGTGGTTGCACTTGCAATTGCAGGTTGAGTTTTTCTTCTTCAGAAGAAACAGAAAGCTTCAGCTCTGAGATATTCCCATCAGTTTCCAGCATCGCCCACGCCATGGTTCAGGAGAGGCTCGATCAAATGATAAGGGAAAAACGAGAGATAAGGAATGGTAAAGAAAGAAAGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGATGACCCTAAAGAAGACTTTAGAATTTCAATGATGGAAATGATTTTGGCTAATCGAATTGAGGAGCCAAAGGATCTACGTAACCTCTTGAATTATTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTAAAGGTATTCCATGAGGTTTGTAGCAATTTGTTTTTGGATTGTAAACGCTATTGGTAG

mRNA sequence

ATGAAAGCAGCAGGCTCAAGCCAACAGCGTCAGCAAGAACAGAGATCATACAGAGCCTTGTGCTGTGGTTGCACTTGCAATTGCAGGTTGAGTTTTTCTTCTTCAGAAGAAACAGAAAGCTTCAGCTCTGAGATATTCCCATCAGTTTCCAGCATCGCCCACGCCATGGTTCAGGAGAGGCTCGATCAAATGATAAGGGAAAAACGAGAGATAAGGAATGGTAAAGAAAGAAAGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGATGACCCTAAAGAAGACTTTAGAATTTCAATGATGGAAATGATTTTGGCTAATCGAATTGAGGAGCCAAAGGATCTACGTAACCTCTTGAATTATTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTAAAGGTATTCCATGAGGTTTGTAGCAATTTGTTTTTGGATTGTAAACGCTATTGGTAG

Coding sequence (CDS)

ATGAAAGCAGCAGGCTCAAGCCAACAGCGTCAGCAAGAACAGAGATCATACAGAGCCTTGTGCTGTGGTTGCACTTGCAATTGCAGGTTGAGTTTTTCTTCTTCAGAAGAAACAGAAAGCTTCAGCTCTGAGATATTCCCATCAGTTTCCAGCATCGCCCACGCCATGGTTCAGGAGAGGCTCGATCAAATGATAAGGGAAAAACGAGAGATAAGGAATGGTAAAGAAAGAAAGAAACAGAGAAGTGAAGACACCAAATTTGTTGTAATGGTGGCTATGGAGAAATGCTCTGATGACCCTAAAGAAGACTTTAGAATTTCAATGATGGAAATGATTTTGGCTAATCGAATTGAGGAGCCAAAGGATCTACGTAACCTCTTGAATTATTATATCTCCATGAACTCAGATGAATGTCATGGTGTTATTTTAAAGGTATTCCATGAGGTTTGTAGCAATTTGTTTTTGGATTGTAAACGCTATTGGTAG

Protein sequence

MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQERLDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW
Homology
[Close]
BLAST of Lsi01G004620 vs. Swiss-Prot
Match: OFP9_ARATH (Probable transcription repressor OFP9 OS=Arabidopsis thaliana GN=OFP9 PE=3 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.1e-25
Identity = 64/118 (54.24%), Postives = 89/118 (75.42%), Query Frame = 1 

Query: 48  SVSSIAHAMVQERLDQMIREKRE------IRNGKERKKQRSED-----TKFVVMVAMEKC 107
           S+SS+AH MVQE+L+QMIRE +E      IR  K R+++R  +     TKF+VM+AMEKC
Sbjct: 296 SLSSLAHYMVQEKLEQMIRETQEATHQEKIRQQKMRRRRRRSEGSISSTKFIVMMAMEKC 355

Query: 108 SDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEVCSNLF 155
           S DP++DFR SM+EMI+AN+I+E  +LR+LL YY+SMN  E    IL++F+EVC++LF
Sbjct: 356 SFDPRKDFRDSMVEMIVANKIKEADELRSLLEYYLSMNPREYRSAILEIFYEVCADLF 413

[Close]
BLAST of Lsi01G004620 vs. Swiss-Prot
Match: OFP5_ARATH (Transcription repressor OFP5 OS=Arabidopsis thaliana GN=OFP5 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 92  AMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV 150
           A+ KCS DP++DFR SM+EMI+ N I  P++L+ LL  Y+ +N+DE H +I+ VF +V
Sbjct: 285 AVVKCSSDPQKDFRDSMIEMIMENGINHPEELKELLVCYLRLNTDEYHDMIISVFQQV 342

[Close]
BLAST of Lsi01G004620 vs. Swiss-Prot
Match: OFP3_ARATH (Transcription repressor OFP3 OS=Arabidopsis thaliana GN=OFP3 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-09
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 63  QMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKD 122
           +++R+K+     KER  Q S+    V   A+   S DP++DFR SM+EMI+ N++ E KD
Sbjct: 203 KIVRKKK-----KERTSQVSKKKGVVKSFAIVLSSVDPEKDFRESMVEMIMENKMREQKD 262

Query: 123 LRNLLNYYISMNSDECHGVILKVFHEVCSNL 154
           L +LL  Y+S+NS E H VI+K F     +L
Sbjct: 263 LEDLLACYLSLNSSEYHDVIIKAFENTWLHL 288

[Close]
BLAST of Lsi01G004620 vs. Swiss-Prot
Match: OFP6_ARATH (Transcription repressor OFP6 OS=Arabidopsis thaliana GN=OFP6 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 91  VAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV 150
           VA+EK SDDP  DFR SM++MIL N+I    +LR LL  ++S+NS   HG+I++ F E+
Sbjct: 68  VAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEI 126

[Close]
BLAST of Lsi01G004620 vs. Swiss-Prot
Match: OFP8_ARATH (Transcription repressor OFP8 OS=Arabidopsis thaliana GN=OFP8 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 4.5e-08
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 82  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGV 141
           S D+      A+ K S DP EDFR SM+EMI+  +I  P +L+ LL  ++S+NS + H V
Sbjct: 147 SSDSSKAESFAVVKKSKDPYEDFRTSMVEMIVERQIFAPAELQQLLQCFLSLNSRQHHKV 206

Query: 142 ILKVFHEVCSNLF 155
           I++VF E+ + LF
Sbjct: 207 IVQVFLEIYATLF 219

[Close]
BLAST of Lsi01G004620 vs. TrEMBL
Match: A0A0A0KHR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512880 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 5.0e-67
Identity = 132/148 (89.19%), Postives = 141/148 (95.27%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKAAGS+Q   QEQ +YRALCCGC+CNCRLSFSSSEETESF+S+ FPSVSSIAHAMVQER
Sbjct: 1   MKAAGSTQHHHQEQSAYRALCCGCSCNCRLSFSSSEETESFNSDKFPSVSSIAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           L+QMIREKRE+RNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFR+SM EMILANRIEEP
Sbjct: 61  LEQMIREKREVRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRVSMTEMILANRIEEP 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHE 149
           KDLRNLLNYYISMNSDECHGVI +VFHE
Sbjct: 121 KDLRNLLNYYISMNSDECHGVIFEVFHE 148

[Close]
BLAST of Lsi01G004620 vs. TrEMBL
Match: A0A0D2TLZ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G182600 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.6e-50
Identity = 107/160 (66.88%), Postives = 133/160 (83.12%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKA+   +Q+  +QR  +ALCC    +CRLS SSSEE ES +S+ + S+SS+AHAMVQER
Sbjct: 1   MKASKEHKQQGLQQRGCKALCC----SCRLSVSSSEEAESSNSDRYASISSLAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           LDQMIRE++E R+  ER++Q SE TKF+VMVAMEKCS DP+EDF  SM+EMI ANRI+EP
Sbjct: 61  LDQMIRERQETRHNVERRRQSSEGTKFIVMVAMEKCSYDPREDFSKSMVEMIKANRIQEP 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY 161
           KDLRNLLNYY+SMNS+E HG+IL+VFHEVC+NLFL CKR+
Sbjct: 121 KDLRNLLNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKRH 156

[Close]
BLAST of Lsi01G004620 vs. TrEMBL
Match: A0A151STY5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_004576 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-46
Identity = 106/156 (67.95%), Postives = 126/156 (80.77%), Query Frame = 1 

Query: 7   SQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFS-SEIFPSVSSIAHAMVQERLDQMI 66
           S+Q Q +QR  +ALCC    +CRLS SSSEE ES S S+ FPSVSS+AHAMVQERLDQMI
Sbjct: 4   SKQHQLQQRGCKALCC----SCRLSVSSSEEAESSSASDRFPSVSSLAHAMVQERLDQMI 63

Query: 67  REKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRN 126
           REK E R+ + R++Q  E TKFVVMVAME+ S DP+EDFR SM EMI ANR+++ KDLR+
Sbjct: 64  REKMEARHAERRRQQSREGTKFVVMVAMERSSCDPREDFRESMTEMITANRLQDAKDLRS 123

Query: 127 LLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW 162
           LLNYYISMNSDE H +IL+VFHEVC+NLFL CK +W
Sbjct: 124 LLNYYISMNSDEYHTLILEVFHEVCTNLFLSCKCHW 155

[Close]
BLAST of Lsi01G004620 vs. TrEMBL
Match: V7C725_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G082100g PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 101/161 (62.73%), Postives = 126/161 (78.26%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKA+   +Q Q +QR  +ALCC    +CR S SSSEE ES +S+ FPSVSS+AHAMVQER
Sbjct: 1   MKASKQQKQNQVQQRGCKALCC----SCRFSVSSSEEAESSASDRFPSVSSLAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           LDQ+IRE+ E  + + R++Q  E TKFVVMVAMEK S DP+ DFR SMMEMI ANR+++ 
Sbjct: 61  LDQIIRERMEASHAERRRQQSREGTKFVVMVAMEKSSYDPRVDFRESMMEMITANRLQDA 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW 162
           KDLR+LLNYYISMN+ E H +IL++FHEVC+NLFL CK +W
Sbjct: 121 KDLRSLLNYYISMNATEYHSLILELFHEVCTNLFLPCKCHW 157

[Close]
BLAST of Lsi01G004620 vs. TrEMBL
Match: B9N8G2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s00540g PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45
Identity = 99/158 (62.66%), Postives = 129/158 (81.65%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MK +   ++++ +QR  +A CC    +CRLS SSSEE ES + + F S+SS+AHAMVQER
Sbjct: 1   MKESRVDKKQKLQQRGCKAFCC----SCRLSVSSSEEAESSNPDRFASISSLAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           LDQMIRE++E R  + R++ RS+ TKF+VMVAMEK S DP+EDFR SM+EMI+ANR++EP
Sbjct: 61  LDQMIRERQEARQRERRRRLRSDGTKFIVMVAMEKSSYDPREDFRESMVEMIMANRLQEP 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCK 159
           KDLR+LLNYY+SMNS+E HG+IL+VFHEVC+NLFL CK
Sbjct: 121 KDLRSLLNYYMSMNSEEYHGMILEVFHEVCTNLFLCCK 154

[Close]
BLAST of Lsi01G004620 vs. TAIR10
Match: AT2G36026.1 (AT2G36026.1 Ovate family protein)

HSP 1 Score: 67.4 bits (163), Expect = 9.2e-12
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1 

Query: 82  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGV 141
           S  T     VA+EK SDDP  DFR SM++MIL N I    DLR LL+ ++S+N    HG+
Sbjct: 79  SSATPSAAAVAVEKDSDDPYLDFRQSMLQMILENEIYSKNDLRELLHCFLSLNEPYHHGI 138

Query: 142 ILKVFHEVCSNLFLDCKR 160
           I++ F E+   +F   KR
Sbjct: 139 IIRAFSEIWDGVFSAAKR 156

[Close]
BLAST of Lsi01G004620 vs. TAIR10
Match: AT4G18830.1 (AT4G18830.1 ovate family protein 5)

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-11
Identity = 29/58 (50.00%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 92  AMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV 150
           A+ KCS DP++DFR SM+EMI+ N I  P++L+ LL  Y+ +N+DE H +I+ VF +V
Sbjct: 285 AVVKCSSDPQKDFRDSMIEMIMENGINHPEELKELLVCYLRLNTDEYHDMIISVFQQV 342

[Close]
BLAST of Lsi01G004620 vs. TAIR10
Match: AT5G58360.1 (AT5G58360.1 ovate family protein 3)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-10
Identity = 38/91 (41.76%), Postives = 56/91 (61.54%), Query Frame = 1 

Query: 63  QMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKD 122
           +++R+K+     KER  Q S+    V   A+   S DP++DFR SM+EMI+ N++ E KD
Sbjct: 203 KIVRKKK-----KERTSQVSKKKGVVKSFAIVLSSVDPEKDFRESMVEMIMENKMREQKD 262

Query: 123 LRNLLNYYISMNSDECHGVILKVFHEVCSNL 154
           L +LL  Y+S+NS E H VI+K F     +L
Sbjct: 263 LEDLLACYLSLNSSEYHDVIIKAFENTWLHL 288

[Close]
BLAST of Lsi01G004620 vs. TAIR10
Match: AT3G52525.1 (AT3G52525.1 ovate family protein 6)

HSP 1 Score: 60.8 bits (146), Expect = 8.6e-10
Identity = 30/59 (50.85%), Postives = 42/59 (71.19%), Query Frame = 1 

Query: 91  VAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGVILKVFHEV 150
           VA+EK SDDP  DFR SM++MIL N+I    +LR LL  ++S+NS   HG+I++ F E+
Sbjct: 68  VAVEKDSDDPYLDFRQSMLQMILENQIYSKDELRELLQCFLSLNSHYHHGIIVRAFSEI 126

[Close]
BLAST of Lsi01G004620 vs. TAIR10
Match: AT5G19650.1 (AT5G19650.1 ovate family protein 8)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-09
Identity = 32/73 (43.84%), Postives = 47/73 (64.38%), Query Frame = 1 

Query: 82  SEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRNLLNYYISMNSDECHGV 141
           S D+      A+ K S DP EDFR SM+EMI+  +I  P +L+ LL  ++S+NS + H V
Sbjct: 147 SSDSSKAESFAVVKKSKDPYEDFRTSMVEMIVERQIFAPAELQQLLQCFLSLNSRQHHKV 206

Query: 142 ILKVFHEVCSNLF 155
           I++VF E+ + LF
Sbjct: 207 IVQVFLEIYATLF 219

[Close]
BLAST of Lsi01G004620 vs. NCBI nr
Match: gi|700193869|gb|KGN49073.1| (hypothetical protein Csa_6G512880 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 7.2e-67
Identity = 132/148 (89.19%), Postives = 141/148 (95.27%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKAAGS+Q   QEQ +YRALCCGC+CNCRLSFSSSEETESF+S+ FPSVSSIAHAMVQER
Sbjct: 1   MKAAGSTQHHHQEQSAYRALCCGCSCNCRLSFSSSEETESFNSDKFPSVSSIAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           L+QMIREKRE+RNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFR+SM EMILANRIEEP
Sbjct: 61  LEQMIREKREVRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRVSMTEMILANRIEEP 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHE 149
           KDLRNLLNYYISMNSDECHGVI +VFHE
Sbjct: 121 KDLRNLLNYYISMNSDECHGVIFEVFHE 148

[Close]
BLAST of Lsi01G004620 vs. NCBI nr
Match: gi|823218352|ref|XP_012441836.1| (PREDICTED: probable transcription repressor OFP9 [Gossypium raimondii])

HSP 1 Score: 205.3 bits (521), Expect = 8.0e-50
Identity = 107/160 (66.88%), Postives = 133/160 (83.12%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKA+   +Q+  +QR  +ALCC    +CRLS SSSEE ES +S+ + S+SS+AHAMVQER
Sbjct: 1   MKASKEHKQQGLQQRGCKALCC----SCRLSVSSSEEAESSNSDRYASISSLAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           LDQMIRE++E R+  ER++Q SE TKF+VMVAMEKCS DP+EDF  SM+EMI ANRI+EP
Sbjct: 61  LDQMIRERQETRHNVERRRQSSEGTKFIVMVAMEKCSYDPREDFSKSMVEMIKANRIQEP 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRY 161
           KDLRNLLNYY+SMNS+E HG+IL+VFHEVC+NLFL CKR+
Sbjct: 121 KDLRNLLNYYVSMNSEEYHGIILEVFHEVCTNLFLCCKRH 156

[Close]
BLAST of Lsi01G004620 vs. NCBI nr
Match: gi|1012347085|gb|KYP58277.1| (hypothetical protein KK1_004576 [Cajanus cajan])

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46
Identity = 106/156 (67.95%), Postives = 126/156 (80.77%), Query Frame = 1 

Query: 7   SQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFS-SEIFPSVSSIAHAMVQERLDQMI 66
           S+Q Q +QR  +ALCC    +CRLS SSSEE ES S S+ FPSVSS+AHAMVQERLDQMI
Sbjct: 4   SKQHQLQQRGCKALCC----SCRLSVSSSEEAESSSASDRFPSVSSLAHAMVQERLDQMI 63

Query: 67  REKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEPKDLRN 126
           REK E R+ + R++Q  E TKFVVMVAME+ S DP+EDFR SM EMI ANR+++ KDLR+
Sbjct: 64  REKMEARHAERRRQQSREGTKFVVMVAMERSSCDPREDFRESMTEMITANRLQDAKDLRS 123

Query: 127 LLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW 162
           LLNYYISMNSDE H +IL+VFHEVC+NLFL CK +W
Sbjct: 124 LLNYYISMNSDEYHTLILEVFHEVCTNLFLSCKCHW 155

[Close]
BLAST of Lsi01G004620 vs. NCBI nr
Match: gi|951000322|ref|XP_014506771.1| (PREDICTED: probable transcription repressor OFP9 [Vigna radiata var. radiata])

HSP 1 Score: 190.7 bits (483), Expect = 2.0e-45
Identity = 103/158 (65.19%), Postives = 126/158 (79.75%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKA+   +Q Q +QR  +ALCC    +CR S SSSEE ES +S+ FPSVSS+AHAMVQER
Sbjct: 1   MKASKQQKQNQLQQRGCKALCC----SCRFSVSSSEEAESSASDRFPSVSSLAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           LDQMIRE+ E  + + R++Q SE TKFVVMVAMEK S DP+ DFR SMMEMI ANR+++ 
Sbjct: 61  LDQMIRERMEASHVERRRQQSSEGTKFVVMVAMEKSSYDPRLDFRESMMEMITANRLQDA 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCK 159
           KDLR+LLNYYISMNS++ H +IL+VFHEVC+NLFL CK
Sbjct: 121 KDLRSLLNYYISMNSNQYHSLILEVFHEVCTNLFLSCK 154

[Close]
BLAST of Lsi01G004620 vs. NCBI nr
Match: gi|593781905|ref|XP_007153993.1| (hypothetical protein PHAVU_003G082100g [Phaseolus vulgaris])

HSP 1 Score: 190.3 bits (482), Expect = 2.7e-45
Identity = 101/161 (62.73%), Postives = 126/161 (78.26%), Query Frame = 1 

Query: 1   MKAAGSSQQRQQEQRSYRALCCGCTCNCRLSFSSSEETESFSSEIFPSVSSIAHAMVQER 60
           MKA+   +Q Q +QR  +ALCC    +CR S SSSEE ES +S+ FPSVSS+AHAMVQER
Sbjct: 1   MKASKQQKQNQVQQRGCKALCC----SCRFSVSSSEEAESSASDRFPSVSSLAHAMVQER 60

Query: 61  LDQMIREKREIRNGKERKKQRSEDTKFVVMVAMEKCSDDPKEDFRISMMEMILANRIEEP 120
           LDQ+IRE+ E  + + R++Q  E TKFVVMVAMEK S DP+ DFR SMMEMI ANR+++ 
Sbjct: 61  LDQIIRERMEASHAERRRQQSREGTKFVVMVAMEKSSYDPRVDFRESMMEMITANRLQDA 120

Query: 121 KDLRNLLNYYISMNSDECHGVILKVFHEVCSNLFLDCKRYW 162
           KDLR+LLNYYISMN+ E H +IL++FHEVC+NLFL CK +W
Sbjct: 121 KDLRSLLNYYISMNATEYHSLILELFHEVCTNLFLPCKCHW 157

The following BLAST results are available for this feature:
BLAST of Lsi01G004620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
OFP9_ARATH3.1e-2554.24Probable transcription repressor OFP9 OS=Arabidopsis thaliana GN=OFP9 PE=3 SV=2[more]
OFP5_ARATH1.4e-0950.00Transcription repressor OFP5 OS=Arabidopsis thaliana GN=OFP5 PE=1 SV=1[more]
OFP3_ARATH6.9e-0941.76Transcription repressor OFP3 OS=Arabidopsis thaliana GN=OFP3 PE=1 SV=1[more]
OFP6_ARATH1.5e-0850.85Transcription repressor OFP6 OS=Arabidopsis thaliana GN=OFP6 PE=1 SV=1[more]
OFP8_ARATH4.5e-0843.84Transcription repressor OFP8 OS=Arabidopsis thaliana GN=OFP8 PE=2 SV=1[more]
BLAST of Lsi01G004620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHR6_CUCSA5.0e-6789.19Uncharacterized protein OS=Cucumis sativus GN=Csa_6G512880 PE=4 SV=1[more]
A0A0D2TLZ4_GOSRA5.6e-5066.88Uncharacterized protein OS=Gossypium raimondii GN=B456_009G182600 PE=4 SV=1[more]
A0A151STY5_CAJCA1.3e-4667.95Uncharacterized protein OS=Cajanus cajan GN=KK1_004576 PE=4 SV=1[more]
V7C725_PHAVU1.9e-4562.73Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G082100g PE=4 SV=1[more]
B9N8G2_POPTR2.4e-4562.66Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s00540g PE=4 SV=1[more]
BLAST of Lsi01G004620 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G36026.19.2e-1244.87 Ovate family protein[more]
AT4G18830.17.8e-1150.00 ovate family protein 5[more]
AT5G58360.13.9e-1041.76 ovate family protein 3[more]
AT3G52525.18.6e-1050.85 ovate family protein 6[more]
AT5G19650.12.5e-0943.84 ovate family protein 8[more]
BLAST of Lsi01G004620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193869|gb|KGN49073.1|7.2e-6789.19hypothetical protein Csa_6G512880 [Cucumis sativus][more]
gi|823218352|ref|XP_012441836.1|8.0e-5066.88PREDICTED: probable transcription repressor OFP9 [Gossypium raimondii][more]
gi|1012347085|gb|KYP58277.1|1.8e-4667.95hypothetical protein KK1_004576 [Cajanus cajan][more]
gi|951000322|ref|XP_014506771.1|2.0e-4565.19PREDICTED: probable transcription repressor OFP9 [Vigna radiata var. radiata][more]
gi|593781905|ref|XP_007153993.1|2.7e-4562.73hypothetical protein PHAVU_003G082100g [Phaseolus vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006458Ovate_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0045892 negative regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G004620.1Lsi01G004620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006458Ovate protein family, C-terminalPFAMPF04844Ovatecoord: 97..154
score: 6.1
IPR006458Ovate protein family, C-terminalTIGRFAMsTIGR01568TIGR01568coord: 91..154
score: 1.5
IPR006458Ovate protein family, C-terminalPROFILEPS51754OVATEcoord: 93..152
score: 15
NoneNo IPR availableunknownCoilCoilcoord: 61..81
scor
NoneNo IPR availablePANTHERPTHR33057FAMILY NOT NAMEDcoord: 6..158
score: 1.1
NoneNo IPR availablePANTHERPTHR33057:SF13SUBFAMILY NOT NAMEDcoord: 6..158
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi01G004620Csa6G512880Cucumber (Chinese Long) v2culsiB434
Lsi01G004620CSPI06G33200Wild cucumber (PI 183967)cpilsiB439
Lsi01G004620Cucsa.044910Cucumber (Gy14) v1cgylsiB022
Lsi01G004620CmaCh03G005590Cucurbita maxima (Rimu)cmalsiB597
Lsi01G004620CmaCh07G003340Cucurbita maxima (Rimu)cmalsiB786
Lsi01G004620CmoCh03G005850Cucurbita moschata (Rifu)cmolsiB582
Lsi01G004620Cla014417Watermelon (97103) v1lsiwmB144
Lsi01G004620MELO3C007422Melon (DHL92) v3.5.1lsimeB149
Lsi01G004620ClCG01G021620Watermelon (Charleston Gray)lsiwcgB127
Lsi01G004620MELO3C007422.2Melon (DHL92) v3.6.1lsimedB156
Lsi01G004620Cla97C01G021220Watermelon (97103) v2lsiwmbB115
Lsi01G004620Bhi03G000479Wax gourdlsiwgoB168
Lsi01G004620Cp4.1LG19g08040Cucurbita pepo (Zucchini)cpelsiB396
Lsi01G004620Cp4.1LG10g09760Cucurbita pepo (Zucchini)cpelsiB054
Lsi01G004620CsGy1G014840Cucumber (Gy14) v2cgyblsiB014
Lsi01G004620CsGy6G032780Cucumber (Gy14) v2cgyblsiB398
Lsi01G004620Carg07862Silver-seed gourdcarlsiB585
Lsi01G004620Carg13670Silver-seed gourdcarlsiB846
Lsi01G004620CsaV3_1G015160Cucumber (Chinese Long) v3cuclsiB017
Lsi01G004620CsaV3_6G048660Cucumber (Chinese Long) v3cuclsiB462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi01G004620Watermelon (97103) v2lsiwmbB112
Lsi01G004620Bottle gourd (USVL1VR-Ls)lsilsiB064
Lsi01G004620Cucurbita maxima (Rimu)cmalsiB367
Lsi01G004620Cucurbita moschata (Rifu)cmolsiB774
Lsi01G004620Cucurbita pepo (Zucchini)cpelsiB413
Lsi01G004620Melon (DHL92) v3.5.1lsimeB129